View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF1926_low_28 (Length: 242)
Name: NF1926_low_28
Description: NF1926
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1926_low_28 |
 | |
|
| [»] scaffold0003 (1 HSPs) |
| | |
|
| [»] scaffold0277 (2 HSPs) |
| | |
|
| [»] scaffold0419 (1 HSPs) |
| | |
|
| [»] scaffold0349 (1 HSPs) |
| | |
|
Alignment Details
Target: chr6 (Bit Score: 157; Significance: 1e-83; HSPs: 35)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 20 - 236
Target Start/End: Original strand, 26803009 - 26803225
Alignment:
| Q |
20 |
ttggacatgaatagatatgagtacaagtttattggagagatagtcaagaacatctccaacaagataagtcgtcagcccttacatgttgccaattaccccg |
119 |
Q |
| |
|
|||||||||||||||||||| |||||||| ||||||||||||||||| |||||||||||||||| | ||||||||||||||||||||| |||||||| | |
|
|
| T |
26803009 |
ttggacatgaatagatatgaatacaagttgattggagagatagtcaaatacatctccaacaagatcaatcgtcagcccttacatgttgctaattaccctg |
26803108 |
T |
|
| Q |
120 |
ttggattgcagtctcgaatacaacaagtgaaatcgcttcttgatgagggacctgttgatggggtccatatggtcggaatttatgggactggaggcttggg |
219 |
Q |
| |
|
|||||||||| |||||| ||||| |||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||| |||||||||||| |
|
|
| T |
26803109 |
ttggattgcactctcgagtacaagaagtgaaatcgcttcttgatgagggacctgatgatggggtccatatggttggaatttatgggattggaggcttggg |
26803208 |
T |
|
| Q |
220 |
taaatcaacacttgcaa |
236 |
Q |
| |
|
||||||| ||||||||| |
|
|
| T |
26803209 |
taaatcagcacttgcaa |
26803225 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 19 - 236
Target Start/End: Complemental strand, 27427232 - 27427015
Alignment:
| Q |
19 |
attggacatgaatagatatgagtacaagtttattggagagatagtcaagaacatctccaacaagataagtcgtcagcccttacatgttgccaattacccc |
118 |
Q |
| |
|
||||||||||||||||||||| ||| || |||||||| |||||||||| |||||||||||||||| ||||| ||| ||||||||||||||| |||||| |
|
|
| T |
27427232 |
attggacatgaatagatatgaatacgagcttattggaaagatagtcaaatacatctccaacaagatcagtcgacagtccttacatgttgccacttaccct |
27427133 |
T |
|
| Q |
119 |
gttggattgcagtctcgaatacaacaagtgaaatcgcttcttgatgagggacctgttgatggggtccatatggtcggaatttatgggactggaggcttgg |
218 |
Q |
| |
|
|||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||| |||||||| | |
|
|
| T |
27427132 |
gttggattgcagtctcgagtacaacaagtgaaatcgcttcttgatgagggacctgatgatggggtccatatggttggaatttatgggattggaggctcag |
27427033 |
T |
|
| Q |
219 |
gtaaatcaacacttgcaa |
236 |
Q |
| |
|
|||||||||||||||||| |
|
|
| T |
27427032 |
gtaaatcaacacttgcaa |
27427015 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 23 - 240
Target Start/End: Original strand, 28786804 - 28787021
Alignment:
| Q |
23 |
gacatgaatagatatgagtacaagtttattggagagatagtcaagaacatctccaacaagataagtcgtcagcccttacatgttgccaattaccccgttg |
122 |
Q |
| |
|
||||||||||||||||| ||||||||||||||||| |||||||| |||||||||||||||| |||||||||||||||||||||||||||||||| |||| |
|
|
| T |
28786804 |
gacatgaatagatatgaatacaagtttattggagatatagtcaaatacatctccaacaagatcagtcgtcagcccttacatgttgccaattaccctgttg |
28786903 |
T |
|
| Q |
123 |
gattgcagtctcgaatacaacaagtgaaatcgcttcttgatgagggacctgttgatggggtccatatggtcggaatttatgggactggaggcttgggtaa |
222 |
Q |
| |
|
|||||||||||||| |||||||||||||||||||||||||||| ||| ||| |||||| |||| ||||| ||| ||||||| ||||||||||||||||| |
|
|
| T |
28786904 |
gattgcagtctcgagtacaacaagtgaaatcgcttcttgatgaaggatctgatgatggagtccgcatggtaggactttatggtactggaggcttgggtaa |
28787003 |
T |
|
| Q |
223 |
atcaacacttgcaaaagc |
240 |
Q |
| |
|
||||||||||| |||||| |
|
|
| T |
28787004 |
atcaacacttggaaaagc |
28787021 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 22 - 240
Target Start/End: Original strand, 28792924 - 28793142
Alignment:
| Q |
22 |
ggacatgaatagatatgagtacaagtttattggagagatagtcaagaacatctccaacaagataagtcgtcagcccttacatgttgccaattaccccgtt |
121 |
Q |
| |
|
|||||| ||||||||||| ||||||||||||||||| |||||||| |||||||||||||||| |||||||||||||||||||||||||||||||| ||| |
|
|
| T |
28792924 |
ggacattaatagatatgaatacaagtttattggagatatagtcaaatacatctccaacaagatcagtcgtcagcccttacatgttgccaattaccctgtt |
28793023 |
T |
|
| Q |
122 |
ggattgcagtctcgaatacaacaagtgaaatcgcttcttgatgagggacctgttgatggggtccatatggtcggaatttatgggactggaggcttgggta |
221 |
Q |
| |
|
||||||||||||||| |||||||||||||||||||||||||||| ||| ||| |||||| |||| ||||| ||| ||||||| |||||||||||||||| |
|
|
| T |
28793024 |
ggattgcagtctcgagtacaacaagtgaaatcgcttcttgatgaaggatctgatgatggagtccgcatggtaggactttatggtactggaggcttgggta |
28793123 |
T |
|
| Q |
222 |
aatcaacacttgcaaaagc |
240 |
Q |
| |
|
|||||||||||| |||||| |
|
|
| T |
28793124 |
aatcaacacttggaaaagc |
28793142 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 19 - 236
Target Start/End: Complemental strand, 27706024 - 27705807
Alignment:
| Q |
19 |
attggacatgaatagatatgagtacaagtttattggagagatagtcaagaacatctccaacaagataagtcgtcagcccttacatgttgccaattacccc |
118 |
Q |
| |
|
|||| |||||||||||||||| |||||| |||||||| |||||||||| |||||||||||||||| ||||| || |||||||||||||||| |||||| |
|
|
| T |
27706024 |
attgcacatgaatagatatgaatacaagcttattggaaagatagtcaaatacatctccaacaagatcagtcgacatcccttacatgttgccacttaccct |
27705925 |
T |
|
| Q |
119 |
gttggattgcagtctcgaatacaacaagtgaaatcgcttcttgatgagggacctgttgatggggtccatatggtcggaatttatgggactggaggcttgg |
218 |
Q |
| |
|
|||||||||||||||||| |||||||||||||||| ||||||||||||||||||| |||||||||||||||||| ||||||| ||| | ||||||||||| |
|
|
| T |
27705924 |
gttggattgcagtctcgagtacaacaagtgaaatcacttcttgatgagggacctgatgatggggtccatatggttggaatttttggcattggaggcttgg |
27705825 |
T |
|
| Q |
219 |
gtaaatcaacacttgcaa |
236 |
Q |
| |
|
|||||||||||||||||| |
|
|
| T |
27705824 |
gtaaatcaacacttgcaa |
27705807 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 144; E-Value: 8e-76
Query Start/End: Original strand, 21 - 240
Target Start/End: Complemental strand, 27718117 - 27717898
Alignment:
| Q |
21 |
tggacatgaatagatatgagtacaagtttattggagagatagtcaagaacatctccaacaagataagtcgtcagcccttacatgttgccaattaccccgt |
120 |
Q |
| |
|
||||||||||||||||||| ||| |||||||||||||||||||||| ||||||||||||||| |||||||| ||||||||||||||||||||||| || |
|
|
| T |
27718117 |
tggacatgaatagatatgaatacgagtttattggagagatagtcaaatacatctccaacaagaccagtcgtcaacccttacatgttgccaattaccctgt |
27718018 |
T |
|
| Q |
121 |
tggattgcagtctcgaatacaacaagtgaaatcgcttcttgatgagggacctgttgatggggtccatatggtcggaatttatgggactggaggcttgggt |
220 |
Q |
| |
|
