View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19269_low_2 (Length: 613)

Name: NF19269_low_2
Description: NF19269
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19269_low_2
NF19269_low_2
[»] chr3 (37 HSPs)
chr3 (343-600)||(35289137-35289394)
chr3 (18-343)||(38379261-38379621)
chr3 (108-174)||(3457291-3457357)
chr3 (108-174)||(39610576-39610642)
chr3 (108-184)||(2148109-2148186)
chr3 (108-184)||(40883558-40883635)
chr3 (108-184)||(41868016-41868093)
chr3 (16-100)||(33605035-33605119)
chr3 (126-174)||(48212720-48212768)
chr3 (126-184)||(13701685-13701744)
chr3 (126-184)||(32080446-32080505)
chr3 (16-75)||(32408633-32408692)
chr3 (126-184)||(55455249-55455308)
chr3 (127-184)||(4817563-4817621)
chr3 (109-163)||(11225703-11225757)
chr3 (128-173)||(2522774-2522819)
chr3 (108-184)||(54238702-54238779)
chr3 (109-184)||(2192448-2192524)
chr3 (126-174)||(32408579-32408627)
chr3 (126-184)||(14585849-14585908)
chr3 (126-184)||(30155973-30156032)
chr3 (108-175)||(31550279-31550346)
chr3 (126-184)||(38530311-38530370)
chr3 (126-184)||(55090382-55090441)
chr3 (108-174)||(25084378-25084444)
chr3 (108-174)||(31270678-31270744)
chr3 (108-174)||(44984559-44984625)
chr3 (128-174)||(53155124-53155170)
chr3 (108-184)||(105731-105807)
chr3 (108-184)||(1074577-1074654)
chr3 (27-76)||(11225605-11225654)
chr3 (108-184)||(31462438-31462515)
chr3 (108-184)||(33637763-33637840)
chr3 (122-162)||(550563-550603)
chr3 (126-174)||(25111863-25111911)
chr3 (134-174)||(25970461-25970501)
chr3 (34-106)||(44984641-44984713)
[»] chr4 (37 HSPs)
chr4 (16-106)||(31994276-31994366)
chr4 (108-184)||(27091077-27091154)
chr4 (108-184)||(8517134-8517211)
chr4 (126-184)||(626234-626293)
chr4 (126-184)||(42197940-42197999)
chr4 (108-184)||(28837424-28837501)
chr4 (11-106)||(6082207-6082302)
chr4 (126-184)||(7060701-7060760)
chr4 (108-171)||(56062343-56062406)
chr4 (108-185)||(56172182-56172260)
chr4 (108-184)||(393949-394026)
chr4 (108-184)||(6912049-6912126)
chr4 (108-184)||(24611473-24611550)
chr4 (13-106)||(31932507-31932600)
chr4 (108-184)||(31932616-31932693)
chr4 (108-184)||(45350745-45350822)
chr4 (108-184)||(45360224-45360301)
chr4 (11-76)||(46829650-46829715)
chr4 (16-76)||(18995534-18995594)
chr4 (145-184)||(29266579-29266619)
chr4 (109-184)||(56236506-56236582)
chr4 (126-184)||(3159349-3159408)
chr4 (126-184)||(6882331-6882390)
chr4 (130-184)||(41837705-41837760)
chr4 (128-174)||(477707-477753)
chr4 (108-174)||(18502528-18502594)
chr4 (16-106)||(24789437-24789527)
chr4 (16-106)||(24818732-24818822)
chr4 (128-184)||(3171299-3171356)
chr4 (127-183)||(7860885-7860942)
chr4 (128-161)||(9255011-9255044)
chr4 (108-184)||(24568390-24568467)
chr4 (108-184)||(31522315-31522392)
chr4 (128-184)||(32616534-32616591)
chr4 (108-184)||(38943832-38943909)
chr4 (148-183)||(23926429-23926465)
chr4 (108-183)||(36124033-36124109)
[»] scaffold0155 (1 HSPs)
scaffold0155 (108-184)||(35444-35521)
[»] chr6 (19 HSPs)
chr6 (108-184)||(2488491-2488568)
chr6 (128-174)||(31395624-31395670)
chr6 (108-184)||(4394139-4394216)
chr6 (128-184)||(6295924-6295981)
chr6 (128-184)||(6302734-6302791)
chr6 (108-184)||(19402527-19402604)
chr6 (108-184)||(30813426-30813503)
chr6 (108-174)||(31705534-31705600)
chr6 (108-184)||(12653993-12654070)
chr6 (108-184)||(14782830-14782907)
chr6 (108-157)||(35039045-35039094)
chr6 (108-184)||(35219588-35219665)
chr6 (126-184)||(15589800-15589859)
chr6 (108-174)||(8978442-8978508)
chr6 (108-184)||(8693346-8693423)
chr6 (128-184)||(12481054-12481111)
chr6 (34-106)||(15176072-15176144)
chr6 (126-162)||(20028414-20028450)
chr6 (129-184)||(23654639-23654695)
[»] chr5 (27 HSPs)
chr5 (13-106)||(14535143-14535236)
chr5 (109-174)||(35275750-35275815)
chr5 (128-174)||(7151185-7151231)
chr5 (108-184)||(2555025-2555102)
chr5 (108-184)||(6635617-6635694)
chr5 (108-184)||(17095916-17095993)
chr5 (108-184)||(18654151-18654228)
chr5 (108-184)||(34431433-34431510)
chr5 (109-161)||(12215488-12215540)
chr5 (126-184)||(3740719-3740778)
chr5 (16-107)||(17523304-17523395)
chr5 (31-106)||(39532117-39532192)
chr5 (108-174)||(6681563-6681629)
chr5 (108-185)||(42781370-42781448)
chr5 (108-184)||(6281413-6281490)
chr5 (108-184)||(11734520-11734597)
chr5 (108-184)||(17331697-17331774)
chr5 (108-184)||(32309865-32309942)
chr5 (126-184)||(28041016-28041075)
chr5 (108-174)||(6012747-6012813)
chr5 (128-174)||(11647573-11647619)
chr5 (108-174)||(26293979-26294045)
chr5 (108-184)||(177779-177856)
chr5 (129-174)||(374637-374682)
chr5 (121-174)||(5169210-5169263)
chr5 (109-174)||(39558189-39558254)
chr5 (129-173)||(33164156-33164200)
[»] chr1 (25 HSPs)
chr1 (109-184)||(25032778-25032854)
chr1 (126-183)||(14265670-14265728)
chr1 (108-185)||(28677813-28677891)
chr1 (108-184)||(33938719-33938796)
chr1 (108-183)||(42276724-42276800)
chr1 (127-184)||(27535085-27535143)
chr1 (129-163)||(30678629-30678663)
chr1 (108-184)||(13488211-13488288)
chr1 (128-184)||(32784468-32784525)
chr1 (128-184)||(33486711-33486768)
chr1 (130-174)||(10188576-10188620)
chr1 (129-184)||(25689528-25689584)
chr1 (111-171)||(32879065-32879125)
chr1 (108-163)||(11877159-11877214)
chr1 (127-185)||(12537907-12537966)
chr1 (126-184)||(12871993-12872052)
chr1 (127-185)||(15790950-15791009)
chr1 (111-174)||(29938572-29938635)
chr1 (108-162)||(15312325-15312379)
chr1 (108-174)||(29551451-29551517)
chr1 (128-184)||(10304952-10305009)
chr1 (129-174)||(16141001-16141046)
chr1 (126-174)||(15390938-15390986)
chr1 (108-160)||(38783421-38783473)
chr1 (108-183)||(45750847-45750923)
[»] chr7 (32 HSPs)
chr7 (16-106)||(31724868-31724958)
chr7 (16-85)||(10624046-10624115)
chr7 (126-184)||(3266761-3266820)
chr7 (108-173)||(38273258-38273323)
chr7 (108-184)||(39532650-39532727)
chr7 (126-184)||(31254806-31254865)
chr7 (126-184)||(36253317-36253376)
chr7 (108-185)||(28664630-28664708)
chr7 (108-173)||(5238303-5238368)
chr7 (109-174)||(7765564-7765629)
chr7 (108-184)||(9137310-9137387)
chr7 (108-184)||(10094809-10094886)
chr7 (108-184)||(21991031-21991108)
chr7 (28-105)||(37714739-37714816)
chr7 (108-184)||(41288325-41288402)
chr7 (38-106)||(6646377-6646445)
chr7 (127-163)||(38338880-38338916)
chr7 (126-184)||(4621055-4621114)
chr7 (126-184)||(6667782-6667841)
chr7 (126-184)||(22747184-22747243)
chr7 (108-166)||(33902021-33902080)
chr7 (108-185)||(1280811-1280889)
chr7 (128-184)||(8180190-8180247)
chr7 (129-170)||(10624172-10624213)
chr7 (108-184)||(11833387-11833464)
chr7 (126-171)||(14657610-14657655)
chr7 (108-184)||(21603827-21603904)
chr7 (109-166)||(22493335-22493392)
chr7 (108-184)||(42603454-42603531)
chr7 (108-184)||(45457231-45457308)
chr7 (108-183)||(36579017-36579093)
chr7 (108-168)||(37714833-37714893)
[»] chr2 (30 HSPs)
chr2 (108-184)||(28261580-28261657)
chr2 (108-184)||(41797964-41798040)
chr2 (127-184)||(29543181-29543239)
chr2 (16-85)||(2763325-2763394)
chr2 (16-85)||(11580934-11581003)
chr2 (108-184)||(33012417-33012494)
chr2 (108-184)||(44589241-44589318)
chr2 (27-106)||(17792732-17792811)
chr2 (126-184)||(28230772-28230831)
chr2 (108-173)||(4703500-4703565)
chr2 (108-184)||(4739698-4739775)
chr2 (108-184)||(12890792-12890869)
chr2 (108-184)||(20560808-20560885)
chr2 (108-184)||(25068210-25068287)
chr2 (128-184)||(35333894-35333951)
chr2 (129-184)||(7071450-7071506)
chr2 (126-185)||(17267800-17267860)
chr2 (108-184)||(5754651-5754728)
chr2 (108-184)||(10286689-10286766)
chr2 (108-157)||(11561390-11561439)
chr2 (128-184)||(12705075-12705132)
chr2 (108-184)||(13878684-13878761)
chr2 (108-184)||(14018809-14018886)
chr2 (136-184)||(17792854-17792903)
chr2 (108-184)||(18089087-18089164)
chr2 (108-169)||(20570327-20570388)
chr2 (108-184)||(27096058-27096135)
chr2 (32-85)||(27665814-27665867)
chr2 (19-76)||(28228473-28228530)
chr2 (126-174)||(11937552-11937600)
[»] chr8 (22 HSPs)
chr8 (108-174)||(13575903-13575969)
chr8 (108-185)||(32778654-32778732)
chr8 (108-184)||(28296798-28296875)
chr8 (108-184)||(37613005-37613082)
chr8 (108-166)||(21471915-21471973)
chr8 (127-184)||(24210628-24210686)
chr8 (127-184)||(31407434-31407492)
chr8 (108-184)||(4757517-4757594)
chr8 (108-184)||(30026565-30026642)
chr8 (133-184)||(2968909-2968961)
chr8 (27-75)||(42261191-42261239)
chr8 (126-184)||(2234153-2234212)
chr8 (128-159)||(41431305-41431336)
chr8 (128-174)||(4928302-4928348)
chr8 (127-184)||(9501956-9502014)
chr8 (128-174)||(13570461-13570507)
chr8 (145-174)||(9627835-9627864)
chr8 (127-183)||(9802044-9802101)
chr8 (129-184)||(10334866-10334922)
chr8 (126-174)||(14600392-14600440)
chr8 (126-174)||(24700222-24700270)
chr8 (12-76)||(26046414-26046478)
[»] scaffold0321 (1 HSPs)
scaffold0321 (108-183)||(6806-6882)
[»] scaffold0300 (1 HSPs)
scaffold0300 (113-171)||(10458-10515)
[»] scaffold0294 (1 HSPs)
scaffold0294 (108-184)||(3742-3819)
[»] scaffold0202 (1 HSPs)
scaffold0202 (108-171)||(22335-22398)
[»] scaffold0001 (1 HSPs)
scaffold0001 (108-174)||(403934-404000)
[»] scaffold0056 (1 HSPs)
scaffold0056 (109-174)||(74534-74599)


Alignment Details
Target: chr3 (Bit Score: 254; Significance: 1e-141; HSPs: 37)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 254; E-Value: 1e-141
Query Start/End: Original strand, 343 - 600
Target Start/End: Complemental strand, 35289394 - 35289137
Alignment:
Q  343 aacatattccactgaacagattcatatatcactgagactacagatattgagggacttaatagtcctctgcatttatgaatgtcattttttatacactgac 442  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35289394 aacatattccactgaacagattcatatatcactgagactacagatattgagggacttaatagtcctctgcatttatgaatgtcattttttatacactgac 35289295  T
Q  443 cacaatcaattattgagggaatacaaatatttcaaagattcagcagccattctggggttacatagaagttgaaattcaataattatatccaactcttact 542  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35289294 cacaatcaattattgagggaatacaaatatttcaaagattcagcagccattctggggttacatagaagttgaaattcaataattatatccaactcttact 35289195  T
Q  543 ggtgctatgctagtatgcatgcttgttttttggttgagaatgaactatggtgattgtg 600  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  35289194 ggtgctatgctagtatgcatgcttgttttttggttgagaatgagctatggtgattgtg 35289137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 18 - 343
Target Start/End: Complemental strand, 38379621 - 38379261
Alignment:
Q  18 aacgttgttgatccgaaaacatgagtattttagtggtttgaatataatcatatttgtagacgtatgtaatcttccgttttatgctatta----------- 106  Q
    ||||||| |||||| ||||||||||||||| |||||||| |||||||| |||||||||| |||||||||||||||||||||||||||||               
T  38379621 aacgttgctgatccaaaaacatgagtatttcagtggtttaaatataattatatttgtaggcgtatgtaatcttccgttttatgctattaacaacatgaat 38379522  T
Q  107 ------tgtttgttcgcaaatttaacctttttgtttttaacaactttgaatttgtattgtatcaatgtactcta-caatttg--------aatatcgttt 191  Q
           |||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||| || |||||||        ||||||||||    
T  38379521 gttgtgagtttgttcacaaatttatcctttttgtttttaacaactttgaatttgtattgtatcaatgtactttatcaatttgaataaataaatatcgttt 38379422  T
Q  192 atgtttatnnnnnnntatttttaagacaagcaagtaccacc---nnnnnnnnntcatttttaatacaaaattacattttatttagaccaacggaattact 288  Q
    |||||| |       ||||||||| ||||||||||||||||            |||||||||||||||||||||||||| |||||||||||| |||||||    
T  38379421 atgtttgtaaaaaaatatttttaatacaagcaagtaccaccaaaaaaaatatatcatttttaatacaaaattacattttttttagaccaacgaaattact 38379322  T
Q  289 tttattggttc------caatgtcgttagaatatttgttaaaaataatttataattttata 343  Q
    ||||||| |||      ||||||||||||||||||||||||||||||||||||||| ||||    
T  38379321 tttattgattccataaacaatgtcgttagaatatttgttaaaaataatttataattatata 38379261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 108 - 174
Target Start/End: Original strand, 3457291 - 3457357
Alignment:
Q  108 gtttgttcgcaaatttaacctttttgtttttaacaactttgaatttgtattgtatcaatgtactcta 174  Q
    ||||||||||||||| | | |||||||||||| | | |||| |||||||||||||||||||||||||    
T  3457291 gtttgttcgcaaattcatcatttttgtttttagcgaatttggatttgtattgtatcaatgtactcta 3457357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 108 - 174
Target Start/End: Original strand, 39610576 - 39610642
Alignment:
Q  108 gtttgttcgcaaatttaacctttttgtttttaacaactttgaatttgtattgtatcaatgtactcta 174  Q
    |||||||| || ||| | |||||||||||||| | | ||||||||||||||||||||||||||||||    
T  39610576 gtttgttcacagattcatcctttttgtttttagcgaatttgaatttgtattgtatcaatgtactcta 39610642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 108 - 184
Target Start/End: Original strand, 2148109 - 2148186
Alignment:
Q  108 gtttgttcgcaaatttaacctttttgtttttaacaactttgaatttgtattgtatcaatgtactcta-caatttgaat 184  Q
    ||||||||||||||| | ||||||||||| ||   ||||||||||| ||||||||||| |||||||| ||||||||||    
T  2148109 gtttgttcgcaaattcatcctttttgtttatagtgactttgaatttatattgtatcaacgtactctatcaatttgaat 2148186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 108 - 184
