View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19266_low_77 (Length: 260)

Name: NF19266_low_77
Description: NF19266
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19266_low_77
NF19266_low_77
[»] chr7 (25 HSPs)
chr7 (21-260)||(28421123-28421374)
chr7 (18-260)||(3817472-3817724)
chr7 (18-260)||(3811330-3811582)
chr7 (21-260)||(351533-351781)
chr7 (30-260)||(339127-339366)
chr7 (23-260)||(5979340-5979591)
chr7 (21-181)||(20238785-20238946)
chr7 (21-177)||(15843785-15843942)
chr7 (21-177)||(15860894-15861051)
chr7 (54-260)||(35148204-35148422)
chr7 (77-260)||(22742149-22742343)
chr7 (77-260)||(5849276-5849469)
chr7 (22-260)||(43539723-43539979)
chr7 (54-182)||(35150736-35150866)
chr7 (116-258)||(26383417-26383569)
chr7 (77-165)||(26380935-26381023)
chr7 (24-152)||(7608306-7608437)
chr7 (182-260)||(35152864-35152942)
chr7 (87-177)||(18656883-18656973)
chr7 (76-165)||(3677876-3677965)
chr7 (77-122)||(12803893-12803938)
chr7 (77-110)||(24690848-24690881)
chr7 (182-245)||(7608186-7608251)
chr7 (21-63)||(42767459-42767501)
chr7 (192-245)||(42767547-42767602)
[»] chr5 (18 HSPs)
chr5 (21-260)||(12686343-12686594)
chr5 (21-260)||(12692445-12692696)
chr5 (28-260)||(32097193-32097438)
chr5 (21-260)||(28525550-28525799)
chr5 (28-260)||(32094392-32094637)
chr5 (21-260)||(28531646-28531895)
chr5 (18-260)||(41297025-41297281)
chr5 (23-245)||(7389713-7389948)
chr5 (46-260)||(14609916-14610139)
chr5 (77-259)||(19059991-19060185)
chr5 (77-245)||(19066332-19066512)
chr5 (54-260)||(30772026-30772246)
chr5 (58-245)||(30384586-30384784)
chr5 (77-260)||(20499884-20500078)
chr5 (89-180)||(26318492-26318582)
chr5 (83-170)||(26509696-26509781)
chr5 (98-173)||(33753476-33753551)
chr5 (77-110)||(8706639-8706672)
[»] scaffold0208 (2 HSPs)
scaffold0208 (21-260)||(6266-6518)
scaffold0208 (22-260)||(12139-12390)
[»] chr3 (33 HSPs)
chr3 (21-260)||(11839889-11840141)
chr3 (21-260)||(10244498-10244750)
chr3 (21-260)||(42191384-42191636)
chr3 (21-260)||(42197326-42197578)
chr3 (21-260)||(10238376-10238628)
chr3 (21-260)||(10769133-10769383)
chr3 (21-260)||(49151358-49151607)
chr3 (21-260)||(49157425-49157674)
chr3 (21-260)||(17055957-17056207)
chr3 (21-245)||(38449227-38449464)
chr3 (21-245)||(38455714-38455951)
chr3 (21-245)||(8331546-8331782)
chr3 (21-260)||(10760814-10761064)
chr3 (21-260)||(30051266-30051514)
chr3 (21-260)||(55003576-55003817)
chr3 (79-260)||(26429639-26429833)
chr3 (58-156)||(13837534-13837632)
chr3 (77-258)||(48128260-48128451)
chr3 (21-133)||(11846227-11846340)
chr3 (77-260)||(28964626-28964811)
chr3 (54-221)||(13444840-13445020)
chr3 (54-181)||(53069254-53069373)
chr3 (77-181)||(12108891-12108990)
chr3 (133-241)||(13367114-13367233)
chr3 (208-260)||(17601897-17601949)
chr3 (90-181)||(2982458-2982549)
chr3 (203-245)||(11846335-11846377)
chr3 (77-119)||(24643773-24643815)
chr3 (77-158)||(34300348-34300429)
chr3 (80-245)||(46656439-46656610)
chr3 (207-245)||(23138779-23138817)
chr3 (181-241)||(9760481-9760543)
chr3 (21-56)||(17593446-17593481)
[»] chr1 (17 HSPs)
chr1 (21-260)||(25381699-25381951)
chr1 (21-245)||(25387668-25387905)
chr1 (18-260)||(31051290-31051543)
chr1 (21-260)||(34739732-34739981)
chr1 (21-260)||(50305941-50306185)
chr1 (52-260)||(1077988-1078209)
chr1 (18-260)||(31057790-31058043)
chr1 (22-260)||(8093011-8093259)
chr1 (77-258)||(44409748-44409940)
chr1 (77-241)||(24926981-24927157)
chr1 (77-238)||(38152184-38152356)
chr1 (88-161)||(24963940-24964013)
chr1 (23-260)||(27954907-27955158)
chr1 (208-260)||(12183975-12184027)
chr1 (219-260)||(25275421-25275462)
chr1 (88-135)||(12183820-12183867)
chr1 (96-165)||(33458149-33458218)
[»] chr4 (27 HSPs)
chr4 (21-260)||(24287731-24287982)
chr4 (21-245)||(10733516-10733750)
chr4 (21-245)||(10947285-10947519)
chr4 (21-245)||(10739503-10739737)
chr4 (21-245)||(10953272-10953506)
chr4 (21-245)||(6257369-6257605)
chr4 (21-260)||(48166924-48167174)
chr4 (21-260)||(48160705-48160955)
chr4 (21-240)||(33458431-33458662)
chr4 (21-240)||(33461556-33461787)
chr4 (77-260)||(26957023-26957217)
chr4 (18-260)||(44831773-44832028)
chr4 (22-171)||(49976432-49976585)
chr4 (21-118)||(10733410-10733507)
chr4 (21-118)||(10947179-10947276)
chr4 (78-260)||(50168341-50168532)
chr4 (126-260)||(26971824-26971968)
chr4 (78-181)||(50155793-50155897)
chr4 (59-181)||(4632216-4632339)
chr4 (46-147)||(35177666-35177769)
chr4 (77-152)||(3769434-3769509)
chr4 (87-161)||(19686551-19686625)
chr4 (76-154)||(32284542-32284620)
chr4 (79-152)||(17627002-17627075)
chr4 (76-176)||(33045085-33045185)
chr4 (182-256)||(35177544-35177620)
chr4 (208-260)||(28704276-28704328)
[»] chr2 (21 HSPs)
chr2 (21-260)||(13455843-13456095)
chr2 (21-260)||(13461784-13462036)
chr2 (21-260)||(36750158-36750410)
chr2 (18-260)||(28683106-28683358)
chr2 (23-245)||(44716971-44717206)
chr2 (21-245)||(30965086-30965323)
chr2 (21-260)||(31002122-31002372)
chr2 (21-260)||(31008100-31008350)
chr2 (21-260)||(13149848-13150103)
chr2 (71-260)||(35084893-35085095)
chr2 (71-260)||(35090866-35091068)
chr2 (77-259)||(23343300-23343493)
chr2 (77-166)||(35438925-35439014)
chr2 (82-260)||(11048776-11048968)
chr2 (79-245)||(19879353-19879536)
chr2 (182-245)||(35439706-35439771)
chr2 (78-140)||(29034697-29034759)
chr2 (182-245)||(7771522-7771586)
chr2 (207-245)||(35442195-35442233)
chr2 (182-259)||(23284690-23284769)
chr2 (77-139)||(29833079-29833142)
[»] chr8 (19 HSPs)
chr8 (18-260)||(32890632-32890887)
chr8 (18-260)||(32896756-32897011)
chr8 (21-260)||(36818716-36818967)
chr8 (21-260)||(5542324-5542574)
chr8 (20-260)||(42993166-42993415)
chr8 (21-260)||(10705584-10705833)
chr8 (21-260)||(9935027-9935274)
chr8 (21-260)||(10699775-10700025)
chr8 (21-181)||(14417776-14417936)
chr8 (56-260)||(22219926-22220141)
chr8 (77-260)||(42033543-42033740)
chr8 (77-181)||(1883039-1883143)
chr8 (18-260)||(39735712-39735952)
chr8 (77-181)||(39727528-39727633)
chr8 (162-259)||(1883158-1883257)
chr8 (77-161)||(1171215-1171285)
chr8 (204-260)||(39727644-39727698)
chr8 (207-260)||(17954252-17954305)
chr8 (204-245)||(14417720-14417761)
[»] chr6 (16 HSPs)
chr6 (18-260)||(4580482-4580737)
chr6 (21-260)||(25343369-25343620)
chr6 (21-260)||(25353955-25354207)
chr6 (21-245)||(8650967-8651204)
chr6 (21-245)||(21191030-21191270)
chr6 (49-260)||(31756410-31756632)
chr6 (77-260)||(21197250-21197454)
chr6 (77-245)||(21770787-21770965)
chr6 (84-245)||(21783545-21783726)
chr6 (84-245)||(21789768-21789949)
chr6 (77-258)||(17581384-17581572)
chr6 (80-241)||(28728047-28728218)
chr6 (96-178)||(30905821-30905902)
chr6 (76-179)||(20745394-20745497)
chr6 (204-255)||(12801899-12801950)
chr6 (21-59)||(32035450-32035488)
[»] scaffold0012 (1 HSPs)
scaffold0012 (21-260)||(173054-173303)
[»] scaffold0363 (2 HSPs)
scaffold0363 (21-181)||(783-943)
scaffold0363 (204-245)||(958-999)
[»] scaffold0440 (1 HSPs)
scaffold0440 (21-260)||(1358-1601)
[»] scaffold1114 (2 HSPs)
scaffold1114 (77-150)||(950-1023)
scaffold1114 (130-245)||(822-949)
[»] scaffold0236 (1 HSPs)
scaffold0236 (21-86)||(5465-5530)
[»] scaffold0185 (2 HSPs)
scaffold0185 (182-260)||(5713-5792)
scaffold0185 (22-135)||(5826-5942)
[»] scaffold0064 (1 HSPs)
scaffold0064 (182-245)||(14032-14097)
[»] scaffold0085 (1 HSPs)
scaffold0085 (96-177)||(38265-38347)


Alignment Details
Target: chr7 (Bit Score: 194; Significance: 1e-105; HSPs: 25)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 21 - 260
Target Start/End: Original strand, 28421123 - 28421374
Alignment:
Q  21 ccctctcatcaacaacgataaccatagagaggagatgatctgaaacgcacaatagagttagcggcggctgatttggttcttcctcaaccggtacctttat 120  Q
    |||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28421123 ccctctcatcaacaacgataaccaaagagaggagatgatctgaaacacacaatagagttagcggcggctgatttggttcttcctcaaccggtacctttat 28421222  T
Q  121 gccttaagttctcttcagatggggagaagagagagtttgccgtgtacggtgtattggggac----------tttatattggatggccattagg--ttccc 208  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||          ||||||||||||||||||||||  |||||    
T  28421223 gcctcaagttctcttcagatggggagaagagagagtttgccgtgtacggtgtattggggaccatagcctcttttatattggatggccattagggtttccc 28421322  T
Q  209 attattccgttaatgggccatccggacatccactcatgttgagtccatatca 260  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28421323 attattccgttaatgggccatccggacatccactcatgttgagtccatatca 28421374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 170; E-Value: 3e-91
Query Start/End: Original strand, 18 - 260
Target Start/End: Original strand, 3817472 - 3817724
Alignment:
Q  18 caaccctctcatcaacaacgataaccatagagaggagatgatctgaaacgcacaatagagttagcggcggctgatttggttcttcctcaaccggtacctt 117  Q
    ||||||||||||||||||||||||||| |||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||    
T  3817472 caaccctctcatcaacaacgataaccaaagagagaagatgatctgaaacacacaatagagttagcggcggctgatttggttcttcctcaaccagtacctt 3817571  T
Q  118 tatgccttaagttctcttcagatggggagaagagagagtttgccgtgtacggtgtattggggac----------tttatattggatggccattagg--tt 205  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||          ||||||||||||| ||||||||  ||    
T  3817572 tatgcctcaagttctcttcagatggggagaagagagagtttgccgtgtacggtatattggggaccatagcctcttttatattggatgaccattagggttt 3817671  T
Q  206 cccattattccgttaatgggccatccggacatccactcatgttgagtccatatca 260  Q
    |||||||||||||||||||||||||||||||||||||||  ||||||||||||||    
T  3817672 cccattattccgttaatgggccatccggacatccactca--ttgagtccatatca 3817724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 166; E-Value: 6e-89
Query Start/End: Original strand, 18 - 260
Target Start/End: Original strand, 3811330 - 3811582
Alignment:
Q  18 caaccctctcatcaacaacgataaccatagagaggagatgatctgaaacgcacaatagagttagcggcggctgatttggttcttcctcaaccggtacctt 117  Q
    ||||||||||||||||||||||||| | |||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||    
T  3811330 caaccctctcatcaacaacgataacaaaagagagaagatgatctgaaacacacaatagagttagcggcggctgatttggttcttcctcaaccagtacctt 3811429  T
Q  118 tatgccttaagttctcttcagatggggagaagagagagtttgccgtgtacggtgtattggggac----------tttatattggatggccattagg--tt 205  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||          ||||||||||||| ||||||||  ||    
T  3811430 tatgcctcaagttctcttcagatggggagaagagagagtttgccgtgtacggtatattggggaccatagcctcttttatattggatgaccattagggttt 3811529  T
Q  206 cccattattccgttaatgggccatccggacatccactcatgttgagtccatatca 260  Q
    |||||||||||||||||||||||||||||||||||||||  ||||||||||||||    
T  3811530 cccattattccgttaatgggccatccggacatccactca--ttgagtccatatca 3811582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 21 - 260
Target Start/End: Complemental strand, 351781 - 351533
Alignment:
Q  21 ccctctcatcaacaacgataaccatagagaggagatgatctgaaacgcacaatagagttagcggcggctgatttggttcttcctcaaccggtacctttat 120  Q
    |||||||||||||||||||||||| | ||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  351781 ccctctcatcaacaacgataaccaaa-agaggagatgatctgaaacacacaatagagttagcggcggctgatttgattcttcctcaaccggtacctttat 351683  T
Q  121 gccttaagttctcttcagatggggagaagagagagtttgccgtgtacggtgtattggggac----------tttatattggatggccattagg--ttccc 208  Q
    |||| |||||||||||||||||||||||||||||||||| |||||||||| ||||||||||          ||||||||||||||||||||||  |||||    
T  351682 gcctcaagttctcttcagatggggagaagagagagtttgtcgtgtacggtatattggggaccatagcctcttttatattggatggccattagggtttccc 351583  T
Q  209 attattccgttaatgggccatccggacatccactcatgttgagtccatatca 260  Q
    ||||||||  ||||||||||||||||||||||||||  ||||||||||||||    
T  351582 attattccagtaatgggccatccggacatccactca--ttgagtccatatca 351533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 30 - 260
Target Start/End: Complemental strand, 339366 - 339127
Alignment:
Q  30 caacaacgataaccatagagaggagatgatctgaaacgcacaatagagttagcggcggctgatttggttcttcctcaaccggtacctttatgccttaagt 129  Q
    |||||| |||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||    
T  339366 caacaatgataaccaaagagaggagatgatctgaaacacacaatagagttagcggcggctgatttgattcttcctcaaccggtacctttatgcctcaagt 339267  T
Q  130 tctcttcagatggggagaagagagagtttgccgtgtacggtgtattggggac----------tttatattggatggccattagg-ttcccattattccgt 218  Q
    |||||||||||||||||||||||||||||| |||||||||| ||||||||||          |||||||||||||||||||||| |||||||||||||      
T  339266 tctcttcagatggggagaagagagagtttgtcgtgtacggtatattggggaccatgacctcttttatattggatggccattaggtttcccattattccag 339167  T
Q  219 taatgggccatccggacatccactcatgttgagtccatatca 260  Q
    ||||||||||||||||||||||||||  ||||||||||||||    
T  339166 taatgggccatccggacatccactca--ttgagtccatatca 339127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 134; E-Value: 8e-70
Query Start/End: Original strand, 23 - 260
Target Start/End: Original strand, 5979340 - 5979591
Alignment:
Q  23 ctctcatcaacaacgataaccatagagaggagatgatctgaaacgcacaatagagttagcggcggctgatttggttcttcctcaaccggtacctttatgc 122  Q
    |||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||| || |||||||||||||||||||||||| |||||||    
T  5979340 ctctcatcaacaacgataaccaaagagaggagatgatctgaaacacacaatagagttagcggcgactaatttggttcttcctcaaccggtacttttatgc 5979439  T
Q  123 cttaagttctcttcagatggggagaagagagagt-ttgccgtgtacggtgtattggggac----------ttta-tattggatggccattag--gttccc 208  Q
    || ||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||          |||| ||||||||| |||||||   |||||    
T  5979440 ctcaagttctcttcagatggggagaagagagagtattgtcgtgtacggtgtattggggaccataacctcttttattattggatgaccattagactttccc 5979539  T
Q  209 attattccgttaatgggccatccggacatccactcatgttgagtccatatca 260  Q
    ||||||| |||||| ||||||||| |||||||  ||||||||||||||||||    
T  5979540 attattctgttaattggccatccgaacatccatccatgttgagtccatatca 5979591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 21 - 181
Target Start/End: Complemental strand, 20238946 - 20238785
Alignment:
Q  21 ccctctcatcaacaacgataaccatagagaggagatgatctgaaacgcacaatagagttagcggcggctgatttggttcttcctcaaccggtacctttat 120  Q
    |||||||||||||||| ||||||| ||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20238946 ccctctcatcaacaacaataaccaaagagatgagatgatctgaaacacacaatagagttagcggcggctgatttggttcttcctcaaccggtacctttat 20238847  T
Q  121 gccttaagttctcttcagatggggagaagagagagt-ttgccgtgtacggtgtattggggac 181  Q
    |||| ||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||    
T  20238846 gcctcaagttctcttcagatggggagaagagagagtattgccgtgtacggtatattggggac 20238785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 21 - 177
Target Start/End: Complemental strand, 15843942 - 15843785
Alignment:
Q  21 ccctctcatcaacaacgataaccatagagaggagatgatctgaaacgcacaatagagttagcggcggctgatttggttcttcctcaaccggtacctttat 120  Q
    |||||| ||||||||| ||||||| ||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| ||||| |||||    
T  15843942 ccctctaatcaacaacaataaccaaagagaggagatgatcggaaacacacaatagagttagcggcggctgatttggttcttcctcaactggtacatttat 15843843  T
Q  121 gccttaagttctcttcagatggggagaagagagagtttgccgtgta-cggtgtattgg 177  Q
    |||| ||||||||||||||||||||||| ||||||||||||||||| |||||||||||    
T  15843842 gcctcaagttctcttcagatggggagaatagagagtttgccgtgtaccggtgtattgg 15843785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 21 - 177
Target Start/End: Complemental strand, 15861051 - 15860894
Alignment:
Q  21 ccctctcatcaacaacgataaccatagagaggagatgatctgaaacgcacaatagagttagcggcggctgatttggttcttcctcaaccggtacctttat 120  Q
    |||||| ||||||||| ||||||| ||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| ||||| |||||    
T  15861051 ccctctaatcaacaacaataaccaaagagaggagatgatcggaaacacacaatagagttagcggcggctgatttggttcttcctcaactggtacatttat 15860952  T
Q  121 gccttaagttctcttcagatggggagaagagagagtttgccgtgta-cggtgtattgg 177  Q
    |||| ||||||||||||||||||||||| ||||||||||||||||| |||||||||||    
T  15860951 gcctcaagttctcttcagatggggagaatagagagtttgccgtgtaccggtgtattgg 15860894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 54 - 260
Target Start/End: Original strand, 35148204 - 35148422
Alignment:
Q  54 gatgatctgaaacgcacaataga--gttagcggcggctgatttggttcttcctcaaccggtacctttatgccttaagttctcttcagatggggagaagag 151  Q
    ||||||||||||| ||||| | |  || ||| ||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||    
T  35148204 gatgatctgaaacacacaaaatatggtcagcagcggctgatttggttcttcctcaaccggtacctttatgcctcaaattctcttcagatggggagaagag 35148303  T
Q  152 agagtttgccgtgtacggtgtattgggga----------ctttatattggatggccatt--aggttcccattattccgttaatgggccatccggacatcc 239  Q
    |||||||||| ||||||||||||||||||           |||||||||||||||||||  || |||||||||||| ||||||| |||||||||||||||    
T  35148304 agagtttgccatgtacggtgtattggggatcatagcctcttttatattggatggccattagagtttcccattattctgttaatgagccatccggacatcc 35148403  T
Q  240 actcatgttgagtccatatca 260  Q
    |||||  ||||||||||||||    
T  35148404 actca--ttgagtccatatca 35148422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 77 - 260
Target Start/End: Original strand, 22742149 - 22742343
Alignment:
Q  77 gttagcggcggctgatttggttcttcctcaaccggtacctttatgccttaagttctcttcagatggggagaagagagag-tttgccgtgtacggtgtatt 175  Q
    |||||||||||||||||||||| ||| ||||| ||||||||||||||| ||||||||||||||| |||||||||||||| |||||| |||||||| ||||    
T  22742149 gttagcggcggctgatttggtttttcatcaactggtacctttatgcctcaagttctcttcagattgggagaagagagagttttgccatgtacggtatatt 22742248  T
Q  176 ggggac----------tttatattggatggccattagg--ttcccattattccgttaatgggccatccggacatccactcatgttgagtccatatca 260  Q
    || |||          ||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||  ||||||||||||||    
T  22742249 ggagaccatagtctcttttatattggatggccattagggtttcccattattccgttaatgggccatccggacatccactca--ttgagtccatatca 22742343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 77 - 260
Target Start/End: Complemental strand, 5849469 - 5849276
Alignment:
Q  77 gttagcggcggctgatttggttcttcctcaaccggtacctttatgccttaagttctcttcagatggggagaagagagagtttgccgtgtacggtgtattg 176  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||| ||||||||||||||||||||| |||||    
T  5849469 gttagcggcgtctgatttggttcttcctcaaccggtacctttatgcctcaagttatcttcagatggggagaaaagagagtttgccgtgtacggtatattg 5849370  T
Q  177 gggac----------tttatattggatggccatta--ggttcccattattccgttaatgggccatccggacatccactcatgttgagtccatatca 260  Q
     ||||          ||||||||||||| ||||||  | ||| ||||||||||||||||| ||||||| |||||||||||  ||||||||||||||    
T  5849369 aggaccatagcctcttttatattggatgaccattaaggtttctcattattccgttaatggaccatccgaacatccactca--ttgagtccatatca 5849276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 22 - 260
Target Start/End: Complemental strand, 43539979 - 43539723
Alignment:
Q  22 cctctcatcaacaacgataaccatagagaggag---atgatctgaaacgcacaataga--gttagcggcggctgatttggttcttcctcaaccggtacct 116  Q
    ||||||| |||||||||||| || |||||||||   |||||||||||| ||||| | |  |||||||||| |||||||||||||||||||||| ||||||    
T  43539979 cctctcaacaacaacgataaacaaagagaggaggtgatgatctgaaacacacaaaatatggttagcggcgactgatttggttcttcctcaaccagtacct 43539880  T
Q  117 ttatgccttaagttctcttcagatgg---ggagaagagagagtttgccgtgtacggtgtattggggac----------tttatattggatggccattagg 203  Q