|||||||||||||||| |||||||||||||||||||||||||||| || ||| |||||| ||||| ||||| ||| ||||||| |||||||| |||||| |
|
|
| T |
27718017 |
tggattgcagtctcgagtacaacaagtgaaatcgcttcttgatgaaagatctgatgatggagtccacatggtaggactttatggtactggaggattgggt |
27717918 |
T |
|
| Q |
221 |
aaatcaacacttgcaaaagc |
240 |
Q |
| |
|
|||||||||||||||||||| |
|
|
| T |
27717917 |
aaatcaacacttgcaaaagc |
27717898 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 19 - 240
Target Start/End: Complemental strand, 27592641 - 27592420
Alignment:
| Q |
19 |
attggacatgaatagatatgagtacaagtttattggagagatagtcaagaacatctccaacaagataagtcgtcagcccttacatgttgccaattacccc |
118 |
Q |
| |
|
|||| |||||||||||||||| |||||| |||||||| |||||||||| |||||||||||||||| ||||| ||||||||| ||||||||| |||||| |
|
|
| T |
27592641 |
attgcacatgaatagatatgaatacaagcttattggaaagatagtcaaatacatctccaacaagatcagtcgacagcccttaaatgttgccacttaccct |
27592542 |
T |
|
| Q |
119 |
gttggattgcagtctcgaatacaacaagtgaaatcgcttcttgatgagggacctgttgatggggtccatatggtcggaatttatgggactggaggcttgg |
218 |
Q |
| |
|
|||||||||||||||||| |||||||||||||||||||||||||||| ||| ||| | |||||||||||||||| ||||||||||||| ||||||||||| |
|
|
| T |
27592541 |
gttggattgcagtctcgagtacaacaagtgaaatcgcttcttgatgaaggatctgatcatggggtccatatggttggaatttatgggattggaggcttgg |
27592442 |
T |
|
| Q |
219 |
gtaaatcaacacttgcaaaagc |
240 |
Q |
| |
|
| |||||||||||||| ||||| |
|
|
| T |
27592441 |
gaaaatcaacacttgcgaaagc |
27592420 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 19 - 236
Target Start/End: Original strand, 27679512 - 27679729
Alignment:
| Q |
19 |
attggacatgaatagatatgagtacaagtttattggagagatagtcaagaacatctccaacaagataagtcgtcagcccttacatgttgccaattacccc |
118 |
Q |
| |
|
|||| |||||||||||||||| |||||| |||||||| |||||||||| |||||||||||||||| ||||| ||||||||||||||||||| |||||| |
|
|
| T |
27679512 |
attgcacatgaatagatatgaatacaagcttattggaaagatagtcaaatacatctccaacaagatcagtcgacagcccttacatgttgccacttaccct |
27679611 |
T |
|
| Q |
119 |
gttggattgcagtctcgaatacaacaagtgaaatcgcttcttgatgagggacctgttgatggggtccatatggtcggaatttatgggactggaggcttgg |
218 |
Q |
| |
|
|||||||||||||||||| |||||||||||||||||||||||||||||||| | | |||||||||||||||||| ||||||||||| | |||||| |||| |
|
|
| T |
27679612 |
gttggattgcagtctcgagtacaacaagtgaaatcgcttcttgatgagggatccgatgatggggtccatatggttggaatttatggcattggaggtttgg |
27679711 |
T |
|
| Q |
219 |
gtaaatcaacacttgcaa |
236 |
Q |
| |
|
| |||||||||||||||| |
|
|
| T |
27679712 |
ggaaatcaacacttgcaa |
27679729 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 19 - 240
Target Start/End: Complemental strand, 27610740 - 27610519
Alignment:
| Q |
19 |
attggacatgaatagatatgagtacaagtttattggagagatagtcaagaacatctccaacaagataagtcgtcagcccttacatgttgccaattacccc |
118 |
Q |
| |
|
||||| ||||||||||||||| ||| |||||| ||||||||||||||| |||||||||||||||| |||||||| ||||||||||||||||||||||| |
|
|
| T |
27610740 |
attgggcatgaatagatatgaatacgagtttactggagagatagtcaaatacatctccaacaagatcagtcgtcaacccttacatgttgccaattaccct |
27610641 |
T |
|
| Q |
119 |
gttggattgcagtctcgaatacaacaagtgaaatcgcttcttgatgagggacctgttgatggggtccatatggtcggaatttatgggactggaggcttgg |
218 |
Q |
| |
|
|||||||||||||||| | ||||| |||||||||||||||||||||| || ||| |||||| ||||| ||||| ||| ||||||| |||||||| |||| |
|
|
| T |
27610640 |
gttggattgcagtctcaagtacaagaagtgaaatcgcttcttgatgaaagatctgatgatggagtccacatggtaggactttatggtactggaggattgg |
27610541 |
T |
|
| Q |
219 |
gtaaatcaacacttgcaaaagc |
240 |
Q |
| |
|
|||||||||||||||||||||| |
|
|
| T |
27610540 |
gtaaatcaacacttgcaaaagc |
27610519 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 19 - 240
Target Start/End: Complemental strand, 27677240 - 27677019
Alignment:
| Q |
19 |
attggacatgaatagatatgagtacaagtttattggagagatagtcaagaacatctccaacaagataagtcgtcagcccttacatgttgccaattacccc |
118 |
Q |
| |
|
|||| |||||||||||||||| |||||| |||||||| |||||||||| |||||||||||||||| |||| || |||||||||||||||| |||||| |
|
|
| T |
27677240 |
attgcacatgaatagatatgaatacaagcttattggaaagatagtcaaatacatctccaacaagatcagtcaacaacccttacatgttgccacttaccct |
27677141 |
T |
|
| Q |
119 |
gttggattgcagtctcgaatacaacaagtgaaatcgcttcttgatgagggacctgttgatggggtccatatggtcggaatttatgggactggaggcttgg |
218 |
Q |
| |
|
|||||||||||||||||| |||||||| ||||||||||||||||||| ||| ||| | |||||||||||||||| ||||||||||||| ||||||||||| |
|
|
| T |
27677140 |
gttggattgcagtctcgagtacaacaaatgaaatcgcttcttgatgaaggatctgatcatggggtccatatggttggaatttatgggattggaggcttgg |
27677041 |
T |
|
| Q |
219 |
gtaaatcaacacttgcaaaagc |
240 |
Q |
| |
|
| |||||||||||||| ||||| |
|
|
| T |
27677040 |
gaaaatcaacacttgcgaaagc |
27677019 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 19 - 240
Target Start/End: Complemental strand, 27604324 - 27604103
Alignment:
| Q |
19 |
attggacatgaatagatatgagtacaagtttattggagagatagtcaagaacatctccaacaagataagtcgtcagcccttacatgttgccaattacccc |
118 |
Q |
| |
|
||||||||||||||||||||| ||| || |||||||| ||||||| || | |||||||||||||| ||||||||||||||||||||||||||||| || |
|
|
| T |
27604324 |
attggacatgaatagatatgaatacgagcttattggaaagatagtgaaagaaatctccaacaagatcagtcgtcagcccttacatgttgccaattatcct |
27604225 |
T |
|
| Q |
119 |
gttggattgcagtctcgaatacaacaagtgaaatcgcttcttgatgagggacctgttgatggggtccatatggtcggaatttatgggactggaggcttgg |
218 |
Q |
| |
|
||||||||||||||||| |||||||||||||||| ||||||||||| || ||| |||||| ||||| ||||| ||| ||||||| |||||||| |||| |
|
|
| T |
27604224 |
attggattgcagtctcgagtacaacaagtgaaatctcttcttgatgaaagatctgatgatggagtccacatggtaggactttatggtactggaggattgg |
27604125 |
T |
|
| Q |
219 |
gtaaatcaacacttgcaaaagc |
240 |
Q |
| |
|
|||||||||||||||||||||| |
|
|
| T |
27604124 |
gtaaatcaacacttgcaaaagc |
27604103 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 31 - 236
Target Start/End: Complemental strand, 27698194 - 27697989
Alignment:
| Q |
31 |
tagatatgagtacaagtttattggagagatagtcaagaacatctccaacaagataagtcgtcagcccttacatgttgccaattaccccgttggattgcag |
130 |
Q |
| |
|
||||||||| ||||||||||||| |||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||| |||||||| ||| |
|
|
| T |
27698194 |
tagatatgaatacaagtttattgaagagatagtcaaatacatctccaacaagatcagtcgtcagcccttacatgttgccaattaccctgttggattacag |
27698095 |
T |
|
| Q |
131 |
tctcgaatacaacaagtgaaatcgcttcttgatgagggacctgttgatggggtccatatggtcggaatttatgggactggaggcttgggtaaatcaacac |
230 |
Q |
| |
|
|||| | ||||| ||||||||| |||||||| | ||| ||| |||||||||||||||||| ||||||| ||||| |||||||||||| |||||||||| |