Target Start/End: Complemental strand, 40883635 - 40883558
Alignment:
Q  108 gtttgttcgcaaatttaacctttttgtttttaacaactttgaatttgtattgtatcaatgtactcta-caatttgaat 184  Q
    |||||||| || ||| | |||||||||||||| | | |||| ||||||||||||||||||||||||| ||||||||||    
T  40883635 gtttgttcacagattcatcctttttgtttttagcgaatttggatttgtattgtatcaatgtactctatcaatttgaat 40883558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 108 - 184
Target Start/End: Complemental strand, 41868093 - 41868016
Alignment:
Q  108 gtttgttcgcaaatttaacctttttgtttttaacaactttgaatttgtattgtatcaatgtactcta-caatttgaat 184  Q
    |||||||| || ||| | |||||||||||||| | | ||||||||||||||||||| |||||||||| ||||||||||    
T  41868093 gtttgttcacatattcatcctttttgtttttagcgaatttgaatttgtattgtatcgatgtactctatcaatttgaat 41868016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 16 - 100
Target Start/End: Complemental strand, 33605119 - 33605035
Alignment:
Q  16 tcaacgttgttgatccgaaaacatgagtattttagtggtttgaatataatcatatttgtagacgtatgtaatcttccgttttatg 100  Q
    |||||||||  ||||||  ||| ||||| ||||||||| ||||||||| |||||||||||| |||||||||| |  |||||||||    
T  33605119 tcaacgttgcggatccgggaacttgagttttttagtggcttgaatatattcatatttgtaggcgtatgtaatgtgtcgttttatg 33605035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 126 - 174
Target Start/End: Original strand, 48212720 - 48212768
Alignment:
Q  126 cctttttgtttttaacaactttgaatttgtattgtatcaatgtactcta 174  Q
    |||||||||||||||| ||||||||||||||||| ||| ||||||||||    
T  48212720 cctttttgtttttaacgactttgaatttgtattgcatcgatgtactcta 48212768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 126 - 184
Target Start/End: Complemental strand, 13701744 - 13701685
Alignment:
Q  126 cctttttgtttttaacaactttgaatttgtattgtatcaatgtactcta-caatttgaat 184  Q
    |||||||||||||| | | ||||||||||||||||||| |||||||||| ||||||||||    
T  13701744 cctttttgtttttagcgaatttgaatttgtattgtatcgatgtactctatcaatttgaat 13701685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 126 - 184
Target Start/End: Complemental strand, 32080505 - 32080446
Alignment:
Q  126 cctttttgtttttaacaactttgaatttgtattgtatcaatgtactcta-caatttgaat 184  Q
    |||||||||||||| | | ||||||||||||||||||| |||||||||| ||||||||||    
T  32080505 cctttttgtttttagcgaatttgaatttgtattgtatcgatgtactctatcaatttgaat 32080446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 16 - 75
Target Start/End: Complemental strand, 32408692 - 32408633
Alignment:
Q  16 tcaacgttgttgatccgaaaacatgagtattttagtggtttgaatataatcatatttgta 75  Q
    |||| ||||| |||||| |||||||||||||||||||| || |||||| |||||||||||    
T  32408692 tcaatgttgtagatccggaaacatgagtattttagtggcttaaatatagtcatatttgta 32408633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 126 - 184
Target Start/End: Original strand, 55455249 - 55455308
Alignment:
Q  126 cctttttgtttttaacaactttgaatttgtattgtatcaatgtactcta-caatttgaat 184  Q
    |||| ||||||||| | | |||||||||||||||||||||||||||||| ||||||||||    
T  55455249 ccttcttgtttttagcgaatttgaatttgtattgtatcaatgtactctatcaatttgaat 55455308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 127 - 184
Target Start/End: Complemental strand, 4817621 - 4817563
Alignment:
Q  127 ctttttgtttttaacaactttgaatttgtattgtatcaatgtactcta-caatttgaat 184  Q
    ||||||||||||||| | ||||||||| ||||||| |||||||||||| ||||||||||    
T  4817621 ctttttgtttttaacgaatttgaatttatattgtaccaatgtactctatcaatttgaat 4817563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 109 - 163
Target Start/End: Original strand, 11225703 - 11225757
Alignment:
Q  109 tttgttcgcaaatttaacctttttgtttttaacaactttgaatttgtattgtatc 163  Q
    ||||||||||||||   |||||||||||||||||||||| ||||| |||||||||    
T  11225703 tttgttcgcaaattcgtcctttttgtttttaacaactttaaatttctattgtatc 11225757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 128 - 173
Target Start/End: Complemental strand, 2522819 - 2522774
Alignment:
Q  128 tttttgtttttaacaactttgaatttgtattgtatcaatgtactct 173  Q
    ||||| |||||| | |||||||||||||||||||||||||||||||    
T  2522819 tttttatttttagcgactttgaatttgtattgtatcaatgtactct 2522774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 108 - 184
Target Start/End: Complemental strand, 54238779 - 54238702
Alignment:
Q  108 gtttgttcgcaaatttaacctttttgtttttaacaactttgaatttgtattgtatcaatgtactcta-caatttgaat 184  Q
    |||||||| || ||| | ||||||| |||||| | | ||||||||||||||||||||||||||| || ||||||||||    
T  54238779 gtttgttcacagattcatcctttttatttttagcgaatttgaatttgtattgtatcaatgtactttatcaatttgaat 54238702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 109 - 184
Target Start/End: Original strand, 2192448 - 2192524
Alignment:
Q  109 tttgttcgcaaatttaacctttttgtttttaacaactttgaatttgtattgtatcaatgtactcta-caatttgaat 184  Q
    ||||||| || ||| | ||||||| |||||| | | ||||||||||||||||||| |||||||||| ||||||||||    
T  2192448 tttgttcacagattcatcctttttatttttagcgaatttgaatttgtattgtatcgatgtactctatcaatttgaat 2192524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 126 - 174
Target Start/End: Complemental strand, 32408627 - 32408579
Alignment:
Q  126 cctttttgtttttaacaactttgaatttgtattgtatcaatgtactcta 174  Q
    |||||||||||||| |  |||||||||||||||||||| ||||||||||    
T  32408627 cctttttgtttttagcggctttgaatttgtattgtatcgatgtactcta 32408579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 126 - 184
Target Start/End: Original strand, 14585849 - 14585908
Alignment:
Q  126 cctttttgtttttaacaactttgaatttgtattgtatcaatgtactcta-caatttgaat 184  Q
    |||||||||||||| | | ||||||||||||||||||  |||||||||| ||||||||||    
T  14585849 cctttttgtttttagcgaatttgaatttgtattgtattgatgtactctatcaatttgaat 14585908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 126 - 184
Target Start/End: Complemental strand, 30156032 - 30155973
Alignment:
Q  126 cctttttgtttttaacaactttgaatttgtattgtatcaatgtactcta-caatttgaat 184  Q
    |||||||||||||| | | |||| |||||||||||||| |||||||||| ||||||||||    
T  30156032 cctttttgtttttagcgaatttggatttgtattgtatcgatgtactctatcaatttgaat 30155973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 108 - 175
Target Start/End: Original strand, 31550279 - 31550346
Alignment:
Q  108 gtttgttcgcaaatttaacctttttgtttttaacaactttgaatttgtattgtatcaatgtactctac 175  Q
    ||||||||||| ||| | ||| |||||||||| | || |||||||||||  |||||||||||||||||    
T  31550279 gtttgttcgcagattcatcctatttgtttttagcgaccttgaatttgtaccgtatcaatgtactctac 31550346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 126 - 184
Target Start/End: Original strand, 38530311 - 38530370
Alignment:
Q  126 cctttttgtttttaacaactttgaatttgtattgtatcaatgtactcta-caatttgaat 184  Q
    ||||||||||||||| || ||||  ||||||||||||| |||||||||| ||||||||||    
T  38530311 cctttttgtttttaaaaaatttgggtttgtattgtatcgatgtactctatcaatttgaat 38530370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 126 - 184
Target Start/End: Complemental strand, 55090441 - 55090382
Alignment:
Q  126 cctttttgtttttaacaactttgaatttgtattgtatcaatgtactcta-caatttgaat 184  Q
    |||||||||||||| | | |||| |||||||||||||| |||||||||| ||||||||||    
T  55090441 cctttttgtttttagcgaatttggatttgtattgtatcgatgtactctatcaatttgaat 55090382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 108 - 174
Target Start/End: Original strand, 25084378 - 25084444
Alignment:
Q  108 gtttgttcgcaaatttaacctttttgtttttaacaactttgaatttgtattgtatcaatgtactcta 174  Q
    ||||||| ||||||||| | |||   |||||||||| |||||||||||||||||| ||| |||||||    
T  25084378 gtttgtttgcaaatttatcatttacatttttaacaattttgaatttgtattgtattaatatactcta 25084444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 108 - 174
Target Start/End: Original strand, 31270678 - 31270744
Alignment:
Q  108 gtttgttcgcaaatttaacctttttgtttttaacaactttgaatttgtattgtatcaatgtactcta 174  Q
    |||||||| || ||| | |||||||||||||| | | ||||||||||||||||||  ||||||||||    
T  31270678 gtttgttcacagattcatcctttttgtttttagcgaatttgaatttgtattgtattgatgtactcta 31270744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 108 - 174
Target Start/End: Complemental strand, 44984625 - 44984559
Alignment:
Q  108 gtttgttcgcaaatttaacctttttgtttttaacaactttgaatttgtattgtatcaatgtactcta 174  Q
    |||||||||||  |||| || |||||||||||   | |||||||||||||||||||||| |||||||    
T  44984625 gtttgttcgcatgtttatcccttttgtttttagagattttgaatttgtattgtatcaatatactcta 44984559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 128 - 174
Target Start/End: Complemental strand, 53155170 - 53155124
Alignment:
Q  128 tttttgtttttaacaactttgaatttgtattgtatcaatgtactcta 174  Q
    |||||||||||| | | ||||||||||||||||||| ||||||||||    
T  53155170 tttttgtttttagcgaatttgaatttgtattgtatcgatgtactcta 53155124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 108 - 184
Target Start/End: Complemental strand, 105807 - 105731
Alignment:
Q  108 gtttgttcgcaaatttaacctttttgtttttaacaactttgaatttgtattgtatcaatgtactcta-caatttgaat 184  Q
    ||||||||| | ||| | |||||||||| |||   ||||||| |||||||||||||||||||||||| ||||||||||    
T  105807 gtttgttcggagattcatcctttttgttcttagtgactttga-tttgtattgtatcaatgtactctatcaatttgaat 105731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 108 - 184
Target Start/End: Complemental strand, 1074654 - 1074577
Alignment:
Q  108 gtttgttcgcaaatttaacctttttgtttttaacaactttgaatttgtattgtatcaatgtactcta-caatttgaat 184  Q
    |||||||| || ||| | |||||||||||||| | | |||| ||||||||| |||| |||||||||| ||||||||||    
T  1074654 gtttgttcacatattcatcctttttgtttttagcgaatttggatttgtattatatcgatgtactctatcaatttgaat 1074577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 27 - 76
Target Start/End: Original strand, 11225605 - 11225654
Alignment:
Q  27 gatccgaaaacatgagtattttagtggtttgaatataatcatatttgtag 76  Q
    ||||||||||||||||||||||  || |||||||||| |||| |||||||    
T  11225605 gatccgaaaacatgagtattttgttgatttgaatatagtcatgtttgtag 11225654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 108 - 184
Target Start/End: Complemental strand, 31462515 - 31462438
Alignment:
Q  108 gtttgttcgcaaatttaacctttttgtttttaacaactttgaatttgtattgtatcaatgtactcta-caatttgaat 184  Q
    ||||||||||| ||| | | |||||||||||| | | ||| ||||||||||||||| ||||||| || ||||||||||    
T  31462515 gtttgttcgcatattcatcatttttgtttttagcgaatttaaatttgtattgtatcgatgtactttatcaatttgaat 31462438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 108 - 184
Target Start/End: Original strand, 33637763 - 33637840
Alignment:
Q  108 gtttgttcgcaaatttaacctttttgtttttaacaactttgaatttgtattgtatcaatgtactcta-caatttgaat 184  Q
    |||||||| || ||| | |||||||||||||| | | |||| |||||||||||||| ||||||| || ||||||||||    
T  33637763 gtttgttcacagattcatcctttttgtttttagcgaatttggatttgtattgtatcgatgtactttatcaatttgaat 33637840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 122 - 162
Target Start/End: Original strand, 550563 - 550603
Alignment:
Q  122 ttaacctttttgtttttaacaactttgaatttgtattgtat 162  Q
    |||| ||||||||||||| | ||||||||||||||||||||    
T  550563 ttaatctttttgtttttagcgactttgaatttgtattgtat 550603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 126 - 174
Target Start/End: Complemental strand, 25111911 - 25111863
Alignment:
Q  126 cctttttgtttttaacaactttgaatttgtattgtatcaatgtactcta 174  Q
    ||||||| ||||||| |||||||||||| |||| |||| ||||||||||    
T  25111911 cctttttctttttaataactttgaatttatattatatcgatgtactcta 25111863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 134 - 174
Target Start/End: Original strand, 25970461 - 25970501
Alignment:
Q  134 tttttaacaactttgaatttgtattgtatcaatgtactcta 174  Q
    ||||||||||||||||||||||| | ||||||| |||||||    
T  25970461 tttttaacaactttgaatttgtaatatatcaatttactcta 25970501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 34 - 106
Target Start/End: Complemental strand, 44984713 - 44984641
Alignment:
Q  34 aaacatgagtattttagtggtttgaatataatcatatttgtagacgtatgtaatcttccgttttatgctatta 106  Q
    |||||||||||||||   |  ||||||||| |||||||||||||  |||||| ||||| ||||||| ||||||    
T  44984713 aaacatgagtattttgaagacttgaatatagtcatatttgtagatatatgtactcttctgttttatactatta 44984641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 47; Significance: 2e-17; HSPs: 37)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 16 - 106
Target Start/End: Original strand, 31994276 - 31994366
Alignment:
Q  16 tcaacgttgttgatccgaaaacatgagtattttagtggtttgaatataatcatatttgtagacgtatgtaatcttccgttttatgctatta 106  Q
    |||||||||  || ||||||||||||||||||| |||| |||||||||||||||||||||  | |||||| | | ||||||||||||||||    
T  31994276 tcaacgttgcagaaccgaaaacatgagtattttggtggcttgaatataatcatatttgtacgcatatgtactttgccgttttatgctatta 31994366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 108 - 184
Target Start/End: Original strand, 27091077 - 27091154
Alignment:
Q  108 gtttgttcgcaaatttaacctttttgtttttaacaactttgaatttgtattgtatcaatgtactcta-caatttgaat 184  Q
    ||||||||||| ||||| |||||||||||||||  |||||| |||||||||||||| |||||||||| ||||||||||    