    |||||||| |||||||||||||||||   |||||||||||||||||||||| ||||| ||||||||||          |||||||||| || ||||||||    
T  43539879 ttatgcctaaagttctcttcagatgggaaggagaagagagagtttgccgtgcacggtatattggggaccataacctcttttatattgggtgaccattagg 43539780  T
Q  204 --ttcccattattccgttaatgggccatccggacatccactcatgttgagtccatatca 260  Q
      || || |||||||||||||||| ||||| ||||||||||||  ||||||||||||||    
T  43539779 gttttccgttattccgttaatgggtcatccagacatccactca--ttgagtccatatca 43539723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 54 - 182
Target Start/End: Original strand, 35150736 - 35150866
Alignment:
Q  54 gatgatctgaaacgcacaataga--gttagcggcggctgatttggttcttcctcaaccggtacctttatgccttaagttctcttcagatggggagaagag 151  Q
    ||||||||||||| ||||| | |  |||||||||||||||||||||| ||| ||||||||||||||||||||| ||||||||||||||||||||||||||    
T  35150736 gatgatctgaaacacacaaaatatggttagcggcggctgatttggttattcttcaaccggtacctttatgcctcaagttctcttcagatggggagaagag 35150835  T
Q  152 agagtttgccgtgtacggtgtattggggact 182  Q
    |||||||||| ||||||||||||||||||||    
T  35150836 agagtttgccatgtacggtgtattggggact 35150866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 116 - 258
Target Start/End: Complemental strand, 26383569 - 26383417
Alignment:
Q  116 tttatgccttaagttctcttcagatggggagaagagagagtttgccgtgtacggtgtattggggac----------tttatattggatggccattagg-- 203  Q
    ||||||||| |||||||||||| || |||||||||||||||||||||||| ||||||||| |||||          ||||||||||||| ||||||||      
T  26383569 tttatgcctcaagttctcttcaaatagggagaagagagagtttgccgtgtccggtgtattagggaccatagcctcttttatattggatgaccattagggt 26383470  T
Q  204 ttcccattattccgttaatgggccatccggacatccactcatgttgagtccatat 258  Q
    ||||||||||||| |||||||| ||||||||||||||||||  ||||||||||||    
T  26383469 ttcccattattccattaatgggtcatccggacatccactca--ttgagtccatat 26383417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 77 - 165
Target Start/End: Complemental strand, 26381023 - 26380935
Alignment:
Q  77 gttagcggcggctgatttggttcttcctcaaccggtacctttatgccttaagttctcttcagatggggagaagagagagtttgccgtgt 165  Q
    |||||||||||||||||||||||||||||||| | ||||||||||||| ||||| ||||||||| |||||||||||||||||| |||||    
T  26381023 gttagcggcggctgatttggttcttcctcaactgctacctttatgcctaaagttttcttcagatcgggagaagagagagtttgtcgtgt 26380935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 24 - 152
Target Start/End: Complemental strand, 7608437 - 7608306
Alignment:
Q  24 tctcatcaacaacgataaccatagagaggagatgatctgaaacgcacaatagag--ttagcggcggctgatttggttcttcctcaaccggtacctttatg 121  Q
    |||||||||||| |||||||| ||||| ||||||||||||||| ||||  || |  ||||||||| |||||||||| |||||| || |||||||||||||    
T  7608437 tctcatcaacaatgataaccaaagagatgagatgatctgaaacacacataagcggattagcggcgactgatttggtacttcctaaatcggtacctttatg 7608338  T
Q  122 ccttaagttctcttcagat-ggggagaagaga 152  Q
     || ||||||||||| ||| ||||||||||||    
T  7608337 actcaagttctcttccgatgggggagaagaga 7608306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 182 - 260
Target Start/End: Original strand, 35152864 - 35152942
Alignment:
Q  182 tttatattggatggccattagg--ttcccattattccgttaatgggccatccggacatccactcatgttgagtccatatca 260  Q
    ||||||||||||| ||||||||  |||||||||||||||||||||| ||||||||||||||||||  ||||||||||||||    
T  35152864 tttatattggatgaccattagggtttcccattattccgttaatgggtcatccggacatccactca--ttgagtccatatca 35152942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 87 - 177
Target Start/End: Original strand, 18656883 - 18656973
Alignment:
Q  87 gctgatttggttcttcctcaaccggtacctttatgccttaagttctcttcagatggggagaagagagagtttgccgtgtacggtgtattgg 177  Q
    |||||||||||||||||||||| | ||| |||||| ||| ||||||||||||| || ||||||||| |||||| |||||| |||| |||||    
T  18656883 gctgatttggttcttcctcaactgttacttttatgtctttagttctcttcagacggagagaagagaaagtttgtcgtgtatggtgcattgg 18656973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 76 - 165
Target Start/End: Complemental strand, 3677965 - 3677876
Alignment:
Q  76 agttagcggcggctgatttggttcttcctcaaccggtacctttatgccttaagttctcttcagatggggagaagagagagtttgccgtgt 165  Q
    ||||| |||| | ||||||| |||||||||||||| ||| ||||||||| || |||||||||||||| |||||||||  ||||| |||||    
T  3677965 agttaccggcagttgatttgtttcttcctcaaccgatacttttatgcctcaatttctcttcagatggagagaagagaatgtttgtcgtgt 3677876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 77 - 122
Target Start/End: Complemental strand, 12803938 - 12803893
Alignment:
Q  77 gttagcggcggctgatttggttcttcctcaaccggtacctttatgc 122  Q
    ||||||| || |||||| ||||||||||||||||||||||||||||    
T  12803938 gttagcgacgactgattaggttcttcctcaaccggtacctttatgc 12803893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 77 - 110
Target Start/End: Complemental strand, 24690881 - 24690848
Alignment:
Q  77 gttagcggcggctgatttggttcttcctcaaccg 110  Q
    ||||||||||||||||||||||||||||||||||    
T  24690881 gttagcggcggctgatttggttcttcctcaaccg 24690848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 245
Target Start/End: Complemental strand, 7608251 - 7608186
Alignment:
Q  182 tttatattggatggccattagg--ttcccattattccgttaatgggccatccggacatccactcat 245  Q
    |||||||||||||| |||||||  ||  ||||||| | |||||||| |||||||||||||||||||    
T  7608251 tttatattggatggtcattagggtttttcattatttcattaatgggtcatccggacatccactcat 7608186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 63
Target Start/End: Original strand, 42767459 - 42767501
Alignment:
Q  21 ccctctcatcaacaacgataaccatagagaggagatgatctga 63  Q
    ||||||||||||||||||||| || |||||| |||||||||||    
T  42767459 ccctctcatcaacaacgataatcaaagagagaagatgatctga 42767501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 192 - 245
Target Start/End: Original strand, 42767547 - 42767602
Alignment:
Q  192 atggccattagg--ttcccattattccgttaatgggccatccggacatccactcat 245  Q
    ||||||||||||  |||| ||||||||||||||||  ||||| |||||||||||||    
T  42767547 atggccattagggtttcctattattccgttaatggatcatccagacatccactcat 42767602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 190; Significance: 1e-103; HSPs: 18)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 21 - 260
Target Start/End: Original strand, 12686343 - 12686594
Alignment:
Q  21 ccctctcatcaacaacgataaccatagagaggagatgatctgaaacgcacaatagagttagcggcggctgatttggttcttcctcaaccggtacctttat 120  Q
    |||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12686343 ccctctcatcaacaacgataaccaaagagaggagatgatctgaaacacacaatagagttagcggcggctgatttggttcttcctcaaccggtacctttat 12686442  T
Q  121 gccttaagttctcttcagatggggagaagagagagtttgccgtgtacggtgtattggggac----------tttatattggatggccattagg--ttccc 208  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||          |||||||| |||||||||||||  |||||    
T  12686443 gcctcaagttctcttcagatggggagaagagagagtttgccgtgtacggtgtattggggaccatagcctcttttatatttgatggccattagggtttccc 12686542  T
Q  209 attattccgttaatgggccatccggacatccactcatgttgagtccatatca 260  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12686543 attattccgttaatgggccatccggacatccactcatgttgagtccatatca 12686594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 21 - 260
Target Start/End: Original strand, 12692445 - 12692696
Alignment:
Q  21 ccctctcatcaacaacgataaccatagagaggagatgatctgaaacgcacaatagagttagcggcggctgatttggttcttcctcaaccggtacctttat 120  Q
    |||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12692445 ccctctcatcaacaacgataaccaaagagaggagatgatctgaaacacacaatagagttagcggcggctgatttggttcttcctcaaccggtacctttat 12692544  T
Q  121 gccttaagttctcttcagatggggagaagagagagtttgccgtgtacggtgtattggggac----------tttatattggatggccattagg--ttccc 208  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||          |||||||| |||||||||||||  |||||    
T  12692545 gcctcaagttctcttcagatggggagaagagagagtttgccgtgtacggtgtattggggaccatagcctcttttatatttgatggccattagggtttccc 12692644  T
Q  209 attattccgttaatgggccatccggacatccactcatgttgagtccatatca 260  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12692645 attattccgttaatgggccatccggacatccactcatgttgagtccatatca 12692696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 28 - 260
Target Start/End: Original strand, 32097193 - 32097438
Alignment:
Q  28 atcaacaacgataaccatagagaggagatgatctgaaacgcacaatagagttagcggcggctgatttggttcttcctcaaccggtacctttatgccttaa 127  Q
    ||||||||||||||||| ||||| ||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||    
T  32097193 atcaacaacgataaccaaagagatgagatgatctgaaacacacaatagagttagcggcggctgatttagttcttcctcaaccggtacctttatgcctcaa 32097292  T
Q  128 gttctcttcagatggggagaagagagagt-ttgccgtgtacggtgtattggggac----------tttatattggatggccattagg--ttcccattatt 214  Q
    ||||||||||||||||||||| ||||||| || ||||||||||||||||||||||          ||||||||||||||||||||||  |||||||||||    
T  32097293 gttctcttcagatggggagaatagagagtatttccgtgtacggtgtattggggaccatagcctcttttatattggatggccattagggtttcccattatt 32097392  T
Q  215 ccgttaatgggccatccggacatccactcatgttgagtccatatca 260  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  32097393 ccgttaatgggccatccggacatccactcatgttgagtccatatca 32097438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 159; E-Value: 9e-85
Query Start/End: Original strand, 21 - 260
Target Start/End: Original strand, 28525550 - 28525799
Alignment:
Q  21 ccctctcatcaacaacgataaccatagagaggagatgatctgaaacgcacaatagagttagcggcggctgatttggttcttcctcaaccggtacctttat 120  Q
    |||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||| ||||| |||||||||| ||||||||||||||||||||||||    
T  28525550 ccctctcatcaacaacgataaccaaagagaggagatgatctgaaacacacaatagagtcagcggtggctgatttgattcttcctcaaccggtacctttat 28525649  T
Q  121 gccttaagttctcttcagatggggagaagagagagtttgccgtgtacggtgtattggggac----------tttatattggatggccattagg--ttccc 208  Q
    |||| | |||||||||||||||||||||||||||||||||| |||||||| ||||||||||          ||||||||||||||||||||||  |||||    
T  28525650 gcctcacgttctcttcagatggggagaagagagagtttgccatgtacggtatattggggaccatagcctcttttatattggatggccattagggtttccc 28525749  T
Q  209 attattccgttaatgggccatccggacatccactcatgttgagtccatatca 260  Q
    ||||||||||||||||||||||||||||||||||||  ||||||||||||||    
T  28525750 attattccgttaatgggccatccggacatccactca--ttgagtccatatca 28525799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 28 - 260
Target Start/End: Original strand, 32094392 - 32094637
Alignment:
Q  28 atcaacaacgataaccatagagaggagatgatctgaaacgcacaatagagttagcggcggctgatttggttcttcctcaaccggtacctttatgccttaa 127  Q
    ||||||||| ||||||| |||||| |||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||    
T  32094392 atcaacaacaataaccaaagagagaagatgatctgaaacacacaatagagttagcggcggctaatttggttcttcctcaaccggtacctttatgcctcaa 32094491  T
Q  128 gttctcttcagatggggagaagagagagt-ttgccgtgtacggtgtattggggac----------tttatattggatggccattagg--ttcccattatt 214  Q
    ||||||||||||||||||||||||||||| ||| ||||||||||||||| |||||          |||||||| |||||||||||||  |||||||||||    
T  32094492 gttctcttcagatggggagaagagagagtattgtcgtgtacggtgtatttgggaccatagcctcttttatattagatggccattagggtttcccattatt 32094591  T
Q  215 ccgttaatgggccatccggacatccactcatgttgagtccatatca 260  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||    
T  32094592 ccgttaatgggccatccggacatacactcatgttgagtccatatca 32094637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 21 - 260
Target Start/End: Original strand, 28531646 - 28531895
Alignment:
Q  21 ccctctcatcaacaacgataaccatagagaggagatgatctgaaacgcacaatagagttagcggcggctgatttggttcttcctcaaccggtacctttat 120  Q
    |||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||| ||||| |||||||||| ||||||||||||| ||||||||||    
T  28531646 ccctctcatcaacaacgataaccaaagagaggagatgatctgaaacacacaatagagtcagcggtggctgatttgattcttcctcaaccagtacctttat 28531745  T
Q  121 gccttaagttctcttcagatggggagaagagagagtttgccgtgtacggtgtattggggac----------tttatattggatggccattagg--ttccc 208  Q
    |||| | |||||||||||||||||||||||||||||||||| |||||||| |||||| |||          ||||||||||||||||||||||  |||||    
T  28531746 gcctcacgttctcttcagatggggagaagagagagtttgccatgtacggtatattggagaccatagcctcttttatattggatggccattagggtttccc 28531845  T
Q  209 attattccgttaatgggccatccggacatccactcatgttgagtccatatca 260  Q
    ||||||||||||||||||||||||||||||||||||  ||||||||||||||    
T  28531846 attattccgttaatgggccatccggacatccactca--ttgagtccatatca 28531895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 144; E-Value: 8e-76
Query Start/End: Original strand, 18 - 260
Target Start/End: Complemental strand, 41297281 - 41297025
Alignment:
Q  18 caaccctctcatcaacaacgataaccatagagaggagatgatctgaaacgcacaatagagttagcggcggctgatttggttcttcctcaaccggtacctt 117  Q
    |||||||||||||||||||||||||||  |||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41297281 caaccctctcatcaacaacgataaccaaggagaggaggtgatctgaaacacacaatagagttagcggcggctgatttggttcttcctcaaccggtacctt 41297182  T
Q  118 tatgcctta---agttctcttcagatggggagaagagagagt-ttgccgtgtacggtgtattggggac----------tttatattggatggccattagg 203  Q
    ||||||| |   |||||||||||||||||||||||||||||| ||| |||||||||||||||||||||          ||||||||||||| ||||||||    
T  41297181 tatgcctcaagtagttctcttcagatggggagaagagagagtattgtcgtgtacggtgtattggggaccatagcctcttttatattggatgaccattagg 41297082  T
Q  204 --ttcccattattccgttaatgggccatccggacatccactcatgttgagtccatatca 260  Q
      |||||||||||| ||||||||| ||||||||||||||||||  ||||||||||||||    
T  41297081 gtttcccattattctgttaatgggtcatccggacatccactca--ttgagtccatatca 41297025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 23 - 245
Target Start/End: Original strand, 7389713 - 7389948
Alignment:
Q  23 ctctcatcaacaacgataaccatagagaggagatgatctgaaacgcacaatagagttagcggcggctgatttggttcttcctcaaccggtacctttatgc 122  Q
    |||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  7389713 ctctcatcaacaacgataaccaaagagaggagatgatctgaaacacacaatagagttagcggcgactgatttggttcttcctcaaccggtacctttatgc 7389812  T
Q  123 cttaagttctcttcagatggggagaagagagag-tttgccgtgtacggtgtattggggac----------tttatattggatggccatt--aggttccca 209  Q
    || |||||||||||||||||||||||||||||| |||||||||||| || ||||||| ||          |||||||||||||||||||  || ||||||    
T  7389813 ctcaagttctcttcagatggggagaagagagagttttgccgtgtacagtatattgggaaccatagcctcttttatattggatggccattagagtttccca 7389912  T
Q  210 ttattccgttaatgggccatccggacatccactcat 245  Q
    |||||||||||||||| |||||| ||||||||||||    
T  7389913 ttattccgttaatgggtcatccgaacatccactcat 7389948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 46 - 260
Target Start/End: Complemental strand, 14610139 - 14609916
Alignment:
Q  46 agagaggagatgatctgaaacgcacaatagagttagcggcggctgatttggttcttcctcaaccggtacctttatgccttaagttctcttcagatgggga 145  Q
    |||||||||||||||||||||  |||| || |||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||    
T  14610139 agagaggagatgatctgaaacaaacaaaagggttagcggcggctgatttggttcttcctcaaccggtacttttatgcctaaagttctcttcagatgggga 14610040  T
Q  146 gaagagagagtttgccgtgtacggtgtattggggac----------tttatattggatggccatta-ggttcccattattccgttaatgggccatccgga 234  Q
    ||| ||| |||||||||||| |||||||||||||||          |||| ||| |||| |||||| |||| ||||||||||||||||||||||||||||    
T  14610039 gaaaagaaagtttgccgtgttcggtgtattggggaccataacctcttttacattagatgaccattagggtttccattattccgttaatgggccatccgga 14609940  T
Q  235 catccactcatgttgagtccatatca 260  Q
    ||||||||||  ||||||||||||||    
T  14609939 catccactca--ttgagtccatatca 14609916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 77 - 259
Target Start/End: Original strand, 19059991 - 19060185
Alignment:
Q  77 gttagcggcggctgatttggttcttcctcaaccggtacctttatgccttaagttctcttcagatggggagaagagagagtttgccgtgtacggtgtattg 176  Q
    |||||||||||||||||||||||||||||||| ||||| ||||||||| |||||||||||| || |||||||||||||||||| |||||  | |||||||    
T  19059991 gttagcggcggctgatttggttcttcctcaactggtacttttatgcctcaagttctcttcatatcgggagaagagagagtttgtcgtgtctgatgtattg 19060090  T
Q  177 gggac----------tttatattggatggccattagg--ttcccattattccgttaatgggccatccggacatccactcatgttgagtccatatc 259  Q
    |||||          ||||||||||||||||||||||  |||||||||||||||||||||| ||||| ||||||||||||| |||||||||||||    
T  19060091 gggaccatagcctcttttatattggatggccattagggtttcccattattccgttaatgggacatccagacatccactcatattgagtccatatc 19060185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 77 - 245
Target Start/End: Original strand, 19066332 - 19066512
Alignment:
Q  77 gttagcggcggctgatttggttcttcctcaaccggtacctttatgccttaagttctcttcagatggggagaagagagagtttgccgtgtacggtgtattg 176  Q
    ||||||||| ||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||| ||||||||||    
T  19066332 gttagcggcagctgatttgattcttcctcaaccggtacctttatgcctcaagttctcttcagatggggagaagagagagtttgtcgtgtccggtgtattg 19066431  T
Q  177 gggac----------tttatattggatggccattagg--ttcccattattccgttaatgggccatccggacatccactcat 245  Q
    |||||          |||||||||||||| |||||||  || |||||||| |||||||||| ||||| |||||||||||||    
T  19066432 gggaccacaacctattttatattggatggtcattagggttttccattatttcgttaatgggtcatccagacatccactcat 19066512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 54 - 260
Target Start/End: Complemental strand, 30772246 - 30772026
Alignment:
Q  54 gatgatctgaaacgcacaatagag--ttagcggcggctgatttggttcttcctcaaccggtacctttatgccttaagttctcttcagatggggagaagag 151  Q
    ||||||||||||| ||||| | ||  |||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  30772246 gatgatctgaaacacacaacaaagggttagcggcggctgatttgattcttcctcaaccggtacctttatgcctcaagttctcttcagatggggagaagag 30772147  T
Q  152 agagtttgccgtgtacggtgtattggggac----------tttatattggatggccattagg--ttcccattattccgttaatgggccatccggacatcc 239  Q
    |||||||| |||||  | | ||||| ||||          | |||||||||||  ||| |||  ||  |||||||| ||||||||| ||||| |||||||    
T  30772146 agagtttgtcgtgtctgatatattgtggaccatagtctcttctatattggatgatcatcagggtttttcattattctgttaatgggtcatccagacatcc 30772047  T
Q  240 actcatgttgagtccatatca 260  Q
    |||||| ||||||||||||||    
T  30772046 actcatattgagtccatatca 30772026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 58 - 245
Target Start/End: Original strand, 30384586 - 30384784
Alignment:
Q  58 atctgaaacgcacaatagag-ttagcggcggctgatttggttcttcctcaaccggtacctttatgccttaagttctcttcagatggggagaagagagagt 156  Q
    ||||||||| ||||| | || ||||||||| ||||||||||||||||||||||||||||||||| |||  ||||||||||||||||||||||||||  ||    
T  30384586 atctgaaacacacaacatagcttagcggcgactgatttggttcttcctcaaccggtacctttatacctcgagttctcttcagatggggagaagagaatgt 30384685  T
Q  157 ttgccgtgtacggtgtattggggac---------tttatattggatggccattag-gttcccattattccgttaatgggccatccggacatccactcat 245  Q
    ||||||||||||||||||||||  |         ||||||||||||| | |||||  || ||||||||||||||||| | ||||| |||||||||||||    
T  30384686 ttgccgtgtacggtgtattgggaccatagtctcttttatattggatgactattagattttccattattccgttaatgagtcatccagacatccactcat 30384784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 77 - 260
Target Start/End: Complemental strand, 20500078 - 20499884
Alignment:
Q  77 gttagcggcggctgatttggttcttcctcaaccggtacctttatgccttaagttctcttcagatggggagaagagagag-tttgccgtgtacggtgtatt 175  Q
    |||||| |||| |||||||||||||||| ||||||||| ||||||||| |||||||||||| |||| ||||| |||||| ||||||||||||||||||||    
T  20500078 gttagcagcggttgatttggttcttccttaaccggtacatttatgcctcaagttctcttcaaatggagagaacagagagttttgccgtgtacggtgtatt 20499979  T
