View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19267_high_78 (Length: 213)
Name: NF19267_high_78
Description: NF19267
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19267_high_78 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 194; Significance: 1e-105; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 8 - 213
Target Start/End: Complemental strand, 28267954 - 28267749
Alignment:
| Q |
8 |
gacatcatcaagtgaaaaagaaaatacctagatcctcaatatttggaattgttgctgataaagcaaggaagcggacctgagccagaggatttaatttcat |
107 |
Q |
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| T |
28267954 |
gacaacatcaagtgaaaaagaaaatacctagatcctcaatatttggaattgttgctgataaagcgaggaagcggacctgagccagaggatttaatttcat |
28267855 |
T |
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| Q |
108 |
ttttggattgcaagaaataatttttattctgctaacaattgcttccagcacagctccacgtggatcattcagcagatggacttcatcaattagtagaagt |
207 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
28267854 |
ttttggattgcaagaaataatttttattctgctaacaattgcttccagcgcagctccacgtggatcattcagcagatggacttcatcaattagtagaagt |
28267755 |
T |
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| Q |
208 |
gctatg |
213 |
Q |
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|||||| |
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| T |
28267754 |
gctatg |
28267749 |
T |
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