T  27091077 gtttgttcgcatatttatcctttttgtttttaatgactttggatttgtattgtatcgatgtactctatcaatttgaat 27091154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 108 - 184
Target Start/End: Complemental strand, 8517211 - 8517134
Alignment:
Q  108 gtttgttcgcaaatttaacctttttgtttttaacaactttgaatttgtattgtatcaatgtactcta-caatttgaat 184  Q
    |||||||| |||||| | |||||||||||||| | | |||| ||||||||||||||||||||||||| ||||||||||    
T  8517211 gtttgttcacaaattcatcctttttgtttttagcgaatttggatttgtattgtatcaatgtactctatcaatttgaat 8517134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 126 - 184
Target Start/End: Complemental strand, 626293 - 626234
Alignment:
Q  126 cctttttgtttttaacaactttgaatttgtattgtatcaatgtactcta-caatttgaat 184  Q
    |||||||||||||| ||| ||||||||||||||||||| |||||||||| ||||||||||    
T  626293 cctttttgtttttagcaaatttgaatttgtattgtatcgatgtactctatcaatttgaat 626234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 126 - 184
Target Start/End: Original strand, 42197940 - 42197999
Alignment:
Q  126 cctttttgtttttaacaactttgaatttgtattgtatcaatgtactcta-caatttgaat 184  Q
    |||||||||||||| ||| ||||||||||||||||||| |||||||||| ||||||||||    
T  42197940 cctttttgtttttagcaaatttgaatttgtattgtatcgatgtactctatcaatttgaat 42197999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 108 - 184
Target Start/End: Original strand, 28837424 - 28837501
Alignment:
Q  108 gtttgttcgcaaatttaacctttttgtttttaacaactttgaatttgtattgtatcaatgtactcta-caatttgaat 184  Q
    |||| ||| |||||||| |||||||||||||| | | |||| |||||||||||||| |||||||||| ||||||||||    
T  28837424 gtttattcacaaatttatcctttttgtttttagcgaatttggatttgtattgtatcgatgtactctatcaatttgaat 28837501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 11 - 106
Target Start/End: Complemental strand, 6082302 - 6082207
Alignment:
Q  11 catcatcaacgttgttgatccgaaaacatgagtattttagtggtttgaatataatcatatttgtagacgtatgtaatcttccgttttatgctatta 106  Q
    |||| |||||||||  |||||| ||||||||||||| | | |  ||||||||| |||||||||||| | |||||| | | ||||||||||||||||    
T  6082302 catcgtcaacgttgcagatccggaaacatgagtattctggagacttgaatatagtcatatttgtaggcatatgtactttgccgttttatgctatta 6082207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 126 - 184
Target Start/End: Original strand, 7060701 - 7060760
Alignment:
Q  126 cctttttgtttttaacaactttgaatttgtattgtatcaatgtactcta-caatttgaat 184  Q
    |||||||||||||| | | |||| ||||||||||||||||||||||||| ||||||||||    
T  7060701 cctttttgtttttagcgaatttggatttgtattgtatcaatgtactctatcaatttgaat 7060760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 108 - 171
Target Start/End: Original strand, 56062343 - 56062406
Alignment:
Q  108 gtttgttcgcaaatttaacctttttgtttttaacaactttgaatttgtattgtatcaatgtact 171  Q
    ||||||||| | ||| | |||||||||||||| | |||||||||||||||||||| ||||||||    
T  56062343 gtttgttcgtatattaatcctttttgtttttagcgactttgaatttgtattgtatgaatgtact 56062406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 108 - 185
Target Start/End: Original strand, 56172182 - 56172260
Alignment:
Q  108 gtttgttcgcaaatttaacctttttgtttttaacaactttgaatttgtattgtatcaatgtactcta-caatttgaata 185  Q
    ||||||||||| ||| ||||||||||||||  |  |||||  |||||||||||||||||||| |||| |||||||||||    
T  56172182 gtttgttcgcagattcaacctttttgttttctatgactttatatttgtattgtatcaatgtagtctatcaatttgaata 56172260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 108 - 184
Target Start/End: Complemental strand, 394026 - 393949
Alignment:
Q  108 gtttgttcgcaaatttaacctttttgtttttaacaactttgaatttgtattgtatcaatgtactcta-caatttgaat 184  Q
    |||||||| || ||| | |||||||||||||||| | |||| |||||||||||||| ||||||| || ||||||||||    
T  394026 gtttgttcacagattcaccctttttgtttttaacgaatttggatttgtattgtatcgatgtactttatcaatttgaat 393949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 108 - 184
Target Start/End: Original strand, 6912049 - 6912126
Alignment:
Q  108 gtttgttcgcaaatttaacctttttgtttttaacaactttgaatttgtattgtatcaatgtactcta-caatttgaat 184  Q
    |||||||| || ||| | |||||||||||||| | | ||||||||||||||||||  |||||||||| ||||||||||    
T  6912049 gtttgttcacagattcatcctttttgtttttagcgaatttgaatttgtattgtattgatgtactctatcaatttgaat 6912126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 108 - 184
Target Start/End: Complemental strand, 24611550 - 24611473
Alignment:
Q  108 gtttgttcgcaaatttaacctttttgtttttaacaactttgaatttgtattgtatcaatgtactcta-caatttgaat 184  Q
    |||||||| || ||| | |||||||||||||| | | |||  ||||||||||||||||||||||||| ||||||||||    
T  24611550 gtttgttcacagattcatcctttttgtttttagcgaatttagatttgtattgtatcaatgtactctatcaatttgaat 24611473  T

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Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 13 - 106
Target Start/End: Original strand, 31932507 - 31932600
Alignment:
Q  13 tcatcaacgttgttgatccgaaaacatgagtattttagtggtttgaatataatcatatttgtagacgtatgtaatcttccgttttatgctatta 106  Q
    |||||||||||   || ||| |||||||||||||||   || |||||||||||||||||||||| | |||||| |||   ||||||||||||||    
T  31932507 tcatcaacgttacagaaccggaaacatgagtattttgaaggcttgaatataatcatatttgtaggcatatgtactctattgttttatgctatta 31932600  T

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Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 108 - 184
Target Start/End: Original strand, 31932616 - 31932693
Alignment:
Q  108 gtttgttcgcaaatttaacctttttgtttttaacaactttgaatttgtattgtatcaatgtactcta-caatttgaat 184  Q
    ||||||||||| ||| |  ||||||||||||||| | |||||||||||||||| || ||||||| || ||||||||||    
T  31932616 gtttgttcgcatattcatactttttgtttttaacgattttgaatttgtattgtgtcgatgtactttatcaatttgaat 31932693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 108 - 184
Target Start/End: Complemental strand, 45350822 - 45350745
Alignment:
Q  108 gtttgttcgcaaatttaacctttttgtttttaacaactttgaatttgtattgtatcaatgtactcta-caatttgaat 184  Q
    |||||||| || ||| | |||||||||||||| | | |||| |||||||||||||| |||||||||| ||||||||||    
T  45350822 gtttgttcacagattcaccctttttgtttttagcgaatttggatttgtattgtatcgatgtactctatcaatttgaat 45350745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 108 - 184
Target Start/End: Complemental strand, 45360301 - 45360224
Alignment:
Q  108 gtttgttcgcaaatttaacctttttgtttttaacaactttgaatttgtattgtatcaatgtactcta-caatttgaat 184  Q
    |||||||| || ||| | |||||||||||||| | | |||| |||||||||||||| |||||||||| ||||||||||    
T  45360301 gtttgttcacagattcaccctttttgtttttagcgaatttggatttgtattgtatcgatgtactctatcaatttgaat 45360224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 11 - 76
Target Start/End: Original strand, 46829650 - 46829715
Alignment:
Q  11 catcatcaacgttgttgatccgaaaacatgagtattttagtggtttgaatataatcatatttgtag 76  Q
    |||| ||||||||||  ||| ||||| |||||||||||| ||| |||||||||| |||||||||||    
T  46829650 catcgtcaacgttgtaaatctgaaaatatgagtattttattggcttgaatataaccatatttgtag 46829715  T

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Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 16 - 76
Target Start/End: Original strand, 18995534 - 18995594
Alignment:
Q  16 tcaacgttgttgatccgaaaacatgagtattttagtggtttgaatataatcatatttgtag 76  Q
    |||||||||  |||||  |||||||| ||||| ||||| ||||||||||||||||||||||    
T  18995534 tcaacgttgcagatccagaaacatgaatatttcagtggcttgaatataatcatatttgtag 18995594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 145 - 184
Target Start/End: Complemental strand, 29266619 - 29266579
Alignment:
Q  145 tttgaatttgtattgtatcaatgtactcta-caatttgaat 184  Q
    |||||||||||||||||||||||||||||| ||||||||||    
T  29266619 tttgaatttgtattgtatcaatgtactctatcaatttgaat 29266579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 109 - 184
Target Start/End: Complemental strand, 56236582 - 56236506
Alignment:
Q  109 tttgttcgcaaatttaacctttttgtttttaacaactttgaatttgtattgtatcaatgtactcta-caatttgaat 184  Q
    ||||||| || ||||| |||||||||||||| | | |||| || ||||||||||| |||||||||| ||||||||||    
T  56236582 tttgttcacagatttatcctttttgtttttagcgattttggatatgtattgtatcgatgtactctatcaatttgaat 56236506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 126 - 184
Target Start/End: Original strand, 3159349 - 3159408
Alignment:
Q  126 cctttttgtttttaacaactttgaatttgtattgtatcaatgtactcta-caatttgaat 184  Q
    ||||||||||||||   ||||||||||||||||||||| ||||||| || ||||||||||    
T  3159349 cctttttgtttttagtgactttgaatttgtattgtatcgatgtactttatcaatttgaat 3159408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 126 - 184
Target Start/End: Original strand, 6882331 - 6882390
Alignment:
Q  126 cctttttgtttttaacaactttgaatttgtattgtatcaatgtactcta-caatttgaat 184  Q
    |||||||||||||| | | |||| |||||||||||||| |||||||||| ||||||||||    
T  6882331 cctttttgtttttagcgaatttggatttgtattgtatcgatgtactctatcaatttgaat 6882390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 130 - 184
Target Start/End: Original strand, 41837705 - 41837760
Alignment:
Q  130 tttgtttttaacaactttgaatttgtattgtatcaatgtactcta-caatttgaat 184  Q
    |||||||||||| |||||||||||||| |||||  |||||||||| ||||||||||    
T  41837705 tttgtttttaacgactttgaatttgtagtgtattgatgtactctatcaatttgaat 41837760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 128 - 174
Target Start/End: Complemental strand, 477753 - 477707
Alignment:
Q  128 tttttgtttttaacaactttgaatttgtattgtatcaatgtactcta 174  Q
    |||||||||||| | | |||||||||||| |||||||||||||||||    
T  477753 tttttgtttttagcgaatttgaatttgtactgtatcaatgtactcta 477707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 108 - 174
Target Start/End: Complemental strand, 18502594 - 18502528
Alignment:
Q  108 gtttgttcgcaaatttaacctttttgtttttaacaactttgaatttgtattgtatcaatgtactcta 174  Q
    |||||||| || ||| | |||||||||||||| | | |||| |||||||||||||| ||||||||||    
T  18502594 gtttgttcacagattcatcctttttgtttttagcgaatttggatttgtattgtatcgatgtactcta 18502528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 16 - 106
Target Start/End: Original strand, 24789437 - 24789527
Alignment:
Q  16 tcaacgttgttgatccgaaaacatgagtattttagtggtttgaatataatcatatttgtagacgtatgtaatcttccgttttatgctatta 106  Q
    |||||||||  |||||| |||| | ||||||||  ||||||||||||||||||||| |||| | |||||| | |  |||||||| ||||||    
T  24789437 tcaacgttgcagatccggaaacttaagtattttgttggtttgaatataatcatattcgtaggcatatgtattttgtcgttttattctatta 24789527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 16 - 106
Target Start/End: Complemental strand, 24818822 - 24818732
Alignment:
Q  16 tcaacgttgttgatccgaaaacatgagtattttagtggtttgaatataatcatatttgtagacgtatgtaatcttccgttttatgctatta 106  Q
    |||||||||  |||||| |||| | ||||||||  ||||||||||||||||||||| |||| | |||||| | |  |||||||| ||||||    
T  24818822 tcaacgttgcagatccggaaacttaagtattttgttggtttgaatataatcatattcgtaggcatatgtattttgtcgttttattctatta 24818732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 128 - 184
Target Start/End: Complemental strand, 3171356 - 3171299
Alignment:
Q  128 tttttgtttttaacaactttgaatttgtattgtatcaatgtactcta-caatttgaat 184  Q
    ||||| |||||||  ||||||||||||||||||||||| ||||| || ||||||||||    
T  3171356 tttttatttttaagtactttgaatttgtattgtatcaacgtactatatcaatttgaat 3171299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 127 - 183
Target Start/End: Complemental strand, 7860942 - 7860885
Alignment:
Q  127 ctttttgtttttaacaactttgaatttgtattgtatcaatgtactcta-caatttgaa 183  Q
    ||||||||||||||| | |||||||||||| |||||| ||||| |||| |||||||||    
T  7860942 ctttttgtttttaacgaatttgaatttgtactgtatcgatgtattctatcaatttgaa 7860885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 128 - 161
Target Start/End: Complemental strand, 9255044 - 9255011
Alignment:
Q  128 tttttgtttttaacaactttgaatttgtattgta 161  Q
    |||||||||||||||||||| |||||||||||||    
T  9255044 tttttgtttttaacaactttaaatttgtattgta 9255011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 108 - 184
Target Start/End: Complemental strand, 24568467 - 24568390
Alignment:
Q  108 gtttgttcgcaaatttaacctttttgtttttaacaactttgaatttgtattgtatcaatgtactcta-caatttgaat 184  Q
    |||||||| || ||| | |||||||||||||| | | ||||||||| ||||||||| ||||| |||| ||||||||||    
T  24568467 gtttgttcacatattcatcctttttgtttttagcgaatttgaatttatattgtatcgatgtaatctatcaatttgaat 24568390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 108 - 184
Target Start/End: Original strand, 31522315 - 31522392
Alignment:
Q  108 gtttgttcgcaaatttaacctttttgtttttaacaactttgaatttgtattgtatcaatgtactcta-caatttgaat 184  Q
    |||||||| || ||| | |||||||||||||| | | |||| | |||||||||||| |||||||||| ||||||||||    
T  31522315 gtttgttcacagattcatcctttttgtttttagcgaatttggacttgtattgtatcgatgtactctatcaatttgaat 31522392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 128 - 184
Target Start/End: Complemental strand, 32616591 - 32616534
Alignment:
Q  128 tttttgtttttaacaactttgaatttgtattgtatcaatgtactcta-caatttgaat 184  Q
    |||||||||||| | | |||||||||||||| |||| |||||||||| ||||||||||    
T  32616591 tttttgtttttagcgaatttgaatttgtattatatcgatgtactctatcaatttgaat 32616534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 108 - 184
