View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19267_high_31 (Length: 379)

Name: NF19267_high_31
Description: NF19267
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19267_high_31
NF19267_high_31
[»] chr7 (46 HSPs)
chr7 (121-226)||(22343360-22343455)
chr7 (32-91)||(38044321-38044380)
chr7 (31-91)||(22343485-22343545)
chr7 (33-91)||(8238337-8238395)
chr7 (121-226)||(41915740-41915835)
chr7 (35-91)||(41915865-41915921)
chr7 (121-226)||(38044196-38044291)
chr7 (35-91)||(7728030-7728086)
chr7 (27-91)||(32564338-32564402)
chr7 (121-226)||(7727905-7728000)
chr7 (121-225)||(32564432-32564526)
chr7 (33-78)||(40846031-40846076)
chr7 (121-225)||(8238212-8238307)
chr7 (179-225)||(40846167-40846213)
chr7 (31-84)||(46033717-46033770)
chr7 (33-84)||(21234532-21234583)
chr7 (33-84)||(46374742-46374793)
chr7 (37-91)||(4999436-4999490)
chr7 (176-226)||(10343614-10343664)
chr7 (176-226)||(18207179-18207229)
chr7 (125-171)||(35522920-35522966)
chr7 (125-171)||(46374812-46374858)
chr7 (177-226)||(8080435-8080484)
chr7 (16-84)||(35523007-35523075)
chr7 (175-226)||(11044187-11044238)
chr7 (191-226)||(12310905-12310940)
chr7 (33-84)||(31736008-31736059)
chr7 (176-226)||(7389388-7389438)
chr7 (32-78)||(12311041-12311087)
chr7 (37-91)||(19329966-19330020)
chr7 (37-91)||(32951415-32951469)
chr7 (176-226)||(36208172-36208222)
chr7 (176-226)||(36361964-36362014)
chr7 (176-226)||(36362025-36362075)
chr7 (37-91)||(36362138-36362192)
chr7 (37-91)||(38837341-38837395)
chr7 (37-91)||(40957831-40957885)
chr7 (34-91)||(2318160-2318217)
chr7 (42-91)||(19436114-19436163)
chr7 (125-166)||(26296693-26296734)
chr7 (176-225)||(35137533-35137582)
chr7 (176-225)||(39255974-39256023)
chr7 (37-85)||(8080305-8080353)
chr7 (32-80)||(26296779-26296827)
chr7 (186-226)||(38837216-38837256)
chr7 (33-85)||(41423812-41423864)
[»] chr4 (36 HSPs)
chr4 (31-91)||(55475315-55475375)
chr4 (33-91)||(19670634-19670692)
chr4 (121-226)||(19670722-19670817)
chr4 (33-91)||(29547877-29547935)
chr4 (31-91)||(50813808-50813868)
chr4 (33-91)||(18924413-18924471)
chr4 (121-226)||(47986207-47986302)
chr4 (36-91)||(17983664-17983719)
chr4 (33-91)||(29589658-29589716)
chr4 (121-226)||(32766957-32767052)
chr4 (33-91)||(32767082-32767140)
chr4 (33-91)||(47986332-47986389)
chr4 (121-226)||(50813898-50813993)
chr4 (121-226)||(29547965-29548060)
chr4 (33-91)||(44536664-44536722)
chr4 (121-226)||(55475190-55475285)
chr4 (176-225)||(55079765-55079814)
chr4 (121-207)||(17983749-17983825)
chr4 (35-91)||(40574903-40574959)
chr4 (33-69)||(55079641-55079677)
chr4 (37-91)||(6034168-6034222)
chr4 (176-225)||(6034044-6034093)
chr4 (176-225)||(11511513-11511562)
chr4 (176-225)||(40574779-40574828)
chr4 (177-225)||(8343215-8343263)
chr4 (181-225)||(18924551-18924595)
chr4 (33-85)||(29240016-29240068)
chr4 (31-91)||(41824006-41824066)
chr4 (33-85)||(50526089-50526141)
chr4 (34-69)||(8343092-8343127)
chr4 (176-226)||(480498-480548)
chr4 (121-171)||(29589746-29589796)
chr4 (37-91)||(41236471-41236525)
chr4 (37-91)||(42044289-42044343)
chr4 (37-90)||(48182971-48183024)
chr4 (186-226)||(44536806-44536846)
[»] chr8 (32 HSPs)
chr8 (32-91)||(32707920-32707979)
chr8 (121-226)||(16383376-16383471)
chr8 (36-91)||(16056322-16056377)
chr8 (32-91)||(32032848-32032907)
chr8 (37-91)||(24307715-24307769)
chr8 (121-226)||(24307799-24307894)
chr8 (37-91)||(30479396-30479450)
chr8 (121-226)||(34307215-34307310)
chr8 (37-91)||(34307340-34307394)
chr8 (121-226)||(16056407-16056502)
chr8 (35-78)||(16384026-16384069)
chr8 (176-226)||(24307628-24307678)
chr8 (179-225)||(30479528-30479574)
chr8 (30-85)||(8841347-8841402)
chr8 (36-91)||(40423864-40423919)
chr8 (33-84)||(43414499-43414550)
chr8 (125-225)||(15048192-15048281)
chr8 (121-226)||(32032724-32032818)
chr8 (176-225)||(1179991-1180040)
chr8 (176-225)||(34012347-34012396)
chr8 (32-85)||(37038609-37038662)
chr8 (33-85)||(10284549-10284601)
chr8 (33-85)||(42354506-42354558)
chr8 (176-223)||(10621138-10621185)
chr8 (37-91)||(504043-504097)
chr8 (37-91)||(12831171-12831225)
chr8 (37-91)||(23122519-23122573)
chr8 (121-175)||(32708011-32708065)
chr8 (176-225)||(504172-504221)
chr8 (176-225)||(12831047-12831096)
chr8 (33-89)||(30183794-30183850)
chr8 (30-58)||(40467857-40467885)
[»] chr6 (22 HSPs)
chr6 (32-91)||(4231672-4231731)
chr6 (121-226)||(15990048-15990143)
chr6 (121-226)||(30341366-30341461)
chr6 (121-225)||(15508030-15508124)
chr6 (32-91)||(15989959-15990018)
chr6 (33-91)||(30341278-30341336)
chr6 (33-91)||(15507942-15508000)
chr6 (121-225)||(4231548-4231642)
chr6 (37-91)||(17598678-17598732)
chr6 (31-84)||(31976379-31976432)
chr6 (176-220)||(22880709-22880753)
chr6 (176-220)||(28536537-28536581)
chr6 (178-226)||(31110812-31110860)
chr6 (32-79)||(22421996-22422043)
chr6 (33-84)||(31110679-31110730)
chr6 (37-91)||(11427742-11427796)
chr6 (37-91)||(22880580-22880634)
chr6 (35-85)||(28536408-28536458)
chr6 (37-91)||(29857951-29858005)
chr6 (176-218)||(32869685-32869727)
chr6 (176-225)||(31953081-31953130)
chr6 (33-85)||(31952948-31953000)
[»] chr5 (22 HSPs)
chr5 (121-226)||(3921271-3921366)
chr5 (33-91)||(2252086-2252144)
chr5 (121-226)||(2252174-2252269)
chr5 (33-91)||(3921183-3921241)
chr5 (33-91)||(39688815-39688873)
chr5 (37-91)||(35785323-35785377)
chr5 (35-85)||(35943812-35943862)
chr5 (176-226)||(39688948-39688998)
chr5 (126-225)||(28177775-28177864)
chr5 (33-84)||(15409528-15409579)
chr5 (176-225)||(33149689-33149738)
chr5 (176-220)||(18520935-18520979)
chr5 (33-85)||(31009118-31009170)
chr5 (176-220)||(36875654-36875698)
chr5 (125-171)||(15409620-15409666)
chr5 (37-91)||(18520806-18520860)
chr5 (176-226)||(36732993-36733043)
chr5 (126-171)||(6679742-6679787)
chr5 (176-225)||(35785199-35785248)
chr5 (176-225)||(35943943-35943992)
chr5 (177-225)||(26720516-26720564)
chr5 (177-225)||(26990265-26990313)
[»] chr1 (23 HSPs)
chr1 (121-225)||(50591006-50591100)
chr1 (31-91)||(50590916-50590976)
chr1 (33-91)||(5958918-5958976)
chr1 (33-91)||(47748566-47748624)
chr1 (30-91)||(41608408-41608469)
chr1 (121-225)||(41608499-41608593)
chr1 (31-91)||(44332287-44332347)
chr1 (121-226)||(5959006-5959101)
chr1 (176-225)||(3000319-3000368)
chr1 (31-84)||(32813378-32813431)
chr1 (176-226)||(2581914-2581964)
chr1 (125-226)||(32813246-32813337)
chr1 (176-226)||(38595153-38595203)
chr1 (176-225)||(9474927-9474976)
chr1 (176-225)||(47452371-47452420)
chr1 (176-225)||(47748443-47748491)
chr1 (32-85)||(51898600-51898653)
chr1 (37-91)||(27564657-27564711)
chr1 (37-91)||(37649322-37649376)
chr1 (37-91)||(41758929-41758983)
chr1 (37-91)||(48716204-48716258)
chr1 (32-81)||(6261004-6261053)
chr1 (123-171)||(44332379-44332427)
[»] chr2 (37 HSPs)
chr2 (32-91)||(43490245-43490304)
chr2 (33-91)||(13365477-13365535)
chr2 (121-225)||(43490121-43490215)
chr2 (36-91)||(2997408-2997463)
chr2 (32-91)||(3034900-3034959)
chr2 (33-91)||(38732478-38732536)
chr2 (121-226)||(45097741-45097836)
chr2 (121-226)||(13365350-13365447)
chr2 (121-225)||(38732354-38732448)
chr2 (125-225)||(40613912-40614002)
chr2 (29-85)||(20700945-20701001)
chr2 (121-207)||(2997493-2997569)
chr2 (33-91)||(45097653-45097711)
chr2 (33-89)||(17823914-17823970)
chr2 (33-84)||(40613820-40613871)
chr2 (176-226)||(9058479-9058529)
chr2 (176-226)||(26891555-26891605)
chr2 (176-226)||(33436151-33436201)
chr2 (37-91)||(40701602-40701656)
chr2 (33-81)||(3440113-3440161)
chr2 (29-81)||(3738077-3738129)
chr2 (176-220)||(28863460-28863504)
chr2 (35-91)||(41758711-41758767)
chr2 (123-165)||(3034991-3035033)
chr2 (37-91)||(4060809-4060863)
chr2 (37-91)||(10249304-10249358)
chr2 (37-91)||(19930742-19930796)
chr2 (180-226)||(30915462-30915508)
chr2 (37-91)||(30915587-30915641)
chr2 (125-171)||(42257237-42257283)
chr2 (34-76)||(44152066-44152108)
chr2 (176-225)||(17820055-17820104)
chr2 (179-220)||(19930874-19930915)
chr2 (125-166)||(36168885-36168926)
chr2 (31-84)||(36168967-36169020)
chr2 (176-225)||(40701478-40701527)
chr2 (178-226)||(15428793-15428841)
[»] chr3 (33 HSPs)
chr3 (33-91)||(42823235-42823293)
chr3 (33-91)||(45058471-45058529)
chr3 (33-91)||(36331247-36331305)
chr3 (123-225)||(45058561-45058652)
chr3 (33-87)||(30801651-30801705)
chr3 (33-84)||(51419278-51419329)
chr3 (121-171)||(36331335-36331385)
chr3 (33-90)||(35965700-35965757)
chr3 (33-85)||(33118768-33118820)
chr3 (33-84)||(20764833-20764884)
chr3 (33-84)||(26141448-26141499)
chr3 (179-226)||(36331432-36331479)
chr3 (176-226)||(11095404-11095454)
chr3 (125-171)||(11907415-11907461)
chr3 (176-226)||(33118902-33118952)
chr3 (176-222)||(42823114-42823160)
chr3 (176-226)||(49607413-49607463)
chr3 (37-91)||(54868817-54868871)
chr3 (176-225)||(8076393-8076442)
chr3 (176-225)||(14623890-14623939)
chr3 (176-221)||(52629304-52629349)
chr3 (176-225)||(53982011-53982060)
chr3 (176-220)||(13898106-13898150)
chr3 (33-85)||(35536756-35536808)
chr3 (33-84)||(41189682-41189733)
chr3 (296-362)||(1028562-1028628)
chr3 (125-171)||(20764925-20764971)
chr3 (125-171)||(51419370-51419416)
chr3 (176-226)||(54868946-54868996)
chr3 (176-225)||(26141583-26141632)
chr3 (125-166)||(47531914-47531955)
chr3 (33-85)||(8076523-8076575)
chr3 (33-81)||(26754829-26754877)
[»] scaffold0018 (2 HSPs)
scaffold0018 (34-91)||(152622-152679)
scaffold0018 (176-212)||(152511-152547)
[»] scaffold0110 (1 HSPs)
scaffold0110 (33-91)||(8781-8839)
[»] scaffold0316 (1 HSPs)
scaffold0316 (33-80)||(17238-17285)
[»] scaffold0237 (1 HSPs)
scaffold0237 (37-91)||(4153-4207)


Alignment Details
Target: chr7 (Bit Score: 63; Significance: 3e-27; HSPs: 46)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 121 - 226
Target Start/End: Complemental strand, 22343455 - 22343360
Alignment:
Q  121 tgtacttgtgcggggtccatatggtcacgtgtcagatttttgtgtgagtgtattggggtgtcaaggggtgtatttccacctaagggtgtttatgtatcat 220  Q
    |||||||||||||||||||||||||||| |||||||||||||||||          |||||||||||||||||| |||||||||||||||||||||||||    
T  22343455 tgtacttgtgcggggtccatatggtcacatgtcagatttttgtgtg----------ggtgtcaaggggtgtattgccacctaagggtgtttatgtatcat 22343366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 32 - 91
Target Start/End: Complemental strand, 38044380 - 38044321
Alignment:
Q  32 tggaaaatgttacatagacaccttttaattgcatacacccttgtacaccccatgtattag 91  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38044380 tggaaaatgttacatagacaccttttaattgcatacacccttgtacaccccatgtattag 38044321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 31 - 91
Target Start/End: Complemental strand, 22343545 - 22343485
Alignment:
Q  31 atggaaaatgttacatagacaccttttaattgcatacacccttgtacaccccatgtattag 91  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  22343545 atggaaaatgttacatagacaccttttaattgcatacacccttgtacacctcatgtattag 22343485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 33 - 91
Target Start/End: Complemental strand, 8238395 - 8238337
Alignment:
Q  33 ggaaaatgttacatagacaccttttaattgcatacacccttgtacaccccatgtattag 91  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  8238395 ggaaaatgttacatagacgccttttaattgcatacacccttgtacaccccatgtattag 8238337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 121 - 226
Target Start/End: Complemental strand, 41915835 - 41915740
Alignment:
Q  121 tgtacttgtgcggggtccatatggtcacgtgtcagatttttgtgtgagtgtattggggtgtcaaggggtgtatttccacctaagggtgtttatgtatcat 220  Q
    |||||||||||||||||||||||| ||| ||||||||||||||||           |||||||||||||||||| |||||||||||||||||||||||||    
T  41915835 tgtacttgtgcggggtccatatggccacatgtcagatttttgtgta----------ggtgtcaaggggtgtattgccacctaagggtgtttatgtatcat 41915746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 35 - 91
Target Start/End: Complemental strand, 41915921 - 41915865
Alignment:
Q  35 aaaatgttacatagacaccttttaattgcatacacccttgtacaccccatgtattag 91  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  41915921 aaaatgttacatagacaccttttaattgcatacacccttgtacaccccatatattag 41915865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 121 - 226
Target Start/End: Complemental strand, 38044291 - 38044196
Alignment:
Q  121 tgtacttgtgcggggtccatatggtcacgtgtcagatttttgtgtgagtgtattggggtgtcaaggggtgtatttccacctaagggtgtttatgtatcat 220  Q
    ||||||||||||||||||||||||  || |||||||||||||||||          | |||||||||||||||| |||||||||||||||||||||||||    
T  38044291 tgtacttgtgcggggtccatatggctacatgtcagatttttgtgtg----------gatgtcaaggggtgtattgccacctaagggtgtttatgtatcat 38044202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 35 - 91
Target Start/End: Complemental strand, 7728086 - 7728030
Alignment:
Q  35 aaaatgttacatagacaccttttaattgcatacacccttgtacaccccatgtattag 91  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||    
