View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19267_low_84 (Length: 205)
Name: NF19267_low_84
Description: NF19267
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19267_low_84 |
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Alignment Details
Target: chr6 (Bit Score: 165; Significance: 2e-88; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 165; E-Value: 2e-88
Query Start/End: Original strand, 19 - 191
Target Start/End: Original strand, 2382953 - 2383124
Alignment:
| Q |
19 |
ttgttgaagctcaagattgtagcttctgctaaaatcgtggtagcgaccatgattccgctaaattcactgtcaattcatacatgctgtatcatttcaatga |
118 |
Q |
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| T |
2382953 |
ttgttgaagctcaagattgtagcttctgctaaaatcgtggtagcgaccatgattccgctaaattcactgtcaattcatacatgctgtatcatttcaatga |
2383052 |
T |
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| Q |
119 |
atgacactttgagttatcatttcaattcatacatgttaatttggacatgaaatcgttccgatatagctctctg |
191 |
Q |
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|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2383053 |
atgacactttgagtta-catttcaattcatacatgttaatttggacatgaaatcgttccgatatagctctctg |
2383124 |
T |
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