Target Start/End: Complemental strand, 38943909 - 38943832
Alignment:
Q  108 gtttgttcgcaaatttaacctttttgtttttaacaactttgaatttgtattgtatcaatgtactcta-caatttgaat 184  Q
    |||||||| || ||| | |||||||||||||| |   |||| |||||||||||||| |||||||||| ||||||||||    
T  38943909 gtttgttcacagattcatcctttttgtttttagcggatttggatttgtattgtatcgatgtactctatcaatttgaat 38943832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 148 - 183
Target Start/End: Original strand, 23926429 - 23926465
Alignment:
Q  148 gaatttgtattgtatcaatgtactcta-caatttgaa 183  Q
    ||||||||||||||||||||||||||| |||||||||    
T  23926429 gaatttgtattgtatcaatgtactctatcaatttgaa 23926465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 108 - 183
Target Start/End: Complemental strand, 36124109 - 36124033
Alignment:
Q  108 gtttgttcgcaaatttaacctttttgtttttaacaactttgaatttgtattgtatcaatgtactcta-caatttgaa 183  Q
    |||||||| || ||| | |||||||||||||| | | |||| |||||||||||||| ||| |||||| |||||||||    
T  36124109 gtttgttcacagattcatcctttttgtttttagcgaatttggatttgtattgtatcgatggactctatcaatttgaa 36124033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0155 (Bit Score: 46; Significance: 6e-17; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 108 - 184
Target Start/End: Original strand, 35444 - 35521
Alignment:
Q  108 gtttgttcgcaaatttaacctttttgtttttaacaactttgaatttgtattgtatcaatgtactcta-caatttgaat 184  Q
    |||||||| |||||||| |||||||||||||| ||| |||| |||||||||||||| |||||||||| ||||||||||    
T  35444 gtttgttcacaaatttatcctttttgtttttagcaaatttggatttgtattgtatcgatgtactctatcaatttgaat 35521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 46; Significance: 6e-17; HSPs: 19)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 108 - 184
Target Start/End: Original strand, 2488491 - 2488568
Alignment:
Q  108 gtttgttcgcaaatttaacctttttgtttttaacaactttgaatttgtattgtatcaatgtactcta-caatttgaat 184  Q
    ||||||||||| ||||| |||||||||||||||  |||||| |||||||||||||| |||||||||| ||||||||||    
T  2488491 gtttgttcgcatatttatcctttttgtttttaatgactttggatttgtattgtatcgatgtactctatcaatttgaat 2488568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 128 - 174
Target Start/End: Original strand, 31395624 - 31395670
Alignment:
Q  128 tttttgtttttaacaactttgaatttgtattgtatcaatgtactcta 174  Q
    ||||||||||||||||||||||||||| |||||||| ||||||||||    
T  31395624 tttttgtttttaacaactttgaatttggattgtatcgatgtactcta 31395670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 108 - 184
Target Start/End: Original strand, 4394139 - 4394216
Alignment:
Q  108 gtttgttcgcaaatttaacctttttgtttttaacaactttgaatttgtattgtatcaatgtactcta-caatttgaat 184  Q
    |||||||| || ||| | || ||||||||||| ||| |||| ||||||||||||||||||||||||| ||||||||||    
T  4394139 gtttgttcacagattcatccgttttgtttttagcaaatttggatttgtattgtatcaatgtactctatcaatttgaat 4394216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 128 - 184
Target Start/End: Complemental strand, 6295981 - 6295924
Alignment:
Q  128 tttttgtttttaacaactttgaatttgtattgtatcaatgtactcta-caatttgaat 184  Q
    |||||||||||| ||| ||||||||||||||||||| |||||||||| ||||||||||    
T  6295981 tttttgtttttagcaaatttgaatttgtattgtatcgatgtactctatcaatttgaat 6295924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 128 - 184
Target Start/End: Complemental strand, 6302791 - 6302734
Alignment:
Q  128 tttttgtttttaacaactttgaatttgtattgtatcaatgtactcta-caatttgaat 184  Q
    |||||||||||| ||| ||||||||||||||||||| |||||||||| ||||||||||    
T  6302791 tttttgtttttagcaaatttgaatttgtattgtatcgatgtactctatcaatttgaat 6302734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 108 - 184
Target Start/End: Complemental strand, 19402604 - 19402527
Alignment:
Q  108 gtttgttcgcaaatttaacctttttgtttttaacaactttgaatttgtattgtatcaatgtactcta-caatttgaat 184  Q
    |||||||| || ||| | |||||||||||||||| | |||| |||||||||||||| |||||||||| ||||||||||    
T  19402604 gtttgttcacatattcatcctttttgtttttaacgaatttggatttgtattgtatcgatgtactctatcaatttgaat 19402527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 108 - 184
Target Start/End: Original strand, 30813426 - 30813503
Alignment:
Q  108 gtttgttcgcaaatttaacctttttgtttttaacaactttgaatttgtattgtatcaatgtactcta-caatttgaat 184  Q
    |||||||| || ||| | |||||||||||||| | | ||||||||||||||||||| |||||||||| ||||||||||    
T  30813426 gtttgttcacagattcatcctttttgtttttagcgaatttgaatttgtattgtatcgatgtactctatcaatttgaat 30813503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 108 - 174
Target Start/End: Original strand, 31705534 - 31705600
Alignment:
Q  108 gtttgttcgcaaatttaacctttttgtttttaacaactttgaatttgtattgtatcaatgtactcta 174  Q
    |||||||| || ||||| ||||||| |||||| | | ||||||||||||||||||| ||||||||||    
T  31705534 gtttgttcacagatttatcctttttatttttagccaatttgaatttgtattgtatcgatgtactcta 31705600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 108 - 184
Target Start/End: Complemental strand, 12654070 - 12653993
Alignment:
Q  108 gtttgttcgcaaatttaacctttttgtttttaacaactttgaatttgtattgtatcaatgtactcta-caatttgaat 184  Q
    ||||||||||| ||| | | |||||||||||| | |||||| | |||||||||||| |||||||||| ||||||||||    
T  12654070 gtttgttcgcagattcatcatttttgtttttagcgactttggaattgtattgtatcgatgtactctatcaatttgaat 12653993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 108 - 184
Target Start/End: Complemental strand, 14782907 - 14782830
Alignment:
Q  108 gtttgttcgcaaatttaacctttttgtttttaacaactttgaatttgtattgtatcaatgtactcta-caatttgaat 184  Q
    |||||||| || ||| | |||||||||||||| | | |||| |||||||||||||| |||||||||| ||||||||||    
T  14782907 gtttgttcacagattcatcctttttgtttttagcgaatttggatttgtattgtatcgatgtactctatcaatttgaat 14782830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 108 - 157
Target Start/End: Original strand, 35039045 - 35039094
Alignment:
Q  108 gtttgttcgcaaatttaacctttttgtttttaacaactttgaatttgtat 157  Q
    ||||||||||| ||||| | |||||||||||||| |||||||||||||||    
T  35039045 gtttgttcgcagatttatcatttttgtttttaacgactttgaatttgtat 35039094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 108 - 184
Target Start/End: Complemental strand, 35219665 - 35219588
Alignment:
Q  108 gtttgttcgcaaatttaacctttttgtttttaacaactttgaatttgtattgtatcaatgtactcta-caatttgaat 184  Q
    |||||||| || ||| | |||||||||||||| | | |||| |||||||||||||| |||||||||| ||||||||||    
T  35219665 gtttgttcacagattcatcctttttgtttttagcgaatttggatttgtattgtatcgatgtactctaccaatttgaat 35219588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 126 - 184
Target Start/End: Complemental strand, 15589859 - 15589800
Alignment:
Q  126 cctttttgtttttaacaactttgaatttgtattgtatcaatgtactcta-caatttgaat 184  Q
    |||||||||||||| ||| |||| |||| ||||||||| |||||||||| ||||||||||    
T  15589859 cctttttgtttttagcaaatttggatttatattgtatcgatgtactctatcaatttgaat 15589800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 108 - 174
Target Start/End: Complemental strand, 8978508 - 8978442
Alignment:
Q  108 gtttgttcgcaaatttaacctttttgtttttaacaactttgaatttgtattgtatcaatgtactcta 174  Q
    |||||||||||| || | | |||||||||||  | |||||||||||||||||||| ||| |||||||    
T  8978508 gtttgttcgcaatttcatcttttttgtttttggcgactttgaatttgtattgtattaatatactcta 8978442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 108 - 184
Target Start/End: Complemental strand, 8693423 - 8693346
Alignment:
Q  108 gtttgttcgcaaatttaacctttttgtttttaacaactttgaatttgtattgtatcaatgtactcta-caatttgaat 184  Q
    |||||||| || ||| | ||||||||||||||   | |||| |||||||||||||| |||||||||| ||||||||||    
T  8693423 gtttgttcacagattcatcctttttgtttttagtgaatttggatttgtattgtatcgatgtactctatcaatttgaat 8693346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 128 - 184
Target Start/End: Complemental strand, 12481111 - 12481054
Alignment:
Q  128 tttttgtttttaacaactttgaatttgtattgtatcaatgtactcta-caatttgaat 184  Q
    |||||||||||| ||| |||| |||||||||||||| ||||||| || ||||||||||    
T  12481111 tttttgtttttagcaaatttggatttgtattgtatcgatgtactttatcaatttgaat 12481054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 34 - 106
Target Start/End: Original strand, 15176072 - 15176144
Alignment:
Q  34 aaacatgagtattttagtggtttgaatataatcatatttgtagacgtatgtaatcttccgttttatgctatta 106  Q
    |||||||||||||| ||||| || || ||| ||||||||||||   |||||| ||| |||||||||| |||||    
T  15176072 aaacatgagtatttcagtggcttcaagatagtcatatttgtaggaatatgtactctaccgttttatgatatta 15176144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 126 - 162
Target Start/End: Complemental strand, 20028450 - 20028414
Alignment:
Q  126 cctttttgtttttaacaactttgaatttgtattgtat 162  Q
    |||||||||| | ||||||||||||||||||||||||    
T  20028450 cctttttgttatcaacaactttgaatttgtattgtat 20028414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 129 - 184
Target Start/End: Original strand, 23654639 - 23654695
Alignment:
Q  129 ttttgtttttaacaactttgaatttgtattgtatcaatgtactcta-caatttgaat 184  Q
    ||||||||||| | | |||| |||||||||||||| |||||||||| ||||||||||    
T  23654639 ttttgtttttagcgaatttggatttgtattgtatcgatgtactctatcaatttgaat 23654695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 46; Significance: 6e-17; HSPs: 27)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 13 - 106
Target Start/End: Original strand, 14535143 - 14535236
Alignment:
Q  13 tcatcaacgttgttgatccgaaaacatgagtattttagtggtttgaatataatcatatttgtagacgtatgtaatcttccgttttatgctatta 106  Q
    ||||||||||||  |||||| | ||||||||||| | |||| |||||||||||||||||| ||||| |||||| ||| ||||||||| ||||||    
T  14535143 tcatcaacgttgcagatccggatacatgagtattcttgtggcttgaatataatcatatttatagacatatgtactctgccgttttatcctatta 14535236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 109 - 174
Target Start/End: Complemental strand, 35275815 - 35275750
Alignment:
Q  109 tttgttcgcaaatttaacctttttgtttttaacaactttgaatttgtattgtatcaatgtactcta 174  Q
    |||||||||||||| | ||||||| ||||| || ||||||||||||||||||||||||||||||||    
T  35275815 tttgttcgcaaattcatcctttttattttttacgactttgaatttgtattgtatcaatgtactcta 35275750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 128 - 174
Target Start/End: Original strand, 7151185 - 7151231
Alignment:
Q  128 tttttgtttttaacaactttgaatttgtattgtatcaatgtactcta 174  Q
    |||||||||||||| |||||||||||||||||||||||| |||||||    
T  7151185 tttttgtttttaacgactttgaatttgtattgtatcaatttactcta 7151231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 108 - 184
Target Start/End: Complemental strand, 2555102 - 2555025
Alignment:
Q  108 gtttgttcgcaaatttaacctttttgtttttaacaactttgaatttgtattgtatcaatgtactcta-caatttgaat 184  Q
    |||||||| || ||| | ||||||||||||||| || |||| |||||||||||||| |||||||||| ||||||||||    
T  2555102 gtttgttcacatattcatcctttttgtttttaagaaatttggatttgtattgtatcgatgtactctatcaatttgaat 2555025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 108 - 184
Target Start/End: Original strand, 6635617 - 6635694
Alignment:
Q  108 gtttgttcgcaaatttaacctttttgtttttaacaactttgaatttgtattgtatcaatgtactcta-caatttgaat 184  Q
    |||||||| || ||| | |||||||||||||||| | ||||||||| ||||||||| |||||||||| ||||||||||    
T  6635617 gtttgttcacagattcatcctttttgtttttaacgaatttgaatttatattgtatcgatgtactctatcaatttgaat 6635694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 108 - 184
Target Start/End: Complemental strand, 17095993 - 17095916
Alignment:
Q  108 gtttgttcgcaaatttaacctttttgtttttaacaactttgaatttgtattgtatcaatgtactcta-caatttgaat 184  Q
    |||||||| || ||| | |||||||||||||| | | ||||||||||||||||||| |||||||||| ||||||||||    
T  17095993 gtttgttcacagattcatcctttttgtttttagcgaatttgaatttgtattgtatcgatgtactctatcaatttgaat 17095916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 108 - 184
Target Start/End: Original strand, 18654151 - 18654228
Alignment:
Q  108 gtttgttcgcaaatttaacctttttgtttttaacaactttgaatttgtattgtatcaatgtactcta-caatttgaat 184  Q
    |||||||| |||||||| |||||||||||||| | | |||| |||| ||||||||||||||| |||| ||||||||||    
T  18654151 gtttgttcacaaatttatcctttttgtttttagcgaatttggatttatattgtatcaatgtagtctatcaatttgaat 18654228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 108 - 184
Target Start/End: Original strand, 34431433 - 34431510
Alignment:
Q  108 gtttgttcgcaaatttaacctttttgtttttaacaactttgaatttgtattgtatcaatgtactcta-caatttgaat 184  Q
    |||||||| |||||| | |||||||||||||| | | |||| |||||||||||||| |||||||||| ||||||||||    
T  34431433 gtttgttcacaaattcatcctttttgtttttagcgaatttggatttgtattgtatcgatgtactctatcaatttgaat 34431510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 109 - 161
Target Start/End: Original strand, 12215488 - 12215540
Alignment:
Q  109 tttgttcgcaaatttaacctttttgtttttaacaactttgaatttgtattgta 161  Q
    ||||||| |||||||| ||||||| |||||||| |||||||||||||||||||    
T  12215488 tttgttcacaaatttatcctttttatttttaacgactttgaatttgtattgta 12215540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 126 - 184
Target Start/End: Original strand, 3740719 - 3740778
Alignment:
Q  126 cctttttgtttttaacaactttgaatttgtattgtatcaatgtactcta-caatttgaat 184  Q
    |||||||||||||| | | |||||||||| ||||||||||||||||||| ||||||||||    
T  3740719 cctttttgtttttagcgaatttgaatttggattgtatcaatgtactctatcaatttgaat 3740778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 16 - 107
Target Start/End: Complemental strand, 17523395 - 17523304
Alignment:
Q  16 tcaacgttgttgatccgaaaacatgagtattttagtggtttgaatataatcatatttgtagacgtatgtaatcttccgttttatgctattat 107  Q
    |||||||||  |||||||||||||||||||||  |||| ||||||||||| |||||  ||  | |||||| ||||||||||  |||||||||    
T  17523395 tcaacgttgcagatccgaaaacatgagtatttcggtggcttgaatataattatattcttaagcatatgtactcttccgtttgttgctattat 17523304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 31 - 106
Target Start/End: Complemental strand, 39532192 - 39532117
Alignment:
Q  31 cgaaaacatgagtattttagtggtttgaatataatcatatttgtagacgtatgtaatcttccgttttatgctatta 106  Q
    ||||||||| |||||||  |||| ||||||||| |||||||||||| | |||||| ||  ||||||||||||||||    
T  39532192 cgaaaacattagtatttcggtggcttgaatatagtcatatttgtaggcatatgtactcgaccgttttatgctatta 39532117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 108 - 174
Target Start/End: Complemental strand, 6681629 - 6681563
Alignment:
Q  108 gtttgttcgcaaatttaacctttttgtttttaacaactttgaatttgtattgtatcaatgtactcta 174  Q
    |||||||| || ||| | |||||||||||||| ||| |||| |||||||||||||| ||||||||||    
T  6681629 gtttgttcacagattcatcctttttgtttttagcaaatttggatttgtattgtatcgatgtactcta 6681563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 108 - 185
Target Start/End: Original strand, 42781370 - 42781448
Alignment:
Q  108 gtttgttcgcaaatttaacctttttgtttttaacaactttgaatttgtattgtatcaatgtactcta-caatttgaata 185  Q
    |||||||  |||||| | ||||||| |||||| | ||||||||||||||||||||| ||| |||||| |||||||||||    
T  42781370 gtttgttaacaaattcatcctttttatttttagcgactttgaatttgtattgtatcgatgcactctatcaatttgaata 42781448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 108 - 184
Target Start/End: Original strand, 6281413 - 6281490
Alignment:
Q  108 gtttgttcgcaaatttaacctttttgtttttaacaactttgaatttgtattgtatcaatgtactcta-caatttgaat 184  Q
    |||||||| || ||| | |||||||||||||| | | ||||||||||||||||||| || ||||||| ||||||||||    
T  6281413 gtttgttcacagattcatcctttttgtttttagcgaatttgaatttgtattgtatcgatatactctatcaatttgaat 6281490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 108 - 184
Target Start/End: Complemental strand, 11734597 - 11734520
Alignment:
Q  108 gtttgttcgcaaatttaacctttttgtttttaacaactttgaatttgtattgtatcaatgtactcta-caatttgaat 184  Q
    |||||||| || ||| | |||||||||||||| | | ||||||||||||||||||| ||||||| || ||||||||||    
T  11734597 gtttgttcacatattcatcctttttgtttttagcgaatttgaatttgtattgtatcgatgtactttatcaatttgaat 11734520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 108 - 184
Target Start/End: Original strand, 17331697 - 17331774
Alignment:
Q  108 gtttgttcgcaaatttaacctttttgtttttaacaactttgaatttgtattgtatcaatgtactcta-caatttgaat 184  Q
    |||||||| || ||| | |||||||||||||| | | |||| |||||||||||||| |||||||||| ||||||||||    
T  17331697 gtttgttcacagattcatcctttttgtttttagcgaatttggatttgtattgtatcgatgtactctatcaatttgaat 17331774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 108 - 184
Target Start/End: Original strand, 32309865 - 32309942
Alignment:
Q  108 gtttgttcgcaaatttaacctttttgtttttaacaactttgaatttgtattgtatcaatgtactcta-caatttgaat 184  Q
    ||||||||||| ||| | | ||||| |||||||| ||||||||||| |||| |||| |||||||||| ||||||||||    
T  32309865 gtttgttcgcagattcatcttttttatttttaacgactttgaatttatattatatcgatgtactctatcaatttgaat 32309942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 126 - 184
Target Start/End: Original strand, 28041016 - 28041075
Alignment:
Q  126 cctttttgtttttaacaactttgaatttgtattgtatcaatgtactcta-caatttgaat 184  Q
    |||||||||||||| ||| |||| |||||||||||||| || ||||||| ||||||||||    
T  28041016 cctttttgtttttagcaaatttggatttgtattgtatcgatatactctatcaatttgaat 28041075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 108 - 174
Target Start/End: Complemental strand, 6012813 - 6012747
Alignment:
Q  108 gtttgttcgcaaatttaacctttttgtttttaacaactttgaatttgtattgtatcaatgtactcta 174  Q
    ||||||| ||||||| |  | |||| |||||| | |||||||||||||||||||| |||||||||||    
T  6012813 gtttgtttgcaaattcattcattttatttttagcgactttgaatttgtattgtattaatgtactcta 6012747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 128 - 174
Target Start/End: Original strand, 11647573 - 11647619
Alignment:
Q  128 tttttgtttttaacaactttgaatttgtattgtatcaatgtactcta 174  Q
    |||||||||||| | ||||||||||||||||||||  ||||||||||    
T  11647573 tttttgtttttagcgactttgaatttgtattgtattgatgtactcta 11647619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 108 - 174
Target Start/End: Original strand, 26293979 - 26294045
Alignment:
Q  108 gtttgttcgcaaatttaacctttttgtttttaacaactttgaatttgtattgtatcaatgtactcta 174  Q
    |||||||| || ||| | |||||||||||||| | | ||||||||||||||||||| | ||||||||    
T  26293979 gtttgttcacatattcatcctttttgtttttagcgaatttgaatttgtattgtatcgacgtactcta 26294045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 108 - 184
Target Start/End: Complemental strand, 177856 - 177779
Alignment:
Q  108 gtttgttcgcaaatttaacctttttgtttttaacaactttgaatttgtattgtatcaatgtactcta-caatttgaat 184  Q
    |||||||| || ||| | |||||||||||||| | | |||| |||||||||||||| |||||||| | ||||||||||    
T  177856 gtttgttcacagattcatcctttttgtttttagcgaatttggatttgtattgtatcgatgtactccatcaatttgaat 177779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 129 - 174
Target Start/End: Original strand, 374637 - 374682
Alignment:
Q  129 ttttgtttttaacaactttgaatttgtattgtatcaatgtactcta 174  Q
    |||||||||||| || |||||||||||| | |||||||||||||||    
T  374637 ttttgtttttaaaaattttgaatttgtagtatatcaatgtactcta 374682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 121 - 174
Target Start/End: Complemental strand, 5169263 - 5169210
Alignment:
Q  121 tttaacctttttgtttttaacaactttgaatttgtattgtatcaatgtactcta 174  Q
    ||||| ||||||  ||||||| ||||| |||||||||||||||||| |||||||    
T  5169263 tttaatcttttttattttaacgactttaaatttgtattgtatcaatatactcta 5169210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 109 - 174
Target Start/End: Complemental strand, 39558254 - 39558189
Alignment:
Q  109 tttgttcgcaaatttaacctttttgtttttaacaactttgaatttgtattgtatcaatgtactcta 174  Q
    |||||| ||||||| |  ||||| ||||||| | |||||| ||||||||| |||||||||||||||    
T  39558254 tttgtttgcaaattcatacttttagtttttagcgactttggatttgtattatatcaatgtactcta 39558189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 129 - 173
Target Start/End: Complemental strand, 33164200 - 33164156
Alignment:
Q  129 ttttgtttttaacaactttgaatttgtattgtatcaatgtactct 173  Q
    ||||||||||| ||| |||||||||||||| |||| |||||||||    
T  33164200 ttttgtttttagcaaatttgaatttgtattatatcgatgtactct 33164156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 45; Significance: 2e-16; HSPs: 25)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 109 - 184
Target Start/End: Complemental strand, 25032854 - 25032778
Alignment:
Q  109 tttgttcgcaaatttaacctttttgtttttaacaactttgaatttgtattgtatcaatgtactcta-caatttgaat 184  Q
    |||||||||| ||| | |||||||||||||| | ||||||||||||||||||||| |||||||||| ||||||||||    
T  25032854 tttgttcgcagattcatcctttttgtttttagcgactttgaatttgtattgtatcgatgtactctatcaatttgaat 25032778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 126 - 183
Target Start/End: Original strand, 14265670 - 14265728
Alignment:
Q  126 cctttttgtttttaacaactttgaatttgtattgtatcaatgtactcta-caatttgaa 183  Q
    |||||||||||||| | | |||||||||||||||||||||||||||||| |||||||||    
T  14265670 cctttttgtttttagcgaatttgaatttgtattgtatcaatgtactctatcaatttgaa 14265728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 108 - 185
Target Start/End: Complemental strand, 28677891 - 28677813
Alignment:
Q  108 gtttgttcgcaaatttaacctttttgtttttaacaactttgaatttgtattgtatcaatgtactcta-caatttgaata 185  Q
    ||||||||||| ||| | |||||||||||||| | | |||| |||||||||||||| |||||||||| |||||||||||    
T  28677891 gtttgttcgcagattcatcctttttgtttttagcgaatttggatttgtattgtatcgatgtactctatcaatttgaata 28677813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 108 - 184
Target Start/End: Complemental strand, 33938796 - 33938719
Alignment:
Q  108 gtttgttcgcaaatttaacctttttgtttttaacaactttgaatttgtattgtatcaatgtactcta-caatttgaat 184  Q
    |||||||| |||||| | |||||||||||||| | | |||| |||||||||||||| |||||||||| ||||||||||    
T  33938796 gtttgttcacaaattcatcctttttgtttttagcgaatttggatttgtattgtatcgatgtactctatcaatttgaat 33938719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 108 - 183
Target Start/End: Original strand, 42276724 - 42276800
Alignment:
Q  108 gtttgttcgcaaatttaacctttttgtttttaacaactttgaatttgtattgtatcaatgtactcta-caatttgaa 183  Q
    |||||||| || ||| | ||||||| |||||| ||| ||||||||||||||||||| |||||||||| |||||||||    
T  42276724 gtttgttcacagattcatcctttttatttttagcaaatttgaatttgtattgtatcgatgtactctatcaatttgaa 42276800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 127 - 184
Target Start/End: Original strand, 27535085 - 27535143
Alignment:
Q  127 ctttttgtttttaacaactttgaatttgtattgtatcaatgtactcta-caatttgaat 184  Q
    ||||||||||||| | | ||||||||||||||||||| |||||||||| ||||||||||    
T  27535085 ctttttgtttttagcgaatttgaatttgtattgtatcgatgtactctatcaatttgaat 27535143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 129 - 163
Target Start/End: Original strand, 30678629 - 30678663
Alignment:
Q  129 ttttgtttttaacaactttgaatttgtattgtatc 163  Q
    |||||||||||||||||||||||||||||||||||    
T  30678629 ttttgtttttaacaactttgaatttgtattgtatc 30678663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 108 - 184
Target Start/End: Complemental strand, 13488288 - 13488211
Alignment:
Q  108 gtttgttcgcaaatttaacctttttgtttttaacaactttgaatttgtattgtatcaatgtactcta-caatttgaat 184  Q
    |||| ||| |||||||| | |||||||||||| | | |||| |||||||||||||| |||||||||| ||||||||||    
T  13488288 gtttattcacaaatttatcttttttgtttttagcgaatttggatttgtattgtatcgatgtactctatcaatttgaat 13488211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 128 - 184
Target Start/End: Original strand, 32784468 - 32784525
Alignment:
Q  128 tttttgtttttaacaactttgaatttgtattgtatcaatgtactcta-caatttgaat 184  Q
    |||||||||||| | | ||||||||||||||||||| |||||||||| ||||||||||    
T  32784468 tttttgtttttagcgaatttgaatttgtattgtatcgatgtactctatcaatttgaat 32784525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 128 - 184
Target Start/End: Complemental strand, 33486768 - 33486711
Alignment:
Q  128 tttttgtttttaacaactttgaatttgtattgtatcaatgtactcta-caatttgaat 184  Q
    |||||||||||||| | |||| |||||||||||||| |||||||||| ||||||||||    
T  33486768 tttttgtttttaacgaatttggatttgtattgtatcgatgtactctatcaatttgaat 33486711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 130 - 174
Target Start/End: Complemental strand, 10188620 - 10188576
Alignment:
Q  130 tttgtttttaacaactttgaatttgtattgtatcaatgtactcta 174  Q
    |||||||||| | ||||||||||||||||||| ||||||||||||    
T  10188620 tttgtttttagcgactttgaatttgtattgtaccaatgtactcta 10188576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 129 - 184
Target Start/End: Complemental strand, 25689584 - 25689528
Alignment:
Q  129 ttttgtttttaacaactttgaatttgtattgtatcaatgtactcta-caatttgaat 184  Q
    |||| |||||| | |||||||||||||||||||||||| ||||||| ||||||||||    
T  25689584 ttttatttttagcgactttgaatttgtattgtatcaatatactctatcaatttgaat 25689528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 111 - 171
Target Start/End: Original strand, 32879065 - 32879125
Alignment:
Q  111 tgttcgcaaatttaacctttttgtttttaacaactttgaatttgtattgtatcaatgtact 171  Q
    |||||||| ||||| ||||||| |||||| | |||||| |||||||||||||| |||||||    
T  32879065 tgttcgcagatttatcctttttatttttagcgactttggatttgtattgtatcgatgtact 32879125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 108 - 163
Target Start/End: Complemental strand, 11877214 - 11877159
Alignment:
Q  108 gtttgttcgcaaatttaacctttttgtttttaacaactttgaatttgtattgtatc 163  Q
    |||||||||||| || |  ||||||||||||||||||||||||| ||| |||||||    
T  11877214 gtttgttcgcaagttcattctttttgtttttaacaactttgaatatgtgttgtatc 11877159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 127 - 185
Target Start/End: Original strand, 12537907 - 12537966
Alignment:
Q  127 ctttttgtttttaacaactttgaatttgtattgtatcaatgtactcta-caatttgaata 185  Q
    ||||||||||||| |||||||| |||| ||||||||  |||||||||| |||||||||||    
T  12537907 ctttttgtttttagcaactttgcatttatattgtattgatgtactctatcaatttgaata 12537966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 126 - 184
Target Start/End: Original strand, 12871993 - 12872052
Alignment:
Q  126 cctttttgtttttaacaactttgaatttgtattgtatcaatgtactcta-caatttgaat 184  Q
    |||||||||||||| | | | || ||||||||||||||||||||||||| ||||||||||    