T  7728086 aaaatgttacatagacaccttttaattgcatacatccttgtacaccccatatattag 7728030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 27 - 91
Target Start/End: Original strand, 32564338 - 32564402
Alignment:
Q  27 aagaatggaaaatgttacatagacaccttttaattgcatacacccttgtacaccccatgtattag 91  Q
    ||||| |||| ||||||||||||||  ||||||||||||||||||||||||||| ||||||||||    
T  32564338 aagaaaggaagatgttacatagacatattttaattgcatacacccttgtacacctcatgtattag 32564402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 121 - 226
Target Start/End: Complemental strand, 7728000 - 7727905
Alignment:
Q  121 tgtacttgtgcggggtccatatggtcacgtgtcagatttttgtgtgagtgtattggggtgtcaaggggtgtatttccacctaagggtgtttatgtatcat 220  Q
    |||||||||||||||||||||||  ||| |||||||||||| ||||| |||          |||| |||||||| |||||||||||||||||||||||||    
T  7728000 tgtacttgtgcggggtccatatgaccacatgtcagatttttatgtgaatgt----------caagaggtgtattaccacctaagggtgtttatgtatcat 7727911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 121 - 225
Target Start/End: Original strand, 32564432 - 32564526
Alignment:
Q  121 tgtacttgtgcggggtccatatggtcacgtgtcagatttttgtgtgagtgtattggggtgtcaaggggtgtatttccacctaagggtgtttatgtatcat 220  Q
    |||| ||||||||||||||||| | ||| |||||||||||||||||          |||||||||||||||||| |||||||||  ||||||||||||||    
T  32564432 tgtatttgtgcggggtccatatagccacatgtcagatttttgtgtg----------ggtgtcaaggggtgtattgccacctaagaatgtttatgtatcat 32564521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 33 - 78
Target Start/End: Original strand, 40846031 - 40846076
Alignment:
Q  33 ggaaaatgttacatagacaccttttaattgcatacacccttgtaca 78  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||    
T  40846031 ggaaaatgttacatagataccttttaattgcatacacccttgtaca 40846076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 121 - 225
Target Start/End: Complemental strand, 8238307 - 8238212
Alignment:
Q  121 tgtacttgtgcggggtccatatggtcacgtgtcagatttttgtgtgagtgtattggggtgtcaaggggtgtatttccaccta-agggtgtttatgtatca 219  Q
    |||||||||||||||||||||||   || |||||||||||||||||          |||||||| ||||||||| ||||||| |||||||||||||||||    
T  8238307 tgtacttgtgcggggtccatatgactacatgtcagatttttgtgtg----------ggtgtcaaagggtgtattgccacctacagggtgtttatgtatca 8238218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 179 - 225
Target Start/End: Original strand, 40846167 - 40846213
Alignment:
Q  179 tgtcaaggggtgtatttccacctaagggtgtttatgtatcataactc 225  Q
    |||||||||||||||| |||||||||| |||||||||||||||||||    
T  40846167 tgtcaaggggtgtattgccacctaaggatgtttatgtatcataactc 40846213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 31 - 84
Target Start/End: Original strand, 46033717 - 46033770
Alignment:
Q  31 atggaaaatgttacatagacaccttttaattgcatacacccttgtacaccccat 84  Q
    ||||||||||||||||||||||| |||| |  ||||||||||||||||||||||    
T  46033717 atggaaaatgttacatagacaccatttattctcatacacccttgtacaccccat 46033770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 33 - 84
Target Start/End: Complemental strand, 21234583 - 21234532
Alignment:
Q  33 ggaaaatgttacatagacaccttttaattgcatacacccttgtacaccccat 84  Q
    |||||||||||||||||||||||||| |  |||||||| |||||||||||||    
T  21234583 ggaaaatgttacatagacaccttttattctcatacaccattgtacaccccat 21234532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 33 - 84
Target Start/End: Original strand, 46374742 - 46374793
Alignment:
Q  33 ggaaaatgttacatagacaccttttaattgcatacacccttgtacaccccat 84  Q
    ||||||||||||||||||||| |||| |  ||||||||||||||||||||||    
T  46374742 ggaaaatgttacatagacaccatttattcccatacacccttgtacaccccat 46374793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 37 - 91
Target Start/End: Original strand, 4999436 - 4999490
Alignment:
Q  37 aatgttacatagacaccttttaattgcatacacccttgtacaccccatgtattag 91  Q
    |||| ||||||||||||||||| |  ||||||||||||||||||||||| |||||    
T  4999436 aatgatacatagacaccttttattctcatacacccttgtacaccccatgcattag 4999490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 176 - 226
Target Start/End: Original strand, 10343614 - 10343664
Alignment:
Q  176 gggtgtcaaggggtgtatttccacctaagggtgtttatgtatcataactct 226  Q
    ||||||||||  |||||||||||||||||||||| |||||||||| |||||    
T  10343614 gggtgtcaagatgtgtatttccacctaagggtgtctatgtatcattactct 10343664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 176 - 226
Target Start/End: Complemental strand, 18207229 - 18207179
Alignment:
Q  176 gggtgtcaaggggtgtatttccacctaagggtgtttatgtatcataactct 226  Q
    |||||||||| |||||||| |||||||||| ||| ||||||||||||||||    
T  18207229 gggtgtcaagaggtgtattgccacctaaggttgtctatgtatcataactct 18207179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 125 - 171
Target Start/End: Complemental strand, 35522966 - 35522920
Alignment:
Q  125 cttgtgcggggtccatatggtcacgtgtcagatttttgtgtgagtgt 171  Q
    |||||||||| ||||||||| ||||||||||||||||||||| ||||    
T  35522966 cttgtgcgggatccatatggccacgtgtcagatttttgtgtgggtgt 35522920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 125 - 171
Target Start/End: Original strand, 46374812 - 46374858
Alignment:
Q  125 cttgtgcggggtccatatggtcacgtgtcagatttttgtgtgagtgt 171  Q
    |||||||||||||||| ||| ||||||||||||||||||||| ||||    
T  46374812 cttgtgcggggtccatgtggccacgtgtcagatttttgtgtgggtgt 46374858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 177 - 226
Target Start/End: Original strand, 8080435 - 8080484
Alignment:
Q  177 ggtgtcaaggggtgtatttccacctaagggtgtttatgtatcataactct 226  Q
    |||||||| ||||||||| |||||||||||||| |||||||||| |||||    
T  8080435 ggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactct 8080484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 84
Target Start/End: Complemental strand, 35523075 - 35523007
Alignment:
Q  16 atcaccatgagaagaatggaaaatgttacatagacaccttttaattgcatacacccttgtacaccccat 84  Q
    |||||||| | || || ||||||||||||||| ||||| |||| |  ||||||||||||||||||||||    
T  35523075 atcaccataaaaaaaaaggaaaatgttacataaacaccatttattcccatacacccttgtacaccccat 35523007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 175 - 226
Target Start/End: Complemental strand, 11044238 - 11044187
Alignment:
Q  175 ggggtgtcaaggggtgtatttccacctaagggtgtttatgtatcataactct 226  Q
    |||||||||| || |||||| |||||||||||||| |||||||||| |||||    
T  11044238 ggggtgtcaaaggatgtattgccacctaagggtgtctatgtatcattactct 11044187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 191 - 226
Target Start/End: Complemental strand, 12310940 - 12310905
Alignment:
Q  191 tatttccacctaagggtgtttatgtatcataactct 226  Q
    ||||||||||||||||||| ||||||||||||||||    
T  12310940 tatttccacctaagggtgtctatgtatcataactct 12310905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 33 - 84
Target Start/End: Complemental strand, 31736059 - 31736008
Alignment:
Q  33 ggaaaatgttacatagacaccttttaattgcatacacccttgtacaccccat 84  Q
    ||||||||||| ||||| |||||||| |  ||||||||||||||||||||||    
T  31736059 ggaaaatgttagatagataccttttattcccatacacccttgtacaccccat 31736008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 176 - 226
Target Start/End: Complemental strand, 7389438 - 7389388
Alignment:
Q  176 gggtgtcaaggggtgtatttccacctaagggtgtttatgtatcataactct 226  Q
    ||||||||| | ||||||| |||||||||||||| |||||||||| |||||    
T  7389438 gggtgtcaaagagtgtattgccacctaagggtgtctatgtatcattactct 7389388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 32 - 78
Target Start/End: Complemental strand, 12311087 - 12311041
Alignment:
Q  32 tggaaaatgttacatagacaccttttaattgcatacacccttgtaca 78  Q
    |||||||||||||||||||||| |||| || |||||||| |||||||    
T  12311087 tggaaaatgttacatagacaccctttatttccatacacctttgtaca 12311041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 37 - 91
Target Start/End: Complemental strand, 19330020 - 19329966
Alignment:
Q  37 aatgttacatagacaccttttaattgcatacacccttgtacaccccatgtattag 91  Q
    |||| |||||||||||| |||| |  ||||||||||||||||||||||| |||||    
T  19330020 aatgatacatagacaccctttattcccatacacccttgtacaccccatgcattag 19329966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 37 - 91
Target Start/End: Original strand, 32951415 - 32951469
Alignment:
Q  37 aatgttacatagacaccttttaattgcatacacccttgtacaccccatgtattag 91  Q
    |||| ||||||||||||  ||| |  |||||||||||||||||||||||||||||    
T  32951415 aatgatacatagacaccccttattctcatacacccttgtacaccccatgtattag 32951469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 176 - 226
Target Start/End: Complemental strand, 36208222 - 36208172
Alignment:
Q  176 gggtgtcaaggggtgtatttccacctaagggtgtttatgtatcataactct 226  Q
    ||||||||| |  |||||| |||||||||||||| ||||||||||||||||    
T  36208222 gggtgtcaatgaatgtattaccacctaagggtgtctatgtatcataactct 36208172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 176 - 226
Target Start/End: Original strand, 36361964 - 36362014
Alignment:
Q  176 gggtgtcaaggggtgtatttccacctaagggtgtttatgtatcataactct 226  Q
    ||||||||| || |||||| |||||||||||||| |||||||||| |||||    
T  36361964 gggtgtcaaaggatgtattgccacctaagggtgtctatgtatcattactct 36362014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 176 - 226
Target Start/End: Complemental strand, 36362075 - 36362025
Alignment:
Q  176 gggtgtcaaggggtgtatttccacctaagggtgtttatgtatcataactct 226  Q
    ||||||||| || |||||| |||||||||||||| |||||||||| |||||    
T  36362075 gggtgtcaaaggatgtattaccacctaagggtgtctatgtatcattactct 36362025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 37 - 91
Target Start/End: Complemental strand, 36362192 - 36362138
Alignment:
Q  37 aatgttacatagacaccttttaattgcatacacccttgtacaccccatgtattag 91  Q
    |||| |||||||||||| |||| |  |||||||||||||||| ||||||||||||    
T  36362192 aatgatacatagacaccctttattctcatacacccttgtacatcccatgtattag 36362138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 37 - 91
Target Start/End: Complemental strand, 38837395 - 38837341
Alignment:
Q  37 aatgttacatagacaccttttaattgcatacacccttgtacaccccatgtattag 91  Q
    |||| |||||||||||| |||| || |||||||||||||||| |||||| |||||    
T  38837395 aatgatacatagacaccctttatttccatacacccttgtacatcccatgcattag 38837341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 37 - 91
Target Start/End: Complemental strand, 40957885 - 40957831
Alignment:
Q  37 aatgttacatagacaccttttaattgcatacacccttgtacaccccatgtattag 91  Q
    |||| ||||||||||||  ||| || ||||||||||||||||||||||| |||||    
T  40957885 aatgatacatagacacccattattttcatacacccttgtacaccccatgcattag 40957831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 34 - 91
Target Start/End: Original strand, 2318160 - 2318217
Alignment:
Q  34 gaaaatgttacatagacaccttttaattgcatacacccttgtacaccccatgtattag 91  Q
    |||||||||||||||||||  |||| || |||||||| |||||||| ||||| |||||    
T  2318160 gaaaatgttacatagacacactttatttccatacacctttgtacactccatgcattag 2318217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 42 - 91
Target Start/End: Original strand, 19436114 - 19436163
Alignment:
Q  42 tacatagacaccttttaattgcatacacccttgtacaccccatgtattag 91  Q
    |||||||||||| |||| |  ||||||||||||||||||||||| |||||    
T  19436114 tacatagacaccatttattctcatacacccttgtacaccccatgcattag 19436163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 125 - 166
Target Start/End: Complemental strand, 26296734 - 26296693
Alignment:
Q  125 cttgtgcggggtccatatggtcacgtgtcagatttttgtgtg 166  Q
    |||||||||||||||||||| ||||| |||||||||| ||||    
T  26296734 cttgtgcggggtccatatggccacgtatcagatttttatgtg 26296693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 176 - 225
Target Start/End: Complemental strand, 35137582 - 35137533
Alignment:
Q  176 gggtgtcaaggggtgtatttccacctaagggtgtttatgtatcataactc 225  Q
    ||||||||| ||||||||| |||||||||||||| ||| |||||| ||||    
T  35137582 gggtgtcaaagggtgtattgccacctaagggtgtctatttatcattactc 35137533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 176 - 225
Target Start/End: Original strand, 39255974 - 39256023
Alignment:
Q  176 gggtgtcaaggggtgtatttccacctaagggtgtttatgtatcataactc 225  Q
    |||| ||||| |||||||| |||||||||| ||| |||||||||||||||    
T  39255974 gggtatcaagtggtgtattgccacctaaggttgtctatgtatcataactc 39256023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 37 - 85
Target Start/End: Original strand, 8080305 - 8080353
Alignment:
Q  37 aatgttacatagacaccttttaattgcatacacccttgtacaccccatg 85  Q
    |||| |||||||||||| |||| |  |||||||||||||||||||||||    
T  8080305 aatgatacatagacaccctttattcccatacacccttgtacaccccatg 8080353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 32 - 80
Target Start/End: Complemental strand, 26296827 - 26296779
Alignment:
Q  32 tggaaaatgttacatagacaccttttaattgcatacacccttgtacacc 80  Q
    ||||||||||||| |||||||| | || || ||||||||||||||||||    
T  26296827 tggaaaatgttacgtagacaccatatatttccatacacccttgtacacc 26296779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 186 - 226
Target Start/End: Complemental strand, 38837256 - 38837216
Alignment:
Q  186 gggtgtatttccacctaagggtgtttatgtatcataactct 226  Q