Q  176 ggggac----------tttatattggatggccattagg--ttcccattattccgttaatgggccatccggacatccactcatgttgagtccatatca 260  Q
    ||||||          | | ||||||||| ||||||||  || |||||||| |||||||||||||||| ||||||||||||  ||||||||||||||    
T  20499978 ggggaccatagcctcttatttattggatgaccattagggttttccattatttcgttaatgggccatccagacatccactca--ttgagtccatatca 20499884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 89 - 180
Target Start/End: Original strand, 26318492 - 26318582
Alignment:
Q  89 tgatttggttcttcctcaaccggtacctttatgccttaagttctcttcagatggggagaagagagagtttgccgtgtacggtgtattgggga 180  Q
    ||||||||||||| |||||||||||| ||||| || |||||||||||||||| |||||||||||||||||| ||| | || | |||||||||    
T  26318492 tgatttggttctttctcaaccggtacatttataccataagttctcttcagat-gggagaagagagagtttgtcgtttccgatatattgggga 26318582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 83 - 170
Target Start/End: Complemental strand, 26509781 - 26509696
Alignment:
Q  83 ggcggctgatttggttcttcctcaaccggtacctttatgccttaagttctcttcagatggggagaagagagagtttgccgtgtacggt 170  Q
    ||||||||||||| | ||||||||| ||||||||||||||||  ||||||| ||||||  ||| ||| |||||||| |||||||||||    
T  26509781 ggcggctgatttgatacttcctcaatcggtacctttatgcctctagttctcatcagat--ggaaaagggagagtttaccgtgtacggt 26509696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 98 - 173
Target Start/End: Original strand, 33753476 - 33753551
Alignment:
Q  98 tcttcctcaaccggtacctttatgccttaagttctcttcagatggggagaagagagagtttgccgtgtacggtgta 173  Q
    |||| ||||| |||||  ||||||||| |||||||| |  ||||||||||||||||||| ||  ||||||||||||    
T  33753476 tctttctcaaacggtatttttatgcctcaagttctccttggatggggagaagagagagtatggtgtgtacggtgta 33753551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 77 - 110
Target Start/End: Original strand, 8706639 - 8706672
Alignment:
Q  77 gttagcggcggctgatttggttcttcctcaaccg 110  Q
    ||||||| ||||||||||||||||||||||||||    
T  8706639 gttagcgacggctgatttggttcttcctcaaccg 8706672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0208 (Bit Score: 187; Significance: 1e-101; HSPs: 2)
Name: scaffold0208
Description:

Target: scaffold0208; HSP #1
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 21 - 260
Target Start/End: Complemental strand, 6518 - 6266
Alignment:
Q  21 ccctctcatcaacaacgataaccatagagaggagatgatctgaaacgcacaatagagttagcggcggctgatttggttcttcctcaaccggtacctttat 120  Q
    |||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6518 ccctctcatcaacaacgataaccaaagagaggagatgatctgaaacacacaatagagttagcggcggctgatttggttcttcctcaaccggtacctttat 6419  T
Q  121 gccttaagttctcttcagatggggagaagagagagt-ttgccgtgtacggtgtattggggac----------tttatattggatggccattagg--ttcc 207  Q
    |||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||          ||||||||||||||||||||||  ||||    
T  6418 gcctcaagttctcttcagatggggagaagagagagtattgccgtgtacggtgtattggggaccatagcctcttttatattggatggccattagggtttcc 6319  T
Q  208 cattattccgttaatgggccatccggacatccactcatgttgagtccatatca 260  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6318 cattattccgttaatgggccatccggacatccactcatgttgagtccatatca 6266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0208; HSP #2
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 22 - 260
Target Start/End: Complemental strand, 12390 - 12139
Alignment:
Q  22 cctctcatcaacaacgataaccatagagaggagatgatctgaaacgcacaatagagttagcggcggctgatttggttcttcctcaaccggtacctttatg 121  Q
    ||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12390 cctctcatcaacaacgataaccaaagagaggagatgatctgaaacacacaatagagttagcggcggctgatttggttcttcctcaaccggtacctttatg 12291  T
Q  122 ccttaagttctcttcagatggggagaagagagagt-ttgccgtgtacggtgtattggggac----------tttatattggatggccattagg--ttccc 208  Q
    ||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||          ||||||||||||||||||||||  |||||    
T  12290 cctcaagttctcttcagatggggagaagagagagtattgccgtgtacggtgtattggggaccatagcctcttttatattggatggccattagggtttccc 12191  T
Q  209 attattccgttaatgggccatccggacatccactcatgttgagtccatatca 260  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12190 attattccgttaatgggccatccggacatccactcatgttgagtccatatca 12139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 187; Significance: 1e-101; HSPs: 33)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 21 - 260
Target Start/End: Original strand, 11839889 - 11840141
Alignment:
Q  21 ccctctcatcaacaacgataaccatagagaggagatgatctgaaacgcacaatagagttagcggcggctgatttggttcttcctcaaccggtacctttat 120  Q
    |||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11839889 ccctctcatcaacaacgataaccaaagagaggagatgatctgaaacacacaatagagttagcggcggctgatttggttcttcctcaaccggtacctttat 11839988  T
Q  121 gccttaagttctcttcagatggggagaagagagagt-ttgccgtgtacggtgtattggggac----------tttatattggatggccattagg--ttcc 207  Q
    |||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||          ||||||||||||||||||||||  ||||    
T  11839989 gcctcaagttctcttcagatggggagaagagagagtattgccgtgtacggtgtattggggaccatagcctcttttatattggatggccattagggtttcc 11840088  T
Q  208 cattattccgttaatgggccatccggacatccactcatgttgagtccatatca 260  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11840089 cattattccgttaatgggccatccggacatccactcatgttgagtccatatca 11840141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 21 - 260
Target Start/End: Original strand, 10244498 - 10244750
Alignment:
Q  21 ccctctcatcaacaacgataaccatagagaggagatgatctgaaacgcacaatagagttagcggcggctgatttggttcttcctcaaccggtacctttat 120  Q
    |||||||||||||||||||||||| |||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  10244498 ccctctcatcaacaacgataaccaaagagaggagatgatatgaaacacacaatagagttagcggcggctgatttggttcttcctcaaccggtacatttat 10244597  T
Q  121 gccttaagttctcttcagatggggagaagagagagt-ttgccgtgtacggtgtattggggac----------tttatattggatggccattagg--ttcc 207  Q
    |||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||          ||||||||||||||||||||||  ||||    
T  10244598 gcctcaagttctcttcagatggggagaagagagagtattgccgtgtacggtgtattggggaccatagcctcttttatattggatggccattagggtttcc 10244697  T
Q  208 cattattccgttaatgggccatccggacatccactcatgttgagtccatatca 260  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10244698 cattattccgttaatgggccatccggacatccactcatgttgagtccatatca 10244750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 21 - 260
Target Start/End: Original strand, 42191384 - 42191636
Alignment:
Q  21 ccctctcatcaacaacgataaccatagagaggagatgatctgaaacgcacaatagagttagcggcggctgatttggttcttcctcaaccggtacctttat 120  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  42191384 ccctctcatcaacaactataaccaaagagaggagatgatctgaaacacacaatagagttagcggtggctgatttggttcttcctcaaccggtacctttat 42191483  T
Q  121 gccttaagttctcttcagatggggagaagagagagt-ttgccgtgtacggtgtattggggac----------tttatattggatggccattagg--ttcc 207  Q
    |||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||          ||||||||||||||||||||||  ||||    
T  42191484 gcctcaagttctcttcagatggggagaagagagagtattgccgtgtacggtgtattggggaccatagcctcttttatattggatggccattagggtttcc 42191583  T
Q  208 cattattccgttaatgggccatccggacatccactcatgttgagtccatatca 260  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42191584 cattattccgttaatgggccatccggacatccactcatgttgagtccatatca 42191636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 21 - 260
Target Start/End: Original strand, 42197326 - 42197578
Alignment:
Q  21 ccctctcatcaacaacgataaccatagagaggagatgatctgaaacgcacaatagagttagcggcggctgatttggttcttcctcaaccggtacctttat 120  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  42197326 ccctctcatcaacaactataaccaaagagaggagatgatctgaaacacacaatagagttagcggtggctgatttggttcttcctcaaccggtacctttat 42197425  T
Q  121 gccttaagttctcttcagatggggagaagagagagt-ttgccgtgtacggtgtattggggac----------tttatattggatggccattagg--ttcc 207  Q
    |||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||          ||||||||||||||||||||||  ||||    
T  42197426 gcctcaagttctcttcagatggggagaagagagagtattgccgtgtacggtgtattggggaccatagcctcttttatattggatggccattagggtttcc 42197525  T
Q  208 cattattccgttaatgggccatccggacatccactcatgttgagtccatatca 260  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42197526 cattattccgttaatgggccatccggacatccactcatgttgagtccatatca 42197578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 175; E-Value: 3e-94
Query Start/End: Original strand, 21 - 260
Target Start/End: Original strand, 10238376 - 10238628
Alignment:
Q  21 ccctctcatcaacaacgataaccatagagaggagatgatctgaaacgcacaatagagttagcggcggctgatttggttcttcctcaaccggtacctttat 120  Q
    |||||||||||||||||||||||| |||||||| ||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  10238376 ccctctcatcaacaacgataaccaaagagaggatatgatatgaaacacacaatagagttagcggcggctgatttggttcttcctcaaccggtacatttat 10238475  T
Q  121 gccttaagttctcttcagatggggagaagagagagt-ttgccgtgtacggtgtattggggac----------tttatattggatggccattagg--ttcc 207  Q
    |||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||          ||||||||||||||||||||||  ||||    
T  10238476 gcctcaagttctcttcagatggggagaagagagagtattgccgtgtacggtgtattggggaccatagcctcttttatattggatggccattagggtttcc 10238575  T
Q  208 cattattccgttaatgggccatccggacatccactcatgttgagtccatatca 260  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10238576 cattattccgttaatgggccatccggacatccactcatgttgagtccatatca 10238628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 168; E-Value: 4e-90
Query Start/End: Original strand, 21 - 260
Target Start/End: Original strand, 10769133 - 10769383
Alignment:
Q  21 ccctctcatcaacaacgataaccatagagaggagatgatctgaaacgcacaatagagttagcggcggctgatttggttcttcctcaaccggtacctttat 120  Q
    |||||||||||||||||||||||| ||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10769133 ccctctcatcaacaacgataaccaaagagaggagatgatctgaaatacacaatagagttagcggcggctgatttggttcttcctcaaccggtacctttat 10769232  T
Q  121 gccttaagttctcttcagatggggagaagagagagt-ttgccgtgtacggtgtattggggac----------tttatattggatggccattagg--ttcc 207  Q
    |||| ||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||          ||||||||||||||||||||||  ||||    
T  10769233 gcctcaagttctcttcagatggggagaagagagagtattgccgtgtacggtatattggggaccatagcctcttttatattggatggccattagggtttcc 10769332  T
Q  208 cattattccgttaatgggccatccggacatccactcatgttgagtccatatca 260  Q
    |||||||||||||||||||||||||||||||||||||  ||||||||||||||    
T  10769333 cattattccgttaatgggccatccggacatccactca--ttgagtccatatca 10769383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 163; E-Value: 4e-87
Query Start/End: Original strand, 21 - 260
Target Start/End: Complemental strand, 49151607 - 49151358
Alignment:
Q  21 ccctctcatcaacaacgataaccatagagaggagatgatctgaaacgcacaatagagttagcggcggctgatttggttcttcctcaaccggtacctttat 120  Q
    |||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||| |||||||||| ||||||||||||||||||||||||    
T  49151607 ccctctcatcaacaacgataaccaaagagaggagatgatctgaaacacacaatagagttagcggtggctgatttgattcttcctcaaccggtacctttat 49151508  T
Q  121 gccttaagttctcttcagatggggagaagagagagtttgccgtgtacggtgtattggggac----------tttatattggatggccattagg--ttccc 208  Q
    |||| | |||||||||||||||||||||||||||||||||| |||||||| ||||||||||          ||||||||||||||||||||||  |||||    
T  49151507 gcctcacgttctcttcagatggggagaagagagagtttgccatgtacggtatattggggaccatagcctcttttatattggatggccattagggtttccc 49151408  T
Q  209 attattccgttaatgggccatccggacatccactcatgttgagtccatatca 260  Q
    ||||||||||||||||||||||||||||||||||||  ||||||||||||||    
T  49151407 attattccgttaatgggccatccggacatccactca--ttgagtccatatca 49151358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 163; E-Value: 4e-87
Query Start/End: Original strand, 21 - 260
Target Start/End: Complemental strand, 49157674 - 49157425
Alignment:
Q  21 ccctctcatcaacaacgataaccatagagaggagatgatctgaaacgcacaatagagttagcggcggctgatttggttcttcctcaaccggtacctttat 120  Q
    |||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||| |||||||||| ||||||||||||||||||||||||    
T  49157674 ccctctcatcaacaacgataaccaaagagaggagatgatctgaaacacacaatagagttagcggtggctgatttgattcttcctcaaccggtacctttat 49157575  T
Q  121 gccttaagttctcttcagatggggagaagagagagtttgccgtgtacggtgtattggggac----------tttatattggatggccattagg--ttccc 208  Q
    |||| | |||||||||||||||||||||||||||||||||| |||||||| ||||||||||          ||||||||||||||||||||||  |||||    
T  49157574 gcctcacgttctcttcagatggggagaagagagagtttgccatgtacggtatattggggaccatagcctcttttatattggatggccattagggtttccc 49157475  T
Q  209 attattccgttaatgggccatccggacatccactcatgttgagtccatatca 260  Q
    ||||||||||||||||||||||||||||||||||||  ||||||||||||||    
T  49157474 attattccgttaatgggccatccggacatccactca--ttgagtccatatca 49157425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 162; E-Value: 1e-86
Query Start/End: Original strand, 21 - 260
Target Start/End: Original strand, 17055957 - 17056207
Alignment:
Q  21 ccctctcatcaacaacgataaccatagagaggagatgatctgaaacgcacaatagagttagcggcggctgatttggttcttcctcaaccggtacctttat 120  Q
    |||||| |||||||||| |||||| ||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17055957 ccctctaatcaacaacggtaaccaaagataggagatgatctgaaacacacaatagagttagcggcggctgatttggttcttcctcaaccggtacctttat 17056056  T
Q  121 gccttaagttctcttcagatggggagaagagagagtttgccgtgtacggtgtattggggac----------tttatattggatggccattagg--ttccc 208  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||          ||||||||||||| ||||||||  |||||    
T  17056057 gcctcaagttctcttcagatggggagaagagagagtttgccgtgtacgatgtattggggaccatagcctcttttatattggatgtccattagggtttccc 17056156  T
Q  209 attattccgttaatgggccatccggacatccactcatgttgagtccatatca 260  Q
    |||||||||||||| || ||||||||||||||||||||||||||||||||||    
T  17056157 attattccgttaatagg-catccggacatccactcatgttgagtccatatca 17056207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 160; E-Value: 2e-85
Query Start/End: Original strand, 21 - 245
Target Start/End: Original strand, 38449227 - 38449464
Alignment:
Q  21 ccctctcatcaacaacgataaccatagagaggagatgatctgaaacgcacaatagagttagcggcggctgatttggttcttcctcaaccggtacctttat 120  Q
    |||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38449227 ccctctcatcaacaacgataaccaaagagaggagatgatctgaaacacacaatagagttagcggcggctgatttggttcttcctcaaccggtacctttat 38449326  T
Q  121 gccttaagttctcttcagatggggagaagagagagt-ttgccgtgtacggtgtattggggac----------tttatattggatggccattagg--ttcc 207  Q
    |||| ||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||          ||||||||||||| ||||||||  ||||    
T  38449327 gcctcaagttctcttcagatggggagaagagagagtattgccgtgtacggtatattggggaccatagcctcttttatattggatgaccattagggtttcc 38449426  T
Q  208 cattattccgttaatgggccatccggacatccactcat 245  Q
    |||||||||||||||||| |||||||||||||||||||    
T  38449427 cattattccgttaatgggtcatccggacatccactcat 38449464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 160; E-Value: 2e-85
Query Start/End: Original strand, 21 - 245
Target Start/End: Original strand, 38455714 - 38455951
Alignment:
Q  21 ccctctcatcaacaacgataaccatagagaggagatgatctgaaacgcacaatagagttagcggcggctgatttggttcttcctcaaccggtacctttat 120  Q
    |||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38455714 ccctctcatcaacaacgataaccaaagagaggagatgatctgaaacacacaatagagttagcggcggctgatttggttcttcctcaaccggtacctttat 38455813  T
Q  121 gccttaagttctcttcagatggggagaagagagagt-ttgccgtgtacggtgtattggggac----------tttatattggatggccattagg--ttcc 207  Q
    |||| ||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||          ||||||||||||| ||||||||  ||||    
T  38455814 gcctcaagttctcttcagatggggagaagagagagtattgccgtgtacggtatattggggaccatagcctcttttatattggatgaccattagggtttcc 38455913  T
Q  208 cattattccgttaatgggccatccggacatccactcat 245  Q
    |||||||||||||||||| |||||||||||||||||||    
T  38455914 cattattccgttaatgggtcatccggacatccactcat 38455951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 159; E-Value: 9e-85
Query Start/End: Original strand, 21 - 245
Target Start/End: Complemental strand, 8331782 - 8331546
Alignment:
Q  21 ccctctcatcaacaacgataaccatagagaggagatgatctgaaacgcacaatagagttagcggcggctgatttggttcttcctcaaccggtacctttat 120  Q
    ||||||| |||||||||||||||| |||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8331782 ccctctcgtcaacaacgataaccaaagagaggagatgatctaaaacacacaatagagttagcggcggctgatttggttcttcctcaaccggtacctttat 8331683  T
Q  121 gccttaagttctcttcagatggggagaagagagagtttgccgtgtacggtgtattggggac----------tttatattggatggccattagg--ttccc 208  Q
    |||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||          ||||||||||||| ||||||||  |||||    
T  8331682 gcctcaagttctcttcagatggggagaagagagagtttgccgtgtacagtgtattggggaccatagcctcttttatattggatgaccattagggtttccc 8331583  T
Q  209 attattccgttaatgggccatccggacatccactcat 245  Q
    ||||||||||||||||| |||||||||||||||||||    
T  8331582 attattccgttaatgggtcatccggacatccactcat 8331546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 156; E-Value: 6e-83
Query Start/End: Original strand, 21 - 260
Target Start/End: Original strand, 10760814 - 10761064
Alignment:
Q  21 ccctctcatcaacaacgataaccatagagaggagatgatctgaaacgcacaatagagttagcggcggctgatttggttcttcctcaaccggtacctttat 120  Q
    |||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||| ||||||||||    
T  10760814 ccctctcatcaacaacgataaccaaagagaggagatgatctgaaacacacaatagagttagcggcgactgatttggttcttcctcaaccagtacctttat 10760913  T
Q  121 gccttaagttctcttcagatggggagaagagagagt-ttgccgtgtacggtgtattggggac----------tttatattggatggccattagg--ttcc 207  Q
    |||| ||||||||||||||||||||||||||||||| ||| |||||||||| ||||||||||          |||||||||||||| |||||||  ||||    
T  10760914 gcctcaagttctcttcagatggggagaagagagagtattgtcgtgtacggtatattggggaccatagcctcttttatattggatggtcattagggtttcc 10761013  T
Q  208 cattattccgttaatgggccatccggacatccactcatgttgagtccatatca 260  Q
    |||||||||||||||||||||||||||||||||||||  ||||||||||||||    
T  10761014 cattattccgttaatgggccatccggacatccactca--ttgagtccatatca 10761064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 149; E-Value: 9e-79
Query Start/End: Original strand, 21 - 260
Target Start/End: Original strand, 30051266 - 30051514
Alignment:
Q  21 ccctctcatcaacaacgataaccatagagaggagatgatctgaaacgcacaatagagttagcggcggctgatttggttcttcctcaaccggtacctttat 120  Q
    |||||| ||| ||||| ||||||| ||||||||||||||||||||| |||||||||||||||| ||||||||||| ||||||||||||||||||||||||    
T  30051266 ccctctaatcgacaacaataaccaaagagaggagatgatctgaaacacacaatagagttagcgacggctgatttgattcttcctcaaccggtacctttat 30051365  T
Q  121 gccttaagttctcttcagatggggagaagagagagtttgccgtgtacggtgtattggggac----------tttatattggatggccatta-ggttccca 209  Q
    |||| |||||||||||||||||| |||||||||||||||||||||||||| ||||||||||          |||||||||||||||||||| |||| |||    
T  30051366 gcctcaagttctcttcagatgggcagaagagagagtttgccgtgtacggtatattggggaccatagcctcttttatattggatggccattagggtttcca 30051465  T
Q  210 ttattccgttaatgggccatccggacatccactcatgttgagtccatatca 260  Q
    ||||||||||||||||||||||||||||||||||  ||| |||||||||||    
T  30051466 ttattccgttaatgggccatccggacatccactc--gttaagtccatatca 30051514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 21 - 260
Target Start/End: Original strand, 55003576 - 55003817
Alignment:
Q  21 ccctctcatcaacaacgataaccatagagaggagatgatctgaaacgcacaatagagttagcggcggctgatttggttcttcctcaaccggtacctttat 120  Q