|
|
| T |
27698094 |
tctcaagtacaaagagtgaaatcaattcttgataatggatctgatgatggggtccatatggttggaatttttgggattggaggcttgggaaaatcaacac |
27697995 |
T |
|
| Q |
231 |
ttgcaa |
236 |
Q |
| |
|
|||||| |
|
|
| T |
27697994 |
ttgcaa |
27697989 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #13
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 23 - 240
Target Start/End: Original strand, 28781667 - 28781884
Alignment:
| Q |
23 |
gacatgaatagatatgagtacaagtttattggagagatagtcaagaacatctccaacaagataagtcgtcagcccttacatgttgccaattaccccgttg |
122 |
Q |
| |
|
||||||||||||||||| |||||||||||||| || |||||||| |||||||||||||||| |||||||||| ||||||||||||||||||||| |||| |
|
|
| T |
28781667 |
gacatgaatagatatgaatacaagtttattggcgatatagtcaaatacatctccaacaagatcagtcgtcagcacttacatgttgccaattaccctgttg |
28781766 |
T |
|
| Q |
123 |
gattgcagtctcgaatacaacaagtgaaatcgcttcttgatgagggacctgttgatggggtccatatggtcggaatttatgggactggaggcttgggtaa |
222 |
Q |
| |
|
|||| ||||| ||| |||||||||||||||||||||||| ||| ||| || | |||| ||| ||||| ||| ||||||| ||||||||||||||||| |
|
|
| T |
28781767 |
gattacagtcccgagtacaacaagtgaaatcgcttcttggtgaaggatatgataatggagtcaggatggtaggactttatggtactggaggcttgggtaa |
28781866 |
T |
|
| Q |
223 |
atcaacacttgcaaaagc |
240 |
Q |
| |
|
||||||||||| |||||| |
|
|
| T |
28781867 |
atcaacacttgtaaaagc |
28781884 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #14
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 21 - 236
Target Start/End: Original strand, 26623835 - 26624050
Alignment:
| Q |
21 |
tggacatgaatagatatgagtacaagtttattggagagatagtcaagaacatctccaacaagataagtcgtcagcccttacatgttgccaattaccccgt |
120 |
Q |
| |
|
|||||||||| |||||||| || | ||||||| | |||||||||| |||||||||||||||| | |||| ||||||||||||||| || ||||| || |
|
|
| T |
26623835 |
tggacatgaacagatatgaatatgattttattgaaaagatagtcaaatacatctccaacaagatcaatcgtgtgcccttacatgttgctaaataccctgt |
26623934 |
T |
|
| Q |
121 |
tggattgcagtctcgaatacaacaagtgaaatcgcttcttgatgagggacctgttgatggggtccatatggtcggaatttatgggactggaggcttgggt |
220 |
Q |
| |
|
|||||| ||||||| | |||||||||||||||| ||||||||| | ||| ||| |||||||||||||||||| ||||| ||||||| |||||||||||| |
|
|
| T |
26623935 |
tggattacagtctcaactacaacaagtgaaatcacttcttgataatggatctgatgatggggtccatatggttggaatgtatgggattggaggcttgggc |
26624034 |
T |
|
| Q |
221 |
aaatcaacacttgcaa |
236 |
Q |
| |
|
|||||||||||||||| |
|
|
| T |
26624035 |
aaatcaacacttgcaa |
26624050 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #15
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 21 - 236
Target Start/End: Original strand, 26729812 - 26730027
Alignment:
| Q |
21 |
tggacatgaatagatatgagtacaagtttattggagagatagtcaagaacatctccaacaagataagtcgtcagcccttacatgttgccaattaccccgt |
120 |
Q |
| |
|
|||||||||| |||||||| || | ||||||| | |||||||||| |||||||||||||||| | |||| ||||||||||||||| || ||||| || |
|
|
| T |
26729812 |
tggacatgaacagatatgaatatgattttattgaaaagatagtcaaatacatctccaacaagatcaatcgtgtgcccttacatgttgctaaataccctgt |
26729911 |
T |
|
| Q |
121 |
tggattgcagtctcgaatacaacaagtgaaatcgcttcttgatgagggacctgttgatggggtccatatggtcggaatttatgggactggaggcttgggt |
220 |
Q |
| |
|
|||||| ||||||| | |||||||||||||||| ||||||||| | ||| ||| |||||||||||||||||| ||||| ||||||| |||||||||||| |
|
|
| T |
26729912 |
tggattacagtctcaactacaacaagtgaaatcacttcttgataatggatctgatgatggggtccatatggttggaatgtatgggattggaggcttgggc |
26730011 |
T |
|
| Q |
221 |
aaatcaacacttgcaa |
236 |
Q |
| |
|
|||||||||||||||| |
|
|
| T |
26730012 |
aaatcaacacttgcaa |
26730027 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #16
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 24 - 236
Target Start/End: Original strand, 31285126 - 31285338
Alignment:
| Q |
24 |
acatgaatagatatgagtacaagtttattggagagatagtcaagaacatctccaacaagataagtcgtcagcccttacatgttgccaattaccccgttgg |
123 |
Q |
| |
|
||||||| |||||||| || | ||||||||||| |||||||| |||||||||||||||| | |||| |||||||||||||||||||||||| ||||| |
|
|
| T |
31285126 |
acatgaacagatatgaatatgattttattggagacatagtcaaatacatctccaacaagatcaatcgtgtgcccttacatgttgccaattaccctgttgg |
31285225 |
T |
|
| Q |
124 |
attgcagtctcgaatacaacaagtgaaatcgcttcttgatgagggacctgttgatggggtccatatggtcggaatttatgggactggaggcttgggtaaa |
223 |
Q |
| |
|
||| ||| |||||||||||||||||||| |||||||||| ||| | || | | ||||| || ||||| ||| ||||||||| ||||||||||||||| |
|
|
| T |
31285226 |
atttaagtttcgaatacaacaagtgaaattgcttcttgataaggaaactaataaaggggtacacatggtaggactttatgggataggaggcttgggtaaa |
31285325 |
T |
|
| Q |
224 |
tcaacacttgcaa |
236 |
Q |
| |
|
||||||||||||| |
|
|
| T |
31285326 |
tcaacacttgcaa |
31285338 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #17
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 19 - 240
Target Start/End: Complemental strand, 27530921 - 27530700
Alignment:
| Q |
19 |
attggacatgaatagatatgagtacaagtttattggagagatagtcaagaacatctccaacaagataagtcgtcagcccttacatgttgccaattacccc |
118 |
Q |
| |
|
||||||||||||||||||||| ||| ||||||||||| |||||||| | |||| ||||||| ||| |||||| |||||||| |||||||||| || || |
|
|
| T |
27530921 |
attggacatgaatagatatgaatacgagtttattggaaagatagtcgaagacatttccaacaggattagtcgtgagcccttagatgttgccaaatatcct |
27530822 |
T |
|
| Q |
119 |
gttggattgcagtctcgaatacaacaagtgaaatcgcttcttgatgagggacctgttgatggggtccatatggtcggaatttatgggactggaggcttgg |
218 |
Q |
| |
|
|||||||| ||||| ||| ||||||| |||||| || ||||||||| | ||| ||||| |||||| ||||| ||| ||||||| ||||||||| | | |
|
|
| T |
27530821 |
gttggattacagtcccgagtacaacatgtgaaagggcatcttgatgaaaaatctgatgatgaggtccacatggtaggactttatggtactggaggcatag |
27530722 |
T |
|
| Q |
219 |
gtaaatcaacacttgcaaaagc |
240 |
Q |
| |
|
|||||||||||||||||||||| |
|
|
| T |
27530721 |
gtaaatcaacacttgcaaaagc |
27530700 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #18
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 22 - 240
Target Start/End: Original strand, 26647044 - 26647262
Alignment:
| Q |
22 |
ggacatgaatagatatgagtacaagtttattggagagatagtcaagaacatctccaacaagataagtcgtcagcccttacatgttgccaattaccccgtt |
121 |
Q |
| |
|
|||||||||||||||||| |||||||||||||| |||||||| | |||||||||||||||| | |||| |||||||| ||||| ||||| ||| |
|
|
| T |
26647044 |
ggacatgaatagatatgaatacaagtttattgggaagatagtcgaagacatctccaacaagatcaatcgtgtcattttacatgtagccaaataccctgtt |
26647143 |
T |
|
| Q |
122 |