T  12871993 cctttttgtttttagcgaatatggatttgtattgtatcaatgtactctatcaatttgaat 12872052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 127 - 185
Target Start/End: Complemental strand, 15791009 - 15790950
Alignment:
Q  127 ctttttgtttttaacaactttgaatttgtattgtatcaatgtactcta-caatttgaata 185  Q
    ||||||||||||| | | ||||||||||||||||||| ||||||| || |||||||||||    
T  15791009 ctttttgtttttagcgaatttgaatttgtattgtatcgatgtactttatcaatttgaata 15790950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 111 - 174
Target Start/End: Original strand, 29938572 - 29938635
Alignment:
Q  111 tgttcgcaaatttaacctttttgtttttaacaactttgaatttgtattgtatcaatgtactcta 174  Q
    |||||||| ||| | ||||| | |||||| | ||||||||||||||||||||| ||||||||||    
T  29938572 tgttcgcagattcatcctttctatttttagcgactttgaatttgtattgtatcgatgtactcta 29938635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 108 - 162
Target Start/End: Complemental strand, 15312379 - 15312325
Alignment:
Q  108 gtttgttcgcaaatttaacctttttgtttttaacaactttgaatttgtattgtat 162  Q
    ||||||||||| ||| | ||||||| |||||||| |||||| |||||||||||||    
T  15312379 gtttgttcgcagattcatcctttttatttttaacgactttggatttgtattgtat 15312325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 108 - 174
Target Start/End: Complemental strand, 29551517 - 29551451
Alignment:
Q  108 gtttgttcgcaaatttaacctttttgtttttaacaactttgaatttgtattgtatcaatgtactcta 174  Q
    ||||||| ||| ||| | |||||||||||||| | |||||||| |||||||||||| ||||| ||||    
T  29551517 gtttgtttgcatattcatcctttttgtttttagcgactttgaaattgtattgtatcgatgtaatcta 29551451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 128 - 184
Target Start/End: Original strand, 10304952 - 10305009
Alignment:
Q  128 tttttgtttttaacaactttgaatttgtattgtatcaatgtactcta-caatttgaat 184  Q
    |||||||||||| ||| ||||||||| ||||||||| ||||| |||| ||||||||||    
T  10304952 tttttgtttttatcaattttgaatttatattgtatcgatgtaatctatcaatttgaat 10305009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 129 - 174
Target Start/End: Original strand, 16141001 - 16141046
Alignment:
Q  129 ttttgtttttaacaactttgaatttgtattgtatcaatgtactcta 174  Q
    ||||||||||||| | |||| |||||||||||||| ||||||||||    
T  16141001 ttttgtttttaacgaatttggatttgtattgtatcgatgtactcta 16141046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 126 - 174
Target Start/End: Complemental strand, 15390986 - 15390938
Alignment:
Q  126 cctttttgtttttaacaactttgaatttgtattgtatcaatgtactcta 174  Q
    |||||||||||||| | | |||| |||||||||||||| ||||||||||    
T  15390986 cctttttgtttttagcgaatttggatttgtattgtatcgatgtactcta 15390938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 108 - 160
Target Start/End: Original strand, 38783421 - 38783473
Alignment:
Q  108 gtttgttcgcaaatttaacctttttgtttttaacaactttgaatttgtattgt 160  Q
    ||||| ||||||||||| | ||||||||||||   ||||||||||||||||||    
T  38783421 gtttgctcgcaaatttatcatttttgtttttagagactttgaatttgtattgt 38783473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 108 - 183
Target Start/End: Original strand, 45750847 - 45750923
Alignment:
Q  108 gtttgttcgcaaatttaacctttttgtttttaacaactttgaatttgtattgtatcaatgtactcta-caatttgaa 183  Q
    ||||||||  ||||| | |||||||||||||| ||| |||| |||| ||||||||  |||||||||| |||||||||    
T  45750847 gtttgttcataaattcatcctttttgtttttagcaaatttggatttttattgtattgatgtactctatcaatttgaa 45750923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 32)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 16 - 106
Target Start/End: Original strand, 31724868 - 31724958
Alignment:
Q  16 tcaacgttgttgatccgaaaacatgagtattttagtggtttgaatataatcatatttgtagacgtatgtaatcttccgttttatgctatta 106  Q
    |||||||||  |||||||||||||||||||||| |||| || ||||||||||||||||||| | ||| || |||  ||||||||| |||||    
T  31724868 tcaacgttgaagatccgaaaacatgagtattttggtggcttaaatataatcatatttgtaggcatatttactctgtcgttttatgttatta 31724958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 16 - 85
Target Start/End: Original strand, 10624046 - 10624115
Alignment:
Q  16 tcaacgttgttgatccgaaaacatgagtattttagtggtttgaatataatcatatttgtagacgtatgta 85  Q
    |||||||||| ||| ||||||||||||||||||||||| ||||||| | || ||||||||||| ||||||    
T  10624046 tcaacgttgtagattcgaaaacatgagtattttagtggcttgaataaagtcgtatttgtagacatatgta 10624115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 126 - 184
Target Start/End: Original strand, 3266761 - 3266820
Alignment:
Q  126 cctttttgtttttaacaactttgaatttgtattgtatcaatgtactcta-caatttgaat 184  Q
    |||||||||||||||| | ||||||||||||||||||||||||||| || ||||||||||    
T  3266761 cctttttgtttttaacgaatttgaatttgtattgtatcaatgtactttatcaatttgaat 3266820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 108 - 173
Target Start/End: Original strand, 38273258 - 38273323
Alignment:
Q  108 gtttgttcgcaaatttaacctttttgtttttaacaactttgaatttgtattgtatcaatgtactct 173  Q
    ||||||| ||||||| | |||||||||||||||  |||||| |||| |||||||||||||||||||    
T  38273258 gtttgttagcaaattcatcctttttgtttttaaggactttggatttatattgtatcaatgtactct 38273323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 108 - 184
Target Start/End: Complemental strand, 39532727 - 39532650
Alignment:
Q  108 gtttgttcgcaaatttaacctttttgtttttaacaactttgaatttgtattgtatcaatgtactcta-caatttgaat 184  Q
    |||||||| || ||||| |||||||||||||| | | |||||||||||||||||||  ||||||||| ||||||||||    
T  39532727 gtttgttcacacatttatcctttttgtttttagcgaatttgaatttgtattgtatcggtgtactctatcaatttgaat 39532650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 126 - 184
Target Start/End: Complemental strand, 31254865 - 31254806
Alignment:
Q  126 cctttttgtttttaacaactttgaatttgtattgtatcaatgtactcta-caatttgaat 184  Q
    ||||||| |||||| ||||||||||||||||||||||| ||||| |||| ||||||||||    
T  31254865 cctttttatttttagcaactttgaatttgtattgtatcgatgtaatctatcaatttgaat 31254806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 126 - 184
Target Start/End: Original strand, 36253317 - 36253376
Alignment:
Q  126 cctttttgtttttaacaactttgaatttgtattgtatcaatgtactcta-caatttgaat 184  Q
    |||||||||||||| ||| |||| |||||||||||||| |||||||||| ||||||||||    
T  36253317 cctttttgtttttagcaaatttggatttgtattgtatcgatgtactctatcaatttgaat 36253376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 108 - 185
Target Start/End: Complemental strand, 28664708 - 28664630
Alignment:
Q  108 gtttgttcgcaaatttaacctttttgtttttaacaactttgaatttgtattgtatcaatgtactcta-caatttgaata 185  Q
    |||||||| |||||| | |||||||||||||| | | |||||||||| |||||||| ||||| |||| |||||||||||    
T  28664708 gtttgttcacaaattcatcctttttgtttttagcgaatttgaatttgcattgtatcgatgtaatctatcaatttgaata 28664630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 108 - 173
Target Start/End: Original strand, 5238303 - 5238368
Alignment:
Q  108 gtttgttcgcaaatttaacctttttgtttttaacaactttgaatttgtattgtatcaatgtactct 173  Q
    |||||||| |||||| | ||||||| |||||||| | ||||||||||||||||||  |||||||||    
T  5238303 gtttgttctcaaattcatcctttttatttttaacgattttgaatttgtattgtatggatgtactct 5238368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 109 - 174
Target Start/End: Complemental strand, 7765629 - 7765564
Alignment:
Q  109 tttgttcgcaaatttaacctttttgtttttaacaactttgaatttgtattgtatcaatgtactcta 174  Q
    |||||||||| ||||| ||| ||| ||||||   ||||||||||||||||||||| ||||||||||    
T  7765629 tttgttcgcatatttatcctatttatttttagatactttgaatttgtattgtatcgatgtactcta 7765564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 108 - 184
Target Start/End: Original strand, 9137310 - 9137387
Alignment:
Q  108 gtttgttcgcaaatttaacctttttgtttttaacaactttgaatttgtattgtatcaatgtactcta-caatttgaat 184  Q
    ||||||||| ||||| | |||||||||||||| |||||||||||||||| ||  || ||| |||||| ||||||||||    
T  9137310 gtttgttcgtaaattcatcctttttgtttttagcaactttgaatttgtactgggtcgatgcactctatcaatttgaat 9137387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 108 - 184
Target Start/End: Original strand, 10094809 - 10094886
Alignment:
Q  108 gtttgttcgcaaatttaacctttttgtttttaacaactttgaatttgtattgtatcaatgtactcta-caatttgaat 184  Q
    |||||||| || ||| | |||||||||||||| ||| ||||||||| |||||||| ||| ||||||| ||||||||||    
T  10094809 gtttgttcacagattcatcctttttgtttttagcaaatttgaatttctattgtattaatatactctatcaatttgaat 10094886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 108 - 184
Target Start/End: Original strand, 21991031 - 21991108
Alignment:
Q  108 gtttgttcgcaaatttaacctttttgtttttaacaactttgaatttgtattgtatcaatgtactcta-caatttgaat 184  Q
    |||||||| || ||| | |||||||||||||| | | |||| |||||||||||||| |||||||||| ||||||||||    
T  21991031 gtttgttcacatattcatcctttttgtttttagcgaatttggatttgtattgtatcgatgtactctatcaatttgaat 21991108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 28 - 105
Target Start/End: Original strand, 37714739 - 37714816
Alignment:
Q  28 atccgaaaacatgagtattttagtggtttgaatataatcatatttgtagacgtatgtaatcttccgttttatgctatt 105  Q
    ||||||||||||||||||||  ||||| |||||||| |||||||||||| | ||| || ||||  |||||||| ||||    
T  37714739 atccgaaaacatgagtatttcggtggtgtgaatatagtcatatttgtaggcatatatactcttttgttttatgttatt 37714816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 108 - 184
Target Start/End: Original strand, 41288325 - 41288402
Alignment:
Q  108 gtttgttcgcaaatttaacctttttgtttttaacaactttgaatttgtattgtatcaatgtactcta-caatttgaat 184  Q
    |||||||| || ||| | ||||||||||||||   | ||||||||||||||||||| |||||||||| ||||||||||    
T  41288325 gtttgttcacagattcatcctttttgtttttagtgaatttgaatttgtattgtatcgatgtactctatcaatttgaat 41288402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 38 - 106
Target Start/End: Complemental strand, 6646445 - 6646377
Alignment:
Q  38 atgagtattttagtggtttgaatataatcatatttgtagacgtatgtaatcttccgttttatgctatta 106  Q
    ||||||||||  || ||||||||||| |||||||||||| | |||||| ||| || |||||||||||||    
T  6646445 atgagtatttcggtagtttgaatatagtcatatttgtaggcatatgtactctaccattttatgctatta 6646377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 127 - 163
Target Start/End: Complemental strand, 38338916 - 38338880
Alignment:
Q  127 ctttttgtttttaacaactttgaatttgtattgtatc 163  Q
    ||||||||||||||||||||||||||| |||||||||    
T  38338916 ctttttgtttttaacaactttgaatttatattgtatc 38338880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 126 - 184
Target Start/End: Complemental strand, 4621114 - 4621055
Alignment:
Q  126 cctttttgtttttaacaactttgaatttgtattgtatcaatgtactcta-caatttgaat 184  Q
    |||||||||||||||| | |||| ||||| |||||||| |||||||||| ||||||||||    
T  4621114 cctttttgtttttaacgaatttggatttgaattgtatcgatgtactctatcaatttgaat 4621055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 126 - 184
Target Start/End: Original strand, 6667782 - 6667841
Alignment:
Q  126 cctttttgtttttaacaactttgaatttgtattgtatcaatgtactcta-caatttgaat 184  Q
    |||||||||||||| | | ||||||||||||||||||| |||| ||||| ||||||||||    
T  6667782 cctttttgtttttagcgaatttgaatttgtattgtatcgatgtgctctatcaatttgaat 6667841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 126 - 184
Target Start/End: Complemental strand, 22747243 - 22747184
Alignment:
Q  126 cctttttgtttttaacaactttgaatttgtattgtatcaatgtactcta-caatttgaat 184  Q
    ||||||||||||||  || ||||||||| ||||||||| |||||||||| ||||||||||    
T  22747243 cctttttgtttttagtaaatttgaatttatattgtatcgatgtactctatcaatttgaat 22747184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 108 - 166
Target Start/End: Complemental strand, 33902080 - 33902021
Alignment:
Q  108 gtttgttcgcaaatttaacctttttgtttttaac-aactttgaatttgtattgtatcaat 166  Q
    |||| |||||||||| | |||||||||||||||| | |||||||| ||||||||||||||    
T  33902080 gtttattcgcaaattaatcctttttgtttttaacgacctttgaatgtgtattgtatcaat 33902021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 108 - 185
Target Start/End: Complemental strand, 1280889 - 1280811
Alignment:
Q  108 gtttgttcgcaaatttaacctttttgtttttaacaactttgaatttgtattgtatcaatgtactcta-caatttgaata 185  Q
    |||||||| || ||| | |||||||||||||| | | |||| ||||||||| |||| |||||||||| |||||||||||    
T  1280889 gtttgttcacagattcatcctttttgtttttagcgaatttggatttgtattatatcgatgtactctatcaatttgaata 1280811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 128 - 184
Target Start/End: Original strand, 8180190 - 8180247
Alignment:
Q  128 tttttgtttttaacaactttgaatttgtattgtatcaatgtactcta-caatttgaat 184  Q
    |||||||||||| | | |||| ||||||||||||| ||||||||||| ||||||||||    
T  8180190 tttttgtttttagcgaatttggatttgtattgtatgaatgtactctatcaatttgaat 8180247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 129 - 170
Target Start/End: Original strand, 10624172 - 10624213
Alignment:
Q  129 ttttgtttttaacaactttgaatttgtattgtatcaatgtac 170  Q
    ||||||||||||||||||| ||||||| ||||||| ||||||    
T  10624172 ttttgtttttaacaacttttaatttgtcttgtatcgatgtac 10624213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 108 - 184
Target Start/End: Original strand, 11833387 - 11833464
Alignment:
Q  108 gtttgttcgcaaatttaacctttttgtttttaacaactttgaatttgtattgtatcaatgtactcta-caatttgaat 184  Q
