View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1926_high_29 (Length: 229)
Name: NF1926_high_29
Description: NF1926
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1926_high_29 |
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Alignment Details
Target: chr1 (Bit Score: 84; Significance: 5e-40; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 89 - 172
Target Start/End: Complemental strand, 35953834 - 35953751
Alignment:
| Q |
89 |
catatgactgatcaaacggttgaaatgcattaattgttagacttgagattacgtacgtagaagagtgtcgtgtgacttcgttta |
172 |
Q |
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| T |
35953834 |
catatgactgatcaaacggttgaaatgcattaattgttagacttgagattacgtacgtagaagagtgtcgtgtgacttcgttta |
35953751 |
T |
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