    ||||||||| |||||||||||||| |||||||||| |||||    
T  38837256 gggtgtattgccacctaagggtgtctatgtatcattactct 38837216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 33 - 85
Target Start/End: Complemental strand, 41423864 - 41423812
Alignment:
Q  33 ggaaaatgttacatagacaccttttaattgcatacacccttgtacaccccatg 85  Q
    ||||||||||||||| ||||| |||| |  |||||||| ||||||||||||||    
T  41423864 ggaaaatgttacataaacaccctttattctcatacacctttgtacaccccatg 41423812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 61; Significance: 4e-26; HSPs: 36)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 31 - 91
Target Start/End: Complemental strand, 55475375 - 55475315
Alignment:
Q  31 atggaaaatgttacatagacaccttttaattgcatacacccttgtacaccccatgtattag 91  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  55475375 atggaaaatgttacatagacaccttttaattgcatacacccttgtacaccccatgtattag 55475315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 33 - 91
Target Start/End: Original strand, 19670634 - 19670692
Alignment:
Q  33 ggaaaatgttacatagacaccttttaattgcatacacccttgtacaccccatgtattag 91  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19670634 ggaaaatgttacatagacaccttttaattgcatacacccttgtacaccccatgtattag 19670692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 121 - 226
Target Start/End: Original strand, 19670722 - 19670817
Alignment:
Q  121 tgtacttgtgcggggtccatatggtcacgtgtcagatttttgtgtgagtgtattggggtgtcaaggggtgtatttccacctaagggtgtttatgtatcat 220  Q
    |||||||||||||||||||||||| ||| ||||||||||||||||||||||          ||||||||||||| |||||||||||||||||||||||||    
T  19670722 tgtacttgtgcggggtccatatggccacatgtcagatttttgtgtgagtgt----------caaggggtgtattgccacctaagggtgtttatgtatcat 19670811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 33 - 91
Target Start/End: Original strand, 29547877 - 29547935
Alignment:
Q  33 ggaaaatgttacatagacaccttttaattgcatacacccttgtacaccccatgtattag 91  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29547877 ggaaaatgttacatagacaccttttaattgcatacacccttgtacaccccatgtattag 29547935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 31 - 91
Target Start/End: Original strand, 50813808 - 50813868
Alignment:
Q  31 atggaaaatgttacatagacaccttttaattgcatacacccttgtacaccccatgtattag 91  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||    
T  50813808 atggaaaatgttacatagacaccttttaattgcatacacccttgtacatctcatgtattag 50813868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 33 - 91
Target Start/End: Original strand, 18924413 - 18924471
Alignment:
Q  33 ggaaaatgttacatagacaccttttaattgcatacacccttgtacaccccatgtattag 91  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||    
T  18924413 ggaaaatgttacatagacaccttttaattgcatacacccttttacacctcatgtattag 18924471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 121 - 226
Target Start/End: Complemental strand, 47986302 - 47986207
Alignment:
Q  121 tgtacttgtgcggggtccatatggtcacgtgtcagatttttgtgtgagtgtattggggtgtcaaggggtgtatttccacctaagggtgtttatgtatcat 220  Q
    |||||||||||||||||||||||| ||| |||||||||||||||||          | ||||||||| |||||| |||||||||||||||||||||||||    
T  47986302 tgtacttgtgcggggtccatatggccacatgtcagatttttgtgtg----------gatgtcaagggatgtattgccacctaagggtgtttatgtatcat 47986213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 36 - 91
Target Start/End: Original strand, 17983664 - 17983719
Alignment:
Q  36 aaatgttacatagacaccttttaattgcatacacccttgtacaccccatgtattag 91  Q
    ||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||    
T  17983664 aaatgttacatagacactttttaattgcatacacccttgtacacctcatgtattag 17983719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 33 - 91
Target Start/End: Original strand, 29589658 - 29589716
Alignment:
Q  33 ggaaaatgttacatagacaccttttaattgcatacacccttgtacaccccatgtattag 91  Q
    ||||||| ||||||||||||||||||||||||||||| |||||||||| ||||||||||    
T  29589658 ggaaaatattacatagacaccttttaattgcatacactcttgtacacctcatgtattag 29589716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 121 - 226
Target Start/End: Complemental strand, 32767052 - 32766957
Alignment:
Q  121 tgtacttgtgcggggtccatatggtcacgtgtcagatttttgtgtgagtgtattggggtgtcaaggggtgtatttccacctaagggtgtttatgtatcat 220  Q
    ||||||||||| |||||||||||| ||| |||||||||||||| ||          |||||||||||||||||| ||||||||| |||||||||||||||    
T  32767052 tgtacttgtgcagggtccatatggccacatgtcagatttttgtatg----------ggtgtcaaggggtgtattgccacctaagagtgtttatgtatcat 32766963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 33 - 91
Target Start/End: Complemental strand, 32767140 - 32767082
Alignment:
Q  33 ggaaaatgttacatagacaccttttaattgcatacacccttgtacaccccatgtattag 91  Q
    |||||||||||||||||||| |||||||||||||||||||||||||| | |||||||||    
T  32767140 ggaaaatgttacatagacacattttaattgcatacacccttgtacactctatgtattag 32767082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 33 - 91
Target Start/End: Complemental strand, 47986389 - 47986332
Alignment:
Q  33 ggaaaatgttacatagacaccttttaattgcatacacccttgtacaccccatgtattag 91  Q
    |||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||    
T  47986389 ggaaaatgttacatagacaccttt-aattgcatacacccttgtacatcccatgtattag 47986332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 121 - 226
Target Start/End: Original strand, 50813898 - 50813993
Alignment:
Q  121 tgtacttgtgcggggtccatatggtcacgtgtcagatttttgtgtgagtgtattggggtgtcaaggggtgtatttccacctaagggtgtttatgtatcat 220  Q
    |||||||||||||||| ||||||  ||| |||||||||||||||||          |||||||||||||||||| ||||||||| |||||||||||||||    
T  50813898 tgtacttgtgcggggttcatatgaccacatgtcagatttttgtgtg----------ggtgtcaaggggtgtattaccacctaagagtgtttatgtatcat 50813987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 121 - 226
Target Start/End: Original strand, 29547965 - 29548060
Alignment:
Q  121 tgtacttgtgcggggtccatatggtcacgtgtcagatttttgtgtgagtgtattggggtgtcaaggggtgtatttccacctaagggtgtttatgtatcat 220  Q
    ||||||| |||||| ||||||||| ||| |||||||||||||||||          ||||||||||| |||||| |||||||||| ||||||||||||||    
T  29547965 tgtacttatgcgggatccatatggccacatgtcagatttttgtgtg----------ggtgtcaagggatgtattgccacctaaggatgtttatgtatcat 29548054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 33 - 91
Target Start/End: Original strand, 44536664 - 44536722
Alignment:
Q  33 ggaaaatgttacatagacaccttttaattgcatacacccttgtacaccccatgtattag 91  Q
    |||||||||||||||||||| |||||||||||||||  ||||||||||| |||||||||    
T  44536664 ggaaaatgttacatagacacattttaattgcatacattcttgtacaccctatgtattag 44536722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 121 - 226
Target Start/End: Complemental strand, 55475285 - 55475190
Alignment:
Q  121 tgtacttgtgcggggtccatatggtcacgtgtcagatttttgtgtgagtgtattggggtgtcaaggggtgtatttccacctaagggtgtttatgtatcat 220  Q
    ||||||| ||| |||||||||||| ||| |||||||||||||||||          |||||||| ||||||||| |||||||||| ||||||||||||||    
T  55475285 tgtacttatgcagggtccatatggccacatgtcagatttttgtgtg----------ggtgtcaaagggtgtattgccacctaaggatgtttatgtatcat 55475196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 176 - 225
Target Start/End: Original strand, 55079765 - 55079814
Alignment:
Q  176 gggtgtcaaggggtgtatttccacctaagggtgtttatgtatcataactc 225  Q
    |||||||||| |||||||| ||||||||||||||||||||||||||||||    
T  55079765 gggtgtcaagaggtgtattgccacctaagggtgtttatgtatcataactc 55079814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 121 - 207
Target Start/End: Original strand, 17983749 - 17983825
Alignment:
Q  121 tgtacttgtgcggggtccatatggtcacgtgtcagatttttgtgtgagtgtattggggtgtcaaggggtgtatttccacctaagggt 207  Q
    |||||||||||||||||||||||| ||| ||||||||||||||||          ||||||||||||||||||| ||||||||||||    
T  17983749 tgtacttgtgcggggtccatatggccacatgtcagatttttgtgt----------gggtgtcaaggggtgtattgccacctaagggt 17983825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 35 - 91
Target Start/End: Complemental strand, 40574959 - 40574903
Alignment:
Q  35 aaaatgttacatagacaccttttaattgcatacacccttgtacaccccatgtattag 91  Q
    ||||||||| |||||||||||||| |  |||||||||||||||||||||| ||||||    
T  40574959 aaaatgttagatagacaccttttattctcatacacccttgtacaccccatatattag 40574903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 33 - 69
Target Start/End: Original strand, 55079641 - 55079677
Alignment:
Q  33 ggaaaatgttacatagacaccttttaattgcatacac 69  Q
    |||||||||||||||||||||||||||||||||||||    
T  55079641 ggaaaatgttacatagacaccttttaattgcatacac 55079677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 37 - 91
Target Start/End: Complemental strand, 6034222 - 6034168
Alignment:
Q  37 aatgttacatagacaccttttaattgcatacacccttgtacaccccatgtattag 91  Q
    |||| ||||||||||||||||| |  ||||||||||||||||||||||| |||||    
T  6034222 aatgatacatagacaccttttattctcatacacccttgtacaccccatgcattag 6034168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 176 - 225
Target Start/End: Complemental strand, 6034093 - 6034044
Alignment:
Q  176 gggtgtcaaggggtgtatttccacctaagggtgtttatgtatcataactc 225  Q
    ||||||||| ||||||||| |||||||||||||| |||||||||| ||||    
T  6034093 gggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactc 6034044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 176 - 225
Target Start/End: Original strand, 11511513 - 11511562
Alignment:
Q  176 gggtgtcaaggggtgtatttccacctaagggtgtttatgtatcataactc 225  Q
    ||||||||| ||||||||| |||||||||||||| |||||||||| ||||    
T  11511513 gggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactc 11511562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 176 - 225
Target Start/End: Complemental strand, 40574828 - 40574779
Alignment:
Q  176 gggtgtcaaggggtgtatttccacctaagggtgtttatgtatcataactc 225  Q
    ||||||||| ||||||||| |||||||||| ||| |||||||||||||||    
T  40574828 gggtgtcaaagggtgtattaccacctaaggatgtctatgtatcataactc 40574779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 177 - 225
Target Start/End: Original strand, 8343215 - 8343263
Alignment:
Q  177 ggtgtcaaggggtgtatttccacctaagggtgtttatgtatcataactc 225  Q
    |||||||| || |||||| |||||||||| |||||||||||||||||||    
T  8343215 ggtgtcaaaggatgtattgccacctaaggatgtttatgtatcataactc 8343263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 181 - 225
Target Start/End: Original strand, 18924551 - 18924595
Alignment:
Q  181 tcaaggggtgtatttccacctaagggtgtttatgtatcataactc 225  Q
    |||||||||||||| |||||||||||| |||||| ||||||||||    
T  18924551 tcaaggggtgtattgccacctaagggtatttatggatcataactc 18924595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 33 - 85
Target Start/End: Complemental strand, 29240068 - 29240016
Alignment:
Q  33 ggaaaatgttacatagacaccttttaattgcatacacccttgtacaccccatg 85  Q
    ||||||||||||||||||||| |||| |  ||||||| |||||||||||||||    
T  29240068 ggaaaatgttacatagacaccctttattcccatacactcttgtacaccccatg 29240016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 31 - 91
Target Start/End: Complemental strand, 41824066 - 41824006
Alignment:
Q  31 atggaaaatgttacatagacaccttttaattgcatacacccttgtacaccccatgtattag 91  Q
    ||||||||||||||||||||||| |||| |  |||||||| ||||||||| |||| |||||    
T  41824066 atggaaaatgttacatagacaccatttattctcatacacctttgtacacctcatgcattag 41824006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 33 - 85
Target Start/End: Original strand, 50526089 - 50526141
Alignment:
Q  33 ggaaaatgttacatagacaccttttaattgcatacacccttgtacaccccatg 85  Q
    ||||||||||||||| ||||| |||| ||  ||||||||||||||||||||||    
T  50526089 ggaaaatgttacataaacaccctttatttctatacacccttgtacaccccatg 50526141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 34 - 69
Target Start/End: Original strand, 8343092 - 8343127
Alignment:
Q  34 gaaaatgttacatagacaccttttaattgcatacac 69  Q
    |||||||||||||| |||||||||||||||||||||    
T  8343092 gaaaatgttacataaacaccttttaattgcatacac 8343127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 176 - 226
Target Start/End: Original strand, 480498 - 480548
Alignment:
Q  176 gggtgtcaaggggtgtatttccacctaagggtgtttatgtatcataactct 226  Q
    ||||||||| |||||||||  ||||||||||||| |||||||||| |||||    
T  480498 gggtgtcaaagggtgtattgtcacctaagggtgtctatgtatcattactct 480548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 121 - 171
Target Start/End: Original strand, 29589746 - 29589796
Alignment:
Q  121 tgtacttgtgcggggtccatatggtcacgtgtcagatttttgtgtgagtgt 171  Q
    |||||||||| ||||||||||||| ||| | ||||||||||||||| ||||    
T  29589746 tgtacttgtgtggggtccatatggccacatatcagatttttgtgtgggtgt 29589796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 37 - 91
Target Start/End: Complemental strand, 41236525 - 41236471
Alignment:
Q  37 aatgttacatagacaccttttaattgcatacacccttgtacaccccatgtattag 91  Q
    |||| |||||||||||| |||| |  ||||||||||||||||||||||| |||||    
T  41236525 aatgatacatagacaccctttattcccatacacccttgtacaccccatgcattag 41236471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 37 - 91