    |||||| ||||||||||||||||| |||||  |||||||||||||  ||||||||||||||||||||||||||||||||   ||||| ||||||||||||    
T  55003576 ccctctaatcaacaacgataaccaaagagaaaagatgatctgaaatacacaatagagttagcggcggctgatttggttc---ctcaatcggtacctttat 55003672  T
Q  121 gccttaagttctcttcagatggggagaagagagagtttgccgtgtacggtgtattggggac----------tttatattggatggccattaggttcccat 210  Q
    |||| |||||||||||||||||||||||||||||||||| |||||||||| ||||||||||          ||||||||||||| |     | |||||||    
T  55003673 gcctcaagttctcttcagatggggagaagagagagtttgtcgtgtacggtatattggggaccataacctcttttatattggatgac-----gtttcccat 55003767  T
Q  211 tattccgttaatgggccatccggacatccactcatgttgagtccatatca 260  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  55003768 tattccgttaatgggtcatccggacatccactcatgttgagtccatatca 55003817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 79 - 260
Target Start/End: Original strand, 26429639 - 26429833
Alignment:
Q  79 tagcggcggctgatttggttcttcctcaaccggtacctttatgccttaagttctcttcagatggggagaagagagagt-ttgccgtgtacggtgtattgg 177  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||| ||||||    
T  26429639 tagcggcggctgatttggttcttcctcaaccggtacctttatgcctcaagttctcttcagatggggagaagagagagtattgccgtgtacggtatattgg 26429738  T
Q  178 ggac----------tttatattggatggccattagg--ttcccattattccgttaatgggccatccggacatccactcatgttgagtccatatca 260  Q
    ||||          |||||| |||||| ||||||||  |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  26429739 ggaccatagcctcttttatactggatgaccattagggtttcccattattccgttaatgggccatccggacatccactcatgttgagcccatatca 26429833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 58 - 156
Target Start/End: Complemental strand, 13837632 - 13837534
Alignment:
Q  58 atctgaaacgcacaatagagttagcggcggctgatttggttcttcctcaaccggtacctttatgccttaagttctcttcagatggggagaagagagagt 156  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  13837632 atctgaaacacacaatagagttagcggcggctgatttggttcttcctcaaccggtacctttatgcctcaagttctcttcagatggggagaagagagagt 13837534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 77 - 258
Target Start/End: Original strand, 48128260 - 48128451
Alignment:
Q  77 gttagcggcggctgatttggttcttcctcaaccggtacctttatgccttaagttctcttcagatggggagaagagagagtttgccgtgtacggtgtattg 176  Q
    |||||| ||||||||||||||||||||||||| |||||||||||||||| |||||||||||||  |||||||||||  |||||||||||||||| |||||    
T  48128260 gttagcagcggctgatttggttcttcctcaactggtacctttatgcctttagttctcttcagacagggagaagagaatgtttgccgtgtacggtatattg 48128359  T
Q  177 gggac----------tttatattggatggccatta--ggttcccattattccgttaatgggccatccggacatccactcatgttgagtccatat 258  Q
    |||||          ||||||||||||| ||||||  | || ||||||||||||||||||| ||||||||||||||||||  ||||||||||||    
T  48128360 gggaccatagcctcttttatattggatgaccattaaggttttccattattccgttaatgggtcatccggacatccactca--ttgagtccatat 48128451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 21 - 133
Target Start/End: Original strand, 11846227 - 11846340
Alignment:
Q  21 ccctctcatcaacaacgataaccatagagaggagatgatctgaaacgcacaatagagttagcggcggctga-tttggttcttcctcaaccggtaccttta 119  Q
    |||||||||||||||||||||||| |||||| |||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||| |||||||    
T  11846227 ccctctcatcaacaacgataaccaaagagagaagatgatctgaaacacacaatagagttagcggcggctgattttggttcttcctcaaccggaaccttta 11846326  T
Q  120 tgccttaagttctc 133  Q
    ||||  ||||||||    
T  11846327 tgccgcaagttctc 11846340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 77 - 260
Target Start/End: Complemental strand, 28964811 - 28964626
Alignment:
Q  77 gttagcggcggctgatttggttcttcctcaaccggtacctttatgccttaagttctcttcagatggggagaagagagagtttgccgtgtacggtgtattg 176  Q
    ||||||||||||| ||||||||||||||||||||        ||||||  |||||||||||||||||||||||||||||||| ||||||||||| |||||    
T  28964811 gttagcggcggctaatttggttcttcctcaaccg--------atgcctcgagttctcttcagatggggagaagagagagttttccgtgtacggtatattg 28964720  T
Q  177 gggac----------tttatattggatggccattagg--ttcccattattccgttaatgggccatccggacatccactcatgttgagtccatatca 260  Q
    |||||          ||||||||||||| ||||||||  ||| ||||||||||||||||| |||||||||||||||||||  ||||||||||||||    
T  28964719 gggaccatagcctcttttatattggatgaccattagggtttctcattattccgttaatggaccatccggacatccactca--ttgagtccatatca 28964626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 54 - 221
Target Start/End: Complemental strand, 13445020 - 13444840
Alignment:
Q  54 gatgatctgaaacgcacaatagagttagcggcggctgatttggttcttcctcaaccggtacctttatgccttaagttctcttcagatggggagaagagag 153  Q
    ||||||||||| | || || || ||||| |||||||||||||||||||||||||||| ||| ||||||||| ||||||||||||||||||||||||||||    
T  13445020 gatgatctgaaccacaaaacagggttagtggcggctgatttggttcttcctcaaccgatacttttatgcctcaagttctcttcagatggggagaagagag 13444921  T
Q  154 agt-ttgccgtgtacggtgtattggggac----------tttatattggatggccattagg--ttcccattattccgttaa 221  Q
    | | | |  ||||||||||||||||||||          ||||||||||||||||||||||  ||||||||||| ||||||    
T  13444920 aatatcgttgtgtacggtgtattggggaccataacctattttatattggatggccattagggtttcccattatttcgttaa 13444840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 54 - 181
Target Start/End: Original strand, 53069254 - 53069373
Alignment:
Q  54 gatgatctgaaacgcacaataga--gttagcggcggctgatttggttcttcctcaaccggtacctttatgccttaagttctcttcagatggggagaagag 151  Q
    ||||||||||||| ||||| | |  ||||||||||||||||||||||||||||||||||||||||          |||||||||||||||||||||||||    
T  53069254 gatgatctgaaacacacaaaatatggttagcggcggctgatttggttcttcctcaaccggtacct----------agttctcttcagatggggagaagag 53069343  T
Q  152 agagtttgccgtgtacggtgtattggggac 181  Q
    |||||||||| |||||||||||||| ||||    
T  53069344 agagtttgccatgtacggtgtattgaggac 53069373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 77 - 181
Target Start/End: Original strand, 12108891 - 12108990
Alignment:
Q  77 gttagcggcggctgatttggttcttcctcaaccggtacctttatgccttaagttctcttcagatggggagaagagagagtttgccgtgtacggtgtattg 176  Q
    |||||||||| ||||||||||||||| | ||||||||||||||||||| |||     ||||||| || |||| ||| ||||||||||||||| |||||||    
T  12108891 gttagcggcgactgatttggttcttctttaaccggtacctttatgcctcaag-----ttcagatcggaagaaaagatagtttgccgtgtacgatgtattg 12108985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 133 - 241
Target Start/End: Original strand, 13367114 - 13367233
Alignment:
Q  133 cttcagatggggagaagagagagtttgccgtgtacggtgtattggggac---------tttatattggatggccattagg--ttcccattattccgttaa 221  Q
    ||||||||||||||||||| |  |||||  |||||||| ||||||||||         |||||||||||||| |||||||  ||||||||||||||||||    
T  13367114 cttcagatggggagaagagcggttttgctatgtacggtatattggggaccatagcctctttatattggatggtcattagggtttcccattattccgttaa 13367213  T
Q  222 tgggccatccggacatccac 241  Q
    ||| |||||| |||||||||    
T  13367214 tggaccatccagacatccac 13367233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 208 - 260
Target Start/End: Original strand, 17601897 - 17601949
Alignment:
Q  208 cattattccgttaatgggccatccggacatccactcatgttgagtccatatca 260  Q
    |||||||||||||||||| ||| |||||||||| |||||||||||||||||||    
T  17601897 cattattccgttaatgggtcattcggacatccaatcatgttgagtccatatca 17601949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 90 - 181
Target Start/End: Original strand, 2982458 - 2982549
Alignment:
Q  90 gatttggttcttcctcaaccggtacctttatgccttaagttctcttcagatggggagaagagagagtttgccgtgtacggtgtattggggac 181  Q
    ||||||||||||| ||||   ||| ||||||| |||||||||||||||||| ||||||| |||||||| ||||| || ||| |||| |||||    
T  2982458 gatttggttcttcttcaataagtatctttatgtcttaagttctcttcagatagggagaaaagagagttcgccgtatatggtatatttgggac 2982549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 203 - 245
Target Start/End: Original strand, 11846335 - 11846377
Alignment:
Q  203 gttcccattattccgttaatgggccatccggacatccactcat 245  Q
    |||| ||||||||||||||||||||||||||||||||||||||    
T  11846335 gttctcattattccgttaatgggccatccggacatccactcat 11846377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 77 - 119
Target Start/End: Original strand, 24643773 - 24643815
Alignment:
Q  77 gttagcggcggctgatttggttcttcctcaaccggtaccttta 119  Q
    ||||||||||||||||||||||||| |||||||||||||||||    
T  24643773 gttagcggcggctgatttggttctttctcaaccggtaccttta 24643815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 77 - 158
Target Start/End: Complemental strand, 34300429 - 34300348
Alignment:
Q  77 gttagcggcggctgatttggttcttcctcaaccggtacctttatgccttaagttctcttcagatggggagaagagagagttt 158  Q
    |||||||||| || |||||||| ||| ||||||||||| || |||||| |||||||||||| | | ||||| ||||||||||    
T  34300429 gttagcggcgacttatttggttattcttcaaccggtactttcatgcctcaagttctcttcatacgaggagatgagagagttt 34300348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 80 - 245
Target Start/End: Complemental strand, 46656610 - 46656439
Alignment:
Q  80 agcggcggctgatttggttcttcctcaaccggtacctttatgccttaagttctcttcagatggggagaagagagagtttgccgtgtacggtgtattgggg 179  Q
    |||||||  |||||||| ||||||| |||||| ||||||||| ||  | |||| |||||||||||||||||||  ||||      ||||||||||||||     
T  46656610 agcggcgattgatttggctcttccttaaccggcacctttatgtctctaattctattcagatggggagaagagaatgttt------tacggtgtattggga 46656517  T
Q  180 ac----------tttatattggatggccattagg--ttcccattattccgttaatgggccatccggacatccactcat 245  Q
    ||          ||||||||||||  ||| ||||  ||||||||||||||||||| || |||||||||||||||||||    
T  46656516 accataacctcttttatattggataaccaatagggtttcccattattccgttaataggtcatccggacatccactcat 46656439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 207 - 245
Target Start/End: Original strand, 23138779 - 23138817
Alignment:
Q  207 ccattattccgttaatgggccatccggacatccactcat 245  Q
    ||||||||||||||||||| |||||||||||||||||||    
T  23138779 ccattattccgttaatgggtcatccggacatccactcat 23138817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 181 - 241
Target Start/End: Complemental strand, 9760543 - 9760481
Alignment:
Q  181 ctttatattggatggccattagg--ttcccattattccgttaatgggccatccggacatccac 241  Q
    |||||||||||||| ||||||||  |||| |||||||| ||||||| |||||| |||||||||    
T  9760543 ctttatattggatgaccattagggtttcctattattcctttaatggaccatccagacatccac 9760481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 21 - 56
Target Start/End: Original strand, 17593446 - 17593481
Alignment:
Q  21 ccctctcatcaacaacgataaccatagagaggagat 56  Q
    |||||||||||||||||||||||| |||||||||||    
T  17593446 ccctctcatcaacaacgataaccaaagagaggagat 17593481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 183; Significance: 4e-99; HSPs: 17)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 183; E-Value: 4e-99
Query Start/End: Original strand, 21 - 260
Target Start/End: Original strand, 25381699 - 25381951
Alignment:
Q  21 ccctctcatcaacaacgataaccatagagaggagatgatctgaaacgcacaatagagttagcggcggctgatttggttcttcctcaaccggtacctttat 120  Q
    |||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25381699 ccctctcatcaacaacgataaccaaagagaggagatgatctgaaacacacaatagagttagcggcggctgatttggttcttcctcaaccggtacctttat 25381798  T
Q  121 gccttaagttctcttcagatggggagaagagagagt-ttgccgtgtacggtgtattggggac----------tttatattggatggccattagg--ttcc 207  Q
    |||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||          ||||||||||||||||||||||  ||||    
T  25381799 gcctcaagttctcttcagatggggagaagagagagtattgccgtgtacggtgtattggggaccatagcctcttttatattggatggccattagggtttcc 25381898  T
Q  208 cattattccgttaatgggccatccggacatccactcatgttgagtccatatca 260  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  25381899 cattattccattaatgggccatccggacatccactcatgttgagtccatatca 25381951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 21 - 245
Target Start/End: Original strand, 25387668 - 25387905
Alignment:
Q  21 ccctctcatcaacaacgataaccatagagaggagatgatctgaaacgcacaatagagttagcggcggctgatttggttcttcctcaaccggtacctttat 120  Q
    |||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25387668 ccctctcatcaacaacgataaccaaagagaggagatgatctgaaacacacaatagagttagcggcggctgatttggttcttcctcaaccggtacctttat 25387767  T
Q  121 gccttaagttctcttcagatggggagaagagagagt-ttgccgtgtacggtgtattggggac----------tttatattggatggccattagg--ttcc 207  Q
    |||| ||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||          ||||||||||||||||||||||  ||||    
T  25387768 gcctcaagttctcttcagatggggagaagagagagtattgccgtgtacggtatattggggaccatagcctcttttatattggatggccattagggtttcc 25387867  T
Q  208 cattattccgttaatgggccatccggacatccactcat 245  Q
    ||||||||| ||||||||||||||||||||||||||||    
T  25387868 cattattccattaatgggccatccggacatccactcat 25387905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 163; E-Value: 4e-87
Query Start/End: Original strand, 18 - 260
Target Start/End: Complemental strand, 31051543 - 31051290
Alignment:
Q  18 caaccctctcatcaacaacgataaccatagagaggagatgatctgaaacgcacaatagagttagcggcggctgatttggttcttcctcaaccggtacctt 117  Q
    ||||||| ||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  31051543 caaccctttcatcaacaacgataaccaaagagaggagatgatctgaaacacacaatagagttagcggcggctgatttggttcttccttaaccggtacctt 31051444  T
Q  118 tatgccttaagttctcttcagatggggagaagagagagt-ttgccgtgtacggtgtattggggac----------tttatattggatggccattagg--t 204  Q
    ||||||| ||||||||||||||||||||||||||||||| ||| |||||||||| ||||||||||          ||||||||||||||||||||||  |    
T  31051443 tatgcctcaagttctcttcagatggggagaagagagagtattgtcgtgtacggtatattggggaccatagcctcttttatattggatggccattagggtt 31051344  T
Q  205 tcccattattccgttaatgggccatccggacatccactcatgttgagtccatatca 260  Q
    ||||||||||||||||||||||||||||||||||||||||  ||||||||||||||    
T  31051343 tcccattattccgttaatgggccatccggacatccactca--ttgagtccatatca 31051290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 163; E-Value: 4e-87
Query Start/End: Original strand, 21 - 260
Target Start/End: Complemental strand, 34739981 - 34739732
Alignment:
Q  21 ccctctcatcaacaacgataaccatagagaggagatgatctgaaacgcacaatagagttagcggcggctgatttggttcttcctcaaccggtacctttat 120  Q
    |||||||||||||||||||||||| |||||| | |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34739981 ccctctcatcaacaacgataaccaaagagagaaaatgatctgaaacacacaatagagttagcggcggctgatttggttcttcctcaaccggtacctttat 34739882  T
Q  121 gccttaagttctcttcagatggggagaagagagagtttgccgtgtacggtgtattggggac----------tttatattggatggccattagg--ttccc 208  Q
    |||| ||||||||||||||| |||||||||||||||||| |||||||||| ||||||||||          ||||||||||||||||||||||  |||||    
T  34739881 gcctcaagttctcttcagattgggagaagagagagtttgtcgtgtacggtatattggggaccacagcctcttttatattggatggccattagggtttccc 34739782  T
Q  209 attattccgttaatgggccatccggacatccactcatgttgagtccatatca 260  Q
    ||||||||||||||||||||||||||||||||||||  ||||||||||||||    
T  34739781 attattccgttaatgggccatccggacatccactca--ttgagtccatatca 34739732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 160; E-Value: 2e-85
Query Start/End: Original strand, 21 - 260
Target Start/End: Complemental strand, 50306185 - 50305941
Alignment:
Q  21 ccctctcatcaacaacgataaccatagagaggagatgatctgaaacgcacaatagagttagcggcggctgatttggttcttcctcaaccggtacctttat 120  Q
    |||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||           
T  50306185 ccctctcatcaacaacgataaccaaagagaggagatgatctgaaacacacaatagagttagcggcggctgatttggttcttcctcaaccggta------- 50306093  T
Q  121 gccttaagttctcttcagatggggagaagagagagtttgccgtgtacggtgtattggggac----------tttatattggatggccattagg--ttccc 208  Q
    |||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||          ||||||||||||| ||||||||  |||||    
T  50306092 gcctcaagttctcttcagatggggagaagagagaatttgccgtgtacggtgtattggggaccatagcctcttttatattggatgaccattagggtttccc 50305993  T
Q  209 attattccgttaatgggccatccggacatccactcatgttgagtccatatca 260  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  50305992 attattccgttaatgggccatccggacatccactcatgttgagtccatatca 50305941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 52 - 260
Target Start/End: Complemental strand, 1078209 - 1077988
Alignment:
Q  52 gagatgatctgaaacgcacaatagagttagcggcggctgatttggttcttcctcaaccggtacctttatgccttaagttctcttcagatggggagaagag 151  Q
    ||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||    
T  1078209 gagatgatctgaaacacacaatagagttagcggccgctgatttggttcttcctcaaccggtacctttatgcctcaagttctcttcagatggtgagaagag 1078110  T
Q  152 agagt-ttgccgtgtacggtgtattggggac----------tttatattggatggccattagg--ttcccattattccgttaatgggccatccggacatc 238  Q
    ||||| |||||||||||||||||||||||||          ||||||||||||||||||||||  |||||||||||||||||||||| ||||||||||||    
T  1078109 agagtattgccgtgtacggtgtattggggaccatagcctcttttatattggatggccattagggtttcccattattccgttaatgggtcatccggacatc 1078010  T
Q  239 cactcatgttgagtccatatca 260  Q
    ||||||||||||||||||||||    
T  1078009 cactcatgttgagtccatatca 1077988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 18 - 260
Target Start/End: Complemental strand, 31058043 - 31057790
Alignment:
Q  18 caaccctctcatcaacaacgataaccatagagaggagatgatctgaaacgcacaatagagttagcggcggctgatttggttcttcctcaaccggtacctt 117  Q
    ||||||||||||||||||||||||||| |||||||||||||||| |||| ||||||||||||||||||| ||||||||||||||||| ||||||||||||    
T  31058043 caaccctctcatcaacaacgataaccaaagagaggagatgatctaaaacacacaatagagttagcggcgactgatttggttcttccttaaccggtacctt 31057944  T
Q  118 tatgccttaagttctcttcagatggggagaagagagagt-ttgccgtgtacggtgtattgggga----------ctttatattggatggccattagg--t 204  Q
    ||||||| ||||||||||||||||||||||||||||||| ||| |||||||||| |||||||||           ||||||||| ||||||||||||  |    
T  31057943 tatgcctcaagttctcttcagatggggagaagagagagtattgtcgtgtacggtatattggggatcatagcctcttttatattgtatggccattagggtt 31057844  T
Q  205 tcccattattccgttaatgggccatccggacatccactcatgttgagtccatatca 260  Q
    ||||||||||||||||||||| ||||||||||||||||||  ||||||||||||||    
T  31057843 tcccattattccgttaatgggtcatccggacatccactca--ttgagtccatatca 31057790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 22 - 260
Target Start/End: Original strand, 8093011 - 8093259
Alignment:
Q  22 cctctcatcaacaacgataaccatagagaggagatgatctgaaacgcacaa-tagagttagcggcggctgatttggttcttcctcaaccggtacctttat 120  Q
    ||||||||||||||||||||||| ||||| |||||||||||||||  |||| ||| ||||||||||||||||||||||||||||||||||||||||||||    
T  8093011 cctctcatcaacaacgataaccaaagagatgagatgatctgaaacaaacaactag-gttagcggcggctgatttggttcttcctcaaccggtacctttat 8093109  T
Q  121 gccttaagttctcttcagatggggagaagagagagtttgccgtgtacggtgtattggggac----------tttatattggatggccattagg--ttccc 208  Q
    |||| ||||||||||||||||||||||| |||||||||||||||| |||| ||||||||||          |||||||| ||||  | |||||  |||||    
T  8093110 gcctcaagttctcttcagatggggagaaaagagagtttgccgtgttcggtatattggggaccatagcctcttttatatttgatgatcgttagggtttccc 8093209  T
Q  209 attattccgttaatgggccatccggacatccactcatgttgagtccatatca 260  Q
    ||||||||||||||||| ||||||||||||||||||  ||||||||||||||    
T  8093210 attattccgttaatgggtcatccggacatccactca--ttgagtccatatca 8093259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 77 - 258
Target Start/End: Complemental strand, 44409940 - 44409748
Alignment:
Q  77 gttagcggcggctgatttggttcttcctcaaccggtacctttatgccttaagttctcttcagatggggagaagagagag-tttgccgtgtacggtgtatt 175  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||| |||| ||||||  |||||||    
