View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19269_low_12 (Length: 257)
Name: NF19269_low_12
Description: NF19269
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19269_low_12 |
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Alignment Details
Target: chr3 (Bit Score: 221; Significance: 1e-122; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 221; E-Value: 1e-122
Query Start/End: Original strand, 11 - 239
Target Start/End: Complemental strand, 51680007 - 51679780
Alignment:
| Q |
11 |
cacagagaaataacaaatgcttacaaacgagtcttaaaagcaaaaactaagtcataaaataatatgtactatatagttgccaaatatctaccatatacaa |
110 |
Q |
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| T |
51680007 |
cacagagaaataacaaatgcttacaaacgagtcttaaaagcaaaaac-aagtcataaaataatatgtactatatagttgccaaatatctaccatatacaa |
51679909 |
T |
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| Q |
111 |
ggtgagaggcaacattgctaagagatagagagacaaaaattaattaattaatatatacttggagtatttatttattccaaaataaataaatatggttgat |
210 |
Q |
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| T |
51679908 |
ggtgagaggcaacattgctaagagatagagagacaaaaattaattaattaatatatacttggagtatttatttattccaaaataaataaatatggttgat |
51679809 |
T |
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| Q |
211 |
ccaattttgagtgaattaagggttgaaaa |
239 |
Q |
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| T |
51679808 |
ccaattttgagtgaattaagggttgaaaa |
51679780 |
T |
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