View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19267_high_34 (Length: 357)
Name: NF19267_high_34
Description: NF19267
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19267_high_34 |
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Alignment Details
Target: chr4 (Bit Score: 320; Significance: 1e-180; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 320; E-Value: 1e-180
Query Start/End: Original strand, 9 - 336
Target Start/End: Original strand, 41090563 - 41090890
Alignment:
| Q |
9 |
gagatgaataggttgatagaaacaaaaagtgctgatgagaaaagtagcacaaagagaaaatcaagaagagttggacgtgaaaagagaaagtaaagagatg |
108 |
Q |
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| T |
41090563 |
gagaagaataggttgatagaaacaaaaagtgctgatgagaaaagtagcacaaagagaaaatcaagaagagttggacgtgaaaagagaaagtaaagagatg |
41090662 |
T |
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| Q |
109 |
ttaaagatacgaagatgatgaaatgaaaacgtgtgagaagcttgaaagattgaaactttgaggtaaagggtattgtaaaagaaggtttgttttgatgggt |
208 |
Q |
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| T |
41090663 |
ttaaagatacgaagatgatgaaatgaaaacgtgtgagaagcttgaaagattgaaactttgaggtaaagggtattgtaaaagaaggtttgttttgatgggt |
41090762 |
T |
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| Q |
209 |
tttgttgtgtgtaggtgtttgagatggtgatgatggagtgttgcttgagaagcgttgttcatggtgaaaatgatgaggagaaggtgaagaaaaaggtgta |
308 |
Q |
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| T |
41090763 |
tttgttgtgtgtaggtgtttgagaaggtgatgatggagtgttgcttgagaagcgttgttcatggtgaaaatgatgaggagaaggtgaagaaaaaggtgta |
41090862 |
T |
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| Q |
309 |
acttggattgagaaatgggtgaaatcgg |
336 |
Q |
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| T |
41090863 |
acttggattgagaaatgggtgaaatcgg |
41090890 |
T |
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