View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19266_low_46 (Length: 341)
Name: NF19266_low_46
Description: NF19266
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19266_low_46 |
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Alignment Details
Target: chr8 (Bit Score: 284; Significance: 1e-159; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 284; E-Value: 1e-159
Query Start/End: Original strand, 20 - 323
Target Start/End: Original strand, 32641238 - 32641541
Alignment:
| Q |
20 |
ttcccaacttgcctataatactccttcctcttaacaaacctctccaaatcctccataacaaactcctttaaattgcgatcaagtgcaagtgtatcaaacg |
119 |
Q |
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| T |
32641238 |
ttcccaacttgcctataatactccttcctcttaacaaacctctccaaatcctccataacaaactcctttaaatcacgatcaagtgcaagtgtatcaaacg |
32641337 |
T |
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| Q |
120 |
tcgttggatgatccaacgtaatccccagccatgcgtcgttaagattcccatatagattctgtatatcaatggtgaatatcttcaatgctttcacttcttg |
219 |
Q |
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|||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32641338 |
tcgttggatgatccaacgtagtccccagccacgcgtcgttaagattcccatatagattctgtatatcaatggtgaatatcttcaatgctttcacttcttg |
32641437 |
T |
|
| Q |
220 |
tttcttcgatcttgctttttcgagaataaaaggaatgtagctttttagaaccagctccttgtattttctgttgaaagttaactccaatgaacgtacttct |
319 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32641438 |
tttcttcgatcttgctttttcgagaataaaaggaatgtagctttttagaaccatctccttgtattttctgttgaaagttaactccaatgaacgtacttct |
32641537 |
T |
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| Q |
320 |
gact |
323 |
Q |
| |
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|||| |
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| T |
32641538 |
gact |
32641541 |
T |
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