ggattgcagtctcgaatacaacaagtgaaatcgcttcttgatgagggacctgttgatggggtccatatggtcggaatttatgggactggaggcttgggta |
221 |
Q |
| |
|
||||| |||| ||| || |||||||||||| |||||||||| | | | ||| ||| |||||||||||||| ||| ||||||| |||||||| ||||||| |
|
|
| T |
26647144 |
ggattagagtcccgattagaacaagtgaaattgcttcttgataaagaatctgatgaaggggtccatatggtaggactttatggtactggaggtttgggta |
26647243 |
T |
|
| Q |
222 |
aatcaacacttgcaaaagc |
240 |
Q |
| |
|
||||||||||||| ||||| |
|
|
| T |
26647244 |
aatcaacacttgccaaagc |
26647262 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #19
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 22 - 240
Target Start/End: Original strand, 26753012 - 26753230
Alignment:
| Q |
22 |
ggacatgaatagatatgagtacaagtttattggagagatagtcaagaacatctccaacaagataagtcgtcagcccttacatgttgccaattaccccgtt |
121 |
Q |
| |
|
|||||||||||||||||| |||||||||||||| |||||||| | |||||||||||||||| | |||| |||||||| ||||| ||||| ||| |
|
|
| T |
26753012 |
ggacatgaatagatatgaatacaagtttattgggaagatagtcgaagacatctccaacaagatcaatcgtgtcattttacatgtagccaaataccctgtt |
26753111 |
T |
|
| Q |
122 |
ggattgcagtctcgaatacaacaagtgaaatcgcttcttgatgagggacctgttgatggggtccatatggtcggaatttatgggactggaggcttgggta |
221 |
Q |
| |
|
||||| |||| ||| || |||||||||||| |||||||||| | | | ||| ||| |||||||||||||| ||| ||||||| |||||||| ||||||| |
|
|
| T |
26753112 |
ggattagagtcccgattagaacaagtgaaattgcttcttgataaagaatctgatgaaggggtccatatggtaggactttatggtactggaggtttgggta |
26753211 |
T |
|
| Q |
222 |
aatcaacacttgcaaaagc |
240 |
Q |
| |
|
||||||||||||| ||||| |
|
|
| T |
26753212 |
aatcaacacttgccaaagc |
26753230 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #20
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 24 - 240
Target Start/End: Original strand, 26656532 - 26656748
Alignment:
| Q |
24 |
acatgaatagatatgagtacaagtttattggagagatagtcaagaacatctccaacaagataagtcgtcagcccttacatgttgccaattaccccgttgg |
123 |
Q |
| |
|
|||||||||||||||| ||||||||||||| | |||||||| |||||||| ||||||| | |||| |||||||||||||| ||||| ||||| |
|
|
| T |
26656532 |
acatgaatagatatgaatacaagtttattgagaatatagtcaaagacatctccgacaagatcaatcgtgtttttttacatgttgccaaataccctgttgg |
26656631 |
T |
|
| Q |
124 |
attgcagtctcgaatacaacaagtgaaatcgcttcttgatgagggacctgttgatggggtccatatggtcggaatttatgggactggaggcttgggtaaa |
223 |
Q |
| |
|
||| |||||||| ||||||||||||||| |||||||||| ||||| || |||| ||| | ||||| ||| ||||||| ||||||||| |||||||| |
|
|
| T |
26656632 |
attagagtctcgagtacaacaagtgaaattgcttcttgataagggatctaaggatgaggttctcatggtaggactttatggtactggaggcatgggtaaa |
26656731 |
T |
|
| Q |
224 |
tcaacacttgcaaaagc |
240 |
Q |
| |
|
||||||||||| ||||| |
|
|
| T |
26656732 |
tcaacacttgccaaagc |
26656748 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #21
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 24 - 240
Target Start/End: Original strand, 26762503 - 26762719
Alignment:
| Q |
24 |
acatgaatagatatgagtacaagtttattggagagatagtcaagaacatctccaacaagataagtcgtcagcccttacatgttgccaattaccccgttgg |
123 |
Q |
| |
|
|||||||||||||||| ||||||||||||| | |||||||| |||||||| ||||||| | |||| |||||||||||||| ||||| ||||| |
|
|
| T |
26762503 |
acatgaatagatatgaatacaagtttattgagaatatagtcaaagacatctccgacaagatcaatcgtgtttttttacatgttgccaaataccctgttgg |
26762602 |
T |
|
| Q |
124 |
attgcagtctcgaatacaacaagtgaaatcgcttcttgatgagggacctgttgatggggtccatatggtcggaatttatgggactggaggcttgggtaaa |
223 |
Q |
| |
|
||| |||||||| ||||||||||||||| |||||||||| ||||| || |||| ||| | ||||| ||| ||||||| ||||||||| |||||||| |
|
|
| T |
26762603 |
attagagtctcgagtacaacaagtgaaattgcttcttgataagggatctaaggatgaggttctcatggtaggactttatggtactggaggcatgggtaaa |
26762702 |
T |
|
| Q |
224 |
tcaacacttgcaaaagc |
240 |
Q |
| |
|
||||||||||| ||||| |
|
|
| T |
26762703 |
tcaacacttgccaaagc |
26762719 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #22
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 98 - 240
Target Start/End: Original strand, 26824460 - 26824602
Alignment:
| Q |
98 |
ttacatgttgccaattaccccgttggattgcagtctcgaatacaacaagtgaaatcgcttcttgatgagggacctgttgatggggtccatatggtcggaa |
197 |
Q |
| |
|
|||||||||||||| ||||| |||||||| ||||| ||| |||||||||||||||| ||||||||| | | | ||| ||||| |||||||||||| ||| |
|
|
| T |
26824460 |
ttacatgttgccaaatacccggttggattacagtcccgagtacaacaagtgaaatctcttcttgataacgaatctgatgatgtggtccatatggtaggac |
26824559 |
T |
|
| Q |
198 |
tttatgggactggaggcttgggtaaatcaacacttgcaaaagc |
240 |
Q |
| |
|
|||| || | |||||| || ||||||||||||||||||||||| |
|
|
| T |
26824560 |
tttacggtattggaggtttaggtaaatcaacacttgcaaaagc |
26824602 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #23
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 99 - 240
Target Start/End: Complemental strand, 27337635 - 27337494
Alignment:
| Q |
99 |
tacatgttgccaattaccccgttggattgcagtctcgaatacaacaagtgaaatcgcttcttgatgagggacctgttgatggggtccatatggtcggaat |
198 |
Q |
| |
|
|||| |||||||| ||||| |||||||| ||||| ||| |||||||||| |||| |||||||||||||| | ||| ||| |||||| | ||||| ||| | |
|
|
| T |
27337635 |
tacacgttgccaaataccctgttggattacagtcccgagtacaacaagtaaaattgcttcttgatgaggaatctgatgaaggggtcaacatggtaggact |
27337536 |
T |
|
| Q |
199 |
ttatgggactggaggcttgggtaaatcaacacttgcaaaagc |
240 |
Q |
| |
|
|||||| ||| |||||||||| |||||||||||||||||||| |
|
|
| T |
27337535 |
ttatggtactagaggcttgggaaaatcaacacttgcaaaagc |
27337494 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #24
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 99 - 240
Target Start/End: Complemental strand, 27398375 - 27398234
Alignment:
| Q |
99 |
tacatgttgccaattaccccgttggattgcagtctcgaatacaacaagtgaaatcgcttcttgatgagggacctgttgatggggtccatatggtcggaat |
198 |
Q |
| |
|
|||| |||||||| ||||| |||||||| ||||| ||| |||||||||| |||| |||||||||||||| | ||| ||| |||||| | ||||| ||| | |
|
|
| T |
27398375 |
tacacgttgccaaataccctgttggattacagtcccgagtacaacaagtaaaattgcttcttgatgaggaatctgatgaaggggtcaacatggtaggact |
27398276 |
T |
|
| Q |
199 |
ttatgggactggaggcttgggtaaatcaacacttgcaaaagc |
240 |
Q |
| |
|
|||||| ||| |||||||||| |||||||||||||||||||| |
|
|
| T |
27398275 |
ttatggtactagaggcttgggaaaatcaacacttgcaaaagc |
27398234 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #25
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 19 - 240
Target Start/End: Original strand, 25539105 - 25539326
Alignment:
| Q |
19 |
attggacatgaatagatatgagtacaagtttattggagagatagtcaagaacatctccaacaagataagtcgtcagcccttacatgttgccaattacccc |