T  44409940 gttagcggcggctgatttggttcttcctcaaccagtacctttatgcctcaagttctcttcagatggggagaagagagagttttgtcgtgtatagtgtatt 44409841  T
Q  176 ggggac----------tttatattggatggccattagg--ttcccattattccgttaatgggccatccggacatccactcatgttgagtccatat 258  Q
    ||||||          ||||||||||||||||||||||  ||| |||||||||||||||||||||||||||||||||||||  ||||||||||||    
T  44409840 ggggaccataacctcttttatattggatggccattagggtttctcattattccgttaatgggccatccggacatccactca--ttgagtccatat 44409748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 77 - 241
Target Start/End: Original strand, 24926981 - 24927157
Alignment:
Q  77 gttagcggcggctgatttggttcttcctcaaccggtacctttatgccttaagttctcttcagatggggagaagagagagtttgccgtgtacggtgtattg 176  Q
    ||||| ||| |||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||| ||  ||| || ||||||    
T  24926981 gttagtggcagctgatttggttcttcctcaaccggtacctatatgcctcaagttctcttcagatggggagaagagagagttttccacgtatggagtattg 24927080  T
Q  177 gggac----------tttatattggatggccattagg--ttcccattattccgttaatgggccatccggacatccac 241  Q
    || ||          ||||||||||||| ||||||||  |||||||||||||||||||||||||||| |||||||||    
T  24927081 ggaaccatagcctcttttatattggatgaccattagggtttcccattattccgttaatgggccatccagacatccac 24927157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 77 - 238
Target Start/End: Original strand, 38152184 - 38152356
Alignment:
Q  77 gttagcggcggctgatttggttcttcctcaaccggtacctttatgccttaagttctcttcagatggggagaagagagagtttgccgtgtacggtgtattg 176  Q
    ||||||||| ||| |||||||||||| ||||||||||||||||||| | ||||| |||| ||||||||||||||  ||||||| ||||||||||||||||    
T  38152184 gttagcggcagctaatttggttcttcttcaaccggtacctttatgcttcaagttttctttagatggggagaagaacgagtttgtcgtgtacggtgtattg 38152283  T
Q  177 gggac----------tttatattggatggccattagg-ttcccattattccgttaatgggccatccggacatc 238  Q
    || ||          |||||||||||||| ||||||| |||||||||||||||||||||| ||||||||||||    
T  38152284 ggaaccatagcctcttttatattggatggtcattaggtttcccattattccgttaatgggtcatccggacatc 38152356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 88 - 161
Target Start/End: Original strand, 24963940 - 24964013
Alignment:
Q  88 ctgatttggttcttcctcaaccggtacctttatgccttaagttctcttcagatggggagaagagagagtttgcc 161  Q
    |||||||||||||||||||||| |||| ||||||||| |||| |||||||||||||||||||||||||||||||    
T  24963940 ctgatttggttcttcctcaaccagtacatttatgcctcaagtcctcttcagatggggagaagagagagtttgcc 24964013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 23 - 260
Target Start/End: Complemental strand, 27955158 - 27954907
Alignment:
Q  23 ctctcatcaacaacgataaccatagagagga---gatgatctgaaacgcacaataga--gttagcggcggctgatttggttcttcctcaaccggtacctt 117  Q
    |||||| ||||||||||||  | ||||||||   ||||||||||||| ||||| | |  |||| || || ||||||| ||| ||||||||||||||||||    
T  27955158 ctctcaacaacaacgataaagaaagagaggatgtgatgatctgaaacacacaacaaaatgttaacgacgactgatttagttattcctcaaccggtacctt 27955059  T
Q  118 tatgccttaagttctcttcagatggggagaagagagagt-ttgccgtgtacggtgtattgggga----------ctttatattggatggccattagg--t 204  Q
    |||| ||||||||||| ||||||||||||||||||  || ||| |||||   ||||||||||||           ||||||||||||| |||||| |  |    
T  27955058 tatgtcttaagttctc-tcagatggggagaagagaatgtattgtcgtgt---gtgtattggggatcataacatcttttatattggatgaccattatgatt 27954963  T
Q  205 tcccattattccgttaatgggccatccggacatccactcatgttgagtccatatca 260  Q
    ||||||||||||  ||||| |||||||  |||||||||||| ||||||||||||||    
T  27954962 tcccattattccactaatgagccatccatacatccactcatattgagtccatatca 27954907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 208 - 260
Target Start/End: Original strand, 12183975 - 12184027
Alignment:
Q  208 cattattccgttaatgggccatccggacatccactcatgttgagtccatatca 260  Q
    ||||||||||||||| ||||||||||||||| |||||| ||||||||||||||    
T  12183975 cattattccgttaattggccatccggacatctactcatattgagtccatatca 12184027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 219 - 260
Target Start/End: Original strand, 25275421 - 25275462
Alignment:
Q  219 taatgggccatccggacatccactcatgttgagtccatatca 260  Q
    ||||||| ||||||||||||||||||||||||||||||||||    
T  25275421 taatgggtcatccggacatccactcatgttgagtccatatca 25275462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 88 - 135
Target Start/End: Original strand, 12183820 - 12183867
Alignment:
Q  88 ctgatttggttcttcctcaaccggtacctttatgccttaagttctctt 135  Q
    ||||||||||| || |||||||| ||||||||||||| ||||||||||    
T  12183820 ctgatttggttatttctcaaccgctacctttatgcctcaagttctctt 12183867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 96 - 165
Target Start/End: Original strand, 33458149 - 33458218
Alignment:
Q  96 gttcttcctcaaccggtacctttatgccttaagttctcttcagatggggagaagagagagtttgccgtgt 165  Q
    |||||| |||||| |||| ||||||| ||  |||||| |||  ||||| |||||||||||||||||||||    
T  33458149 gttctttctcaactggtagctttatgtctatagttctattcgtatgggaagaagagagagtttgccgtgt 33458218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 181; Significance: 7e-98; HSPs: 27)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 181; E-Value: 7e-98
Query Start/End: Original strand, 21 - 260
Target Start/End: Complemental strand, 24287982 - 24287731
Alignment:
Q  21 ccctctcatcaacaacgataaccatagagaggagatgatctgaaacgcacaatagagttagcggcggctgatttggttcttcctcaaccggtacctttat 120  Q
    |||||| ||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24287982 ccctctaatcaacaacgataaccaaagagaggagatgatctgaaacacacaatagagttagcggcggctgatttggttcttcctcaaccggtacctttat 24287883  T
Q  121 gccttaagttctcttcagatggggagaagagagagt-ttgccgtgtacggtgtattggggac---------tttatattggatggccattagg--ttccc 208  Q
    |||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||         ||||||||||||| ||||||||  |||||    
T  24287882 gcctcaagttctcttcagatggggagaagagagagtattgccgtgtacggtgtattggggacatagcctcttttatattggatgaccattagggtttccc 24287783  T
Q  209 attattccgttaatgggccatccggacatccactcatgttgagtccatatca 260  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24287782 attattccgttaatgggccatccggacatccactcatgttgagtccatatca 24287731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 163; E-Value: 4e-87
Query Start/End: Original strand, 21 - 245
Target Start/End: Original strand, 10733516 - 10733750
Alignment:
Q  21 ccctctcatcaacaacgataaccatagagaggagatgatctgaaacgcacaatagagttagcggcggctgatttggttcttcctcaaccggtacctttat 120  Q
    |||||||||||||||||||||||| |||||||||||||| |||||| |||||||||||||||| |||||||||||||||||||||||||| |||||||||    
T  10733516 ccctctcatcaacaacgataaccaaagagaggagatgatttgaaacacacaatagagttagcgacggctgatttggttcttcctcaaccgatacctttat 10733615  T
Q  121 gccttaagttctcttcagatggggagaagagagagtttgccgtgtacggtgtattggggac--------tttatattggatggccattagg--ttcccat 210  Q
    |||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||         |||||||||||||||||||||  |||||||    
T  10733616 gcctcaaattctcttcagatggggagaagagagagtttgccgtgtacggtgtattggggaccatagcctcttatattggatggccattagggtttcccat 10733715  T
Q  211 tattccgttaatgggccatccggacatccactcat 245  Q
    |||||||||||||||||||||||||||||||||||    
T  10733716 tattccgttaatgggccatccggacatccactcat 10733750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 163; E-Value: 4e-87
Query Start/End: Original strand, 21 - 245
Target Start/End: Original strand, 10947285 - 10947519
Alignment:
Q  21 ccctctcatcaacaacgataaccatagagaggagatgatctgaaacgcacaatagagttagcggcggctgatttggttcttcctcaaccggtacctttat 120  Q
    |||||||||||||||||||||||| |||||||||||||| |||||| |||||||||||||||| |||||||||||||||||||||||||| |||||||||    
T  10947285 ccctctcatcaacaacgataaccaaagagaggagatgatttgaaacacacaatagagttagcgacggctgatttggttcttcctcaaccgatacctttat 10947384  T
Q  121 gccttaagttctcttcagatggggagaagagagagtttgccgtgtacggtgtattggggac--------tttatattggatggccattagg--ttcccat 210  Q
    |||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||         |||||||||||||||||||||  |||||||    
T  10947385 gcctcaaattctcttcagatggggagaagagagagtttgccgtgtacggtgtattggggaccatagcctcttatattggatggccattagggtttcccat 10947484  T
Q  211 tattccgttaatgggccatccggacatccactcat 245  Q
    |||||||||||||||||||||||||||||||||||    
T  10947485 tattccgttaatgggccatccggacatccactcat 10947519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 159; E-Value: 9e-85
Query Start/End: Original strand, 21 - 245
Target Start/End: Original strand, 10739503 - 10739737
Alignment:
Q  21 ccctctcatcaacaacgataaccatagagaggagatgatctgaaacgcacaatagagttagcggcggctgatttggttcttcctcaaccggtacctttat 120  Q
    |||||||||||||||||||||||| |||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  10739503 ccctctcatcaacaacgataaccaaagagaggagatgatttgaaacacacaatagagttagcggcggctgatttggttcttcctcaaccgatacctttat 10739602  T
Q  121 gccttaagttctcttcagatggggagaagagagagtttgccgtgtacggtgtattggggac--------tttatattggatggccattagg--ttcccat 210  Q
    |||| || |||||||||||||||||||||||||||||| ||||||||||||||||||||||         |||||||||||||||||||||  |||||||    
T  10739603 gcctcaaattctcttcagatggggagaagagagagtttaccgtgtacggtgtattggggaccatagcctcttatattggatggccattagggtttcccat 10739702  T
Q  211 tattccgttaatgggccatccggacatccactcat 245  Q
    ||||||||||||||| |||||||||||||||||||    
T  10739703 tattccgttaatgggtcatccggacatccactcat 10739737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 159; E-Value: 9e-85
Query Start/End: Original strand, 21 - 245
Target Start/End: Original strand, 10953272 - 10953506
Alignment:
Q  21 ccctctcatcaacaacgataaccatagagaggagatgatctgaaacgcacaatagagttagcggcggctgatttggttcttcctcaaccggtacctttat 120  Q
    |||||||||||||||||||||||| |||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  10953272 ccctctcatcaacaacgataaccaaagagaggagatgatttgaaacacacaatagagttagcggcggctgatttggttcttcctcaaccgatacctttat 10953371  T
Q  121 gccttaagttctcttcagatggggagaagagagagtttgccgtgtacggtgtattggggac--------tttatattggatggccattagg--ttcccat 210  Q
    |||| || |||||||||||||||||||||||||||||| ||||||||||||||||||||||         |||||||||||||||||||||  |||||||    
T  10953372 gcctcaaattctcttcagatggggagaagagagagtttaccgtgtacggtgtattggggaccatagcctcttatattggatggccattagggtttcccat 10953471  T
Q  211 tattccgttaatgggccatccggacatccactcat 245  Q
    ||||||||||||||| |||||||||||||||||||    
T  10953472 tattccgttaatgggtcatccggacatccactcat 10953506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 158; E-Value: 4e-84
Query Start/End: Original strand, 21 - 245
Target Start/End: Original strand, 6257369 - 6257605
Alignment:
Q  21 ccctctcatcaacaacgataaccatagagaggagatgatctgaaacgcacaatagagttagcggcggctgatttggttcttcctcaaccggtacctttat 120  Q
    |||||||||||||||||||||||| || |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6257369 ccctctcatcaacaacgataaccaaagtgaggagatgatctgaaacacacaatagagttagcggcggctgatttggttcttcctcaaccggtacctttat 6257468  T
Q  121 gccttaagttctcttcagatggggagaagagagagt-ttgccgtgtacggtgtattggggac----------tttatattggatggccatta-ggttccc 208  Q
    |||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||          ||||||||||||| |||||| |||| ||    
T  6257469 gcctcaagttctcttcagatggggagaagagagagtattgccgtgtacggtgtattggggaccatagcctcttttatattggatgaccattagggtttcc 6257568  T
Q  209 attattccgttaatgggccatccggacatccactcat 245  Q
    |||||||||||||||||||||||||| ||||||||||    
T  6257569 attattccgttaatgggccatccggatatccactcat 6257605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 156; E-Value: 6e-83
Query Start/End: Original strand, 21 - 260
Target Start/End: Complemental strand, 48167174 - 48166924
Alignment:
Q  21 ccctctcatcaacaacgataaccatagagaggagatgatctgaaacgcacaatagagttagcggcggctgatttggttcttcctcaaccggtacctttat 120  Q
    |||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||| || ||||||||||||||||||| ||||||||||    
T  48167174 ccctctcatcaacaacgataaccaaagagaggagatgatctgaaacacacaatagagttagcggcgactaatttggttcttcctcaaccagtacctttat 48167075  T
Q  121 gccttaagttctcttcagatggggagaagagagagt-ttgccgtgtacggtgtattggggac----------tttatattggatggccattagg--ttcc 207  Q
    |||| ||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||          ||||||||||||||||||||||  ||||    
T  48167074 gcctcaagttctcttcagatggggagaagagagagtattgccgtgtacggtatattggggaccatagcctcttttatattggatggccattagggtttcc 48166975  T
Q  208 cattattccgttaatgggccatccggacatccactcatgttgagtccatatca 260  Q
    ||||||||||||||||||||||||| |||||||||||  ||||||||||||||    
T  48166974 cattattccgttaatgggccatccgaacatccactca--ttgagtccatatca 48166924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 21 - 260
Target Start/End: Complemental strand, 48160955 - 48160705
Alignment:
Q  21 ccctctcatcaacaacgataaccatagagaggagatgatctgaaacgcacaatagagttagcggcggctgatttggttcttcctcaaccggtacctttat 120  Q
    |||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||| || ||||||||||||||||||| ||||||||||    
T  48160955 ccctctcatcaacaacgataaccaaagagaggagatgatctgaaacacacaatagagttagcggcgactaatttggttcttcctcaaccagtacctttat 48160856  T
Q  121 gccttaagttctcttcagatggggagaagagagagt-ttgccgtgtacggtgtattggggac----------tttatattggatggccattagg--ttcc 207  Q
    |||| ||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||          |||||||| |||||||||||||  ||||    
T  48160855 gcctcaagttctcttcagatggggagaagagagagtattgccgtgtacggtatattggggaccatagcctcttttatatttgatggccattagggtttcc 48160756  T
Q  208 cattattccgttaatgggccatccggacatccactcatgttgagtccatatca 260  Q
    ||||||||||||||||||||||||| |||||||||||  ||||||||||||||    
T  48160755 cattattccgttaatgggccatccgaacatccactca--ttgagtccatatca 48160705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 21 - 240
Target Start/End: Original strand, 33458431 - 33458662
Alignment:
Q  21 ccctctcatcaacaacgataaccatagagaggagatgatctgaaacgcacaatagagttagcggcggctgatttggttcttcctcaaccggtacctttat 120  Q
    |||||||||||||||||||||||| ||||| ||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||| |||||||||    
T  33458431 ccctctcatcaacaacgataaccaaagagatgagatgatctgaaacacacaatagagttagcggcggctgatttggttctttctcaaccgatacctttat 33458530  T
Q  121 gccttaagttctcttcagatggggagaagagagagtttgccgtgtacggtgtattggggac----------tttatattggatggccattagg--ttccc 208  Q
    |||| ||||||||||||||||||||||||||| |||||| |||||||||| ||||||||||          ||||||||||||| || |||||  ||| |    
T  33458531 gcctcaagttctcttcagatggggagaagagaaagtttgtcgtgtacggtatattggggaccatagcctcttttatattggatgaccgttagggtttcgc 33458630  T
Q  209 attattccgttaatgggccatccggacatcca 240  Q
    |||||| |||||||||||||||| ||||||||    
T  33458631 attatttcgttaatgggccatccagacatcca 33458662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 21 - 240
Target Start/End: Original strand, 33461556 - 33461787
Alignment:
Q  21 ccctctcatcaacaacgataaccatagagaggagatgatctgaaacgcacaatagagttagcggcggctgatttggttcttcctcaaccggtacctttat 120  Q
    ||||||||||||||||||||| || ||||| ||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  33461556 ccctctcatcaacaacgataatcaaagagatgagatgatctgaaacacacaatagagttagcggcggctgatttgattcttcctcaaccggtacctttat 33461655  T
Q  121 gccttaagttctcttcagatggggagaagagagagtttgccgtgtacggtgtattggggac----------tttatattggatggccattagg--ttccc 208  Q
    |||| ||||||| ||||||||||||||||||||||||| ||||||||||| ||||||||||          |||||||||||||  ||| |||  |||||    
T  33461656 gcctcaagttcttttcagatggggagaagagagagtttaccgtgtacggtatattggggaccatagcctcttttatattggatgatcatcagggtttccc 33461755  T
Q  209 attattccgttaatgggccatccggacatcca 240  Q
    ||||| ||||||||| | ||||||||||||||    
T  33461756 attatcccgttaatgagtcatccggacatcca 33461787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 77 - 260
Target Start/End: Original strand, 26957023 - 26957217
Alignment:
Q  77 gttagcggcggctgatttggttcttcctcaaccggtacctttatgccttaagttctcttcagatggggagaagagagagt-ttgccgtgtacggtgtatt 175  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||| ||||    
T  26957023 gttagcggcgactgatttggttcttcctcaaccggtacctttatgcctcaagttctcttcagatggggagaagagagagtattgccgtgtacggtatatt 26957122  T
Q  176 ggggac----------tttatattggatggccattagg--ttcccattattccgttaatgggccatccggacatccactcatgttgagtccatatca 260  Q
    ||||||          |||||||| |||||||||||||  |||||||||||||||||||| ||||||||||||||||||||  ||||||||||||||    
T  26957123 ggggaccatagcctcttttatatttgatggccattagggtttcccattattccgttaatgagccatccggacatccactca--ttgagtccatatca 26957217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 18 - 260
Target Start/End: Original strand, 44831773 - 44832028
Alignment:
Q  18 caaccctctcatcaacaacgataaccatagagag-----gagatgatctgaaacgcacaa--tagagttagcggcggctgatttggttcttcctcaaccg 110  Q
    ||||||||||| |||||||||||| || ||||||     | ||||||||||||| |||||  ||| ||||||| |||||||| |||||||||||||||||    
T  44831773 caaccctctcaacaacaacgataaacagagagagagaaggtgatgatctgaaacacacaaaatagggttagcgacggctgatgtggttcttcctcaaccg 44831872  T
Q  111 gtacctttatgccttaagttctcttcagatggggagaagagagagtttgccgtgtacggtgtattggggac----------tttatattggatggccatt 200  Q
    |||  ||||||||| ||||||||||| |||| |||||||||||||||    |||| |||| ||||||||||          ||||||||||||| |||||    
T  44831873 gtatttttatgcctcaagttctcttcggatgcggagaagagagagtt----gtgttcggtatattggggaccatagcctcttttatattggatgaccatt 44831968  T
Q  201 agg--ttcccattattccgttaatgggccatccggacatccactcatgttgagtccatatca 260  Q
    |||  |||| |||||||||||||||| |||||||||||| ||||||  ||||||||||||||    
T  44831969 agggtttccaattattccgttaatggaccatccggacatgcactca--ttgagtccatatca 44832028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 22 - 171
Target Start/End: Complemental strand, 49976585 - 49976432
Alignment:
Q  22 cctctcatcaacaacgataaccatagagaggag---atgatctgaaacgcacaataga---gttagcggcggctgatttggttcttcctcaaccggtacc 115  Q
    ||||||| |||||||||||| || |||||||||   ||||||| |||| ||||| | |   |||||||||||||||||||||||||||||||| |||||     
T  49976585 cctctcaacaacaacgataaacaaagagaggaggtgatgatctcaaacacacaaaataagggttagcggcggctgatttggttcttcctcaac-ggtac- 49976488  T
Q  116 tttatgccttaagttctcttcagatggggagaagagagagtttgccgtgtacggtg 171  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  49976487 tttatgcctcaagttctcttcagatggggagaagagagagtttgccgtgtacggtg 49976432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 21 - 118
Target Start/End: Original strand, 10733410 - 10733507
Alignment:
Q  21 ccctctcatcaacaacgataaccatagagaggagatgatctgaaacgcacaatagagttagcggcggctgatttggttcttcctcaaccggtaccttt 118  Q
    |||||||||||||||||||||||| |||||||||||||| |||||| |||||||||||||||| |||||||||||||||||||||||||| |||||||    
T  10733410 ccctctcatcaacaacgataaccaaagagaggagatgatttgaaacacacaatagagttagcgacggctgatttggttcttcctcaaccgataccttt 10733507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 21 - 118
Target Start/End: Original strand, 10947179 - 10947276
Alignment:
Q  21 ccctctcatcaacaacgataaccatagagaggagatgatctgaaacgcacaatagagttagcggcggctgatttggttcttcctcaaccggtaccttt 118  Q
    |||||||||||||||||||||||| |||||||||||||| |||||| |||||||||||||||| |||||||||||||||||||||||||| |||||||    
T  10947179 ccctctcatcaacaacgataaccaaagagaggagatgatttgaaacacacaatagagttagcgacggctgatttggttcttcctcaaccgataccttt 10947276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 78 - 260
Target Start/End: Complemental strand, 50168532 - 50168341
Alignment:
