View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19267_high_74 (Length: 227)
Name: NF19267_high_74
Description: NF19267
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19267_high_74 |
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Alignment Details
Target: chr4 (Bit Score: 176; Significance: 6e-95; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 176; E-Value: 6e-95
Query Start/End: Original strand, 17 - 211
Target Start/End: Complemental strand, 20520346 - 20520154
Alignment:
| Q |
17 |
atgaacagaaacaataacagaagctttatctttggataatcttctagcacttttcaagtgaaaaagtgtttaatcttctagcaaattttgtttccattga |
116 |
Q |
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| T |
20520346 |
atgaacagaaacaataacagaagctttatcttttgataatcttctagcacttttcaagtgaaaaagtgtttaatcttctagcaaattttgtttccattga |
20520247 |
T |
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| Q |
117 |
tcaactcgattaatccttcaaacactgttgtgattagttcctaattactagtaggaaagagttaagaaggctacatgataagcatcaaagaacaa |
211 |
Q |
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||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |
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| T |
20520246 |
tcaactcgattaatccttcaaacac--ttgtgattagttcctaattactagtagcaaagagttaagaaggctacatgataagcatcaaagaacaa |
20520154 |
T |
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