118 |
Q |
| |
|
||||||||||||||||||||| ||||||||||||| |||||||| | ||||||||||||| || | || | ||| |||| ||||| ||||| |
|
|
| T |
25539105 |
attggacatgaatagatatgaatacaagtttattgagaagatagtcgaagacatctccaacaatatcaatcatgtttttttatatgtggccaaataccct |
25539204 |
T |
|
| Q |
119 |
gttggattgcagtctcgaatacaacaagtgaaatcgcttcttgatgagggacctgttgatggggtccatatggtcggaatttatgggactggaggcttgg |
218 |
Q |
| |
|
|||||||| ||||| | |||| |||||||||||| ||||||||| ||| ||| |||| ||||| ||||| ||| ||||||| ||||||||| ||| |
|
|
| T |
25539205 |
gttggattacagtccccaatagaacaagtgaaattgcttcttgacttgggctctgaggatgaggtccgcatggtaggactttatggtactggaggcatgg |
25539304 |
T |
|
| Q |
219 |
gtaaatcaacacttgcaaaagc |
240 |
Q |
| |
|
|||||||||||||||||||||| |
|
|
| T |
25539305 |
gtaaatcaacacttgcaaaagc |
25539326 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #26
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 19 - 240
Target Start/End: Original strand, 25580284 - 25580505
Alignment:
| Q |
19 |
attggacatgaatagatatgagtacaagtttattggagagatagtcaagaacatctccaacaagataagtcgtcagcccttacatgttgccaattacccc |
118 |
Q |
| |
|
|||||||| |||||||||||| ||||||||||||| |||||||| | ||||||||||||| || | || | ||| | || ||||| ||||| |
|
|
| T |
25580284 |
attggacacgaatagatatgaatacaagtttattgagaagatagtcgaagacatctccaacaatatcaatcatgtttttttaaacgtagccaaataccct |
25580383 |
T |
|
| Q |
119 |
gttggattgcagtctcgaatacaacaagtgaaatcgcttcttgatgagggacctgttgatggggtccatatggtcggaatttatgggactggaggcttgg |
218 |
Q |
| |
|
|||||||| ||||| |||||| |||||||||||| ||||||||| ||| ||| |||| |||||| ||||| ||| ||||||| ||||||||| ||| |
|
|
| T |
25580384 |
gttggattacagtcccgaatagaacaagtgaaattgcttcttgacatgggctctgaggatgtggtccacatggtaggactttatggtactggaggcatgg |
25580483 |
T |
|
| Q |
219 |
gtaaatcaacacttgcaaaagc |
240 |
Q |
| |
|
|||||||||||||||||||||| |
|
|
| T |
25580484 |
gtaaatcaacacttgcaaaagc |
25580505 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #27
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 98 - 238
Target Start/End: Complemental strand, 25492860 - 25492720
Alignment:
| Q |
98 |
ttacatgttgccaattaccccgttggattgcagtctcgaatacaacaagtgaaatcgcttcttgatgagggacctgttgatggggtccatatggtcggaa |
197 |
Q |
| |
|
|||||||||||||| ||||| |||||||| || || ||| ||||||| ||||||| |||||| ||||||| | ||| |||| | |||| ||||| ||| |
|
|
| T |
25492860 |
ttacatgttgccaaataccctgttggattacaatcccgagtacaacacgtgaaattgcttctagatgaggtatctgaggatgagttccacatggtaggac |
25492761 |
T |
|
| Q |
198 |
tttatgggactggaggcttgggtaaatcaacacttgcaaaa |
238 |
Q |
| |
|
||||||| ||||||||||| ||||||||||||||||||||| |
|
|
| T |
25492760 |
tttatggtactggaggcttaggtaaatcaacacttgcaaaa |
25492720 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #28
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 98 - 240
Target Start/End: Original strand, 26884711 - 26884853
Alignment:
| Q |
98 |
ttacatgttgccaattaccccgttggattgcagtctcgaatacaacaagtgaaatcgcttcttgatgagggacctgttgatggggtccatatggtcggaa |
197 |
Q |
| |
|
|||||||| ||||| ||||| |||||||| |||| ||| |||||||| | |||| |||||||||| ||| | || || ||||| || ||||| |||| |
|
|
| T |
26884711 |
ttacatgtagccaaataccctgttggattacagtaccgagtacaacaattaaaattgcttcttgataaggaatctaacgaaggggtacacatggtaggaa |
26884810 |
T |
|
| Q |
198 |
tttatgggactggaggcttgggtaaatcaacacttgcaaaagc |
240 |
Q |
| |
|
||||||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
26884811 |
tttatggtactggaggcttgggtaaatcaacacttgcaaaagc |
26884853 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #29
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 19 - 240
Target Start/End: Original strand, 25483621 - 25483842
Alignment:
| Q |
19 |
attggacatgaatagatatgagtacaagtttattggagagatagtcaagaacatctccaacaagataagtcgtcagcccttacatgttgccaattacccc |
118 |
Q |
| |
|
||||||||||||||||||||| |||||||||||| |||||||| | ||||||||||||| || | || | | ||| | || ||||| ||||| |
|
|
| T |
25483621 |
attggacatgaatagatatgaacacaagtttattgagaagatagtccaatacatctccaacaatatcaatcatgattttttaaacgtagccaaataccct |
25483720 |
T |
|
| Q |
119 |
gttggattgcagtctcgaatacaacaagtgaaatcgcttcttgatgagggacctgttgatggggtccatatggtcggaatttatgggactggaggcttgg |
218 |
Q |
| |
|
|||||||| ||||| |||||| |||||||||||| ||||||||| ||| ||| |||| ||||| ||||| ||| ||| ||| ||||||||| ||| |
|
|
| T |
25483721 |
gttggattacagtcccgaatagaacaagtgaaattgcttcttgacatgggctctgaggatgaggtccgcatggtaggactttttggtactggaggcatgg |
25483820 |
T |
|
| Q |
219 |
gtaaatcaacacttgcaaaagc |
240 |
Q |
| |
|
|||||||||||||||||||||| |
|
|
| T |
25483821 |
gtaaatcaacacttgcaaaagc |
25483842 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #30
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 19 - 240
Target Start/End: Original strand, 26143430 - 26143651
Alignment:
| Q |
19 |
attggacatgaatagatatgagtacaagtttattggagagatagtcaagaacatctccaacaagataagtcgtcagcccttacatgttgccaattacccc |
118 |
Q |
| |
|
||||||||||||||||||||| ||||||||||||| |||||||| | ||||||||||||| || | || | ||| |||| ||||| ||||| |
|
|
| T |
26143430 |
attggacatgaatagatatgaatacaagtttattgagaagatagtcgaagacatctccaacaatatcaatcatgtttttttaaatgtagccaaataccct |
26143529 |
T |
|
| Q |
119 |
gttggattgcagtctcgaatacaacaagtgaaatcgcttcttgatgagggacctgttgatggggtccatatggtcggaatttatgggactggaggcttgg |
218 |
Q |
| |
|
|||||||| ||||| |||||| || ||||||||| ||||||||| ||| ||| |||| ||||| ||||| ||| ||| ||| ||||||||| ||| |
|
|
| T |
26143530 |
gttggattacagtcccgaatagaagaagtgaaattgcttcttgacatgggctctgaggatgaggtccgcatggtaggactttttggtactggaggcatgg |
26143629 |
T |
|
| Q |
219 |
gtaaatcaacacttgcaaaagc |
240 |
Q |
| |
|
|||||||||||||||||||||| |
|
|
| T |
26143630 |
gtaaatcaacacttgcaaaagc |
26143651 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #31
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 107 - 240
Target Start/End: Original strand, 26056572 - 26056705
Alignment:
| Q |
107 |
gccaattaccccgttggattgcagtctcgaatacaacaagtgaaatcgcttcttgatgagggacctgttgatggggtccatatggtcggaatttatggga |
206 |
Q |
| |
|
||||| ||||| |||||||||||||| |||||| |||||||||||| ||||||||| ||| ||| ||| ||||| ||||| ||||||| ||| | |
|
|
| T |
26056572 |
gccaaataccctgttggattgcagtcccgaatagaacaagtgaaattgcttcttgacatgggctctgagaatgaggtccgcatggtaggaatttttggta |
26056671 |
T |
|
| Q |
207 |
ctggaggcttgggtaaatcaacacttgcaaaagc |
240 |
Q |
| |
|
