View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19267_low_51 (Length: 288)
Name: NF19267_low_51
Description: NF19267
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19267_low_51 |
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Alignment Details
Target: chr4 (Bit Score: 231; Significance: 1e-127; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 231; E-Value: 1e-127
Query Start/End: Original strand, 17 - 274
Target Start/End: Original strand, 24866202 - 24866466
Alignment:
| Q |
17 |
taggcagttgaagtttgatatgactgagctgagcattatacaaatctttgcgggatagtcgtttaaacatatttaaagtgctgtaaattagttataactt |
116 |
Q |
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| T |
24866202 |
taggctgttgaagtttgatatgactgagctgagcattatacaaatctttgcgggatagtcgtttaaacatatttaaagttctgtaaattagttataactt |
24866301 |
T |
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| Q |
117 |
ctatgtatacgaaatatacacttgaaccatattttggtga-------ttttaattttagcgaatagcacactgttcaggtccaccttgataacactgcac |
209 |
Q |
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| T |
24866302 |
ctatgtatacgaaatatacacttgaaccatattttggtgattttaatttttaattttagcgaatagcacactgttcaggtccaccttgataacactgcac |
24866401 |
T |
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| Q |
210 |
taacatacccattgcaattgcatcagattttggttttaacgagtttaagattacatattgtttat |
274 |
Q |
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| T |
24866402 |
taacatacccattgcaattgcatcagattttggttttaacgagtttaagattacatattgtttat |
24866466 |
T |
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