Target Start/End: Original strand, 42044289 - 42044343
Alignment:
Q  37 aatgttacatagacaccttttaattgcatacacccttgtacaccccatgtattag 91  Q
    |||| |||||||||||| |||| || |||||||||||||||| |||||| |||||    
T  42044289 aatgatacatagacaccctttatttccatacacccttgtacatcccatgcattag 42044343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 37 - 90
Target Start/End: Original strand, 48182971 - 48183024
Alignment:
Q  37 aatgttacatagacaccttttaattgcatacacccttgtacaccccatgtatta 90  Q
    |||| |||||||||||| |||| |  ||||||||||||||||||||||| ||||    
T  48182971 aatgatacatagacaccctttattctcatacacccttgtacaccccatgcatta 48183024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 186 - 226
Target Start/End: Original strand, 44536806 - 44536846
Alignment:
Q  186 gggtgtatttccacctaagggtgtttatgtatcataactct 226  Q
    ||||||||| ||||||||  |||||||||||||||||||||    
T  44536806 gggtgtattgccacctaaaagtgtttatgtatcataactct 44536846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 60; Significance: 2e-25; HSPs: 32)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 32 - 91
Target Start/End: Original strand, 32707920 - 32707979
Alignment:
Q  32 tggaaaatgttacatagacaccttttaattgcatacacccttgtacaccccatgtattag 91  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32707920 tggaaaatgttacatagacaccttttaattgcatacacccttgtacaccccatgtattag 32707979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 121 - 226
Target Start/End: Complemental strand, 16383471 - 16383376
Alignment:
Q  121 tgtacttgtgcggggtccatatggtcacgtgtcagatttttgtgtgagtgtattggggtgtcaaggggtgtatttccacctaagggtgtttatgtatcat 220  Q
    |||||||||||||||||||||||| ||| |||||||||||||||||          |||||||||||||||||| |||||||||||||||||||||||||    
T  16383471 tgtacttgtgcggggtccatatggccacatgtcagatttttgtgtg----------ggtgtcaaggggtgtattgccacctaagggtgtttatgtatcat 16383382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 36 - 91
Target Start/End: Original strand, 16056322 - 16056377
Alignment:
Q  36 aaatgttacatagacaccttttaattgcatacacccttgtacaccccatgtattag 91  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16056322 aaatgttacatagacaccttttaattgcatacacccttgtacaccccatgtattag 16056377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 32 - 91
Target Start/End: Complemental strand, 32032907 - 32032848
Alignment:
Q  32 tggaaaatgttacatagacaccttttaattgcatacacccttgtacaccccatgtattag 91  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  32032907 tggaaaatgttacatagacaccttttaattgcatacacccttgtacacctcatgtattag 32032848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 37 - 91
Target Start/End: Original strand, 24307715 - 24307769
Alignment:
Q  37 aatgttacatagacaccttttaattgcatacacccttgtacaccccatgtattag 91  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24307715 aatgttacatagacaccttttaattgcatacacccttgtacaccccatgtattag 24307769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 121 - 226
Target Start/End: Original strand, 24307799 - 24307894
Alignment:
Q  121 tgtacttgtgcggggtccatatggtcacgtgtcagatttttgtgtgagtgtattggggtgtcaaggggtgtatttccacctaagggtgtttatgtatcat 220  Q
    |||||||||||||||||||||||| ||| | |||||||||||||||          ||||||||||| |||||| |||||||||||||||||||||||||    
T  24307799 tgtacttgtgcggggtccatatggccacatatcagatttttgtgtg----------ggtgtcaagggatgtattgccacctaagggtgtttatgtatcat 24307888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 37 - 91
Target Start/End: Original strand, 30479396 - 30479450
Alignment:
Q  37 aatgttacatagacaccttttaattgcatacacccttgtacaccccatgtattag 91  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  30479396 aatgttacatagacaccttttaattgcatacacccttgtacacctcatgtattag 30479450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 121 - 226
Target Start/End: Complemental strand, 34307310 - 34307215
Alignment:
Q  121 tgtacttgtgcggggtccatatggtcacgtgtcagatttttgtgtgagtgtattggggtgtcaaggggtgtatttccacctaagggtgtttatgtatcat 220  Q
    |||||||||||||||| ||||||  ||| |||||||||||||||||          |||||||||||||||||| |||||||||||||||||||||||||    
T  34307310 tgtacttgtgcggggttcatatgtccacatgtcagatttttgtgtg----------ggtgtcaaggggtgtattgccacctaagggtgtttatgtatcat 34307221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 37 - 91
Target Start/End: Complemental strand, 34307394 - 34307340
Alignment:
Q  37 aatgttacatagacaccttttaattgcatacacccttgtacaccccatgtattag 91  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  34307394 aatgttacatagacaccttttaattgcatacacccttgtacaccccatatattag 34307340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 121 - 226
Target Start/End: Original strand, 16056407 - 16056502
Alignment:
Q  121 tgtacttgtgcggggtccatatggtcacgtgtcagatttttgtgtgagtgtattggggtgtcaaggggtgtatttccacctaagggtgtttatgtatcat 220  Q
    |||||||||||||||||||||||| ||| ||||||||||||||||          |||||||||||| ||||||  ||| ||||| ||||||||||||||    
T  16056407 tgtacttgtgcggggtccatatggccacatgtcagatttttgtgt----------gggtgtcaagggatgtattgtcacataaggatgtttatgtatcat 16056496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 35 - 78
Target Start/End: Complemental strand, 16384069 - 16384026
Alignment:
Q  35 aaaatgttacatagacaccttttaattgcatacacccttgtaca 78  Q
    ||||||||||||| ||||||||||||||||||||||||||||||    
T  16384069 aaaatgttacataaacaccttttaattgcatacacccttgtaca 16384026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 176 - 226
Target Start/End: Complemental strand, 24307678 - 24307628
Alignment:
Q  176 gggtgtcaaggggtgtatttccacctaagggtgtttatgtatcataactct 226  Q
    ||||||||| || |||||| |||||||||||||||||||||||||||||||    
T  24307678 gggtgtcaatggatgtattgccacctaagggtgtttatgtatcataactct 24307628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 179 - 225
Target Start/End: Original strand, 30479528 - 30479574
Alignment:
Q  179 tgtcaaggggtgtatttccacctaagggtgtttatgtatcataactc 225  Q
    |||||| ||||||||| ||||||||||||||||||||||||||||||    
T  30479528 tgtcaaagggtgtattgccacctaagggtgtttatgtatcataactc 30479574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 30 - 85
Target Start/End: Original strand, 8841347 - 8841402
Alignment:
Q  30 aatggaaaatgttacatagacaccttttaattgcatacacccttgtacaccccatg 85  Q
    |||||||||||||||||||||||| |||| |  ||||||| |||||||||||||||    
T  8841347 aatggaaaatgttacatagacaccatttattctcatacactcttgtacaccccatg 8841402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 36 - 91
Target Start/End: Original strand, 40423864 - 40423919
Alignment:
Q  36 aaatgttacatagacaccttttaattgcatacacccttgtacaccccatgtattag 91  Q
    ||||| ||||||||||||||||| |  |||||||||||||||||| ||||||||||    
T  40423864 aaatgatacatagacaccttttattcccatacacccttgtacacctcatgtattag 40423919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 33 - 84
Target Start/End: Original strand, 43414499 - 43414550
Alignment:
Q  33 ggaaaatgttacatagacaccttttaattgcatacacccttgtacaccccat 84  Q
    ||||||||||||||||||||| |||| |  ||||||||||||||||||||||    
T  43414499 ggaaaatgttacatagacaccctttattgccatacacccttgtacaccccat 43414550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 125 - 225
Target Start/End: Original strand, 15048192 - 15048281
Alignment:
Q  125 cttgtgcggggtccatatggtcacgtgtcagatttttgtgtgagtgtattggggtgtcaaggggtgtatttccacctaagggtgtttatgtatcataact 224  Q
    |||||||||||||||| |||  ||||||||||||||||||||           ||||||| ||||||||| |||||||||| ||| ||||||||||||||    
T  15048192 cttgtgcggggtccatgtggctacgtgtcagatttttgtgtg-----------gtgtcaaagggtgtattgccacctaaggatgtctatgtatcataact 15048280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 121 - 226
Target Start/End: Complemental strand, 32032818 - 32032724
Alignment:
Q  121 tgtacttgtgcggggtccatatggtcacgtgtcagatttttgtgtgagtgtattggggtgtcaaggggtgtatttccacctaagggtgtttatgtatcat 220  Q
    ||||||||||| || ||||||||| ||| |||||||||||||||||          | ||||||||  |||||| |||||||||||||||||||||||||    
T  32032818 tgtacttgtgcaggatccatatggccacatgtcagatttttgtgtg----------gatgtcaagga-tgtattgccacctaagggtgtttatgtatcat 32032730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 176 - 225
Target Start/End: Original strand, 1179991 - 1180040
Alignment:
Q  176 gggtgtcaaggggtgtatttccacctaagggtgtttatgtatcataactc 225  Q
    ||||||||| ||||||||| |||||||||||||| |||||||||| ||||    
T  1179991 gggtgtcaaagggtgtattaccacctaagggtgtctatgtatcattactc 1180040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 176 - 225
Target Start/End: Original strand, 34012347 - 34012396
Alignment:
Q  176 gggtgtcaaggggtgtatttccacctaagggtgtttatgtatcataactc 225  Q
    ||||||||| ||||||||| |||||||||||||| |||||||||| ||||    
T  34012347 gggtgtcaaagggtgtattaccacctaagggtgtctatgtatcattactc 34012396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 32 - 85
Target Start/End: Complemental strand, 37038662 - 37038609
Alignment:
Q  32 tggaaaatgttacatagacaccttttaattgcatacacccttgtacaccccatg 85  Q
    |||||||||||||||| ||||| |||| ||  ||||||||||||||||||||||    
T  37038662 tggaaaatgttacataaacaccctttatttctatacacccttgtacaccccatg 37038609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 33 - 85
Target Start/End: Original strand, 10284549 - 10284601
Alignment:
Q  33 ggaaaatgttacatagacaccttttaattgcatacacccttgtacaccccatg 85  Q
    |||||||||||||||||||||||||| |   ||||| ||||||||||||||||    
T  10284549 ggaaaatgttacatagacaccttttattcttatacaaccttgtacaccccatg 10284601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 33 - 85
Target Start/End: Original strand, 42354506 - 42354558
Alignment:
Q  33 ggaaaatgttacatagacaccttttaattgcatacacccttgtacaccccatg 85  Q
    ||||||||||||||||||||| |||| |  ||||||||||| |||||||||||    
T  42354506 ggaaaatgttacatagacaccatttattctcatacacccttctacaccccatg 42354558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 176 - 223
Target Start/End: Original strand, 10621138 - 10621185
Alignment:
Q  176 gggtgtcaaggggtgtatttccacctaagggtgtttatgtatcataac 223  Q
    ||||||||| ||||||||| |||||||||| ||| |||||||||||||    
T  10621138 gggtgtcaaagggtgtattaccacctaaggatgtctatgtatcataac 10621185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 37 - 91
Target Start/End: Original strand, 504043 - 504097
Alignment:
Q  37 aatgttacatagacaccttttaattgcatacacccttgtacaccccatgtattag 91  Q
    |||| |||||||||||| |||| |  ||||||||||||||||||||||| |||||    
T  504043 aatgatacatagacaccctttattctcatacacccttgtacaccccatgcattag 504097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 37 - 91
Target Start/End: Complemental strand, 12831225 - 12831171
Alignment:
Q  37 aatgttacatagacaccttttaattgcatacacccttgtacaccccatgtattag 91  Q
    |||| |||||||||||| |||| |  ||||||||||||||||||||||| |||||    
T  12831225 aatgatacatagacaccatttattctcatacacccttgtacaccccatgcattag 12831171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 37 - 91
Target Start/End: Original strand, 23122519 - 23122573
Alignment:
Q  37 aatgttacatagacaccttttaattgcatacacccttgtacaccccatgtattag 91  Q
    |||| |||||||||||| |||| |  ||||||||||||||||||||||| |||||    
T  23122519 aatgatacatagacaccctttattctcatacacccttgtacaccccatgcattag 23122573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 121 - 175
Target Start/End: Original strand, 32708011 - 32708065
Alignment:
Q  121 tgtacttgtgcggggtccatatggtcacgtgtcagatttttgtgtgagtgtattg 175  Q
    |||||||||||||||||||||| | ||| | |||||||||||| || ||||||||    
T  32708011 tgtacttgtgcggggtccatatagccacatctcagatttttgtatgggtgtattg 32708065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 176 - 225
Target Start/End: Original strand, 504172 - 504221
Alignment:
Q  176 gggtgtcaaggggtgtatttccacctaagggtgtttatgtatcataactc 225  Q
    |||||||||  |||||||| |||||||||||||| |||||||||| ||||    
T  504172 gggtgtcaaaaggtgtattgccacctaagggtgtctatgtatcattactc 504221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 176 - 225
Target Start/End: Complemental strand, 12831096 - 12831047
Alignment:
Q  176 gggtgtcaaggggtgtatttccacctaagggtgtttatgtatcataactc 225  Q
    ||||||||| |||||||||  ||||||||||||| |||||||||| ||||    
T  12831096 gggtgtcaaagggtgtattgtcacctaagggtgtctatgtatcattactc 12831047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 33 - 89
Target Start/End: Original strand, 30183794 - 30183850
Alignment:
Q  33 ggaaaatgttacatagacaccttttaattgcatacacccttgtacaccccatgtatt 89  Q
    ||||||||||| ||||||| | |||| || ||||||| |||||||||||||| ||||    
T  30183794 ggaaaatgttagatagacatcctttatttacatacactcttgtacaccccatatatt 30183850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 30 - 58
Target Start/End: Complemental strand, 40467885 - 40467857
Alignment:
Q  30 aatggaaaatgttacatagacacctttta 58  Q
    |||||||||||||||||||||||||||||    
T  40467885 aatggaaaatgttacatagacacctttta 40467857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 60; Significance: 2e-25; HSPs: 22)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 32 - 91
Target Start/End: Complemental strand, 4231731 - 4231672