| |||||| ||||||||||||||||||||||||| |
|
|
| T |
26056672 |
ccggaggcatgggtaaatcaacacttgcaaaagc |
26056705 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #32
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 107 - 240
Target Start/End: Original strand, 26076542 - 26076675
Alignment:
| Q |
107 |
gccaattaccccgttggattgcagtctcgaatacaacaagtgaaatcgcttcttgatgagggacctgttgatggggtccatatggtcggaatttatggga |
206 |
Q |
| |
|
||||| ||||| |||||||||||||| |||||| |||||||||||| ||||||||| ||| ||| ||| ||||| ||||| ||||||| ||| | |
|
|
| T |
26076542 |
gccaaataccctgttggattgcagtcccgaatagaacaagtgaaattgcttcttgacatgggctctgagaatgaggtccgcatggtaggaatttttggta |
26076641 |
T |
|
| Q |
207 |
ctggaggcttgggtaaatcaacacttgcaaaagc |
240 |
Q |
| |
|
| |||||| ||||||||||||||||||||||||| |
|
|
| T |
26076642 |
ccggaggcatgggtaaatcaacacttgcaaaagc |
26076675 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #33
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 107 - 240
Target Start/End: Original strand, 26862230 - 26862363
Alignment:
| Q |
107 |
gccaattaccccgttggattgcagtctcgaatacaacaagtgaaatcgcttcttgatgagggacctgttgatggggtccatatggtcggaatttatggga |
206 |
Q |
| |
|
||||| ||||| |||||||| |||| ||| || |||||||||||| |||||||||| || | ||| ||| ||||| || ||||| ||| ||||||| | |
|
|
| T |
26862230 |
gccaaataccctgttggattaaagtcccgagtagaacaagtgaaattgcttcttgatatggaatctgatgaaggggtacacatggtaggactttatggta |
26862329 |
T |
|
| Q |
207 |
ctggaggcttgggtaaatcaacacttgcaaaagc |
240 |
Q |
| |
|
|||||||| |||| |||||||||||||||||||| |
|
|
| T |
26862330 |
ctggaggcatggggaaatcaacacttgcaaaagc |
26862363 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #34
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 19 - 240
Target Start/End: Original strand, 27215014 - 27215235
Alignment:
| Q |
19 |
attggacatgaatagatatgagtacaagtttattggagagatagtcaagaacatctccaacaagataagtcgtcagcccttacatgttgccaattacccc |
118 |
Q |
| |
|
||||||||| || |||||||| ||||||||||||| ||||||| | ||||||| ||||||| | |||| | |||||||||||||| |||| |
|
|
| T |
27215014 |
attggacattaacagatatgaatacaagtttattgagaagatagttgaagacatctcaaacaagacgaatcgtgattttttacatgttgccaaacaccct |
27215113 |
T |
|
| Q |
119 |
gttggattgcagtctcgaatacaacaagtgaaatcgcttcttgatgagggacctgttgatggggtccatatggtcggaatttatgggactggaggcttgg |
218 |
Q |
| |
|
|||||||| || | | |||||||||||| |||| ||||||||| ||||| || || | |||||| ||||| ||| || |||| |||||||| ||| |
|
|
| T |
27215114 |
gttggattacatacccaaatacaacaagtaaaattgcttcttgacaagggatctaaggaagaggtccacatggtaggacttcatggagctggaggcatgg |
27215213 |
T |
|
| Q |
219 |
gtaaatcaacacttgcaaaagc |
240 |
Q |
| |
|
|||||||||||||||||||||| |
|
|
| T |
27215214 |
gtaaatcaacacttgcaaaagc |
27215235 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #35
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 19 - 159
Target Start/End: Original strand, 25511500 - 25511640
Alignment:
| Q |
19 |
attggacatgaatagatatgagtacaagtttattggagagatagtcaagaacatctccaacaagataagtcgtcagcccttacatgttgccaattacccc |
118 |
Q |
| |
|
||||||||||||||||| ||| ||||||||||||| |||||||| | |||||||||||||||| | || | || | || ||||| ||||| |
|
|
| T |
25511500 |
attggacatgaatagatctgaatacaagtttattgagaagatagtcgaagacatctccaacaagatcaatcatgtttttttgaacgtagccaaataccct |
25511599 |
T |
|
| Q |
119 |
gttggattgcagtctcgaatacaacaagtgaaatcgcttct |
159 |
Q |
| |
|
|||||||||||||| |||||| |||||||||||| |||||| |
|
|
| T |
25511600 |
gttggattgcagtcccgaatagaacaagtgaaattgcttct |
25511640 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0003 (Bit Score: 150; Significance: 2e-79; HSPs: 1)
Name: scaffold0003
Description:
Target: scaffold0003; HSP #1
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 19 - 236
Target Start/End: Original strand, 60131 - 60348
Alignment:
| Q |
19 |
attggacatgaatagatatgagtacaagtttattggagagatagtcaagaacatctccaacaagataagtcgtcagcccttacatgttgccaattacccc |
118 |
Q |
| |
|
||||||||||||||||||||| ||| || |||||||| |||||||||| |||||||||||||||| ||||| ||| ||||||||||||||| |||||| |
|
|
| T |
60131 |
attggacatgaatagatatgaatacgagcttattggaaagatagtcaaatacatctccaacaagatcagtcgacagtccttacatgttgccacttaccct |
60230 |
T |
|
| Q |
119 |
gttggattgcagtctcgaatacaacaagtgaaatcgcttcttgatgagggacctgttgatggggtccatatggtcggaatttatgggactggaggcttgg |
218 |
Q |
| |
|
|||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||| |||||||| | |
|
|
| T |
60231 |
gttggattgcagtctcgagtacaacaagtgaaatcgcttcttgatgagggacctgatgatggggtccatatggttggaatttatgggattggaggctcag |
60330 |
T |
|
| Q |
219 |
gtaaatcaacacttgcaa |
236 |
Q |
| |
|
|||||||||||||||||| |
|
|
| T |
60331 |
gtaaatcaacacttgcaa |
60348 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 150; Significance: 2e-79; HSPs: 6)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 19 - 236
Target Start/End: Original strand, 18074323 - 18074540
Alignment:
| Q |
19 |
attggacatgaatagatatgagtacaagtttattggagagatagtcaagaacatctccaacaagataagtcgtcagcccttacatgttgccaattacccc |
118 |
Q |
| |
|
||||||||||||||||||||| ||| || |||||||| |||||||||| |||||||||||||||| ||||| ||| ||||||||||||||| |||||| |
|
|
| T |
18074323 |
attggacatgaatagatatgaatacgagcttattggaaagatagtcaaatacatctccaacaagatcagtcgacagtccttacatgttgccacttaccct |
18074422 |
T |
|
| Q |
119 |
gttggattgcagtctcgaatacaacaagtgaaatcgcttcttgatgagggacctgttgatggggtccatatggtcggaatttatgggactggaggcttgg |
218 |
Q |
| |
|
|||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||| |||||||| | |
|
|
| T |
18074423 |
gttggattgcagtctcgagtacaacaagtgaaatcgcttcttgatgagggacctgatgatggggtccatatggttggaatttatgggattggaggctcag |
18074522 |
T |
|
| Q |
219 |
gtaaatcaacacttgcaa |
236 |
Q |
| |
|
|||||||||||||||||| |
|
|
| T |
18074523 |
gtaaatcaacacttgcaa |
18074540 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 19 - 240
Target Start/End: Complemental strand, 18679176 - 18678955
Alignment:
| Q |
19 |
attggacatgaatagatatgagtacaagtttattggagagatagtcaagaacatctccaacaagataagtcgtcagcccttacatgttgccaattacccc |
118 |
Q |
| |
|
||||||||||||||||||||| |||||||||||||||||||||||||| || |||| |||||||| ||||| |||||||||||||||||||||||||| |
|
|
| T |
18679176 |
attggacatgaatagatatgaatacaagtttattggagagatagtcaaatacgtctctaacaagatcagtcggcagcccttacatgttgccaattaccct |
18679077 |
T |
|
| Q |
119 |
gttggattgcagtctcgaatacaacaagtgaaatcgcttcttgatgagggacctgttgatggggtccatatggtcggaatttatgggactggaggcttgg |