    |||||||| || ||| | |||||||||||||| | | |  |||||||||||||||| |||||||||| ||||||||||    
T  11833387 gtttgttcacagattcatcctttttgtttttagcgaatgcgaatttgtattgtatcgatgtactctatcaatttgaat 11833464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 126 - 171
Target Start/End: Complemental strand, 14657655 - 14657610
Alignment:
Q  126 cctttttgtttttaacaactttgaatttgtattgtatcaatgtact 171  Q
    |||||||||||||| | | |||||| ||||||||||||||||||||    
T  14657655 cctttttgtttttagcgaatttgaaattgtattgtatcaatgtact 14657610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 108 - 184
Target Start/End: Original strand, 21603827 - 21603904
Alignment:
Q  108 gtttgttcgcaaatttaacctttttgtttttaacaactttgaatttgtattgtatcaatgtactcta-caatttgaat 184  Q
    |||||||| || ||| | ||||||| |||||||  | ||||||||||||||||||  |||||||||| ||||||||||    
T  21603827 gtttgttcacagattcaccctttttctttttaatgaatttgaatttgtattgtattgatgtactctatcaatttgaat 21603904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 109 - 166
Target Start/End: Original strand, 22493335 - 22493392
Alignment:
Q  109 tttgttcgcaaatttaacctttttgtttttaacaactttgaatttgtattgtatcaat 166  Q
    |||||||||  ||| | |||||||||||||| | ||||||||||||| ||||||||||    
T  22493335 tttgttcgcgcattcatcctttttgtttttagcgactttgaatttgtgttgtatcaat 22493392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 108 - 184
Target Start/End: Complemental strand, 42603531 - 42603454
Alignment:
Q  108 gtttgttcgcaaatttaacctttttgtttttaacaactttgaatttgtattgtatcaatgtactcta-caatttgaat 184  Q
    |||||||| || ||| | || ||||||||||| | | ||||||||| ||||||||| |||||||||| ||||||||||    
T  42603531 gtttgttcacagattcatccgttttgtttttagcgaatttgaatttatattgtatcgatgtactctatcaatttgaat 42603454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 108 - 184
Target Start/End: Complemental strand, 45457308 - 45457231
Alignment:
Q  108 gtttgttcgcaaatttaacctttttgtttttaacaactttgaatttgtattgtatcaatgtactcta-caatttgaat 184  Q
    |||||||| || ||| | |||||||||||||| | | |||||||||||| ||| || |||||||||| ||||||||||    
T  45457308 gtttgttcacagattcatcctttttgtttttagcgaatttgaatttgtactgtgtcgatgtactctatcaatttgaat 45457231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 108 - 183
Target Start/End: Complemental strand, 36579093 - 36579017
Alignment:
Q  108 gtttgttcgcaaatttaacctttttgtttttaacaactttgaatttgtattgtatcaatgtactcta-caatttgaa 183  Q
    |||||||| || ||| | |||||||||||||| | | ||||||||| |||| ||| ||||||||||| |||||||||    
T  36579093 gtttgttcacagattcatcctttttgtttttagcgaatttgaatttatattatattaatgtactctatcaatttgaa 36579017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 108 - 168
Target Start/End: Original strand, 37714833 - 37714893
Alignment:
Q  108 gtttgttcgcaaatttaacctttttgtttttaacaactttgaatttgtattgtatcaatgt 168  Q
    ||||||||||| ||| | | ||||| |||||   |||||||||||||||||||||||||||    
T  37714833 gtttgttcgcatattcatcttttttatttttcttaactttgaatttgtattgtatcaatgt 37714893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 30)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 108 - 184
Target Start/End: Complemental strand, 28261657 - 28261580
Alignment:
Q  108 gtttgttcgcaaatttaacctttttgtttttaacaactttgaatttgtattgtatcaatgtactcta-caatttgaat 184  Q
    |||||||| |||||||| |||||||||||||| | | |||| |||||||||||||| |||||||||| ||||||||||    
T  28261657 gtttgttcacaaatttatcctttttgtttttatcgaatttggatttgtattgtatcgatgtactctatcaatttgaat 28261580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 108 - 184
Target Start/End: Original strand, 41797964 - 41798040
Alignment:
Q  108 gtttgttcgcaaatttaacctttttgtttttaacaactttgaatttgtattgtatcaatgtactctacaatttgaat 184  Q
    |||||||| || ||| | |||||||||||||| ||| ||| ||||||||||||||||||| |||||| |||||||||    
T  41797964 gtttgttcacagattcatcctttttgtttttagcaaatttaaatttgtattgtatcaatgaactctataatttgaat 41798040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 127 - 184
Target Start/End: Original strand, 29543181 - 29543239
Alignment:
Q  127 ctttttgtttttaacaactttgaatttgtattgtatcaatgtactcta-caatttgaat 184  Q
    ||||||||||||| ||| ||||||||||||||||||| |||||||||| ||||||||||    
T  29543181 ctttttgtttttagcaaatttgaatttgtattgtatcgatgtactctatcaatttgaat 29543239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 16 - 85
Target Start/End: Complemental strand, 2763394 - 2763325
Alignment:
Q  16 tcaacgttgttgatccgaaaacatgagtattttagtggtttgaatataatcatatttgtagacgtatgta 85  Q
    |||||||||  |||||||| ||||||||||||||| | ||||||||||||||||||| ||| | ||||||    
T  2763394 tcaacgttgcagatccgaagacatgagtattttagagatttgaatataatcatatttataggcatatgta 2763325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 16 - 85
Target Start/End: Complemental strand, 11581003 - 11580934
Alignment:
Q  16 tcaacgttgttgatccgaaaacatgagtattttagtggtttgaatataatcatatttgtagacgtatgta 85  Q
    |||||||||  |||||| |||||||||||||| ||||| ||||||||  |||||||||||||| ||||||    
T  11581003 tcaacgttgcagatccggaaacatgagtatttaagtggcttgaatatggtcatatttgtagacatatgta 11580934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 108 - 184
Target Start/End: Original strand, 33012417 - 33012494
Alignment:
Q  108 gtttgttcgcaaatttaacctttttgtttttaacaactttgaatttgtattgtatcaatgtactcta-caatttgaat 184  Q
    |||||||| |||||| | |||||||||||||| | | ||| ||||||||||||||| |||||||||| ||||||||||    
T  33012417 gtttgttcacaaattcatcctttttgtttttagcgaatttaaatttgtattgtatcgatgtactctatcaatttgaat 33012494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 108 - 184
Target Start/End: Original strand, 44589241 - 44589318
Alignment:
Q  108 gtttgttcgcaaatttaacctttttgtttttaacaactttgaatttgtattgtatcaatgtactcta-caatttgaat 184  Q
    |||||||| |||||||| |||||||||||||| | | ||||||||||||||||||| || || |||| ||||||||||    
T  44589241 gtttgttcacaaatttatcctttttgtttttagcgaatttgaatttgtattgtatcgatttattctatcaatttgaat 44589318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 27 - 106
Target Start/End: Original strand, 17792732 - 17792811
Alignment:
Q  27 gatccgaaaacatgagtattttagtggtttgaatataatcatatttgtagacgtatgtaatcttccgttttatgctatta 106  Q
    ||||||||||||||||||||| ||||| ||| ||||| |||||||||||| | ||| || ||| |  |||||||||||||    
T  17792732 gatccgaaaacatgagtatttcagtggcttgtatatagtcatatttgtaggcatatatactctactattttatgctatta 17792811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 126 - 184
Target Start/End: Complemental strand, 28230831 - 28230772
Alignment:
Q  126 cctttttgtttttaacaactttgaatttgtattgtatcaatgtactct-acaatttgaat 184  Q
    |||||||||||||| | | ||||||||||||||||||| ||||||||| |||||||||||    
T  28230831 cctttttgtttttagcgaatttgaatttgtattgtatcgatgtactctaacaatttgaat 28230772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 108 - 173
Target Start/End: Original strand, 4703500 - 4703565
Alignment:
Q  108 gtttgttcgcaaatttaacctttttgtttttaacaactttgaatttgtattgtatcaatgtactct 173  Q
    ||||||| | ||||| | |||||||||||||  | ||||||||||||||||||||| |||||||||    
T  4703500 gtttgtttgaaaattcatcctttttgtttttggcgactttgaatttgtattgtatcgatgtactct 4703565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 108 - 184
Target Start/End: Original strand, 4739698 - 4739775
Alignment:
Q  108 gtttgttcgcaaatttaacctttttgtttttaacaactttgaatttgtattgtatcaatgtactcta-caatttgaat 184  Q
    |||||||| || ||| | |||||||||||||| | | |||| |||||||||||||| |||||||||| ||||||||||    
T  4739698 gtttgttcacagattcatcctttttgtttttagcgaatttggatttgtattgtatcgatgtactctatcaatttgaat 4739775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 108 - 184
Target Start/End: Complemental strand, 12890869 - 12890792
Alignment:
Q  108 gtttgttcgcaaatttaacctttttgtttttaacaactttgaatttgtattgtatcaatgtactcta-caatttgaat 184  Q
    |||||||| || ||| | |||||||||||||| | | |||| |||||||||||||| |||||||||| ||||||||||    
T  12890869 gtttgttcacagattcatcctttttgtttttagcgaatttggatttgtattgtatcgatgtactctatcaatttgaat 12890792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 108 - 184
Target Start/End: Complemental strand, 20560885 - 20560808
Alignment:
Q  108 gtttgttcgcaaatttaacctttttgtttttaacaactttgaatttgtattgtatcaatgtactcta-caatttgaat 184  Q
    |||||||| || ||| | |||||||||||||| | | |||| |||||||||||||| |||||||||| ||||||||||    
T  20560885 gtttgttcacagattcatcctttttgtttttagcgaatttggatttgtattgtatcgatgtactctatcaatttgaat 20560808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 108 - 184
Target Start/End: Original strand, 25068210 - 25068287
Alignment:
Q  108 gtttgttcgcaaatttaacctttttgtttttaacaactttgaatttgtattgtatcaatgtactcta-caatttgaat 184  Q
    |||||||| || ||| | |||||||||||||| | | |||| |||||||||||||| |||||||||| ||||||||||    
T  25068210 gtttgttcacagattcatcctttttgtttttagcgaatttggatttgtattgtatcgatgtactctatcaatttgaat 25068287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 128 - 184
Target Start/End: Original strand, 35333894 - 35333951
Alignment:
Q  128 tttttgtttttaacaactttgaatttgtattgtatcaatgtactcta-caatttgaat 184  Q
    |||||||||||||| | |||| |||||||||||||| |||||||||| ||||||||||    
T  35333894 tttttgtttttaacgaatttggatttgtattgtatcgatgtactctatcaatttgaat 35333951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 129 - 184
Target Start/End: Complemental strand, 7071506 - 7071450
Alignment:
Q  129 ttttgtttttaacaactttgaatttgtattgtatcaatgtactcta-caatttgaat 184  Q
    ||||||||||| | | |||| ||||||||||||||||||||||||| ||||||||||    
T  7071506 ttttgtttttagcgaatttggatttgtattgtatcaatgtactctatcaatttgaat 7071450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 126 - 185
Target Start/End: Complemental strand, 17267860 - 17267800
Alignment:
Q  126 cctttttgtttttaacaactttgaatttgtattgtatcaatgtactcta-caatttgaata 185  Q
    ||||||||||||||   | |||| ||||||||||||||||||||||||| |||||||||||    
T  17267860 cctttttgtttttagtgaatttggatttgtattgtatcaatgtactctatcaatttgaata 17267800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 108 - 184
Target Start/End: Original strand, 5754651 - 5754728
Alignment:
Q  108 gtttgttcgcaaatttaacctttttgtttttaacaactttgaatttgtattgtatcaatgtactcta-caatttgaat 184  Q
    |||||||| || ||| | |||||||||||||| | | |||||||||||||| |||| ||||| |||| ||||||||||    
T  5754651 gtttgttcacatattcatcctttttgtttttagcgaatttgaatttgtattatatcgatgtattctatcaatttgaat 5754728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 108 - 184
Target Start/End: Complemental strand, 10286766 - 10286689
Alignment:
Q  108 gtttgttcgcaaatttaacctttttgtttttaacaactttgaatttgtattgtatcaatgtactcta-caatttgaat 184  Q
    |||||||| |||||| | | |||||||||||| ||| |||| |||| ||||||||  |||||||||| ||||||||||    
T  10286766 gtttgttcacaaattcatcatttttgtttttagcaaatttggatttctattgtattgatgtactctatcaatttgaat 10286689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 108 - 157
Target Start/End: Complemental strand, 11561439 - 11561390
Alignment:
Q  108 gtttgttcgcaaatttaacctttttgtttttaacaactttgaatttgtat 157  Q
    ||||||||||| ||| | ||||||| |||||| |||||||||||||||||    
T  11561439 gtttgttcgcagattcatcctttttatttttagcaactttgaatttgtat 11561390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 128 - 184
Target Start/End: Original strand, 12705075 - 12705132
Alignment:
Q  128 tttttgtttttaacaactttgaatttgtattgtatcaatgtactcta-caatttgaat 184  Q
    |||||||||||| | | |||| |||||||||||||| |||||||||| ||||||||||    
T  12705075 tttttgtttttagcgaatttggatttgtattgtatcgatgtactctatcaatttgaat 12705132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 108 - 184
Target Start/End: Complemental strand, 13878761 - 13878684
Alignment:
Q  108 gtttgttcgcaaatttaacctttttgtttttaacaactttgaatttgtattgtatcaatgtactcta-caatttgaat 184  Q
    |||||||| || ||| | |||||||||||||| | | |||  |||||||||||||| |||||||||| ||||||||||    
T  13878761 gtttgttcacagattcatcctttttgtttttagcgaattttgatttgtattgtatcgatgtactctatcaatttgaat 13878684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 108 - 184
Target Start/End: Complemental strand, 14018886 - 14018809
Alignment:
Q  108 gtttgttcgcaaatttaacctttttgtttttaacaactttgaatttgtattgtatcaatgtactcta-caatttgaat 184  Q
    |||||||| || ||| | |||||||||||||| | | |||  |||||||||||||| |||||||||| ||||||||||    
T  14018886 gtttgttcacagattcatcctttttgtttttagcgaattttgatttgtattgtatcgatgtactctatcaatttgaat 14018809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 136 - 184
Target Start/End: Original strand, 17792854 - 17792903
Alignment:
Q  136 tttaacaactttgaatttgtattgtatcaatgtactcta-caatttgaat 184  Q
    |||||| ||||||||||||||||||||| ||||||| || ||||||||||    
T  17792854 tttaacgactttgaatttgtattgtatcgatgtactttatcaatttgaat 17792903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 108 - 184
Target Start/End: Complemental strand, 18089164 - 18089087
Alignment:
Q  108 gtttgttcgcaaatttaacctttttgtttttaacaactttgaatttgtattgtatcaatgtactcta-caatttgaat 184  Q
    |||||||| || ||| | |||||||||||||| | | |||| |||||||||||||| ||||||| || ||||||||||    