Alignment:
Q  32 tggaaaatgttacatagacaccttttaattgcatacacccttgtacaccccatgtattag 91  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4231731 tggaaaatgttacatagacaccttttaattgcatacacccttgtacaccccatgtattag 4231672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 121 - 226
Target Start/End: Original strand, 15990048 - 15990143
Alignment:
Q  121 tgtacttgtgcggggtccatatggtcacgtgtcagatttttgtgtgagtgtattggggtgtcaaggggtgtatttccacctaagggtgtttatgtatcat 220  Q
    |||||||||||||||||||||||| ||| |||||||||||||||||          |||||||||||||||||| |||||||||||||||||||||||||    
T  15990048 tgtacttgtgcggggtccatatggccacatgtcagatttttgtgtg----------ggtgtcaaggggtgtattgccacctaagggtgtttatgtatcat 15990137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 121 - 226
Target Start/End: Original strand, 30341366 - 30341461
Alignment:
Q  121 tgtacttgtgcggggtccatatggtcacgtgtcagatttttgtgtgagtgtattggggtgtcaaggggtgtatttccacctaagggtgtttatgtatcat 220  Q
    |||||||||||||||||||||||| ||| |||||||||||||||||          |||||||||||||||||| |||||||||||||||||||||||||    
T  30341366 tgtacttgtgcggggtccatatggccacatgtcagatttttgtgtg----------ggtgtcaaggggtgtattgccacctaagggtgtttatgtatcat 30341455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 121 - 225
Target Start/End: Original strand, 15508030 - 15508124
Alignment:
Q  121 tgtacttgtgcggggtccatatggtcacgtgtcagatttttgtgtgagtgtattggggtgtcaaggggtgtatttccacctaagggtgtttatgtatcat 220  Q
    |||||||||||||||||||||||| ||| |||||||||||||||||          |||||||||||||||||| |||||||||||||||||||||||||    
T  15508030 tgtacttgtgcggggtccatatggccacatgtcagatttttgtgtg----------ggtgtcaaggggtgtattgccacctaagggtgtttatgtatcat 15508119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 32 - 91
Target Start/End: Original strand, 15989959 - 15990018
Alignment:
Q  32 tggaaaatgttacatagacaccttttaattgcatacacccttgtacaccccatgtattag 91  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  15989959 tggaaaatgttacatagacaccttttaattgcatacacccttgtacaccccatatattag 15990018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 33 - 91
Target Start/End: Original strand, 30341278 - 30341336
Alignment:
Q  33 ggaaaatgttacatagacaccttttaattgcatacacccttgtacaccccatgtattag 91  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  30341278 ggaaaatgttacatagacaccttttaattgcatacacccttgtacaccccatatattag 30341336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 33 - 91
Target Start/End: Original strand, 15507942 - 15508000
Alignment:
Q  33 ggaaaatgttacatagacaccttttaattgcatacacccttgtacaccccatgtattag 91  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||    
T  15507942 ggaaaatgttacatagacaccttttaattgcatacatccttgtacaccccatatattag 15508000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 121 - 225
Target Start/End: Complemental strand, 4231642 - 4231548
Alignment:
Q  121 tgtacttgtgcggggtccatatggtcacgtgtcagatttttgtgtgagtgtattggggtgtcaaggggtgtatttccacctaagggtgtttatgtatcat 220  Q
    |||||||||||||||||||||||| ||||||||||||||||||||          ||||| ||||||||||||| |||||||| | |||||||| |||||    
T  4231642 tgtacttgtgcggggtccatatggccacgtgtcagatttttgtgt----------gggtggcaaggggtgtattgccacctaatgatgtttatgaatcat 4231553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 37 - 91
Target Start/End: Complemental strand, 17598732 - 17598678
Alignment:
Q  37 aatgttacatagacaccttttaattgcatacacccttgtacaccccatgtattag 91  Q
    |||| ||||||||||||||||| || ||||||||||||||||||||||| |||||    
T  17598732 aatgatacatagacaccttttatttccatacacccttgtacaccccatgcattag 17598678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 31 - 84
Target Start/End: Complemental strand, 31976432 - 31976379
Alignment:
Q  31 atggaaaatgttacatagacaccttttaattgcatacacccttgtacaccccat 84  Q
    ||||||||||||||||||||||| |||| |  ||||||||||||||||||||||    
T  31976432 atggaaaatgttacatagacaccatttattctcatacacccttgtacaccccat 31976379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 176 - 220
Target Start/End: Original strand, 22880709 - 22880753
Alignment:
Q  176 gggtgtcaaggggtgtatttccacctaagggtgtttatgtatcat 220  Q
    ||||||||| ||||||||| |||||||||||||| ||||||||||    
T  22880709 gggtgtcaaagggtgtattgccacctaagggtgtctatgtatcat 22880753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 176 - 220
Target Start/End: Original strand, 28536537 - 28536581
Alignment:
Q  176 gggtgtcaaggggtgtatttccacctaagggtgtttatgtatcat 220  Q
    |||||||||||| |||||| |||||||||| ||||||||||||||    
T  28536537 gggtgtcaagggttgtattgccacctaaggatgtttatgtatcat 28536581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 178 - 226
Target Start/End: Original strand, 31110812 - 31110860
Alignment:
Q  178 gtgtcaaggggtgtatttccacctaagggtgtttatgtatcataactct 226  Q
    ||||||| ||||||||| |||||||||| ||| ||||||||||||||||    
T  31110812 gtgtcaaagggtgtattgccacctaaggatgtctatgtatcataactct 31110860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 32 - 79
Target Start/End: Original strand, 22421996 - 22422043
Alignment:
Q  32 tggaaaatgttacatagacaccttttaattgcatacacccttgtacac 79  Q
    |||||||||||||||||||||| |||| |  |||||||||||||||||    
T  22421996 tggaaaatgttacatagacaccatttattctcatacacccttgtacac 22422043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 33 - 84
Target Start/End: Original strand, 31110679 - 31110730
Alignment:
Q  33 ggaaaatgttacatagacaccttttaattgcatacacccttgtacaccccat 84  Q
    ||||||||||||||||||| | |||| || |||||||| |||||||||||||    
T  31110679 ggaaaatgttacatagacatcctttatttccatacacctttgtacaccccat 31110730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 37 - 91
Target Start/End: Complemental strand, 11427796 - 11427742
Alignment:
Q  37 aatgttacatagacaccttttaattgcatacacccttgtacaccccatgtattag 91  Q
    |||| |||||||||||| |||| |  ||||||||||||||||||||||| |||||    
T  11427796 aatgatacatagacaccctttattctcatacacccttgtacaccccatgcattag 11427742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 37 - 91
Target Start/End: Original strand, 22880580 - 22880634
Alignment:
Q  37 aatgttacatagacaccttttaattgcatacacccttgtacaccccatgtattag 91  Q
    |||| |||||| ||||| |||| |  |||||||||||||||||||||||||||||    
T  22880580 aatgatacatatacaccatttattcccatacacccttgtacaccccatgtattag 22880634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 35 - 85
Target Start/End: Original strand, 28536408 - 28536458
Alignment:
Q  35 aaaatgttacatagacaccttttaattgcatacacccttgtacaccccatg 85  Q
    |||||||||||| |||| | |||| || |||||||||||||||||||||||    
T  28536408 aaaatgttacatcgacatcatttattttcatacacccttgtacaccccatg 28536458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 37 - 91
Target Start/End: Complemental strand, 29858005 - 29857951
Alignment:
Q  37 aatgttacatagacaccttttaattgcatacacccttgtacaccccatgtattag 91  Q
    |||| |||||||||||| |||| |  ||||||||||||||||||||||| |||||    
T  29858005 aatgatacatagacaccatttattcccatacacccttgtacaccccatgcattag 29857951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 176 - 218
Target Start/End: Complemental strand, 32869727 - 32869685
Alignment:
Q  176 gggtgtcaaggggtgtatttccacctaagggtgtttatgtatc 218  Q
    ||||||||| ||||||||| |||||||||||||| ||||||||    
T  32869727 gggtgtcaaagggtgtattgccacctaagggtgtctatgtatc 32869685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 176 - 225
Target Start/End: Original strand, 31953081 - 31953130
Alignment:
Q  176 gggtgtcaaggggtgtatttccacctaagggtgtttatgtatcataactc 225  Q
    ||||||||||||||||||| |||||||||| ||| ||| |||||| ||||    
T  31953081 gggtgtcaaggggtgtattgccacctaaggatgtctatctatcattactc 31953130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 33 - 85
Target Start/End: Original strand, 31952948 - 31953000
Alignment:
Q  33 ggaaaatgttacatagacaccttttaattgcatacacccttgtacaccccatg 85  Q
    ||||||||||||||||||||| |||| |  |||||| |||| |||||||||||    
T  31952948 ggaaaatgttacatagacaccatttattctcatacatccttctacaccccatg 31953000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 59; Significance: 7e-25; HSPs: 22)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 121 - 226
Target Start/End: Original strand, 3921271 - 3921366
Alignment:
Q  121 tgtacttgtgcggggtccatatggtcacgtgtcagatttttgtgtgagtgtattggggtgtcaaggggtgtatttccacctaagggtgtttatgtatcat 220  Q
    |||||||||||||||||||||||| ||| |||||||||||||||||          |||||||||||||||||| |||||||||||||||||||||||||    
T  3921271 tgtacttgtgcggggtccatatggccacatgtcagatttttgtgtg----------ggtgtcaaggggtgtattgccacctaagggtgtttatgtatcat 3921360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 33 - 91
Target Start/End: Original strand, 2252086 - 2252144
Alignment:
Q  33 ggaaaatgttacatagacaccttttaattgcatacacccttgtacaccccatgtattag 91  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  2252086 ggaaaatgttacatagacaccttttaattgcatacacccttgtacaccccatatattag 2252144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 121 - 226
Target Start/End: Original strand, 2252174 - 2252269
Alignment:
Q  121 tgtacttgtgcggggtccatatggtcacgtgtcagatttttgtgtgagtgtattggggtgtcaaggggtgtatttccacctaagggtgtttatgtatcat 220  Q
    |||||||||||||||||||||||| ||| |||||||||||||||||          |||||||||||||||||| |||||||||| ||||||||||||||    
T  2252174 tgtacttgtgcggggtccatatggccacatgtcagatttttgtgtg----------ggtgtcaaggggtgtattgccacctaaggatgtttatgtatcat 2252263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 33 - 91
Target Start/End: Original strand, 3921183 - 3921241
Alignment:
Q  33 ggaaaatgttacatagacaccttttaattgcatacacccttgtacaccccatgtattag 91  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  3921183 ggaaaatgttacatagacaccttttaattgcatacacccttgtacaccccatatattag 3921241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 33 - 91
Target Start/End: Original strand, 39688815 - 39688873
Alignment:
Q  33 ggaaaatgttacatagacaccttttaattgcatacacccttgtacaccccatgtattag 91  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||    
T  39688815 ggaaaatgttacatagacaccttttaattgcatacacctttgtacaccctatgtattag 39688873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 37 - 91
Target Start/End: Complemental strand, 35785377 - 35785323
Alignment:
Q  37 aatgttacatagacaccttttaattgcatacacccttgtacaccccatgtattag 91  Q
    |||| ||||||||||||||||| || ||||||||||||||||||||||| |||||    
T  35785377 aatgatacatagacaccttttatttccatacacccttgtacaccccatgcattag 35785323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 35 - 85
Target Start/End: Original strand, 35943812 - 35943862
Alignment:
Q  35 aaaatgttacatagacaccttttaattgcatacacccttgtacaccccatg 85  Q
    |||||||||||||||||| ||||| || |||||||||||||||||||||||    
T  35943812 aaaatgttacatagacacattttatttccatacacccttgtacaccccatg 35943862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 176 - 226
Target Start/End: Original strand, 39688948 - 39688998
Alignment:
Q  176 gggtgtcaaggggtgtatttccacctaagggtgtttatgtatcataactct 226  Q
    |||||||||||| |||||| |||| ||||||||||||||||||||||||||    
T  39688948 gggtgtcaagggatgtattgccacttaagggtgtttatgtatcataactct 39688998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 126 - 225
Target Start/End: Complemental strand, 28177864 - 28177775
Alignment:
Q  126 ttgtgcggggtccatatggtcacgtgtcagatttttgtgtgagtgtattggggtgtcaaggggtgtatttccacctaagggtgtttatgtatcataactc 225  Q
    ||||||||||||||| ||  |||||||||||||||||||||          |||||||| ||||||||| |||||||||| ||| |||||||||||||||    
T  28177864 ttgtgcggggtccatgtgaccacgtgtcagatttttgtgtg----------ggtgtcaaagggtgtattgccacctaaggatgtctatgtatcataactc 28177775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 33 - 84
Target Start/End: Original strand, 15409528 - 15409579
Alignment:
Q  33 ggaaaatgttacatagacaccttttaattgcatacacccttgtacaccccat 84  Q
    ||||||||||||||| ||||| |||| | |||||||||||||||||||||||    
T  15409528 ggaaaatgttacataaacaccctttattcgcatacacccttgtacaccccat 15409579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 176 - 225
Target Start/End: Original strand, 33149689 - 33149738
Alignment:
Q  176 gggtgtcaaggggtgtatttccacctaagggtgtttatgtatcataactc 225  Q
    ||||||||| ||||||||| |||||||||||||| |||||||||| ||||    
T  33149689 gggtgtcaaagggtgtattaccacctaagggtgtctatgtatcattactc 33149738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 176 - 220
Target Start/End: Original strand, 18520935 - 18520979
Alignment:
Q  176 gggtgtcaaggggtgtatttccacctaagggtgtttatgtatcat 220  Q
    ||||||||| ||||||||| |||||||||||||| ||||||||||    
T  18520935 gggtgtcaaagggtgtattgccacctaagggtgtctatgtatcat 18520979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 33 - 85
Target Start/End: Complemental strand, 31009170 - 31009118
Alignment:
Q  33 ggaaaatgttacatagacaccttttaattgcatacacccttgtacaccccatg 85  Q
    ||||||||||||||||||||| |||| |  |||||||| ||||||||||||||    
T  31009170 ggaaaatgttacatagacaccctttattctcatacacctttgtacaccccatg 31009118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 176 - 220