218 |
Q |
| |
|
|||||||||||||||||| |||||||||||||||||||||||||||| || || |||||| |||| ||||| ||| ||||||| | ||||||| ||| |
|
|
| T |
18679076 |
gttggattgcagtctcgagtacaacaagtgaaatcgcttcttgatgaatgatcttatgatggagtccgcatggtaggactttatggcattggaggcatgg |
18678977 |
T |
|
| Q |
219 |
gtaaatcaacacttgcaaaagc |
240 |
Q |
| |
|
|||||| ||||||||||||||| |
|
|
| T |
18678976 |
gtaaattaacacttgcaaaagc |
18678955 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 19 - 240
Target Start/End: Complemental strand, 18699016 - 18698795
Alignment:
| Q |
19 |
attggacatgaatagatatgagtacaagtttattggagagatagtcaagaacatctccaacaagataagtcgtcagcccttacatgttgccaattacccc |
118 |
Q |
| |
|
||||||||||||||||||||| ||||||||||||||||| |||||||| || ||||||||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
18699016 |
attggacatgaatagatatgaatacaagtttattggagatatagtcaaatacgtctccaacaagatcagtcgtcagcccttacatgttgccaattaccct |
18698917 |
T |
|
| Q |
119 |
gttggattgcagtctcgaatacaacaagtgaaatcgcttcttgatgagggacctgttgatggggtccatatggtcggaatttatgggactggaggcttgg |
218 |
Q |
| |
|
|||||||||||||||||| |||||||||||||| ||||||||||| | ||| ||| |||||| |||| ||| | ||| ||||||| | ||||||| ||| |
|
|
| T |
18698916 |
gttggattgcagtctcgagtacaacaagtgaaagcgcttcttgataaaggatctgatgatggagtccgcatgttaggactttatggcattggaggcatgg |
18698817 |
T |
|
| Q |
219 |
gtaaatcaacacttgcaaaagc |
240 |
Q |
| |
|
|||||||||||||||| ||||| |
|
|
| T |
18698816 |
gtaaatcaacacttgcgaaagc |
18698795 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 19 - 238
Target Start/End: Complemental strand, 18655093 - 18654874
Alignment:
| Q |
19 |
attggacatgaatagatatgagtacaagtttattggagagatagtcaagaacatctccaacaagataagtcgtcagcccttacatgttgccaattacccc |
118 |
Q |
| |
|
||||||||||||||||||||| ||||||||||||||| |||||||||| | ||||||||||||| ||||||||||||||||||| ||||| |||||| |
|
|
| T |
18655093 |
attggacatgaatagatatgaatacaagtttattggaaagatagtcaaatatgtctccaacaagatcagtcgtcagcccttacatgctgccagttaccct |
18654994 |
T |
|
| Q |
119 |
gttggattgcagtctcgaatacaacaagtgaaatcgcttcttgatgagggacctgttgatggggtccatatggtcggaatttatgggactggaggcttgg |
218 |
Q |
| |
|
||||| |||||||||||| |||||||||||||||||||||||||| | ||| ||| || ||| |||| ||| | ||| ||||||| | ||||||| ||| |
|
|
| T |
18654993 |
gttgggttgcagtctcgagtacaacaagtgaaatcgcttcttgataaaggatctgatggtggagtccgcatgataggactttatggtattggaggcatgg |
18654894 |
T |
|
| Q |
219 |
gtaaatcaacacttgcaaaa |
238 |
Q |
| |
|
| |||||||||||||||||| |
|
|
| T |
18654893 |
gaaaatcaacacttgcaaaa |
18654874 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 19 - 239
Target Start/End: Complemental strand, 18723701 - 18723481
Alignment:
| Q |
19 |
attggacatgaatagatatgagtacaagtttattggagagatagtcaagaacatctccaacaagataagtcgtcagcccttacatgttgccaattacccc |
118 |
Q |
| |
|
||||||||||||||||||||| ||||||||||||||| |||||||||| | || ||||||||| ||||||||||||||||||||||||| |||||| |
|
|
| T |
18723701 |
attggacatgaatagatatgaatacaagtttattggaaagatagtcaaatatgtcaacaacaagatcagtcgtcagcccttacatgttgccacttaccct |
18723602 |
T |
|
| Q |
119 |
gttggattgcagtctcgaatacaacaagtgaaatcgcttcttgatgagggacctgttgatggggtccatatggtcggaatttatgggactggaggcttgg |
218 |
Q |
| |
|
||||| |||||||||||| |||||||||||||||||||||||||| | ||| || || ||| |||| ||| | ||| ||||||| | ||||||| ||| |
|
|
| T |
18723601 |
gttgggttgcagtctcgagtacaacaagtgaaatcgcttcttgataaaggatctaatggtggagtccgcatgataggactttatggtattggaggcatgg |
18723502 |
T |
|
| Q |
219 |
gtaaatcaacacttgcaaaag |
239 |
Q |
| |
|
| ||||||||||||||||||| |
|
|
| T |
18723501 |
gaaaatcaacacttgcaaaag |
18723481 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 19 - 239
Target Start/End: Complemental strand, 18731120 - 18730900
Alignment:
| Q |
19 |
attggacatgaatagatatgagtacaagtttattggagagatagtcaagaacatctccaacaagataagtcgtcagcccttacatgttgccaattacccc |
118 |
Q |
| |
|
||||||||||||||||||||| ||||||||||||| | |||||||||| | ||||||||||||| ||||||||||||||||||||||||| |||||| |
|
|
| T |
18731120 |
attggacatgaatagatatgaatacaagtttattgaaaagatagtcaaatatgtctccaacaagatcagtcgtcagcccttacatgttgccatttaccct |
18731021 |
T |
|
| Q |
119 |
gttggattgcagtctcgaatacaacaagtgaaatcgcttcttgatgagggacctgttgatggggtccatatggtcggaatttatgggactggaggcttgg |
218 |
Q |
| |
|
||||| |||||||||||| |||||||||||||||||||||||||| | ||| || || ||| |||| ||| | ||| ||||||| | ||||||| ||| |
|
|
| T |
18731020 |
gttgggttgcagtctcgagtacaacaagtgaaatcgcttcttgataaaggatcttatggtggagtccgcatgataggactttatggtattggaggcatgg |
18730921 |
T |
|
| Q |
219 |
gtaaatcaacacttgcaaaag |
239 |
Q |
| |
|
| |||||||||||||| |||| |
|
|
| T |
18730920 |
gaaaatcaacacttgctaaag |
18730900 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0277 (Bit Score: 143; Significance: 3e-75; HSPs: 2)
Name: scaffold0277
Description:
Target: scaffold0277; HSP #1
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 22 - 240
Target Start/End: Complemental strand, 4329 - 4111
Alignment:
| Q |
22 |
ggacatgaatagatatgagtacaagtttattggagagatagtcaagaacatctccaacaagataagtcgtcagcccttacatgttgccaattaccccgtt |
121 |
Q |
| |
|
|||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||| ||| |
|
|
| T |
4329 |
ggacattaatagatatgaatacaagtttattggagagatagtcaagaacatctccaacaagatcagtcatcagcccttacatgttgccaattaccctgtt |
4230 |
T |
|
| Q |
122 |
ggattgcagtctcgaatacaacaagtgaaatcgcttcttgatgagggacctgttgatggggtccatatggtcggaatttatgggactggaggcttgggta |
221 |
Q |
| |
|
||||| ||||||||| ||||||| |||||||||||||||||||| ||| ||| | |||| | ||| ||||| ||| ||||||| |||||||||||||||| |
|
|
| T |
4229 |
ggattacagtctcgagtacaacatgtgaaatcgcttcttgatgaaggatctgatcatggagcccacatggtaggactttatggtactggaggcttgggta |
4130 |
T |
|
| Q |
222 |
aatcaacacttgcaaaagc |
240 |
Q |
| |
|
|||||||||||| |||||| |
|
|
| T |
4129 |
aatcaacacttggaaaagc |
4111 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0277; HSP #2
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 23 - 240
Target Start/End: Complemental strand, 13291 - 13074
Alignment:
| Q |
23 |
gacatgaatagatatgagtacaagtttattggagagatagtcaagaacatctccaacaagataagtcgtcagcccttacatgttgccaattaccccgttg |
122 |
Q |
| |
|
||||||||||||||||| |||||||||||||| || |||||||| |||||||||||||||| |||||||||||||||||||||||||||||||| |||| |
|
|
| T |
13291 |
gacatgaatagatatgaatacaagtttattggcgatatagtcaaatacatctccaacaagatcagtcgtcagcccttacatgttgccaattaccctgttg |
13192 |
T |
|
| Q |
