View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19266_low_45 (Length: 341)
Name: NF19266_low_45
Description: NF19266
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19266_low_45 |
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Alignment Details
Target: chr2 (Bit Score: 266; Significance: 1e-148; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 266; E-Value: 1e-148
Query Start/End: Original strand, 15 - 326
Target Start/End: Original strand, 11034448 - 11034760
Alignment:
| Q |
15 |
aattggagaaaatgtttgattgctttattttataannnnnnnnn-gggtacatacttccgtatataataacactctaataattagaatgattatttaaaa |
113 |
Q |
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| T |
11034448 |
aattggagaaaatgtttgattgctttattttataaatttttttttgggtacatacttccgtatataatagcactctaataattagattgattatttaaaa |
11034547 |
T |
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| Q |
114 |
agttaaatggtaacgtactctctctatatatacatatcttttgcagtgactataagttaaaatatgtaaattaaaatgtcactctcatctcatttaatta |
213 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
11034548 |
agttaaatggtaacgtactctctctatatatacatatcttttgcagtgactataagttaaaatatgtaaattaaaatgtcactctcatctcatttaatta |
11034647 |
T |
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| Q |
214 |
gctgagaacctttgaccatgggattgataggatccaattccgacaaatttggataccagaatatctcctgaaaaatgactgatcgttaatgaaaaatcct |
313 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |
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| T |
11034648 |
gctgagaacctttgaccatgggattgataggatccaattccgacaaatttggataccagaatatctcctaaaaaatgactgatcgttaatgaaaaatcct |
11034747 |
T |
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| Q |
314 |
caactaaaatatg |
326 |
Q |
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||||||||||||| |
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| T |
11034748 |
caactaaaatatg |
11034760 |
T |
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