Target Start/End: Original strand, 36875654 - 36875698
Alignment:
Q  176 gggtgtcaaggggtgtatttccacctaagggtgtttatgtatcat 220  Q
    ||||||||| ||||||||| |||||||||||||| ||||||||||    
T  36875654 gggtgtcaaagggtgtattgccacctaagggtgtctatgtatcat 36875698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 125 - 171
Target Start/End: Original strand, 15409620 - 15409666
Alignment:
Q  125 cttgtgcggggtccatatggtcacgtgtcagatttttgtgtgagtgt 171  Q
    |||||||||||||||| |||  |||||||||||||||||||| ||||    
T  15409620 cttgtgcggggtccatgtggctacgtgtcagatttttgtgtgggtgt 15409666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 37 - 91
Target Start/End: Original strand, 18520806 - 18520860
Alignment:
Q  37 aatgttacatagacaccttttaattgcatacacccttgtacaccccatgtattag 91  Q
    |||| |||||||||||| |||| || |||||||||||||||||| |||| |||||    
T  18520806 aatgatacatagacaccctttattttcatacacccttgtacacctcatgcattag 18520860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 176 - 226
Target Start/End: Original strand, 36732993 - 36733043
Alignment:
Q  176 gggtgtcaaggggtgtatttccacctaagggtgtttatgtatcataactct 226  Q
    ||||||||| ||||||||| | |||||||||||| |||||||||| |||||    
T  36732993 gggtgtcaaagggtgtattgctacctaagggtgtctatgtatcattactct 36733043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 126 - 171
Target Start/End: Complemental strand, 6679787 - 6679742
Alignment:
Q  126 ttgtgcggggtccatatggtcacgtgtcagatttttgtgtgagtgt 171  Q
    ||||||||||||||| ||  ||||||||||||||||||||| ||||    
T  6679787 ttgtgcggggtccatgtgaccacgtgtcagatttttgtgtgggtgt 6679742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 176 - 225
Target Start/End: Complemental strand, 35785248 - 35785199
Alignment:
Q  176 gggtgtcaaggggtgtatttccacctaagggtgtttatgtatcataactc 225  Q
    |||||||||  |||||||| |||||||||||||| |||||||||| ||||    
T  35785248 gggtgtcaaaaggtgtattgccacctaagggtgtctatgtatcattactc 35785199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 176 - 225
Target Start/End: Original strand, 35943943 - 35943992
Alignment:
Q  176 gggtgtcaaggggtgtatttccacctaagggtgtttatgtatcataactc 225  Q
    |||||||||  | |||||| |||||||||||||| |||||||||||||||    
T  35943943 gggtgtcaaatgatgtattgccacctaagggtgtctatgtatcataactc 35943992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 177 - 225
Target Start/End: Complemental strand, 26720564 - 26720516
Alignment:
Q  177 ggtgtcaaggggtgtatttccacctaagggtgtttatgtatcataactc 225  Q
    ||||| || ||||||||| |||||||||| ||| |||||||||||||||    
T  26720564 ggtgttaaagggtgtattgccacctaaggatgtctatgtatcataactc 26720516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 177 - 225
Target Start/End: Complemental strand, 26990313 - 26990265
Alignment:
Q  177 ggtgtcaaggggtgtatttccacctaagggtgtttatgtatcataactc 225  Q
    ||||| || ||||||||| |||||||||| ||| |||||||||||||||    
T  26990313 ggtgttaaagggtgtattgccacctaaggatgtctatgtatcataactc 26990265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 58; Significance: 3e-24; HSPs: 23)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 121 - 225
Target Start/End: Original strand, 50591006 - 50591100
Alignment:
Q  121 tgtacttgtgcggggtccatatggtcacgtgtcagatttttgtgtgagtgtattggggtgtcaaggggtgtatttccacctaagggtgtttatgtatcat 220  Q
    |||||||||||||||||||||||| ||| |||||||||||||||||          |||||||||||||||||| |||||||||||||||||||||||||    
T  50591006 tgtacttgtgcggggtccatatggccacatgtcagatttttgtgtg----------ggtgtcaaggggtgtattgccacctaagggtgtttatgtatcat 50591095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 31 - 91
Target Start/End: Original strand, 50590916 - 50590976
Alignment:
Q  31 atggaaaatgttacatagacaccttttaattgcatacacccttgtacaccccatgtattag 91  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  50590916 atggaaaatgttacatagataccttttaattgcatacacccttgtacaccccatgtattag 50590976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 33 - 91
Target Start/End: Original strand, 5958918 - 5958976
Alignment:
Q  33 ggaaaatgttacatagacaccttttaattgcatacacccttgtacaccccatgtattag 91  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  5958918 ggaaaatgttacatagacacattttaattgcatacacccttgtacaccccatgtattag 5958976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 33 - 91
Target Start/End: Complemental strand, 47748624 - 47748566
Alignment:
Q  33 ggaaaatgttacatagacaccttttaattgcatacacccttgtacaccccatgtattag 91  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  47748624 ggaaaatgttacatagacaccttttaattgcatacactcttgtacaccccatgtattag 47748566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 30 - 91
Target Start/End: Original strand, 41608408 - 41608469
Alignment:
Q  30 aatggaaaatgttacatagacaccttttaattgcatacacccttgtacaccccatgtattag 91  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||    
T  41608408 aatggaaaatgttacataaacaccttttaattgcatacacccttgtacaccctatgtattag 41608469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 121 - 225
Target Start/End: Original strand, 41608499 - 41608593
Alignment:
Q  121 tgtacttgtgcggggtccatatggtcacgtgtcagatttttgtgtgagtgtattggggtgtcaaggggtgtatttccacctaagggtgtttatgtatcat 220  Q
    ||||||||| |||||||||||||| ||| ||||||||||||||||||||||          ||||||||||||| |||||||||| ||||||||||||||    
T  41608499 tgtacttgtacggggtccatatggccacatgtcagatttttgtgtgagtgt----------caaggggtgtattgccacctaaggatgtttatgtatcat 41608588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 31 - 91
Target Start/End: Original strand, 44332287 - 44332347
Alignment:
Q  31 atggaaaatgttacatagacaccttttaattgcatacacccttgtacaccccatgtattag 91  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||| | |||||||||    
T  44332287 atggaaaatgttacatagataccttttaattgcatacacccttgtacactctatgtattag 44332347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 121 - 226
Target Start/End: Original strand, 5959006 - 5959101
Alignment:
Q  121 tgtacttgtgcggggtccatatggtcacgtgtcagatttttgtgtgagtgtattggggtgtcaaggggtgtatttccacctaagggtgtttatgtatcat 220  Q
    |||||||||||||||||||||||  ||| |||||||||||||||||          ||||||||| |||||||| |||| ||||||||||||||||||||    
T  5959006 tgtacttgtgcggggtccatatgaccacatgtcagatttttgtgtg----------ggtgtcaagaggtgtattgccacttaagggtgtttatgtatcat 5959095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 176 - 225
Target Start/End: Complemental strand, 3000368 - 3000319
Alignment:
Q  176 gggtgtcaaggggtgtatttccacctaagggtgtttatgtatcataactc 225  Q
    ||||||||| ||||||||| ||||||||||||||||||||||||| ||||    
T  3000368 gggtgtcaaagggtgtattgccacctaagggtgtttatgtatcattactc 3000319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 31 - 84
Target Start/End: Complemental strand, 32813431 - 32813378
Alignment:
Q  31 atggaaaatgttacatagacaccttttaattgcatacacccttgtacaccccat 84  Q
    ||||||||||||||||||||||| |||| |  ||||||||||||||||||||||    
T  32813431 atggaaaatgttacatagacaccatttattcccatacacccttgtacaccccat 32813378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 176 - 226
Target Start/End: Complemental strand, 2581964 - 2581914
Alignment:
Q  176 gggtgtcaaggggtgtatttccacctaagggtgtttatgtatcataactct 226  Q
    ||||||||| ||||||||| |||||||||||||| |||||||||| |||||    
T  2581964 gggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactct 2581914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 125 - 226
Target Start/End: Complemental strand, 32813337 - 32813246
Alignment:
Q  125 cttgtgcggggtccatatggtcacgtgtcagatttttgtgtgagtgtattggggtgtcaaggggtgtatttccacctaagggtgtttatgtatcataact 224  Q
    |||||||||||||||| ||  |||||||||||||||||||||          ||||| || ||||||||| |||||||||| ||| ||||||||||||||    
T  32813337 cttgtgcggggtccatgtgaccacgtgtcagatttttgtgtg----------ggtgttaaagggtgtattgccacctaaggatgtctatgtatcataact 32813248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 176 - 226
Target Start/End: Complemental strand, 38595203 - 38595153
Alignment:
Q  176 gggtgtcaaggggtgtatttccacctaagggtgtttatgtatcataactct 226  Q
    ||||||||| ||||||||| |||||||| |||||||||||||||| |||||    
T  38595203 gggtgtcaaagggtgtattgccacctaaaggtgtttatgtatcattactct 38595153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 176 - 225
Target Start/End: Original strand, 9474927 - 9474976
Alignment:
Q  176 gggtgtcaaggggtgtatttccacctaagggtgtttatgtatcataactc 225  Q
    ||||||||| ||||||||| |||||||||||||| |||||||||| ||||    
T  9474927 gggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactc 9474976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 176 - 225
Target Start/End: Original strand, 47452371 - 47452420
Alignment:
Q  176 gggtgtcaaggggtgtatttccacctaagggtgtttatgtatcataactc 225  Q
    ||||||||| ||||||||| |||||||||||||| |||||||||| ||||    
T  47452371 gggtgtcaaagggtgtattaccacctaagggtgtctatgtatcattactc 47452420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 176 - 225
Target Start/End: Complemental strand, 47748491 - 47748443
Alignment:
Q  176 gggtgtcaaggggtgtatttccacctaagggtgtttatgtatcataactc 225  Q
    |||||||||||| |||||| |||||||||||| |||||||||||||||||    
T  47748491 gggtgtcaaggg-tgtattgccacctaagggtatttatgtatcataactc 47748443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 32 - 85
Target Start/End: Original strand, 51898600 - 51898653
Alignment:
Q  32 tggaaaatgttacatagacaccttttaattgcatacacccttgtacaccccatg 85  Q
    |||||||||||||||| ||||| |||| ||  ||||||||||||||||||||||    
T  51898600 tggaaaatgttacataaacaccctttatttctatacacccttgtacaccccatg 51898653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 37 - 91
Target Start/End: Original strand, 27564657 - 27564711
Alignment:
Q  37 aatgttacatagacaccttttaattgcatacacccttgtacaccccatgtattag 91  Q
    |||| |||||||||||| |||| |  ||||||||||||||||||||||| |||||    
T  27564657 aatgatacatagacaccctttattcccatacacccttgtacaccccatgcattag 27564711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 37 - 91
Target Start/End: Complemental strand, 37649376 - 37649322
Alignment:
Q  37 aatgttacatagacaccttttaattgcatacacccttgtacaccccatgtattag 91  Q
    |||| |||||||||||| |||| |  ||||||||||||||||||||||| |||||    
T  37649376 aatgatacatagacaccctttattcccatacacccttgtacaccccatgcattag 37649322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 37 - 91
Target Start/End: Complemental strand, 41758983 - 41758929
Alignment:
Q  37 aatgttacatagacaccttttaattgcatacacccttgtacaccccatgtattag 91  Q
    |||| |||||||||||| |||| |  ||||||||||||||||||||||| |||||    
T  41758983 aatgatacatagacaccctttattctcatacacccttgtacaccccatgcattag 41758929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 37 - 91
Target Start/End: Original strand, 48716204 - 48716258
Alignment:
Q  37 aatgttacatagacaccttttaattgcatacacccttgtacaccccatgtattag 91  Q
    |||| |||||||||||| |||| |  ||||||||||||||||||||||| |||||    
T  48716204 aatgatacatagacaccctttattcccatacacccttgtacaccccatgcattag 48716258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 32 - 81
Target Start/End: Complemental strand, 6261053 - 6261004
Alignment:
Q  32 tggaaaatgttacatagacaccttttaattgcatacacccttgtacaccc 81  Q
    |||||||||||||||| ||||| |||| || |||||||| ||||||||||    
T  6261053 tggaaaatgttacatacacaccatttattttcatacacctttgtacaccc 6261004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 123 - 171
Target Start/End: Original strand, 44332379 - 44332427
Alignment:
Q  123 tacttgtgcggggtccatatggtcacgtgtcagatttttgtgtgagtgt 171  Q
    ||||||||||||||||||| || ||| |||||||||||| |||| ||||    
T  44332379 tacttgtgcggggtccatagggccacatgtcagatttttatgtgggtgt 44332427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 56; Significance: 4e-23; HSPs: 37)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 32 - 91
Target Start/End: Complemental strand, 43490304 - 43490245
Alignment:
Q  32 tggaaaatgttacatagacaccttttaattgcatacacccttgtacaccccatgtattag 91  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  43490304 tggaaaatgttacatagacaccttttaattgcatacacccttgtacaccctatgtattag 43490245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 33 - 91
Target Start/End: Complemental strand, 13365535 - 13365477
Alignment:
Q  33 ggaaaatgttacatagacaccttttaattgcatacacccttgtacaccccatgtattag 91  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  13365535 ggaaaatgttacatagacaccttttaattgcattcacccttgtacaccccatgtattag 13365477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 121 - 225
Target Start/End: Complemental strand, 43490215 - 43490121
Alignment:
Q  121 tgtacttgtgcggggtccatatggtcacgtgtcagatttttgtgtgagtgtattggggtgtcaaggggtgtatttccacctaagggtgtttatgtatcat 220  Q
    |||||||||||||||||||||||| ||| |||||||||||||||||          ||||||||||||||||||  ||||||||||||||||||||||||    
T  43490215 tgtacttgtgcggggtccatatggccacatgtcagatttttgtgtg----------ggtgtcaaggggtgtattgtcacctaagggtgtttatgtatcat 43490126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 36 - 91