T  18089164 gtttgttcacagattcatcctttttgtttttagcgaatttggatttgtattgtatcgatgtactatatcaatttgaat 18089087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 108 - 169
Target Start/End: Original strand, 20570327 - 20570388
Alignment:
Q  108 gtttgttcgcaaatttaacctttttgtttttaacaactttgaatttgtattgtatcaatgta 169  Q
    ||||||||||| ||| | | |||||||||||| | | |||||||||| ||||||||||||||    
T  20570327 gtttgttcgcatattcatcatttttgtttttagcgattttgaatttgaattgtatcaatgta 20570388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 108 - 184
Target Start/End: Original strand, 27096058 - 27096135
Alignment:
Q  108 gtttgttcgcaaatttaacctttttgtttttaacaactttgaatttgtattgtatcaatgtactcta-caatttgaat 184  Q
    |||||||| || ||| | ||||||||||||||   | ||||||||||||||||||| |||||||| | ||||||||||    
T  27096058 gtttgttcacagattcatcctttttgtttttagtgaatttgaatttgtattgtatctatgtactccatcaatttgaat 27096135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 32 - 85
Target Start/End: Original strand, 27665814 - 27665867
Alignment:
Q  32 gaaaacatgagtattttagtggtttgaatataatcatatttgtagacgtatgta 85  Q
    |||||| |||||||||| |||| ||||||||| |||||||||||| | ||||||    
T  27665814 gaaaacctgagtattttggtggcttgaatatagtcatatttgtaggcatatgta 27665867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 19 - 76
Target Start/End: Original strand, 28228473 - 28228530
Alignment:
Q  19 acgttgttgatccgaaaacatgagtattttagtggtttgaatataatcatatttgtag 76  Q
    ||||||| |||||||| |||||||||||| || || ||||||||| |||||| |||||    
T  28228473 acgttgtagatccgaagacatgagtatttcagaggcttgaatatagtcatatgtgtag 28228530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 126 - 174
Target Start/End: Complemental strand, 11937600 - 11937552
Alignment:
Q  126 cctttttgtttttaacaactttgaatttgtattgtatcaatgtactcta 174  Q
    |||||||||||||| | |  |||||||||||||||||| ||||||||||    
T  11937600 cctttttgtttttagcgaaattgaatttgtattgtatcgatgtactcta 11937552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 39; Significance: 0.0000000000009; HSPs: 22)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 108 - 174
Target Start/End: Complemental strand, 13575969 - 13575903
Alignment:
Q  108 gtttgttcgcaaatttaacctttttgtttttaacaactttgaatttgtattgtatcaatgtactcta 174  Q
    ||||||||||||||| | |||||||||||||| | |||||| || ||||||||||| ||||||||||    
T  13575969 gtttgttcgcaaattcatcctttttgtttttagcgactttggatatgtattgtatcgatgtactcta 13575903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 108 - 185
Target Start/End: Complemental strand, 32778732 - 32778654
Alignment:
Q  108 gtttgttcgcaaatttaacctttttgtttttaacaactttgaatttgtattgtatcaatgtactcta-caatttgaata 185  Q
    ||||||||||||||| | | |||||||||||| | |||||| ||||| |||||||| |||||||||| |||||||||||    
T  32778732 gtttgttcgcaaattcatcatttttgtttttagcgactttggatttgaattgtatcgatgtactctatcaatttgaata 32778654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 108 - 184
Target Start/End: Complemental strand, 28296875 - 28296798
Alignment:
Q  108 gtttgttcgcaaatttaacctttttgtttttaacaactttgaatttgtattgtatcaatgtactcta-caatttgaat 184  Q
    |||||||| || ||| |||||||||||||||| | | |||| |||||||||||||| |||||||||| ||||||||||    
T  28296875 gtttgttcacagattcaacctttttgtttttagcgaatttggatttgtattgtatcgatgtactctatcaatttgaat 28296798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 108 - 184
Target Start/End: Original strand, 37613005 - 37613082
Alignment:
Q  108 gtttgttcgcaaatttaacctttttgtttttaacaactttgaatttgtattgtatcaatgtactcta-caatttgaat 184  Q
    |||||||| || ||| | |||||||||||||||| | ||||||||||||||||||| || ||||||| ||||||||||    
T  37613005 gtttgttcacagattcatcctttttgtttttaacgaatttgaatttgtattgtatcgatatactctatcaatttgaat 37613082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 108 - 166
Target Start/End: Original strand, 21471915 - 21471973
Alignment:
Q  108 gtttgttcgcaaatttaacctttttgtttttaacaactttgaatttgtattgtatcaat 166  Q
    ||||||||||| ||| | ||||| ||||||||  |||||||||||||||||||||||||    
T  21471915 gtttgttcgcagattcatcctttctgtttttagaaactttgaatttgtattgtatcaat 21471973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 127 - 184
Target Start/End: Original strand, 24210628 - 24210686
Alignment:
Q  127 ctttttgtttttaacaactttgaatttgtattgtatcaatgtactcta-caatttgaat 184  Q
    ||||||||||||| ||| ||||||||| ||||||||| |||||||||| ||||||||||    
T  24210628 ctttttgtttttagcaaatttgaatttttattgtatcgatgtactctatcaatttgaat 24210686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 127 - 184
Target Start/End: Complemental strand, 31407492 - 31407434
Alignment:
Q  127 ctttttgtttttaacaactttgaatttgtattgtatcaatgtactcta-caatttgaat 184  Q
    ||||||||||||| | | ||||||||||||||||||||||||||| || ||||||||||    
T  31407492 ctttttgtttttagcgaatttgaatttgtattgtatcaatgtactatatcaatttgaat 31407434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 108 - 184
Target Start/End: Original strand, 4757517 - 4757594
Alignment:
Q  108 gtttgttcgcaaatttaacctttttgtttttaacaactttgaatttgtattgtatcaatgtactcta-caatttgaat 184  Q
    |||||||| || ||| | |||||||||||||| | | |||  ||||||||||||||||||||||||| ||||||||||    
T  4757517 gtttgttcacatattcatcctttttgtttttagcgaatttagatttgtattgtatcaatgtactctatcaatttgaat 4757594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 108 - 184
Target Start/End: Complemental strand, 30026642 - 30026565
Alignment:
Q  108 gtttgttcgcaaatttaacctttttgtttttaacaactttgaatttgtattgtatcaatgtactcta-caatttgaat 184  Q
    |||||||| || ||| | ||||||| |||||| | | |||||||||||||||||||||| ||||||| ||||||||||    
T  30026642 gtttgttcacagattcatcctttttatttttagcgaatttgaatttgtattgtatcaatatactctatcaatttgaat 30026565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 133 - 184
Target Start/End: Original strand, 2968909 - 2968961
Alignment:
Q  133 gtttttaacaactttgaatttgtattgtatcaatgtactcta-caatttgaat 184  Q
    ||||||||| ||||||||| ||||||||||| |||||||||| ||||||||||    
T  2968909 gtttttaacgactttgaatatgtattgtatcgatgtactctatcaatttgaat 2968961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 27 - 75
Target Start/End: Original strand, 42261191 - 42261239
Alignment:
Q  27 gatccgaaaacatgagtattttagtggtttgaatataatcatatttgta 75  Q
    |||||||||||||||||| |||  ||| |||||||||||||||||||||    
T  42261191 gatccgaaaacatgagtactttgatggcttgaatataatcatatttgta 42261239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 126 - 184
Target Start/End: Complemental strand, 2234212 - 2234153
Alignment:
Q  126 cctttttgtttttaacaactttgaatttgtattgtatcaatgtactcta-caatttgaat 184  Q
    |||||||||||||| | | |||||||||||||| |||| |||||||||| ||||||||||    
T  2234212 cctttttgtttttagcgaatttgaatttgtattatatcgatgtactctatcaatttgaat 2234153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 128 - 159
Target Start/End: Complemental strand, 41431336 - 41431305
Alignment:
Q  128 tttttgtttttaacaactttgaatttgtattg 159  Q
    ||||||||||||||||||||||||||||||||    
T  41431336 tttttgtttttaacaactttgaatttgtattg 41431305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 128 - 174
Target Start/End: Original strand, 4928302 - 4928348
Alignment:
Q  128 tttttgtttttaacaactttgaatttgtattgtatcaatgtactcta 174  Q
    |||||||||||||| |||||||||||||||| |||  ||||||||||    
T  4928302 tttttgtttttaacgactttgaatttgtattatattgatgtactcta 4928348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 127 - 184
Target Start/End: Original strand, 9501956 - 9502014
Alignment:
Q  127 ctttttgtttttaacaactttgaatttgtattgtatcaatgtactcta-caatttgaat 184  Q
    ||||||||||||| | |  |||||||||||||||||| |||||||||| ||||||||||    
T  9501956 ctttttgtttttagcgaacttgaatttgtattgtatcgatgtactctatcaatttgaat 9502014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 128 - 174
Target Start/End: Complemental strand, 13570507 - 13570461
Alignment:
Q  128 tttttgtttttaacaactttgaatttgtattgtatcaatgtactcta 174  Q
    |||||||||||||||| ||| ||||||||||||||| || |||||||    
T  13570507 tttttgtttttaacaaatttaaatttgtattgtatcgatatactcta 13570461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 145 - 174
Target Start/End: Original strand, 9627835 - 9627864
Alignment:
Q  145 tttgaatttgtattgtatcaatgtactcta 174  Q
    ||||||||||||||||||||||||||||||    
T  9627835 tttgaatttgtattgtatcaatgtactcta 9627864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 127 - 183
Target Start/End: Original strand, 9802044 - 9802101
Alignment:
Q  127 ctttttgtttttaacaactttgaatttgtattgtatcaatgtactcta-caatttgaa 183  Q
    |||||||||||||   ||||||||||||||||||||| |||||| ||| |||||||||    
T  9802044 ctttttgtttttagtgactttgaatttgtattgtatcgatgtaccctaccaatttgaa 9802101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 129 - 184
Target Start/End: Original strand, 10334866 - 10334922
Alignment:
Q  129 ttttgtttttaacaactttgaatttgtattgtatcaatgtactcta-caatttgaat 184  Q
    ||||||||||| | | |||||||||  ||||||||||||||||||| ||||||||||    
T  10334866 ttttgtttttagcgaatttgaatttacattgtatcaatgtactctatcaatttgaat 10334922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 126 - 174
Target Start/End: Complemental strand, 14600440 - 14600392
Alignment:
Q  126 cctttttgtttttaacaactttgaatttgtattgtatcaatgtactcta 174  Q
    |||||||||||||| | | ||| ||||||||||||||| ||||||||||    
T  14600440 cctttttgtttttagcgaatttaaatttgtattgtatcgatgtactcta 14600392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 126 - 174
Target Start/End: Original strand, 24700222 - 24700270
Alignment:
Q  126 cctttttgtttttaacaactttgaatttgtattgtatcaatgtactcta 174  Q
    |||||||||||||| | | |||||||||| |||||||| ||||||||||    
T  24700222 cctttttgtttttagcgaatttgaatttgaattgtatcgatgtactcta 24700270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 12 - 76
Target Start/End: Complemental strand, 26046478 - 26046414
Alignment:
Q  12 atcatcaacgttgttgatccgaaaacatgagtattttagtggtttgaatataatcatatttgtag 76  Q
    ||||||||||||||  || |||||| ||||||||||  |||| |||||||||  |||||||||||    
T  26046478 atcatcaacgttgtaaattcgaaaatatgagtatttcggtggcttgaatatagacatatttgtag 26046414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0321 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 108 - 183
Target Start/End: Complemental strand, 6882 - 6806
Alignment:
Q  108 gtttgttcgcaaatttaacctttttgtttttaacaactttgaatttgtattgtatcaatgtactcta-caatttgaa 183  Q
    |||||||| || ||| | |||||||||||||| | | ||||||||||||||||||| |||||||||| |||||||||    
T  6882 gtttgttcacagattcatcctttttgtttttagcgaatttgaatttgtattgtatcgatgtactctatcaatttgaa 6806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0300 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0300
Description:

Target: scaffold0300; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 113 - 171
Target Start/End: Complemental strand, 10515 - 10458
Alignment:
Q  113 ttcgcaaatttaacctttttgtttttaacaactttgaatttgtattgtatcaatgtact 171  Q
    |||||||||| | |||||| |||||||||| |||| |||||||||||||||||||||||    
T  10515 ttcgcaaattcatccttttggtttttaaca-ctttaaatttgtattgtatcaatgtact 10458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0294 (Bit Score: 34; Significance: 0.0000000009; HSPs: 1)
Name: scaffold0294
Description:

Target: scaffold0294; HSP #1
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 108 - 184
Target Start/End: Complemental strand, 3819 - 3742
Alignment:
Q  108 gtttgttcgcaaatttaacctttttgtttttaacaactttgaatttgtattgtatcaatgtactcta-caatttgaat 184  Q
    |||||||| || ||| | |||||||||||||| | | |||| |||||||||||||| |||||||||| ||||||||||    
T  3819 gtttgttcacagattcatcctttttgtttttaccgaatttggatttgtattgtatcgatgtactctatcaatttgaat 3742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0202 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0202
Description:

Target: scaffold0202; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 108 - 171
Target Start/End: Complemental strand, 22398 - 22335
Alignment:
Q  108 gtttgttcgcaaatttaacctttttgtttttaacaactttgaatttgtattgtatcaatgtact 171  Q
    ||||||||||| ||||| |||||||||||||| | ||||| || ||||||| |||| |||||||    
T  22398 gtttgttcgcagatttatcctttttgtttttacctactttaaaattgtattatatcgatgtact 22335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 108 - 174
Target Start/End: Complemental strand, 404000 - 403934
Alignment:
Q  108 gtttgttcgcaaatttaacctttttgtttttaacaactttgaatttgtattgtatcaatgtactcta 174  Q
    |||||||| || ||| | |||||||||||| | | | ||||||||||||||||||| ||||||||||    
T  404000 gtttgttcacagattcatcctttttgttttcagcgaatttgaatttgtattgtatcgatgtactcta 403934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 109 - 174
Target Start/End: Original strand, 74534 - 74599
Alignment:
Q  109 tttgttcgcaaatttaacctttttgtttttaacaactttgaatttgtattgtatcaatgtactcta 174  Q
    ||||||| || ||| | |||||||||||||| | | |||| |||||||||||||| ||||||||||    
T  74534 tttgttcacagattcatcctttttgtttttagcgaatttggatttgtattgtatcgatgtactcta 74599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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