Q  78 ttagcggcggctgatttggttcttcctcaaccggtacctttatgccttaagttctcttcagatggggagaagagagagtttgccgtgtacggtgtattgg 177  Q
    |||||||||| |||||| ||||||||||||| ||||||||||||||| ||||||||||||||||| ||||| |||||||||  |||||||||||||||||    
T  50168532 ttagcggcggttgatttagttcttcctcaac-ggtacctttatgcctcaagttctcttcagatggagagaaaagagagttttgcgtgtacggtgtattgg 50168434  T
Q  178 ggac----------tttatattggatggccattagg--ttcccattattccgttaatgggccatccggacatccactcatgttgagtccatatca 260  Q
    ||||          ||||||||| ||| ||||||||  || |||||||| |||||||||| ||| ||| ||||||||||  ||||||||||||||    
T  50168433 ggaccatagcctcttttatattgaatgaccattagggttttccattatttcgttaatgggtcattcggtcatccactca--ttgagtccatatca 50168341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 126 - 260
Target Start/End: Original strand, 26971824 - 26971968
Alignment:
Q  126 aagttctcttcagatggggagaagagagagt-ttgccgtgtacggtgtattggggac----------tttatattggatggccattagg-ttcccattat 213  Q
    ||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||          |||||||||||||||||||||| || |||||||    
T  26971824 aagttctcttcagatggggagaagagagagtattgccgtgtacggtatattggggaccatagtctcttttatattggatggccattagggtttccattat 26971923  T
Q  214 tccgttaatgggccatccggacatccactcatgttgagtccatatca 260  Q
    ||||||||||| |||||| ||||||||||||  ||||||||||||||    
T  26971924 tccgttaatggaccatccagacatccactca--ttgagtccatatca 26971968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 78 - 181
Target Start/End: Complemental strand, 50155897 - 50155793
Alignment:
Q  78 ttagcggcggctgatttggttcttcctcaaccggtacctttatgccttaagttctcttcagatggggag-aagagagagtttgccgtgtacggtgtattg 176  Q
    |||||||||||||||||| ||||| ||| || ||||||||||||||||||||||| |||||||| |||| ||||||||||||  ||||||||||||||||    
T  50155897 ttagcggcggctgatttgattctttctcgactggtacctttatgccttaagttcttttcagatgaggagaaagagagagttttgcgtgtacggtgtattg 50155798  T
Q  177 gggac 181  Q
    |||||    
T  50155797 gggac 50155793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 59 - 181
Target Start/End: Complemental strand, 4632339 - 4632216
Alignment:
Q  59 tctgaaacgcacaatagagttagcggcggctgatttggttcttcctcaaccggtacctttatgccttaagttctcttcagatggggagaagagagagt-t 157  Q
    |||||||| || || | ||||||||||  |||||||||||||||||||||||||| |||||||||| |||||||||||||||| | |||||||| ||| |    
T  4632339 tctgaaacacaaaacatagttagcggcttctgatttggttcttcctcaaccggtatctttatgcctcaagttctcttcagatgagaagaagagaaagtat 4632240  T
Q  158 tgccgtgtacggtgtattggggac 181  Q
    || | ||||| || ||||||||||    
T  4632239 tgtcatgtactgtatattggggac 4632216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 46 - 147
Target Start/End: Complemental strand, 35177769 - 35177666
Alignment:
Q  46 agagaggagatgatctgaaacgcacaa--tagagttagcggcggctgatttggttcttcctcaaccggtacctttatgccttaagttctcttcagatggg 143  Q
    ||||||| ||||||||||||| |||||  |||||||||||||| |||||||| || || |||||||| ||| ||||||||| |||||||||||||||| |    
T  35177769 agagaggtgatgatctgaaacacacaacatagagttagcggcgcctgatttgattatttctcaaccgatacatttatgcctcaagttctcttcagatgag 35177670  T
Q  144 gaga 147  Q
    ||||    
T  35177669 gaga 35177666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 77 - 152
Target Start/End: Complemental strand, 3769509 - 3769434
Alignment:
Q  77 gttagcggcggctgatttggttcttcctcaaccggtacctttatgccttaagttctcttcagatggggagaagaga 152  Q
    ||||| ||||||||||||||||||||||||||| |||  |||||||||  |||||| ||||||| |||||||||||    
T  3769509 gttagtggcggctgatttggttcttcctcaacccgtatatttatgcctatagttcttttcagatagggagaagaga 3769434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 87 - 161
Target Start/End: Original strand, 19686551 - 19686625
Alignment:
Q  87 gctgatttggttcttcctcaaccggtacctttatgccttaagttctcttcagatggggagaagagagagtttgcc 161  Q
    ||||||||||||| | ||||||||||||| |||||||| || |||||||  |||| |||||||||||||||||||    
T  19686551 gctgatttggttcgttctcaaccggtaccattatgcctcaatttctcttgggatgaggagaagagagagtttgcc 19686625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 76 - 154
Target Start/End: Complemental strand, 32284620 - 32284542
Alignment:
Q  76 agttagcggcggctgatttggttcttcctcaaccggtacctttatgccttaagttctcttcagatggggagaagagaga 154  Q
    |||||| |||| |||||||||||||||||| | ||||||||||| |||| ||||| |||||||||| |||||| |||||    
T  32284620 agttagtggcgactgatttggttcttcctcgatcggtacctttaggcctcaagttttcttcagatgaggagaatagaga 32284542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 79 - 152
Target Start/End: Original strand, 17627002 - 17627075
Alignment:
Q  79 tagcggcggctgatttggttcttcctcaaccggtacctttatgccttaagttctcttcagatggggagaagaga 152  Q
    ||||| |||||  ||| ||||||||||||||||||| ||||||| |  ||||||||||||||||||||||||||    
T  17627002 tagcgacggctagttttgttcttcctcaaccggtacttttatgcttctagttctcttcagatggggagaagaga 17627075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 76 - 176
Target Start/End: Complemental strand, 33045185 - 33045085
Alignment:
Q  76 agttagcggcggctgatttggttcttcctcaaccggtacctttatgccttaagttctcttcagatggggagaagagagagtttgccgtgtacggtgtatt 175  Q
    ||||| ||||||||||||| |||||| |||||||||||| |||||  || ||||||||||||   | |||||||||||| || | |||| ||||||||||    
T  33045185 agttaacggcggctgatttagttctttctcaaccggtacttttatatctcaagttctcttcaatcgcggagaagagagaattcgtcgtgaacggtgtatt 33045086  T
Q  176 g 176  Q
    |    
T  33045085 g 33045085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 182 - 256
Target Start/End: Complemental strand, 35177620 - 35177544
Alignment:
Q  182 tttatattggatggccattagg--ttcccattattccgttaatgggccatccggacatccactcatgttgagtccat 256  Q
    ||||||||||||| ||||||||  ||| ||||||||| ||||| || ||||| ||||| ||||| | ||||||||||    
T  35177620 tttatattggatgaccattagggtttctcattattcctttaataggtcatccagacatacactcgtattgagtccat 35177544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 208 - 260
Target Start/End: Complemental strand, 28704328 - 28704276
Alignment:
Q  208 cattattccgttaatgggccatccggacatccactcatgttgagtccatatca 260  Q
    |||||||| ||||||| | ||||| ||||||||||||| |||||| |||||||    
T  28704328 cattattcagttaatgagtcatccagacatccactcatattgagttcatatca 28704276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 179; Significance: 1e-96; HSPs: 21)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 21 - 260
Target Start/End: Complemental strand, 13456095 - 13455843
Alignment:
Q  21 ccctctcatcaacaacgataaccatagagaggagatgatctgaaacgcacaatagagttagcggcggctgatttggttcttcctcaaccggtacctttat 120  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  13456095 ccctctcatcaacaactataaccaaagagaggagatgatctgaaacacacaatagagttagcggtggctgatttggttcttcctcaaccggtacctttat 13455996  T
Q  121 gccttaagttctcttcagatggggagaagagagagt-ttgccgtgtacggtgtattggggac----------tttatattggatggccattagg--ttcc 207  Q
    |||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||          ||||||||||||||||||||||  ||||    
T  13455995 gcctcaagttctcttcagatggggagaagagagagtattgccgtgtacggtgtattggggaccatagcctcttttatattggatggccattagggtttcc 13455896  T
Q  208 cattattccgttaatgggccatccggacatccactcatgttgagtccatatca 260  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13455895 cattattccgttaatgggccatccggacatccactcatgttgagtccatatca 13455843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 21 - 260
Target Start/End: Complemental strand, 13462036 - 13461784
Alignment:
Q  21 ccctctcatcaacaacgataaccatagagaggagatgatctgaaacgcacaatagagttagcggcggctgatttggttcttcctcaaccggtacctttat 120  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  13462036 ccctctcatcaacaactataaccaaagagaggagatgatctgaaacacacaatagagttagcggtggctgatttggttcttcctcaaccggtacctttat 13461937  T
Q  121 gccttaagttctcttcagatggggagaagagagagt-ttgccgtgtacggtgtattggggac----------tttatattggatggccattagg--ttcc 207  Q
    |||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||          ||||||||||||||||||||||  ||||    
T  13461936 gcctcaagttctcttcagatggggagaagagagagtattgccgtgtacggtgtattggggaccatagcctcttttatattggatggccattagggtttcc 13461837  T
Q  208 cattattccgttaatgggccatccggacatccactcatgttgagtccatatca 260  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13461836 cattattccgttaatgggccatccggacatccactcatgttgagtccatatca 13461784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 171; E-Value: 6e-92
Query Start/End: Original strand, 21 - 260
Target Start/End: Complemental strand, 36750410 - 36750158
Alignment:
Q  21 ccctctcatcaacaacgataaccatagagaggagatgatctgaaacgcacaatagagttagcggcggctgatttggttcttcctcaaccggtacctttat 120  Q
    |||||| ||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  36750410 ccctctaatcaacaacgataaccaaagagaggagatgatctgaaacacacaatagagttagcggcggctgatttggttcttcctcaaccggtatctttat 36750311  T
Q  121 gccttaagttctcttcagatggggagaagagagagt-ttgccgtgtacggtgtattggggac----------tttatattggatggccattagg--ttcc 207  Q
    |||| ||||||||||||||||||||||||||||||| ||| ||||||||||||||||| |||          ||||||||||||||||||||||  ||||    
T  36750310 gcctcaagttctcttcagatggggagaagagagagtattgtcgtgtacggtgtattggagaccatagcctcttttatattggatggccattagggtttcc 36750211  T
Q  208 cattattccgttaatgggccatccggacatccactcatgttgagtccatatca 260  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36750210 cattattccgttaatgggccatccggacatccactcatgttgagtccatatca 36750158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 162; E-Value: 1e-86
Query Start/End: Original strand, 18 - 260
Target Start/End: Original strand, 28683106 - 28683358
Alignment:
Q  18 caaccctctcatcaacaacgataaccatagagaggagatgatctgaaacgcacaatagagttagcggcggctgatttggttcttcctcaaccggtacctt 117  Q
    |||||||||||||||||||||||||||  |||||  ||||||||||||| ||||||||||||| | ||||||||||||||||||||||||||||||||||    
T  28683106 caaccctctcatcaacaacgataaccaaggagagtggatgatctgaaacacacaatagagttaacagcggctgatttggttcttcctcaaccggtacctt 28683205  T
Q  118 tatgccttaagttctcttcagatggggagaagagagagtttgccgtgtacggtgtattggggac----------tttatattggatggccattagg--tt 205  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||          ||||||||||||||||||||||  ||    
T  28683206 tatgcctcaagttctcttcagatggggagaagagagagtttgccgtgtacggtatattggggaccatagcctcttttatattggatggccattagggttt 28683305  T
Q  206 cccattattccgttaatgggccatccggacatccactcatgttgagtccatatca 260  Q
    |||||||||||||||||||||||||||||||||||||||  ||||||||||||||    
T  28683306 cccattattccgttaatgggccatccggacatccactca--ttgagtccatatca 28683358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 158; E-Value: 4e-84
Query Start/End: Original strand, 23 - 245
Target Start/End: Original strand, 44716971 - 44717206
Alignment:
Q  23 ctctcatcaacaacgataaccatagagaggagatgatctgaaacgcacaatagagttagcggcggctgatttggttcttcctcaaccggtacctttatgc 122  Q
    |||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44716971 ctctcatcaacaacgataaccaaagagaggagatgatctgaaacacacaatagagttagcggcggctgatttggttcttcctcaaccggtacctttatgc 44717070  T
Q  123 cttaagttctcttcagatggggagaagagagagt-ttgccgtgtacggtgtattggggac----------tttatattggatggccattagg--ttccca 209  Q
    || ||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||          |||||||||||||| |||||||  || |||    
T  44717071 ctcaagttctcttcagatggggagaagagatagtattgccgtgtacggtgtattggggaccatagcctcttttatattggatggtcattagggttttcca 44717170  T
Q  210 ttattccgttaatgggccatccggacatccactcat 245  Q
    ||||||||||||||||||||||||||||||||||||    
T  44717171 ttattccgttaatgggccatccggacatccactcat 44717206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 21 - 245
Target Start/End: Complemental strand, 30965323 - 30965086
Alignment:
Q  21 ccctctcatcaacaacgataaccatagagaggagatgatctgaaacgcacaatagagttagcggcggctgatttggttcttcctcaaccggtacctttat 120  Q
    |||||||||||||||||||||||| ||||| ||||||||||||||| ||||||||||||||||||| || ||||||||||||||||||||||||||||||    
T  30965323 ccctctcatcaacaacgataaccaaagagatgagatgatctgaaacacacaatagagttagcggcgactaatttggttcttcctcaaccggtacctttat 30965224  T
Q  121 gccttaagttctcttcagatggggagaagagagagt-ttgccgtgtacggtgtattggggac----------tttatattggatggccattagg--ttcc 207  Q
    |||| ||||||||||||||||||||||||||||||| ||| |||||||||| ||||||||||          |||||||| |||||||||||||  ||||    
T  30965223 gcctcaagttctcttcagatggggagaagagagagtattgtcgtgtacggtatattggggaccatagcctcttttatattagatggccattaggatttcc 30965124  T
Q  208 cattattccgttaatgggccatccggacatccactcat 245  Q
    ||||||||||||||||||||||||||||||||||||||    
T  30965123 cattattccgttaatgggccatccggacatccactcat 30965086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 144; E-Value: 8e-76
Query Start/End: Original strand, 21 - 260
Target Start/End: Complemental strand, 31002372 - 31002122
Alignment:
Q  21 ccctctcatcaacaacgataaccatagagaggagatgatctgaaacgcacaatagagttagcggcggctgatttggttcttcctcaaccggtacctttat 120  Q
    |||||||||||||||||||||||| | ||||||||||||||||||| ||||||||||||||||||| || ||||||||||||||||||||||||||||||    
T  31002372 ccctctcatcaacaacgataaccaaaaagaggagatgatctgaaacacacaatagagttagcggcgactaatttggttcttcctcaaccggtacctttat 31002273  T
Q  121 gccttaagttctcttcagatggggagaagagagagt-ttgccgtgtacggtgtattggggac----------tttatattggatggccatta--ggttcc 207  Q
    |||| ||||||||||||||||||||||||||||||| |||  ||||||||| ||||||||||          ||||||||||||||||||||  | ||||    
T  31002272 gcctcaagttctcttcagatggggagaagagagagtattgttgtgtacggtatattggggaccatagcctcttttatattggatggccattatggtttcc 31002173  T
Q  208 cattattccgttaatgggccatccggacatccactcatgttgagtccatatca 260  Q
    |||||||||||||||||| ||||||||||||||||||  ||||||||||||||    
T  31002172 cattattccgttaatgggtcatccggacatccactca--ttgagtccatatca 31002122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 21 - 260
Target Start/End: Complemental strand, 31008350 - 31008100
Alignment:
Q  21 ccctctcatcaacaacgataaccatagagaggagatgatctgaaacgcacaatagagttagcggcggctgatttggttcttcctcaaccggtacctttat 120  Q
    |||||||||||||||||||||||| | ||||||||||||||||||| ||||||||||||||||||| || |||||||||||||||||||||||| |||||    
T  31008350 ccctctcatcaacaacgataaccaaaaagaggagatgatctgaaacacacaatagagttagcggcgactaatttggttcttcctcaaccggtacttttat 31008251  T
Q  121 gccttaagttctcttcagatggggagaagagagagt-ttgccgtgtacggtgtattggggac----------tttatattggatggccatta--ggttcc 207  Q
    |||| ||||||||||||||||||||||||||||||| |||  ||||||||| ||||||||||          ||||||||||||||||||||  | ||||    
T  31008250 gcctcaagttctcttcagatggggagaagagagagtattgttgtgtacggtatattggggaccatagcctcttttatattggatggccattatggtttcc 31008151  T
Q  208 cattattccgttaatgggccatccggacatccactcatgttgagtccatatca 260  Q
    |||||||||||||||||| ||| ||||||||||||||  ||||||||||||||    
T  31008150 cattattccgttaatgggtcattcggacatccactca--ttgagtccatatca 31008100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 21 - 260
Target Start/End: Original strand, 13149848 - 13150103
Alignment:
Q  21 ccctctcatcaacaacgataaccatagagaggagatgatctgaaacgcacaatagagttagcggcggctgatttggttcttcctcaaccggtacctttat 120  Q
    |||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13149848 ccctctcatcaacaacgataaccaaagagaggagatgatctgaaacacacaatagagttagcggcggctgatttggttcttcctcaaccggtacctttat 13149947  T
Q  121 gccttaagttctcttcagatggg-----gagaagagagagt-ttgccgtgtacggtgtattggggac----------tttatattggatggccattagg- 203  Q
    |||| |||||||||||||||| |     ||||||||||| | |||||||||||||| ||||||||||          |||||||| |||| ||||||||     
T  13149948 gcctcaagttctcttcagatgagatgaggagaagagagaatattgccgtgtacggtatattggggaccataacctcttttatattagatgaccattaggg 13150047  T
Q  204 -ttcccattattccgttaatgggccatccggacatccactcatgttgagtccatatca 260  Q
     |||||||||||||||||||||| |||||| |||||||||||  ||||||||||||||    
T  13150048 tttcccattattccgttaatgggtcatccgtacatccactca--ttgagtccatatca 13150103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 71 - 260
Target Start/End: Original strand, 35084893 - 35085095
Alignment:
Q  71 aatagagttagcggcggctgatttggttcttcctcaaccggtacctttatgccttaagttctcttcagatggggagaagagagagt-ttgccgtgtacgg 169  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||    
T  35084893 aatagggttagcggcggctgatttggttcttcctcaaccggtacctttatgcctcaagttctcttcagatggggagaagagagagtattgccgtgtacgg 35084992  T
Q  170 tgtattggggac----------tttatattggatggccattagg--ttcccattattccgttaatgggccatccggacatccactcatgttgagtccata 257  Q
    | ||||||||||          |||||||||||| |||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35084993 tatattggggaccatagcctcttttatattggatagccattagggtttcccattattccgttaatgggccatccggacatccactcatgttgagtccata 35085092  T
Q  258 tca 260  Q
    |||    
T  35085093 tca 35085095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 71 - 260
Target Start/End: Original strand, 35090866 - 35091068
Alignment:
Q  71 aatagagttagcggcggctgatttggttcttcctcaaccggtacctttatgccttaagttctcttcagatggggagaagagagagt-ttgccgtgtacgg 169  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||    
T  35090866 aatagggttagcggcggctgatttggttcttcctcaaccggtacctttatgcctcaagttctcttcagatggggagaagagagagtattgccgtgtacgg 35090965  T
Q  170 tgtattggggac----------tttatattggatggccattagg--ttcccattattccgttaatgggccatccggacatccactcatgttgagtccata 257  Q
    | ||||||||||          |||||||||||| |||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  35090966 tatattggggaccatagcctcttttatattggatagccattagggtttcccattattccgttaatgggccatccggacatccactcatgttgagtctata 35091065  T
Q  258 tca 260  Q
    |||    
T  35091066 tca 35091068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 77 - 259
Target Start/End: Complemental strand, 23343493 - 23343300
Alignment:
Q  77 gttagcggcggctgatttggttcttcctcaaccggtacctttatgccttaagttctcttcagatggggagaagagagagtttgccgtgtacggtgtattg 176  Q
    |||||| ||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  23343493 gttagcagcggctgatttggttcttcctcaaccgatacctttatgcctcaagttctcttcagatggggagaagagagagtttcccgtgtacggtgtattg 23343394  T
Q  177 gggac----------tttatattggatggccatta-ggttcccattattccgttaatgggccatccggacatccactcatgttgagtccatatc 259  Q
    |||||          |||||||||||||| ||||| |||| ||||||||| ||||||||| |||||||||||||||  || |||||||||||||    
T  23343393 gggaccatagcctcttttatattggatggtcattagggtttccattattctgttaatgggtcatccggacatccacctatattgagtccatatc 23343300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 77 - 166
Target Start/End: Original strand, 35438925 - 35439014
Alignment:
Q  77 gttagcggcggctgatttggttcttcctcaaccggtacctttatgccttaagttctcttcagatggggagaagagagagtttgccgtgta 166  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  35438925 gttagcggcggctgatttggttcttcctcaaccggtacctttatgcctcaagttctcttcagatggggagaagagagagtttgccgtgta 35439014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 82 - 260
Target Start/End: Original strand, 11048776 - 11048968
Alignment:
Q  82 cggcggctgatttggttcttcctcaaccggtacctttatgccttaagttctcttcagatggggagaagagaga----gtttgccgtgtacggtgtattgg 177  Q
    ||||| || |||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||    |||||||||||||| ||||||||    
T  11048776 cggcgactaatttggttcttcctcaactggtacctttatgcctcaagttctcttcagatggggagaagagagagttggtttgccgtgtacgatgtattgg 11048875  T
Q  178 ggac----------tttatattggatggccattagg--ttcccattattccgttaatgggccatccggacatccactcatgttgagtccatatca 260  Q
    ||||          |||||||||||| |||||||||  |||||||||||||||||||||| ||||| ||||||||| ||  ||||||||||||||    