Target Start/End: Original strand, 2997408 - 2997463
Alignment:
Q  36 aaatgttacatagacaccttttaattgcatacacccttgtacaccccatgtattag 91  Q
    ||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||    
T  2997408 aaatgttacatagacactttttaattgcatacacccttgtacacctcatgtattag 2997463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 32 - 91
Target Start/End: Original strand, 3034900 - 3034959
Alignment:
Q  32 tggaaaatgttacatagacaccttttaattgcatacacccttgtacaccccatgtattag 91  Q
    ||||||||||||||||||||||||||||||||||||||| | ||||||| ||||||||||    
T  3034900 tggaaaatgttacatagacaccttttaattgcatacaccttggtacacctcatgtattag 3034959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 33 - 91
Target Start/End: Complemental strand, 38732536 - 38732478
Alignment:
Q  33 ggaaaatgttacatagacaccttttaattgcatacacccttgtacaccccatgtattag 91  Q
    |||||||||||||||||||||||||||||||||||| ||||||||| | ||||||||||    
T  38732536 ggaaaatgttacatagacaccttttaattgcatacatccttgtacatctcatgtattag 38732478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 121 - 226
Target Start/End: Original strand, 45097741 - 45097836
Alignment:
Q  121 tgtacttgtgcggggtccatatggtcacgtgtcagatttttgtgtgagtgtattggggtgtcaaggggtgtatttccacctaagggtgtttatgtatcat 220  Q
    |||||||||||||||||||||||| ||| |||||||||||||| ||          ||||||||||| |||||| |||||||||| ||||||||||||||    
T  45097741 tgtacttgtgcggggtccatatggccacatgtcagatttttgtatg----------ggtgtcaagggatgtattgccacctaaggatgtttatgtatcat 45097830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 121 - 226
Target Start/End: Complemental strand, 13365447 - 13365350
Alignment:
Q  121 tgtacttgtgcggggtccatatggtcacgtgtcagatttttgtgtgagtgtattggggtgtcaaggggtgtatttccacctaagg--gtgtttatgtatc 218  Q
    |||||||||||||||||||||||||||| ||||||||||||||||          |||||||||||||| |||| ||| ||||||  |||||||||||||    
T  13365447 tgtacttgtgcggggtccatatggtcacatgtcagatttttgtgt----------gggtgtcaaggggtatattgccatctaagggtgtgtttatgtatc 13365358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 121 - 225
Target Start/End: Complemental strand, 38732448 - 38732354
Alignment:
Q  121 tgtacttgtgcggggtccatatggtcacgtgtcagatttttgtgtgagtgtattggggtgtcaaggggtgtatttccacctaagggtgtttatgtatcat 220  Q
    |||||||||||||||||||||||  ||| ||||||||||||||||          |||||||||||| ||||||  ||| ||||||||||||||||||||    
T  38732448 tgtacttgtgcggggtccatatgaccacatgtcagatttttgtgt----------gggtgtcaagggatgtattgtcacataagggtgtttatgtatcat 38732359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 125 - 225
Target Start/End: Original strand, 40613912 - 40614002
Alignment:
Q  125 cttgtgcggggtccatatggtcacgtgtcagatttttgtgtgagtgtattggggtgtcaaggggtgtatttccacctaagggtgtttatgtatcataact 224  Q
    |||||||||||||||| ||| ||||||||||||||||||||          ||||||||| ||||||||| |||||||||| ||| ||||||||||||||    
T  40613912 cttgtgcggggtccatgtggccacgtgtcagatttttgtgt----------gggtgtcaaagggtgtattgccacctaaggatgtctatgtatcataact 40614001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 29 - 85
Target Start/End: Complemental strand, 20701001 - 20700945
Alignment:
Q  29 gaatggaaaatgttacatagacaccttttaattgcatacacccttgtacaccccatg 85  Q
    ||||||||||||||||||||||||| |||| |  |||||||||||||||||||||||    
T  20701001 gaatggaaaatgttacatagacaccctttattcccatacacccttgtacaccccatg 20700945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 121 - 207
Target Start/End: Original strand, 2997493 - 2997569
Alignment:
Q  121 tgtacttgtgcggggtccatatggtcacgtgtcagatttttgtgtgagtgtattggggtgtcaaggggtgtatttccacctaagggt 207  Q
    |||||||||||||||||||||||| ||| ||||||||||||||||          ||||||||||||||||||| ||||||||||||    
T  2997493 tgtacttgtgcggggtccatatggccacatgtcagatttttgtgt----------gggtgtcaaggggtgtattgccacctaagggt 2997569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 33 - 91
Target Start/End: Original strand, 45097653 - 45097711
Alignment:
Q  33 ggaaaatgttacatagacaccttttaattgcatacacccttgtacaccccatgtattag 91  Q
    ||||||||||||||| ||| ||||||||||||||||| |||||||| || |||||||||    
T  45097653 ggaaaatgttacataaacatcttttaattgcatacactcttgtacatccgatgtattag 45097711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 33 - 89
Target Start/End: Complemental strand, 17823970 - 17823914
Alignment:
Q  33 ggaaaatgttacatagacaccttttaattgcatacacccttgtacaccccatgtatt 89  Q
    ||||||||||||||||||| | |||| || |||||||||||||||||||||| ||||    
T  17823970 ggaaaatgttacatagacatcctttatttacatacacccttgtacaccccatatatt 17823914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 33 - 84
Target Start/End: Original strand, 40613820 - 40613871
Alignment:
Q  33 ggaaaatgttacatagacaccttttaattgcatacacccttgtacaccccat 84  Q
    ||||||||||||||||||||| |||| |  ||||||||||||||||||||||    
T  40613820 ggaaaatgttacatagacaccctttattcccatacacccttgtacaccccat 40613871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 176 - 226
Target Start/End: Complemental strand, 9058529 - 9058479
Alignment:
Q  176 gggtgtcaaggggtgtatttccacctaagggtgtttatgtatcataactct 226  Q
    ||||||||| ||||||||| |||||||||||||| |||||||||| |||||    
T  9058529 gggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactct 9058479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 176 - 226
Target Start/End: Original strand, 26891555 - 26891605
Alignment:
Q  176 gggtgtcaaggggtgtatttccacctaagggtgtttatgtatcataactct 226  Q
    ||||||| ||||||||||| |||||||||||||  ||||||||||||||||    
T  26891555 gggtgtctaggggtgtattgccacctaagggtggctatgtatcataactct 26891605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 176 - 226
Target Start/End: Original strand, 33436151 - 33436201
Alignment:
Q  176 gggtgtcaaggggtgtatttccacctaagggtgtttatgtatcataactct 226  Q
    ||||||||| ||||||||| |||||||||||||| |||||||||| |||||    
T  33436151 gggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactct 33436201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 37 - 91
Target Start/End: Complemental strand, 40701656 - 40701602
Alignment:
Q  37 aatgttacatagacaccttttaattgcatacacccttgtacaccccatgtattag 91  Q
    |||| ||||||||||||||||| || ||||||||||||||||||| ||| |||||    
T  40701656 aatgatacatagacaccttttatttccatacacccttgtacacccgatgcattag 40701602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 33 - 81
Target Start/End: Complemental strand, 3440161 - 3440113
Alignment:
Q  33 ggaaaatgttacatagacaccttttaattgcatacacccttgtacaccc 81  Q
    ||||||||||||||||||||| |||| || |||||||| ||||||||||    
T  3440161 ggaaaatgttacatagacaccctttatttccatacacctttgtacaccc 3440113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 29 - 81
Target Start/End: Complemental strand, 3738129 - 3738077
Alignment:
Q  29 gaatggaaaatgttacatagacaccttttaattgcatacacccttgtacaccc 81  Q
    ||||||||||||||||||||||||| | || || |||||||| ||||||||||    
T  3738129 gaatggaaaatgttacatagacaccctatattttcatacacctttgtacaccc 3738077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 176 - 220
Target Start/End: Complemental strand, 28863504 - 28863460
Alignment:
Q  176 gggtgtcaaggggtgtatttccacctaagggtgtttatgtatcat 220  Q
    ||||||||| ||||||||| |||||||||||||| ||||||||||    
T  28863504 gggtgtcaaagggtgtattgccacctaagggtgtctatgtatcat 28863460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 35 - 91
Target Start/End: Complemental strand, 41758767 - 41758711
Alignment:
Q  35 aaaatgttacatagacaccttttaattgcatacacccttgtacaccccatgtattag 91  Q
    |||||||||||||||||| ||||| |  |||||| ||||||||||||||| ||||||    
T  41758767 aaaatgttacatagacacattttattctcatacatccttgtacaccccatatattag 41758711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 123 - 165
Target Start/End: Original strand, 3034991 - 3035033
Alignment:
Q  123 tacttgtgcggggtccatatggtcacgtgtcagatttttgtgt 165  Q
    |||||||||||||||||||||  ||| ||||||||||||||||    
T  3034991 tacttgtgcggggtccatatgaccacatgtcagatttttgtgt 3035033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 37 - 91
Target Start/End: Complemental strand, 4060863 - 4060809
Alignment:
Q  37 aatgttacatagacaccttttaattgcatacacccttgtacaccccatgtattag 91  Q
    |||| |||||| ||| |||||| || ||||||||||||||||||||||| |||||    
T  4060863 aatgatacataaacatcttttatttccatacacccttgtacaccccatgcattag 4060809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 37 - 91
Target Start/End: Original strand, 10249304 - 10249358
Alignment:
Q  37 aatgttacatagacaccttttaattgcatacacccttgtacaccccatgtattag 91  Q
    |||| |||||||||||| |||| |  ||||||||||||||||||||||| |||||    
T  10249304 aatgatacatagacaccctttattctcatacacccttgtacaccccatgcattag 10249358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 37 - 91
Target Start/End: Original strand, 19930742 - 19930796
Alignment:
Q  37 aatgttacatagacaccttttaattgcatacacccttgtacaccccatgtattag 91  Q
    |||| ||||||||||||||||| |  |||||||||||||||||| |||| |||||    
T  19930742 aatgatacatagacaccttttattcccatacacccttgtacacctcatgcattag 19930796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 180 - 226
Target Start/End: Complemental strand, 30915508 - 30915462
Alignment:
Q  180 gtcaaggggtgtatttccacctaagggtgtttatgtatcataactct 226  Q
    ||||| ||||||||| |||||||||||||| |||||||||| |||||    
T  30915508 gtcaaagggtgtattgccacctaagggtgtctatgtatcattactct 30915462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 37 - 91
Target Start/End: Complemental strand, 30915641 - 30915587
Alignment:
Q  37 aatgttacatagacaccttttaattgcatacacccttgtacaccccatgtattag 91  Q
    |||| |||||||||| |  ||| || |||||||||||||||||||||||||||||    
T  30915641 aatgatacatagacatccattatttccatacacccttgtacaccccatgtattag 30915587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 125 - 171
Target Start/End: Complemental strand, 42257283 - 42257237
Alignment:
Q  125 cttgtgcggggtccatatggtcacgtgtcagatttttgtgtgagtgt 171  Q
    |||||||||||||||| ||| |||||||||||||||| |||| ||||    
T  42257283 cttgtgcggggtccatgtggccacgtgtcagatttttatgtgggtgt 42257237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 34 - 76
Target Start/End: Complemental strand, 44152108 - 44152066
Alignment:
Q  34 gaaaatgttacatagacaccttttaattgcatacacccttgta 76  Q
    |||||||||||||| |||||||||| | |||||||||||||||    
T  44152108 gaaaatgttacataaacaccttttattcgcatacacccttgta 44152066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 176 - 225
Target Start/End: Original strand, 17820055 - 17820104
Alignment:
Q  176 gggtgtcaaggggtgtatttccacctaagggtgtttatgtatcataactc 225  Q
    ||||||||||||||||||| |||||||  | ||| |||||||||||||||    
T  17820055 gggtgtcaaggggtgtattgccacctatagttgtctatgtatcataactc 17820104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 179 - 220
Target Start/End: Original strand, 19930874 - 19930915
Alignment:
Q  179 tgtcaaggggtgtatttccacctaagggtgtttatgtatcat 220  Q
    |||||| ||||||||| |||||||||||||| ||||||||||    
T  19930874 tgtcaaagggtgtattgccacctaagggtgtctatgtatcat 19930915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 125 - 166
Target Start/End: Complemental strand, 36168926 - 36168885
Alignment:
Q  125 cttgtgcggggtccatatggtcacgtgtcagatttttgtgtg 166  Q
    |||||||||||||||| ||| ||||||||| |||||||||||    
T  36168926 cttgtgcggggtccatgtggccacgtgtcaaatttttgtgtg 36168885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 31 - 84
Target Start/End: Complemental strand, 36169020 - 36168967
Alignment:
Q  31 atggaaaatgttacatagacaccttttaattgcatacacccttgtacaccccat 84  Q
    ||||||||||||||||| ||||| |||| |  ||||||| ||||||||||||||    
T  36169020 atggaaaatgttacataaacaccctttattctcatacactcttgtacaccccat 36168967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 176 - 225
Target Start/End: Complemental strand, 40701527 - 40701478
Alignment:
Q  176 gggtgtcaaggggtgtatttccacctaagggtgtttatgtatcataactc 225  Q
    |||||||||  |||||||| |||||||||||||| |||||||||| ||||    
T  40701527 gggtgtcaaaaggtgtattgccacctaagggtgtctatgtatcattactc 40701478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 178 - 226
Target Start/End: Original strand, 15428793 - 15428841
Alignment:
Q  178 gtgtcaaggggtgtatttccacctaagggtgtttatgtatcataactct 226  Q
    |||| |||||||||||  |||| ||||| ||||||||||||||||||||    
T  15428793 gtgttaaggggtgtatggccacataaggatgtttatgtatcataactct 15428841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 55; Significance: 2e-22; HSPs: 33)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 33 - 91
Target Start/End: Complemental strand, 42823293 - 42823235
Alignment:
Q  33 ggaaaatgttacatagacaccttttaattgcatacacccttgtacaccccatgtattag 91  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  42823293 ggaaaatgttacatagacaccttttaattgcatacacccttgtacacctcatgtattag 42823235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 33 - 91
Target Start/End: Original strand, 45058471 - 45058529
Alignment:
Q  33 ggaaaatgttacatagacaccttttaattgcatacacccttgtacaccccatgtattag 91  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  45058471 ggaaaatgttacatagacaccttttaattgcatacaccattgtacaccccatgtattag 45058529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 33 - 91
Target Start/End: Original strand, 36331247 - 36331305
Alignment:
Q  33 ggaaaatgttacatagacaccttttaattgcatacacccttgtacaccccatgtattag 91  Q
    ||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||    
T  36331247 ggaaaatgttacatatacatcttttaattgcatacacccttgtacaccccatgtattag 36331305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 123 - 225
Target Start/End: Original strand, 45058561 - 45058652
Alignment:
Q  123 tacttgtgcggggtccatatggtcacgtgtcagatttttgtgtgagtgtattggggtgtcaaggggtgtatttccacctaagggtgtttatgtatcataa 222  Q
    |||||||||||||||||||||||||| |||||||||||| ||||          ||||||||||| |||||| |||||||||||||||||||||||||||    
T  45058561 tacttgtgcggggtccatatggtcacatgtcagatttttatgtg----------ggtgtcaaggg-tgtattgccacctaagggtgtttatgtatcataa 45058649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 33 - 87
Target Start/End: Original strand, 30801651 - 30801705
Alignment:
Q  33 ggaaaatgttacatagacaccttttaattgcatacacccttgtacaccccatgta 87  Q
    |||||||||||||||||||||||||| |  |||||||||||||||||||||||||    
T  30801651 ggaaaatgttacatagacaccttttattctcatacacccttgtacaccccatgta 30801705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 33 - 84
Target Start/End: Original strand, 51419278 - 51419329
Alignment:
Q  33 ggaaaatgttacatagacaccttttaattgcatacacccttgtacaccccat 84  Q
    ||||||||||||||| |||||||||| || ||||||||||||||||||||||    
T  51419278 ggaaaatgttacataaacaccttttatttccatacacccttgtacaccccat 51419329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 121 - 171
Target Start/End: Original strand, 36331335 - 36331385
Alignment:
Q  121 tgtacttgtgcggggtccatatggtcacgtgtcagatttttgtgtgagtgt 171  Q
    |||||||||||||||||||||||| ||| ||||||||||||||||| ||||    
T  36331335 tgtacttgtgcggggtccatatggccacatgtcagatttttgtgtgggtgt 36331385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 33 - 90
Target Start/End: Original strand, 35965700 - 35965757
Alignment:
Q  33 ggaaaatgttacatagacaccttttaattgcatacacccttgtacaccccatgtatta 90  Q
    |||||||||||||||||||||||||| |  |||||||||||||||||| |||| ||||    
T  35965700 ggaaaatgttacatagacaccttttattctcatacacccttgtacacctcatgaatta 35965757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 33 - 85
Target Start/End: Original strand, 33118768 - 33118820
Alignment:
Q  33 ggaaaatgttacatagacaccttttaattgcatacacccttgtacaccccatg 85  Q
    |||||||||||| |||||||| |||| || |||||||||||||||||||||||    
T  33118768 ggaaaatgttacgtagacaccctttatttccatacacccttgtacaccccatg 33118820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 33 - 84
Target Start/End: Original strand, 20764833 - 20764884
Alignment:
Q  33 ggaaaatgttacatagacaccttttaattgcatacacccttgtacaccccat 84  Q
    ||||||||||||||||||||| |||| |  ||||||||||||||||||||||    
T  20764833 ggaaaatgttacatagacaccatttattctcatacacccttgtacaccccat 20764884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 33 - 84
Target Start/End: Original strand, 26141448 - 26141499
Alignment:
Q  33 ggaaaatgttacatagacaccttttaattgcatacacccttgtacaccccat 84  Q
    ||||||||||||||||||||| |||| || ||||||| ||||||||||||||    
T  26141448 ggaaaatgttacatagacaccctttatttccatacactcttgtacaccccat 26141499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 179 - 226
Target Start/End: Original strand, 36331432 - 36331479
Alignment:
Q  179 tgtcaaggggtgtatttccacctaagggtgtttatgtatcataactct 226  Q
    |||||||||||| ||| ||| |||||||||||||||||||||||||||    
T  36331432 tgtcaaggggtgcattgccatctaagggtgtttatgtatcataactct 36331479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 176 - 226
Target Start/End: Original strand, 11095404 - 11095454
Alignment:
Q  176 gggtgtcaaggggtgtatttccacctaagggtgtttatgtatcataactct 226  Q
    ||||||||| ||||||||| |||||||||||||| |||||||||| |||||    
T  11095404 gggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactct 11095454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 125 - 171
Target Start/End: Complemental strand, 11907461 - 11907415
Alignment:
Q  125 cttgtgcggggtccatatggtcacgtgtcagatttttgtgtgagtgt 171  Q
    |||||||||||||||||||  ||| ||||||||||||||||||||||    
T  11907461 cttgtgcggggtccatatgaccacatgtcagatttttgtgtgagtgt 11907415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 176 - 226
Target Start/End: Original strand, 33118902 - 33118952
Alignment:
Q  176 gggtgtcaaggggtgtatttccacctaagggtgtttatgtatcataactct 226  Q
    ||||||||| |||||||||  ||||||||||||| ||||||||||||||||    
T  33118902 gggtgtcaaagggtgtattgtcacctaagggtgtctatgtatcataactct 33118952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 176 - 222
Target Start/End: Complemental strand, 42823160 - 42823114
Alignment:
Q  176 gggtgtcaaggggtgtatttccacctaagggtgtttatgtatcataa 222  Q
    ||||||||||||||||||| |||| ||| ||||||||||||||||||    
T  42823160 gggtgtcaaggggtgtattaccacataatggtgtttatgtatcataa 42823114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 176 - 226
Target Start/End: Complemental strand, 49607463 - 49607413
Alignment:
Q  176 gggtgtcaaggggtgtatttccacctaagggtgtttatgtatcataactct 226  Q
    ||||||||| ||||||||| |||||||||||||| |||||||||| |||||    
T  49607463 gggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactct 49607413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 37 - 91
Target Start/End: Original strand, 54868817 - 54868871
Alignment:
Q  37 aatgttacatagacaccttttaattgcatacacccttgtacaccccatgtattag 91  Q
    |||| ||||||||||||||||| || ||||||||||||||||||| ||| |||||    
T  54868817 aatgatacatagacaccttttatttccatacacccttgtacaccctatgcattag 54868871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 176 - 225
Target Start/End: Complemental strand, 8076442 - 8076393
Alignment:
Q  176 gggtgtcaaggggtgtatttccacctaagggtgtttatgtatcataactc 225  Q
    ||||||||| ||||||| | ||||||||||||||||||||||||| ||||    
T  8076442 gggtgtcaaagggtgtactgccacctaagggtgtttatgtatcattactc 8076393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 176 - 225
Target Start/End: Original strand, 14623890 - 14623939
Alignment:
Q  176 gggtgtcaaggggtgtatttccacctaagggtgtttatgtatcataactc 225  Q
    ||||||||||||||||||| |||||||||| ||| |||||||||| ||||    
T  14623890 gggtgtcaaggggtgtattgccacctaaggatgtctatgtatcattactc 14623939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 176 - 221
Target Start/End: Complemental strand, 52629349 - 52629304
Alignment:
Q  176 gggtgtcaaggggtgtatttccacctaagggtgtttatgtatcata 221  Q
    ||||||||| ||||||||| |||||||||||||| |||||||||||    
T  52629349 gggtgtcaaagggtgtattgccacctaagggtgtctatgtatcata 52629304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 176 - 225
Target Start/End: Complemental strand, 53982060 - 53982011
Alignment:
Q  176 gggtgtcaaggggtgtatttccacctaagggtgtttatgtatcataactc 225  Q
    ||||||||| ||||||||| |||||||||||||| |||||||||| ||||    
T  53982060 gggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactc 53982011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 176 - 220
Target Start/End: Original strand, 13898106 - 13898150
Alignment:
Q  176 gggtgtcaaggggtgtatttccacctaagggtgtttatgtatcat 220  Q
    ||||||||||||||||||| |||||||||| ||||||| ||||||    
T  13898106 gggtgtcaaggggtgtattgccacctaaggatgtttatctatcat 13898150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 33 - 85
Target Start/End: Complemental strand, 35536808 - 35536756
Alignment:
Q  33 ggaaaatgttacatagacaccttttaattgcatacacccttgtacaccccatg 85  Q
    ||||||||||||||||||||| |||| |  ||||||||||| |||||||||||    
T  35536808 ggaaaatgttacatagacaccatttattctcatacacccttctacaccccatg 35536756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 33 - 84
Target Start/End: Original strand, 41189682 - 41189733
Alignment:
Q  33 ggaaaatgttacatagacaccttttaattgcatacacccttgtacaccccat 84  Q
    ||||||||||||||||||||| |||| || ||||||| ||||||||| ||||    
T  41189682 ggaaaatgttacatagacaccctttatttccatacactcttgtacactccat 41189733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 296 - 362
Target Start/End: Complemental strand, 1028628 - 1028562
Alignment:
Q  296 acacttgcttcctaaccttcatgtgcagcaaaataatgatttttgaatcatgctttgacattaaaac 362  Q
    ||||||||||||||||  |||||||||||||| ||| || |||| ||| | |||| |||||||||||    
T  1028628 acacttgcttcctaactctcatgtgcagcaaagtaacgaattttaaattacgcttcgacattaaaac 1028562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 125 - 171
Target Start/End: Original strand, 20764925 - 20764971
Alignment:
Q  125 cttgtgcggggtccatatggtcacgtgtcagatttttgtgtgagtgt 171  Q
    ||||| |||||||||| ||| ||||||||||||||||||||| ||||    
T  20764925 cttgtacggggtccatgtggccacgtgtcagatttttgtgtgggtgt 20764971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 125 - 171
Target Start/End: Original strand, 51419370 - 51419416
Alignment:
Q  125 cttgtgcggggtccatatggtcacgtgtcagatttttgtgtgagtgt 171  Q
    ||||||||||||| || ||| ||||||||||||||||||||| ||||    
T  51419370 cttgtgcggggtctatgtggccacgtgtcagatttttgtgtgggtgt 51419416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 176 - 226
Target Start/End: Original strand, 54868946 - 54868996
Alignment:
Q  176 gggtgtcaaggggtgtatttccacctaagggtgtttatgtatcataactct 226  Q
    |||||||||  |||||||| |||||||||||||| |||||||||| |||||    
T  54868946 gggtgtcaaaaggtgtattgccacctaagggtgtctatgtatcattactct 54868996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 176 - 225
Target Start/End: Original strand, 26141583 - 26141632
Alignment:
Q  176 gggtgtcaaggggtgtatttccacctaagggtgtttatgtatcataactc 225  Q
    |||||| || ||||||||| |||||||||| ||| |||||||||||||||    
T  26141583 gggtgttaaagggtgtattgccacctaaggatgtctatgtatcataactc 26141632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 125 - 166
Target Start/End: Complemental strand, 47531955 - 47531914
Alignment:
Q  125 cttgtgcggggtccatatggtcacgtgtcagatttttgtgtg 166  Q
    |||||||||||| ||||||| ||||||||||||| |||||||    
T  47531955 cttgtgcggggttcatatggccacgtgtcagattcttgtgtg 47531914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 33 - 85
Target Start/End: Complemental strand, 8076575 - 8076523
Alignment:
Q  33 ggaaaatgttacatagacaccttttaattgcatacacccttgtacaccccatg 85  Q
    ||||||||||||||||||||| |||| |  |||||||  ||||||||||||||    
T  8076575 ggaaaatgttacatagacaccatttattctcatacacttttgtacaccccatg 8076523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 33 - 81
Target Start/End: Complemental strand, 26754877 - 26754829
Alignment:
Q  33 ggaaaatgttacatagacaccttttaattgcatacacccttgtacaccc 81  Q
    ||||||||||||||||||||  |||| || |||||||| ||||||||||    
T  26754877 ggaaaatgttacatagacactctttatttccatacacctttgtacaccc 26754829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 54; Significance: 6e-22; HSPs: 2)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 34 - 91
Target Start/End: Complemental strand, 152679 - 152622
Alignment:
Q  34 gaaaatgttacatagacaccttttaattgcatacacccttgtacaccccatgtattag 91  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  152679 gaaaatgttacatagacaccttttaattgcatacacccttgtacatcccatgtattag 152622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 176 - 212
Target Start/End: Complemental strand, 152547 - 152511
Alignment:
Q  176 gggtgtcaaggggtgtatttccacctaagggtgttta 212  Q
    ||||||||||||||||||| ||||| |||||||||||    
T  152547 gggtgtcaaggggtgtattgccacccaagggtgttta 152511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 33 - 91
Target Start/End: Original strand, 8781 - 8839
Alignment:
Q  33 ggaaaatgttacatagacaccttttaattgcatacacccttgtacaccccatgtattag 91  Q
    |||||||||||||||||||||||||| |   ||||||||||||||||||||| ||||||    
T  8781 ggaaaatgttacatagacaccttttattcttatacacccttgtacaccccatatattag 8839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0316 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0316
Description:

Target: scaffold0316; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 33 - 80
Target Start/End: Complemental strand, 17285 - 17238
Alignment:
Q  33 ggaaaatgttacatagacaccttttaattgcatacacccttgtacacc 80  Q
    ||||||||||||||||||||| |||| || |||||||| |||||||||    
T  17285 ggaaaatgttacatagacaccctttatttccatacacctttgtacacc 17238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0237 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0237
Description:

Target: scaffold0237; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 37 - 91
Target Start/End: Complemental strand, 4207 - 4153
Alignment:
Q  37 aatgttacatagacaccttttaattgcatacacccttgtacaccccatgtattag 91  Q
    |||| |||||||||||| |||| |  ||||||||||||||||||||||| |||||    
T  4207 aatgatacatagacaccatttattcccatacacccttgtacaccccatgcattag 4153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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