View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1926_high_14 (Length: 354)
Name: NF1926_high_14
Description: NF1926
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1926_high_14 |
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Alignment Details
Target: chr8 (Bit Score: 317; Significance: 1e-179; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 317; E-Value: 1e-179
Query Start/End: Original strand, 13 - 333
Target Start/End: Original strand, 25894402 - 25894722
Alignment:
| Q |
13 |
aatatagccgaaaatatatccagcatcttcaattttgttgaagagtcgacacgaattaagatcttttagccggaaatcatcgagatgatctatgaagtca |
112 |
Q |
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| T |
25894402 |
aatatagccgaaaatatatccagcatcttcaattttgttgaagagtcgacacgaattaagatcttttagccggaaatcatcgagatgatctatgaagtca |
25894501 |
T |
|
| Q |
113 |
gtatctgcatttgaaaccatcaatgacatatcaagtttagagaggttgcaggagttggttggaaattacaaactgtgattatatcaattatataagaaaa |
212 |
Q |
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| T |
25894502 |
gtatctgcatttgaaaccatcaatgacatatcaagtttagagaggttgcaggagttggttggaaattacaaactgtgattatatcaattatataagaaaa |
25894601 |
T |
|
| Q |
213 |
atctgatacttaatacttcgagcaagcatggagaagctgctatacttgtcaagatgtaaattatgaatatagtgcacaatggattaaaacttattcactt |
312 |
Q |
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||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
25894602 |
atctgatacttaatacttcgagcaagcatggagaagctgatatacttgtcaagatgtaaattatgaatatagtgcacaatggattaaaacttattcactt |
25894701 |
T |
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| Q |
313 |
tattcttgaaaattcagtaat |
333 |
Q |
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||||||||||||||||||||| |
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| T |
25894702 |
tattcttgaaaattcagtaat |
25894722 |
T |
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