T  11048876 ggaccatagcctcttttatattggatcgccattagggtttcccattattccgttaatgggtcatccagacatccaccca--ttgagtccatatca 11048968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 79 - 245
Target Start/End: Complemental strand, 19879536 - 19879353
Alignment:
Q  79 tagcggcggctgatttggttcttcctcaaccggtacctttatgccttaagttctcttcagatggggagaagagagag-tttgccgtgtacggtgtattgg 177  Q
    ||||||||||||||||| |||||| |||| |||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||| ||||||||    
T  19879536 tagcggcggctgatttgattcttcttcaatcggtacctttatgcctcaagttctcttcagatggggagaagagagagttttgccgtgtacgatgtattgg 19879437  T
Q  178 ggac---------------tttatattggatggccatt-aggttcccattattccgttaatgggccatccggacatccactcat 245  Q
     |||                |||||||||||||||||| || |||||||||||||||||||||| |||| |||||| |||||||    
T  19879436 cgaccataacctcttttatgttatattggatggccattaagtttcccattattccgttaatgggtcatctggacattcactcat 19879353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 182 - 245
Target Start/End: Original strand, 35439706 - 35439771
Alignment:
Q  182 tttatattggatggccattagg--ttcccattattccgttaatgggccatccggacatccactcat 245  Q
    ||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||    
T  35439706 tttatattggatggccattagggtttcccattattccgttaatgggccatccggacatccactcat 35439771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 78 - 140
Target Start/End: Complemental strand, 29034759 - 29034697
Alignment:
Q  78 ttagcggcggctgatttggttcttcctcaaccggtacctttatgccttaagttctcttcagat 140  Q
    ||||||| |||||||||| |||||||||||| |||||||||||| || |||||||||||||||    
T  29034759 ttagcggtggctgatttgattcttcctcaactggtacctttatgtctcaagttctcttcagat 29034697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 182 - 245
Target Start/End: Original strand, 7771522 - 7771586
Alignment:
Q  182 tttatattggatggccattaggtt-cccattattccgttaatgggccatccggacatccactcat 245  Q
    ||||||||||||| | |||||||| |||||||||| ||||||||| ||||||||| |||||||||    
T  7771522 tttatattggatgacgattaggtttcccattattctgttaatgggtcatccggacgtccactcat 7771586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 207 - 245
Target Start/End: Original strand, 35442195 - 35442233
Alignment:
Q  207 ccattattccgttaatgggccatccggacatccactcat 245  Q
    ||||||||||||||||||| |||||||||||||||||||    
T  35442195 ccattattccgttaatgggtcatccggacatccactcat 35442233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 182 - 259
Target Start/End: Complemental strand, 23284769 - 23284690
Alignment:
Q  182 tttatattggatggccattagg--ttcccattattccgttaatgggccatccggacatccactcatgttgagtccatatc 259  Q
    |||||||| ||||||||||||   ||| |||||||||||||||||| |||| | |||||||| ||| ||||||| |||||    
T  23284769 tttatatttgatggccattagagtttcacattattccgttaatgggtcatcagaacatccacccatattgagtcaatatc 23284690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 77 - 139
Target Start/End: Complemental strand, 29833142 - 29833079
Alignment:
Q  77 gttagcggcggctga-tttggttcttcctcaaccggtacctttatgccttaagttctcttcaga 139  Q
    ||||||||||||| | ||||||||||||||||||| ||| ||||| | | ||||||||||||||    
T  29833142 gttagcggcggctaaatttggttcttcctcaaccgatacatttatccttcaagttctcttcaga 29833079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 178; Significance: 4e-96; HSPs: 19)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 178; E-Value: 4e-96
Query Start/End: Original strand, 18 - 260
Target Start/End: Complemental strand, 32890887 - 32890632
Alignment:
Q  18 caaccctctcatcaacaacgataaccatagagaggagatgatctgaaacgcacaatagagttagcggcggctgatttggttcttcctcaaccggtacctt 117  Q
    ||||||||||||||||||| ||||||| ||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32890887 caaccctctcatcaacaacaataaccaaagagatgagatgatctgaaacacacaatagagttagcggcggctgatttggttcttcctcaaccggtacctt 32890788  T
Q  118 tatgccttaagttctcttcagatggggagaagagagagt-ttgccgtgtacggtgtattggggac----------tttatattggatggccattagg--t 204  Q
    ||||||| ||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||          ||||||||||||||||||||||  |    
T  32890787 tatgcctcaagttctcttcagatggggagaagagagagtattgccgtgtacggtatattggggaccatagcctcttttatattggatggccattagggtt 32890688  T
Q  205 tcccattattccgttaatgggccatccggacatccactcatgttgagtccatatca 260  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32890687 tcccattattccgttaatgggccatccggacatccactcatgttgagtccatatca 32890632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 178; E-Value: 4e-96
Query Start/End: Original strand, 18 - 260
Target Start/End: Complemental strand, 32897011 - 32896756
Alignment:
Q  18 caaccctctcatcaacaacgataaccatagagaggagatgatctgaaacgcacaatagagttagcggcggctgatttggttcttcctcaaccggtacctt 117  Q
    ||||||||||||||||||| ||||||| ||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32897011 caaccctctcatcaacaacaataaccaaagagatgagatgatctgaaacacacaatagagttagcggcggctgatttggttcttcctcaaccggtacctt 32896912  T
Q  118 tatgccttaagttctcttcagatggggagaagagagagt-ttgccgtgtacggtgtattggggac----------tttatattggatggccattagg--t 204  Q
    ||||||| ||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||          ||||||||||||||||||||||  |    
T  32896911 tatgcctcaagttctcttcagatggggagaagagagagtattgccgtgtacggtatattggggaccatagcctcttttatattggatggccattagggtt 32896812  T
Q  205 tcccattattccgttaatgggccatccggacatccactcatgttgagtccatatca 260  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32896811 tcccattattccgttaatgggccatccggacatccactcatgttgagtccatatca 32896756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 178; E-Value: 4e-96
Query Start/End: Original strand, 21 - 260
Target Start/End: Complemental strand, 36818967 - 36818716
Alignment:
Q  21 ccctctcatcaacaacgataaccatagagaggagatgatctgaaacgcacaatagagttagcggcggctgatttggttcttcctcaaccggtacctttat 120  Q
    |||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36818967 ccctctcatcaacaacgataaccaaagagaggagatgatctgaaacacacaatagagttagcggcggctgatttggttcttcctcaaccggtacctttat 36818868  T
Q  121 gccttaagttctcttcagatggggagaagagagagtttgccgtgtacggtgtattggggac----------tttatattggatggccattagg--ttccc 208  Q
    |||| |||||||| |||||||||||||||||||||||||||||||||||| ||||||||||          |||||||| ||| |||||||||  |||||    
T  36818867 gcctcaagttctcatcagatggggagaagagagagtttgccgtgtacggtatattggggaccatagcctcttttatatttgatagccattagggtttccc 36818768  T
Q  209 attattccgttaatgggccatccggacatccactcatgttgagtccatatca 260  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36818767 attattccgttaatgggccatccggacatccactcatgttgagtccatatca 36818716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 168; E-Value: 4e-90
Query Start/End: Original strand, 21 - 260
Target Start/End: Original strand, 5542324 - 5542574
Alignment:
Q  21 ccctctcatcaacaacgataaccatagagaggagatgatctgaaacgcacaatagagttagcggcggctgatttggttcttcctcaaccggtacctttat 120  Q
    |||||||||||||||||||||||| |||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5542324 ccctctcatcaacaacgataaccaaagaggggagatgatctgaaacacacaatagagttagcggcggctgatttggttcttcctcaaccggtacctttat 5542423  T
Q  121 gccttaagttctcttcagatggggagaagagagagt-ttgccgtgtacggtgtattggggac----------tttatattggatggccattagg--ttcc 207  Q
    |||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||          ||||||||||||||||||||||  ||||    
T  5542424 gcctcaagttctcttcagatggggagaagagagagtattgccgtgtacggtgtattggggaccatagcctcttttatattggatggccattagggtttcc 5542523  T
Q  208 cattattccgttaatgggccatccggacatccactcatgttgagtccatatca 260  Q
    |||||||||||||||||| ||||||||||||||||||  ||||||||||||||    
T  5542524 cattattccgttaatgggtcatccggacatccactca--ttgagtccatatca 5542574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 154; E-Value: 9e-82
Query Start/End: Original strand, 20 - 260
Target Start/End: Original strand, 42993166 - 42993415
Alignment:
Q  20 accctctcatcaacaacgataaccatagagaggagatgatctgaaacgcacaatagagttagcggcggctgatttggttcttcctcaaccggtaccttta 119  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42993166 accctctcatcaacaacgataaccaaagagaggagatgatctgaaacacacaatagagttagcggcggctgatttggttcttcctcaaccggtaccttta 42993265  T
Q  120 tgccttaagttctcttcagatggggagaagagagagt-ttgccgtgtacggtgtattggggac----------tttatattggatggccattagg--ttc 206  Q
    ||||| |||||||||||||||||||||||   ||||| ||||||||| |||| ||||||||||          ||||||||||||||| ||||||  |||    
T  42993266 tgcctcaagttctcttcagatggggagaa---agagtattgccgtgttcggtatattggggaccataacctcttttatattggatggcgattagggtttc 42993362  T
Q  207 ccattattccgttaatgggccatccggacatccactcatgttgagtccatatca 260  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  42993363 ccattattccgttaatgggccat-cggacatccactcatgttgagtccatatca 42993415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 21 - 260
Target Start/End: Complemental strand, 10705833 - 10705584
Alignment:
Q  21 ccctctcatcaacaacgataaccatagagaggagatgatctgaaacgcacaatagagttagcggcggctgatttggttcttcctcaaccggtacctttat 120  Q
    |||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  10705833 ccctctcatcaacaacgataaccaaagagaggagatgatctgaaacacacaatagagttagcggcggctgatttgattcttcctcaaccggtacctttat 10705734  T
Q  121 gccttaagttctcttcagatggggagaagagagagt-ttgccgtgtacggtgtattggggac----------tttatattggatggccatta-ggttccc 208  Q
    | |||||||||||||||||||||||||||||||||| ||| |||||||||| |||||| |||          |||||||| |||| | |||| |||| ||    
T  10705733 ggcttaagttctcttcagatggggagaagagagagtattgtcgtgtacggtatattggagaccatagcctcttttatatttgatgactattagggtttcc 10705634  T
Q  209 attattccgttaatgggccatccggacatccactcatgttgagtccatatca 260  Q
    ||||||||||||||||||||||||||||||||||||  ||||||||||||||    
T  10705633 attattccgttaatgggccatccggacatccactca--ttgagtccatatca 10705584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 21 - 260
Target Start/End: Complemental strand, 9935274 - 9935027
Alignment:
Q  21 ccctctcatcaacaacgataaccatagagaggagatgatctgaaacgcacaatagagttagcggcggctgatttggttcttcctcaaccggtacctttat 120  Q
    |||||| |||||||||| |||||| ||| ||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||| ||||||||||||    
T  9935274 ccctctaatcaacaacgttaaccaaagataggagatgatctgaaacacacaatagatttagcggcggctgatttggttcttcctcaatcggtacctttat 9935175  T
Q  121 gccttaagttctcttcagatggggagaagagagagtttgccgtgtacggtgtattggggac----------tttatattggatggccattagg-ttccca 209  Q
    |||| ||||||||||||||||||||||||  |||||||| |||||||||||||||||||||          ||||| |||||||||||||||| ||||||    
T  9935174 gcctcaagttctcttcagatggggagaag--agagtttgtcgtgtacggtgtattggggaccatagcctcttttat-ttggatggccattaggtttccca 9935078  T
Q  210 ttattccgttaatgggccatccggacatccactcatgttgagtccatatca 260  Q
    |||||||||||||||| |||||||| |||||||||||||||||||||||||    
T  9935077 ttattccgttaatgggtcatccggatatccactcatgttgagtccatatca 9935027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 21 - 260
Target Start/End: Complemental strand, 10700025 - 10699775
Alignment:
Q  21 ccctctcatcaacaacgataaccatagagaggagatgatctgaaacgcacaatagagttagcggcggctgatttggttcttcctcaaccggtacctttat 120  Q
    |||||||||||||||||||||||| |||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10700025 ccctctcatcaacaacgataaccaaagagaggaaatgatctgaaacacacaatagagttagcggcggctgatttggttcttcctcaaccggtacctttat 10699926  T
Q  121 gccttaagttctcttcagatggggagaagagagagt-ttgccgtgtacggtgtattggggac----------tttatattggatggccattagg--ttcc 207  Q
    |||| ||||| || |||||||| ||||||||||||| |||||||||||||| ||||||||||          |||||||| |||| ||||||||  ||||    
T  10699925 gcctcaagttttcgtcagatggagagaagagagagtattgccgtgtacggtatattggggaccatagtctcttttatatttgatgaccattagggtttcc 10699826  T
Q  208 cattattccgttaatgggccatccggacatccactcatgttgagtccatatca 260  Q
    ||||| |||||||||||| ||||||||||||||||||  ||||||||||||||    
T  10699825 cattactccgttaatgggtcatccggacatccactca--ttgagtccatatca 10699775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 21 - 181
Target Start/End: Complemental strand, 14417936 - 14417776
Alignment:
Q  21 ccctctcatcaacaacgataaccatagagaggagatgatctgaaacgcacaatagagttagcggcggctgatttggttcttcctcaaccggtacctttat 120  Q
    |||||| |||||| |||||||||| |||||| |||||||||||||| ||||||||  ||||||||||||||||||||||||||||||||||||| |||||    
T  14417936 ccctctaatcaacgacgataaccaaagagagaagatgatctgaaacacacaatagttttagcggcggctgatttggttcttcctcaaccggtacgtttat 14417837  T
Q  121 gccttaagttctcttcagatggggagaagagagagtttgccgtgtacggtgtattggggac 181  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14417836 gcctcaagttctcttcagatggggagaagagagagtttgccgtgtacggtgtattggggac 14417776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 56 - 260
Target Start/End: Original strand, 22219926 - 22220141
Alignment:
Q  56 tgatctgaaacgcacaatagagttagcggcggctgatttggttcttcctcaaccggtacctttatgccttaagttctcttcagatggggagaagagagag 155  Q
    |||||||||||  |||||| |||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  22219926 tgatctgaaacaaacaataaagttagtggcggctgatttggttcttcctcaaccggtacctttatgcctcaagttctcttcagatggggagaagagagag 22220025  T
Q  156 t-ttgccgtgtacggtgtattggggac----------tttatattggatggccattagg--ttcccattattccgttaatgggccatccggacatccact 242  Q
    | |||||||||||||| ||||||||||          ||||||||||||| ||||||||  ||||||||||||||||||||||||||||||||||||| |    
T  22220026 tattgccgtgtacggtatattggggaccatagcctcttttatattggatgaccattagggtttcccattattccgttaatgggccatccggacatccatt 22220125  T
Q  243 catgttgagtccatatca 260  Q
    ||  ||||||||||||||    
T  22220126 ca--ttgagtccatatca 22220141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 77 - 260
Target Start/End: Complemental strand, 42033740 - 42033543
Alignment:
Q  77 gttagcggcggctgatttggttcttcctcaaccggtacctttatgccttaagttctcttcagatggggagaagagagagtttgccgtgtacggtgtattg 176  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||  |||||||    
T  42033740 gttagcggcggctgatttggttcttcctcaaccggtacctttatgcctcaagttctcttcagatggagagaagagagagtttgccgtgtacaatgtattg 42033641  T
Q  177 ggga----------ctttatattggatggccattagg--ttcccattattccgttaat----gggccatccggacatccactcatgttgagtccatatca 260  Q
    ||||          |||||||||||||| ||||||||  |||||||||||||||||||    ||||||||||||||||||||||  ||||||||||||||    
T  42033640 gggaccatagcctcctttatattggatgaccattagggtttcccattattccgttaatgggcgggccatccggacatccactca--ttgagtccatatca 42033543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 77 - 181
Target Start/End: Original strand, 1883039 - 1883143
Alignment:
Q  77 gttagcggcggctgatttggttcttcctcaaccggtacctttatgccttaagttctcttcagatggggagaagagagagtttgccgtgtacggtgtattg 176  Q
    ||||||||||||| ||||||||||||||||||| ||||||||||| || ||||||||||||||||||||||||||| |||||||||||||  ||||||||    
T  1883039 gttagcggcggctaatttggttcttcctcaaccagtacctttatgtctcaagttctcttcagatggggagaagagaaagtttgccgtgtattgtgtattg 1883138  T
Q  177 gggac 181  Q
    |||||    
T  1883139 gggac 1883143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 18 - 260
Target Start/End: Original strand, 39735712 - 39735952
Alignment:
Q  18 caaccctctcatcaacaacgataaccatagagaggagatgatctgaaacgcacaata-gagttagcggcggctgatttggttcttcctcaaccggtacct 116  Q
    ||||||||||| |||||||| |||    |||||| || |||||||||||  |||| | | ||||||||||||||||||| |||||||| ||| ||||| |    
T  39735712 caaccctctcaacaacaacggtaa----agagagaaggtgatctgaaacaaacaacaagggttagcggcggctgatttgattcttccttaactggtacat 39735807  T
Q  117 ttatgccttaagttctcttcagatggggagaagagagag-tttgccgtgtacggtgtattggggac---tttatattggatggccatta-ggttcccatt 211  Q
    |||||||| |||| ||||||||||||||||||||||||| |||| ||||||||  |||   | | |   |||||||| ||||||||||| |||| || ||    
T  39735808 ttatgcctcaagtactcttcagatggggagaagagagagttttgtcgtgtacg--gtaccagagcctcttttatattagatggccattagggtttccctt 39735905  T
Q  212 attccgttaatgggccatccggacatccactcatgttgagtccatatca 260  Q
    |||||||||||||| |||||||||||||||| |  ||||||||||||||    
T  39735906 attccgttaatgggtcatccggacatccactga--ttgagtccatatca 39735952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 77 - 181
Target Start/End: Original strand, 39727528 - 39727633
Alignment:
Q  77 gttagcggcggctgatttggttcttcctcaaccggtacctttatgccttaagttctcttcagatggggagaagagagag-tttgccgtgtacggtgtatt 175  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||| |||| ||||| ||||||||||||||||||| ||||  ||||||||| ||||    
T  39727528 gttagcggctgctgatttggttcttcctcaaccggtacctttatgcctcaagtactcttgagatggggagaagagagagttttgttgtgtacggtatatt 39727627  T
Q  176 ggggac 181  Q
    ||||||    
T  39727628 ggggac 39727633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 162 - 259
Target Start/End: Original strand, 1883158 - 1883257
Alignment:
Q  162 gtgtacggtgtattggggactttatattggatggccattagg--ttcccattattccgttaatgggccatccggacatccactcatgttgagtccatatc 259  Q
    |||||| |||||||||||||  ||   ||||||||||||| |  ||||||||||| |||||||||| ||||||||||||||||||| |||||||||||||    
T  1883158 gtgtacagtgtattggggaccatagcctggatggccattaaggtttcccattatttcgttaatgggtcatccggacatccactcatattgagtccatatc 1883257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 77 - 161
Target Start/End: Complemental strand, 1171285 - 1171215
Alignment:
Q  77 gttagcggcggctgatttggttcttcctcaaccggtacctttatgccttaagttctcttcagatggggagaagagagagtttgcc 161  Q
    ||||||||||||||||||||||||||||||||||||              |||||||||||||||||||||||||||||||||||    
T  1171285 gttagcggcggctgatttggttcttcctcaaccggt--------------agttctcttcagatggggagaagagagagtttgcc 1171215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 204 - 260
Target Start/End: Original strand, 39727644 - 39727698
Alignment:
Q  204 ttcccattattccgttaatgggccatccggacatccactcatgttgagtccatatca 260  Q
    |||||||| |||||||||||||| |||||||||||||||||  ||||||||||||||    
T  39727644 ttcccattgttccgttaatgggctatccggacatccactca--ttgagtccatatca 39727698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 207 - 260
Target Start/End: Complemental strand, 17954305 - 17954252
Alignment:
Q  207 ccattattccgttaatgggccatccggacatccactcatgttgagtccatatca 260  Q
    |||||||||||||| |||| |||| | |||||||||||| ||||||||||||||    
T  17954305 ccattattccgttagtgggtcatctgaacatccactcattttgagtccatatca 17954252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 204 - 245
Target Start/End: Complemental strand, 14417761 - 14417720
Alignment:
Q  204 ttcccattattccgttaatgggccatccggacatccactcat 245  Q
    ||||||||||| |||||||||| |||||| ||||||||||||    
T  14417761 ttcccattatttcgttaatgggacatccgaacatccactcat 14417720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 178; Significance: 4e-96; HSPs: 16)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 178; E-Value: 4e-96
Query Start/End: Original strand, 18 - 260
Target Start/End: Original strand, 4580482 - 4580737
Alignment:
Q  18 caaccctctcatcaacaacgataaccatagagaggagatgatctgaaacgcacaatagagttagcggcggctgatttggttcttcctcaaccggtacctt 117  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||    
T  4580482 caaccctctcatcaacaacgataaccaaagagaggagatgatctgaaacacgcaatagagttagcggcggctgatttggttcttcctcaaccggtacctt 4580581  T
Q  118 tatgccttaagttctcttcagatggggagaagagagagt-ttgccgtgtacggtgtattggggac----------tttatattggatggccattagg--t 204  Q
    ||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||          ||||||||||||||||||||||  |    
T  4580582 tatgcctcaagttctcttcagatggggagaagagagagtattgccgtgtacggtgtattggggaccatagcctcttttatattggatggccattagggtt 4580681  T
Q  205 tcccattattccgttaatgggccatccggacatccactcatgttgagtccatatca 260  Q
    |||||||||||| |||||||| ||||||||||||||||||||||||||||||||||    
T  4580682 tcccattattccattaatgggtcatccggacatccactcatgttgagtccatatca 4580737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 21 - 260
Target Start/End: Complemental strand, 25343620 - 25343369
Alignment:
Q  21 ccctctcatcaacaacgataaccatagagaggagatgatctgaaacgcacaatagagttagcggcggctgatttggttcttcctcaaccggtacctttat 120  Q
    |||| ||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25343620 ccctttcatcaacaacgataaccaaagagaggagatgatctgaaacacacaatagagttagcggcggctgatttggttcttcctcaaccggtacctttat 25343521  T
Q  121 gccttaagttctcttcagatggggagaagagagagt-ttgccgtgtacggtgtattggggac---------tttatattggatggccattagg--ttccc 208  Q
    |||| ||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||         ||||||||||||| ||||||||  |||||    
T  25343520 gcctcaagttctcttcagatggggagaagagagagtattgtcgtgtacggtgtattggggacatagcctcttttatattggatgaccattagggtttccc 25343421  T
Q  209 attattccgttaatgggccatccggacatccactcatgttgagtccatatca 260  Q
    |||||||||||||||| ||||||| |||||||||||||||||||||||||||    
T  25343420 attattccgttaatggaccatccgaacatccactcatgttgagtccatatca 25343369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 21 - 260
Target Start/End: Complemental strand, 25354207 - 25353955
Alignment:
Q  21 ccctctcatcaacaacgataaccatagagaggagatgatctgaaacgcacaatagagttagcggcggctgatttggttcttcctcaaccggtacctttat 120  Q
    |||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25354207 ccctctcatcaacaacgataaccaaagagaggagatgatctgaaacacacaatagagttagcggcggctgatttggttcttcctcaaccggtacctttat 25354108  T
Q  121 gccttaagttctcttcagatggggagaagagagagt-ttgccgtgtacggtgtattggggac----------tttatattggatggccatt--aggttcc 207  Q
    |||| ||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||          |||||||| |||| |||||  || ||||    
T  25354107 gcctcaagttctcttcagatggggagaagagagagtattgtcgtgtacggtgtattggggaccatagcctcttttatattagatgaccattagagtttcc 25354008  T
Q  208 cattattccgttaatgggccatccggacatccactcatgttgagtccatatca 260  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  25354007 cattattccgttaatgggccatccggatatccactcatgttgagtccatatca 25353955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 21 - 245
Target Start/End: Original strand, 8650967 - 8651204
Alignment:
Q  21 ccctctcatcaacaacgataaccatagagaggagatgatctgaaacgcacaatagagttagcggcggctgatttggttcttcctcaaccggtacctttat 120  Q
    |||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8650967 ccctctcatcaacaacgataaccaaagagaggagatgatctgaaacacacaatagagttagcggcggctgatttggttcttcctcaaccggtacctttat 8651066  T
Q  121 gccttaagttctcttcagatggggagaagagagagt-ttgccgtgtacggtgtattggggac----------tttatattggatggccattagg--ttcc 207  Q
    |||| ||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||          ||||||||||||| ||||||||  ||||    
T  8651067 gcctcaagttctcttcagatggggagaagagagagtattgccgtgtacggtatattggggaccatagcctcttttatattggatgaccattagggtttcc 8651166  T
Q  208 cattattccgttaatgggccatccggacatccactcat 245  Q
    ||||||||||||||||||||||||||||||||||||||    
T  8651167 cattattccgttaatgggccatccggacatccactcat 8651204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 21 - 245
Target Start/End: Original strand, 21191030 - 21191270
Alignment:
Q  21 ccctctcatcaacaacgataaccatagagaggagatgatctgaaacgcacaatagagttagcggcggctgatttggttcttcctcaaccggtacctttat 120  Q
    |||||||||||||||||||||||| |||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21191030 ccctctcatcaacaacgataaccaaagagaggagatgatatgaaacacacaatagagttagcggcggctgatttggttcttcctcaaccggtacctttat 21191129  T
Q  121 gcc---ttaagttctcttcagatggggagaagagagagt-ttgccgtgtacggtgtattggggac----------tttatattggatggccatta--ggt 204  Q
    |||   | ||||||||||||||||||||||||||||||| |||||||||| ||| ||||||||||          ||||||||||||||||||||  | |    
T  21191130 gcctcatcaagttctcttcagatggggagaagagagagtattgccgtgtaaggtatattggggaccatagcctcttttatattggatggccattatggtt 21191229  T
Q  205 tcccattattccgttaatgggccatccggacatccactcat 245  Q
    || ||||||||||||||||||||||||| ||||||||||||    
T  21191230 tcacattattccgttaatgggccatccgaacatccactcat 21191270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 49 - 260
Target Start/End: Original strand, 31756410 - 31756632
Alignment:
Q  49 gaggagatgatctgaaacgcacaatagag--ttagcggcggctgatttggttcttcctcaaccggtacctttatgccttaagttctcttcagatggggag 146  Q
    |||| ||||||||||||| ||||||| ||  ||||||||||||||||||||||||||||||| ||||||||||| ||| |||||||||||||||||||||    
T  31756410 gaggtgatgatctgaaacacacaatatagggttagcggcggctgatttggttcttcctcaacaggtacctttatacctcaagttctcttcagatggggag 31756509  T
Q  147 aagagagagtttgccgtgtacggtgtattggggac----------tttatattggatggccattagg--ttcccattattccgttaatgggccatccgga 234  Q
    ||||||||||||| |||||  | | ||||||||||          ||||||||||||||||||||||  ||||||||||||| |||||||| ||||||||    
T  31756510 aagagagagtttgtcgtgtttgatatattggggaccatagcctcttttatattggatggccattagggtttcccattattcc-ttaatgggtcatccgga 31756608  T
Q  235 catccactcatgttgagtccatatca 260  Q
    ||||||||||  ||||||||||||||    
T  31756609 catccactca--ttgagtccatatca 31756632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 77 - 260
Target Start/End: Original strand, 21197250 - 21197454
Alignment:
Q  77 gttagcggcggctgatttggttcttcctcaaccggtacctttatgccttaagttctcttcagatggggagaagagagagt-----------ttgccgtgt 165  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||           |||||||||    
T  21197250 gttagcggcggctgatttggttcttcctcaaccggtatctttatgcctcaagttctcttcagatggggagaagagagagtattgccgagtattgccgtgt 21197349  T
Q  166 acggtgtattggggac----------tttatattggatggccattagg--ttcccattattccgttaatgggccatccggacatccactcatgttgagtc 253  Q
    ||||| ||||||||||          ||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||  |||||||    
T  21197350 acggtatattggggaccatagcctcttttatattggatggccattaggttttcccattattccgttaatgggccatccggacatccactca--ttgagtc 21197447  T
Q  254 catatca 260  Q
    |||||||    
T  21197448 catatca 21197454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 77 - 245
Target Start/End: Original strand, 21770787 - 21770965
Alignment:
Q  77 gttagcggcggctgatttggttcttcctcaaccggtacctttatgccttaagttctcttcagatggggagaagagagag-tttgccgtgtacggtgtatt 175  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||  ||||||||||||| ||||||||||||||||||||    
T  21770787 gttagcagcggctgatttggttcttcctcaaccggtacctttatgcctcaagttctcttcagat--ggagaagagagagttttgccgtgtacggtgtatt 21770884  T
Q  176 ggggac----------tttatattggatggccattagg--ttcccattattccgttaatgggccatccggacatccactcat 245  Q
    ||||||          |||||||||| |||||||||||  ||||||||||||||||||| || |||||||||||||||||||    
T  21770885 ggggaccgtagcctcttttatattggttggccattagggtttcccattattccgttaat-ggtcatccggacatccactcat 21770965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 84 - 245
Target Start/End: Original strand, 21783545 - 21783726
Alignment:
Q  84 gcggctgatttggttcttcctcaaccgg------tacctttatgccttaagttctcttcagatggggagaagagagag-tttgccgtgtacggtgtattg 176  Q
    ||||||||||||||||||||||||||||      ||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  21783545 gcggctgatttggttcttcctcaaccggcacctttacctttatgcctcaagttctcttcagatggggagaagagagagttttgccgtgtacggtgtattg 21783644  T
Q  177 gggac------------tttatattggatggccattagg--ttcccattattccgttaatgggccatccggacatccactcat 245  Q
    |||||            |||||||||||| |||||||||  |||||||||||||||||||||| |||||||||||||||||||    
T  21783645 gggacaccatagcctcttttatattggat-gccattagggtttcccattattccgttaatgggtcatccggacatccactcat 21783726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 84 - 245
Target Start/End: Original strand, 21789768 - 21789949
Alignment:
Q  84 gcggctgatttggttcttcctcaaccgg------tacctttatgccttaagttctcttcagatggggagaagagagag-tttgccgtgtacggtgtattg 176  Q
    ||||||||||||||||||||||||||||      ||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  21789768 gcggctgatttggttcttcctcaaccggcacctttacctttatgcctcaagttctcttcagatggggagaagagagagttttgccgtgtacggtgtattg 21789867  T
Q  177 gggac------------tttatattggatggccattagg--ttcccattattccgttaatgggccatccggacatccactcat 245  Q
    |||||            |||||||||||| |||||||||  |||||||||||||||||||||| |||||||||||||||||||    
T  21789868 gggacaccatagcctcttttatattggat-gccattagggtttcccattattccgttaatgggtcatccggacatccactcat 21789949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 77 - 258
Target Start/End: Complemental strand, 17581572 - 17581384
Alignment:
Q  77 gttagcggcggctgatttggttcttcctcaaccggtacctttatgccttaagttctcttcagatggggagaagagagag-tttgccgtgtacggtgtatt 175  Q
    ||||| ||| ||||||||||||||||||||||  |||| ||||||||| |||||||||||||||||||||||||||||| |||| ||||||| ||   ||    
T  17581572 gttagtggcagctgatttggttcttcctcaacttgtacatttatgcctcaagttctcttcagatggggagaagagagagttttgtcgtgtacagt---tt 17581476  T
Q  176 ggggac----------tttatattggatggccattagg-ttcccattattccgttaatgggccatccggacatccactcatgttgagtccatat 258  Q
    ||||||          ||||||||||| ||  |||||| |||||||||||||||||||||| ||||||||||||||||||  ||||||||||||    
T  17581475 ggggaccatagcctcttttatattggacggttattaggtttcccattattccgttaatgggtcatccggacatccactca--ttgagtccatat 17581384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 80 - 241
Target Start/End: Complemental strand, 28728218 - 28728047
Alignment:
Q  80 agcggcggctgatttggttcttcctcaaccggtacctttatgccttaagttctcttcagatggggagaagagagagtttgccgtgtacggtgtattgggg 179  Q
    ||||||||||  || ||||||||||||||||||||||  ||||| ||| | | ||||||||||||||||||| |  ||||| ||||||||| ||||||||    
T  28728218 agcggcggctagttaggttcttcctcaaccggtacctcgatgccctaa-tgcgcttcagatggggagaagagcggttttgctgtgtacggtatattgggg 28728120  T
Q  180 act---------ttatattggatggccattagg--ttcccattattccgttaatgggccatccggacatccac 241  Q
    ||          |||||| ||||||||||||||  ||||||||||||||||||||| ||||||||||||||||    
T  28728119 accatagcctcattatataggatggccattagggtttcccattattccgttaatggaccatccggacatccac 28728047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 96 - 178
Target Start/End: Original strand, 30905821 - 30905902
Alignment:
Q  96 gttcttcctcaaccggtacctttatgccttaagttctcttcagatggggagaagagagagtttgccgtgtacggtgtattggg 178  Q
    ||||||||||||  ||||  ||||||||| ||||||||||||||||||| |||||||||||||| || |||||||||||||||    
T  30905821 gttcttcctcaattggtatatttatgcctcaagttctcttcagatgggg-gaagagagagtttgtcgagtacggtgtattggg 30905902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 76 - 179
Target Start/End: Complemental strand, 20745497 - 20745394
Alignment:
Q  76 agttagcggcggctgatttggttcttcctcaaccggtacctttatgccttaagttctcttcagatggggagaagagagagtttgccgtgtacggtgtatt 175  Q
    ||||||||| | || |||||||| |||||||| |||||| |||| |||  |||||||||||||||||  | ||| |||| | |||| |||||||||||||    
T  20745497 agttagcggtgactaatttggtttttcctcaatcggtacttttaagccccaagttctcttcagatggaaataagtgagaatatgccatgtacggtgtatt 20745398  T
Q  176 gggg 179  Q
    ||||    
T  20745397 gggg 20745394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 204 - 255
Target Start/End: Original strand, 12801899 - 12801950
Alignment:
Q  204 ttcccattattccgttaatgggccatccggacatccactcatgttgagtcca 255  Q
    ||||||||||||| |||||||| ||||| ||||||||||||| |||||||||    
T  12801899 ttcccattattccattaatgggtcatccagacatccactcatattgagtcca 12801950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 21 - 59
Target Start/End: Original strand, 32035450 - 32035488
Alignment:
Q  21 ccctctcatcaacaacgataaccatagagaggagatgat 59  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  32035450 ccctctcatcaacaacgataaccaaagagaggagatgat 32035488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 151; Significance: 5e-80; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 21 - 260
Target Start/End: Original strand, 173054 - 173303
Alignment:
Q  21 ccctctcatcaacaacgataaccatagagaggagatgatctgaaacgcacaatagagttagcggcggctgatttggttcttcctcaaccggtacctttat 120  Q
    |||||| ||||||||||||||||| |||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  173054 ccctcttatcaacaacgataaccaaagagagaagatgatctgaaacacacaatagagttagcggcggctgatttggttcttcctcaaccagtacctttat 173153  T
Q  121 gccttaagttctcttcagatggggagaagagagagtttgccgtgtacggtgtattggggac----------tttatattggatggccattagg--ttccc 208  Q
    |||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||          ||||||||||||| ||||||||  |||||    
T  173154 gcctcaagttctcttcagatggggagaagagagagtttgccgtatacggtgtattggggaccatagcctcttttatattggatgaccattagggtttccc 173253  T
Q  209 attattccgttaatgggccatccggacatccactcatgttgagtccatatca 260  Q
    |||||||||||||| |  ||||||||||||||||||  ||||||||||||||    
T  173254 attattccgttaatagaacatccggacatccactca--ttgagtccatatca 173303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0363 (Bit Score: 125; Significance: 2e-64; HSPs: 2)
Name: scaffold0363
Description:

Target: scaffold0363; HSP #1
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 21 - 181
Target Start/End: Original strand, 783 - 943
Alignment:
Q  21 ccctctcatcaacaacgataaccatagagaggagatgatctgaaacgcacaatagagttagcggcggctgatttggttcttcctcaaccggtacctttat 120  Q
    |||||| |||||| |||||||||| |||||| |||||||||||||| ||||||||  ||||||||||||||||||||||||||||||||||||| |||||    
T  783 ccctctaatcaacgacgataaccaaagagagaagatgatctgaaacacacaatagttttagcggcggctgatttggttcttcctcaaccggtacgtttat 882  T
Q  121 gccttaagttctcttcagatggggagaagagagagtttgccgtgtacggtgtattggggac 181  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  883 gcctcaagttctcttcagatggggagaagagagagtttgccgtgtacggtgtattggggac 943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0363; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 204 - 245
Target Start/End: Original strand, 958 - 999
Alignment:
Q  204 ttcccattattccgttaatgggccatccggacatccactcat 245  Q
    ||||||||||| |||||||||| |||||| ||||||||||||    
T  958 ttcccattatttcgttaatgggacatccgaacatccactcat 999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0440 (Bit Score: 124; Significance: 7e-64; HSPs: 1)
Name: scaffold0440
Description:

Target: scaffold0440; HSP #1
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 21 - 260
Target Start/End: Original strand, 1358 - 1601
Alignment:
Q  21 ccctctcatcaacaacgataaccatagagaggagatgatctgaaacgcacaatagagttagcggcggctgatttggttcttcctcaaccggtacctttat 120  Q
    |||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||| ||||||||||| ||||||||||||||| |||||    
T  1358 ccctctcatcaacaacgataaccaaagagaggagatgatctgaaacacacaatagagttagcggcgactgatttggtttttcctcaaccggtacatttat 1457  T
Q  121 gccttaagttctcttcagatggggagaagagagagtttgccgtgtacggtgtattggggac----------tttatattggatggccattagg--ttccc 208  Q
    |||| ||||||||||||||||||||||||||||||||||| ||||| | | ||||||||||          ||||||||||||||||||||||  || ||    
T  1458 gcctcaagttctcttcagatggggagaagagagagtttgcggtgtatgatatattggggaccatagcctcttttatattggatggccattaggattttcc 1557  T
Q  209 attattccgttaatgggccatccggacatccactcatgttgagtccatatca 260  Q
    ||||||||      ||| ||||||||||||||||||  ||||||||||||||    
T  1558 attattcc------gggtcatccggacatccactca--ttgagtccatatca 1601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1114 (Bit Score: 58; Significance: 2e-24; HSPs: 2)
Name: scaffold1114
Description:

Target: scaffold1114; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 77 - 150
Target Start/End: Complemental strand, 1023 - 950
Alignment:
Q  77 gttagcggcggctgatttggttcttcctcaaccggtacctttatgccttaagttctcttcagatggggagaaga 150  Q
    ||||| |||||||||||||||||||||||||||| || |||||||||| |||||||||||||||||||||||||    
T  1023 gttagtggcggctgatttggttcttcctcaaccgttatctttatgcctcaagttctcttcagatggggagaaga 950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1114; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 130 - 245
Target Start/End: Complemental strand, 949 - 822
Alignment:
Q  130 tctcttcagatggggagaagagagagtttgccgtgtacggtgtattggggac----------tttatattggatggccattagg--ttcccattattccg 217  Q
    |||||||||||||||||||||||||||||| ||||||| |||||||||||||          ||||||||||||| ||||||||  |||||||||||| |    
T  949 tctcttcagatggggagaagagagagtttgtcgtgtacagtgtattggggaccatagcctcttttatattggatgaccattagggtttcccattattctg 850  T
Q  218 ttaatgggccatccggacatccactcat 245  Q
    |||||||| ||||  ||||| |||||||    
T  849 ttaatgggtcatctagacattcactcat 822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0236 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0236
Description:

Target: scaffold0236; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 21 - 86
Target Start/End: Complemental strand, 5530 - 5465
Alignment:
Q  21 ccctctcatcaacaacgataaccatagagaggagatgatctgaaacgcacaatagagttagcggcg 86  Q
    |||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||    
T  5530 ccctctcatcaacaacgataaccaaagagaggagatgatctgaaacacacaatagagttagcggcg 5465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0185 (Bit Score: 48; Significance: 2e-18; HSPs: 2)
Name: scaffold0185
Description:

Target: scaffold0185; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 182 - 260
Target Start/End: Complemental strand, 5792 - 5713
Alignment:
Q  182 tttatattggatggccattaggtt-cccattattccgttaatgggccatccggacatccactcatgttgagtccatatca 260  Q
    ||||||||| |||||| ||||||| |||||||||| ||||||||| |||||| |||||||||||| ||||||||||||||    
T  5792 tttatattgaatggccgttaggtttcccattattctgttaatgggtcatccgaacatccactcatattgagtccatatca 5713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0185; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 22 - 135
Target Start/End: Complemental strand, 5942 - 5826
Alignment:
Q  22 cctctcatcaacaacgataaccataga-gaggagatgatctgaaacgcacaa--tagagttagcggcggctgatttggttcttcctcaaccggtaccttt 118  Q
    ||||||| ||||||||||||  | ||| || | |||| ||| ||||||||||  ||| ||||||| || || |||||||||||||||||||||||| |||    
T  5942 cctctcaacaacaacgataaggaaagaagatgtgatggtctaaaacgcacaacatagggttagcgacgactaatttggttcttcctcaaccggtacattt 5843  T
Q  119 atgccttaagttctctt 135  Q
    |||||| ||||| ||||    
T  5842 atgcctcaagttatctt 5826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 182 - 245
Target Start/End: Complemental strand, 14097 - 14032
Alignment:
Q  182 tttatattggatggccattagg--ttcccattattccgttaatgggccatccggacatccactcat 245  Q
    ||||||||||||| ||||||||  |||||||||||||||||||||| |||||||||||||||||||    
T  14097 tttatattggatgaccattagggtttcccattattccgttaatgggtcatccggacatccactcat 14032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0085 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 96 - 177
Target Start/End: Complemental strand, 38347 - 38265
Alignment:
Q  96 gttcttcctcaaccggtacctttatgccttaagttctcttcagatggggagaagagagagt-ttgccgtgtacggtgtattgg 177  Q
    ||||||||||||| | |||||||||| || |||||||||||||||||| |||| |||| || ||  | |||||||||||||||    
T  38347 gttcttcctcaactgatacctttatgtctcaagttctcttcagatgggaagaatagagtgtattatcatgtacggtgtattgg 38265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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