123 |
gattgcagtctcgaatacaacaagtgaaatcgcttcttgatgagggacctgttgatggggtccatatggtcggaatttatgggactggaggcttgggtaa |
222 |
Q |
| |
|
|||| ||||||||| ||||||| |||||||||||||||||||| ||| ||| |||||| ||||| ||||| ||| ||||||| ||||||||||||||||| |
|
|
| T |
13191 |
gattacagtctcgagtacaacatgtgaaatcgcttcttgatgaaggatctgatgatggagtccacatggtaggactttatggtactggaggcttgggtaa |
13092 |
T |
|
| Q |
223 |
atcaacacttgcaaaagc |
240 |
Q |
| |
|
||||||||||| |||||| |
|
|
| T |
13091 |
atcaacacttggaaaagc |
13074 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0419 (Bit Score: 142; Significance: 1e-74; HSPs: 1)
Name: scaffold0419
Description:
Target: scaffold0419; HSP #1
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 23 - 240
Target Start/End: Original strand, 8053 - 8270
Alignment:
| Q |
23 |
gacatgaatagatatgagtacaagtttattggagagatagtcaagaacatctccaacaagataagtcgtcagcccttacatgttgccaattaccccgttg |
122 |
Q |
| |
|
||||||||||||||||| |||||||||||||| || |||||||| |||||||||||||||| |||||||||||||||||||||||||||||||| |||| |
|
|
| T |
8053 |
gacatgaatagatatgaatacaagtttattggcgatatagtcaaatacatctccaacaagatcagtcgtcagcccttacatgttgccaattaccctgttg |
8152 |
T |
|
| Q |
123 |
gattgcagtctcgaatacaacaagtgaaatcgcttcttgatgagggacctgttgatggggtccatatggtcggaatttatgggactggaggcttgggtaa |
222 |
Q |
| |
|
|||| ||||||||| ||||||| |||||||||||||||||||| ||| ||| |||||| ||||| ||||| ||| ||||||| ||||||||||||||||| |
|
|
| T |
8153 |
gattacagtctcgagtacaacatgtgaaatcgcttcttgatgaaggatctgatgatggagtccacatggtaggactttatggtactggaggcttgggtaa |
8252 |
T |
|
| Q |
223 |
atcaacacttgcaaaagc |
240 |
Q |
| |
|
||||||||||| |||||| |
|
|
| T |
8253 |
atcaacacttggaaaagc |
8270 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 138; Significance: 3e-72; HSPs: 3)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 23 - 236
Target Start/End: Complemental strand, 267956 - 267743
Alignment:
| Q |
23 |
gacatgaatagatatgagtacaagtttattggagagatagtcaagaacatctccaacaagataagtcgtcagcccttacatgttgccaattaccccgttg |
122 |
Q |
| |
|
||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||| |||||| ||||||||||||||||||||||||| |||| |
|
|
| T |
267956 |
gacatgaatagatatgaatacaagtttattggagagatagtcaaatacatctccaacaagatcagtcgtgagcccttacatgttgccaattaccctgttg |
267857 |
T |
|
| Q |
123 |
gattgcagtctcgaatacaacaagtgaaatcgcttcttgatgagggacctgttgatggggtccatatggtcggaatttatgggactggaggcttgggtaa |
222 |
Q |
| |
|
|||| ||||| | ||||||||||||||| |||||||||| | ||| ||| |||||||||||||||||| ||||||||||||| ||||||||||||||| |
|
|
| T |
267856 |
gattatggtctcaagtacaacaagtgaaattgcttcttgataatggatctgatgatggggtccatatggttggaatttatgggattggaggcttgggtaa |
267757 |
T |
|
| Q |
223 |
atcaacacttgcaa |
236 |
Q |
| |
|
|||||| ||||||| |
|
|
| T |
267756 |
atcaacccttgcaa |
267743 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 98 - 240
Target Start/End: Complemental strand, 28163916 - 28163774
Alignment:
| Q |
98 |
ttacatgttgccaattaccccgttggattgcagtctcgaatacaacaagtgaaatcgcttcttgatgagggacctgttgatggggtccatatggtcggaa |
197 |
Q |
| |
|
||||||||||| || || || |||||||| || |||| | ||||||||||||||| |||||| ||| ||||| || ||||| |||||| ||||| ||| |
|
|
| T |
28163916 |
ttacatgttgcaaaatatcctgttggattacaatctcaagtacaacaagtgaaattgcttctcgataagggatatgatgatgaggtccacatggtaggac |
28163817 |
T |
|
| Q |
198 |
tttatgggactggaggcttgggtaaatcaacacttgcaaaagc |
240 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
28163816 |
tttatgatactggaggcttgggtaaatcaacacttgcaaaagc |
28163774 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 97 - 240
Target Start/End: Complemental strand, 28127217 - 28127074
Alignment:
| Q |
97 |
cttacatgttgccaattaccccgttggattgcagtctcgaatacaacaagtgaaatcgcttcttgatgagggacctgttgatggggtccatatggtcgga |
196 |
Q |
| |
|
||||||||||||||| || || |||||||| ||| | | ||||||||||||| | |||||| ||| ||||| || ||||| |||||| ||||| ||| |
|
|
| T |
28127217 |
cttacatgttgccaaatatcctgttggattacaggaccaagtacaacaagtgaatttgcttctcgataagggatatgatgatgaggtccacatggtagga |
28127118 |
T |
|
| Q |
197 |
atttatgggactggaggcttgggtaaatcaacacttgcaaaagc |
240 |
Q |
| |
|
||||||| | ||||||||||||||||||||||||||||||||| |
|
|
| T |
28127117 |
ctttatggtattggaggcttgggtaaatcaacacttgcaaaagc |
28127074 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0349 (Bit Score: 136; Significance: 5e-71; HSPs: 1)
Name: scaffold0349
Description:
Target: scaffold0349; HSP #1
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 21 - 240
Target Start/End: Complemental strand, 3157 - 2938
Alignment:
| Q |
21 |
tggacatgaatagatatgagtacaagtttattggagagatagtcaagaacatctccaacaagataagtcgtcagcccttacatgttgccaattaccccgt |
120 |
Q |
| |
|
||||||||||||||||||| ||| |||||||||||||||||||||| ||||||||||||||| |||||||| ||||||||||||||||||||||| || |
|
|
| T |
3157 |
tggacatgaatagatatgaatacgagtttattggagagatagtcaaatacatctccaacaagaccagtcgtcaacccttacatgttgccaattaccctgt |
3058 |
T |
|
| Q |
121 |
tggattgcagtctcgaatacaacaagtgaaatcgcttcttgatgagggacctgttgatggggtccatatggtcggaatttatgggactggaggcttgggt |
220 |
Q |
| |
|
|||| || |||||||| |||||||||||||||||||||||||||| || ||| |||||| ||||| ||||| ||| ||||||| |||||||| |||||| |
|
|
| T |
3057 |
tggaatgaagtctcgagtacaacaagtgaaatcgcttcttgatgaaagatctgatgatggagtccacatggtaggactttatggtactggaggattgggt |
2958 |
T |
|
| Q |
221 |
aaatcaacacttgcaaaagc |
240 |
Q |
| |
|
|||||||||||||||||||| |
|
|
| T |
2957 |
aaatcaacacttgcaaaagc |
2938 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 118; Significance: 3e-60; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 23 - 236
Target Start/End: Complemental strand, 29273454 - 29273241
Alignment:
| Q |
23 |
gacatgaatagatatgagtacaagtttattggagagatagtcaagaacatctccaacaagataagtcgtcagcccttacatgttgccaattaccccgttg |
122 |
Q |
| |
|
||||||||||||||||| ||||||||||| |||||||||||||| |||||||||||||||| || || |||||||||||||||||| ||||| |||| |
|
|
| T |
29273454 |
gacatgaatagatatgaatacaagtttatcggagagatagtcaaatacatctccaacaagatcagccgcgtgcccttacatgttgccaaataccctgttg |
29273355 |
T |
|
| Q |
123 |
gattgcagtctcgaatacaacaagtgaaatcgcttcttgatgagggacctgttgatggggtccatatggtcggaatttatgggactggaggcttgggtaa |
222 |
Q |
| |
|
|||| ||||||| | |||||||||| ||||||||||||||| | ||| ||| ||||||| |||||||||| ||||||||||||| ||| ||||||||||| |
|
|
| T |
29273354 |
gattacagtctcaagtacaacaagtcaaatcgcttcttgataatggatctgatgatgggatccatatggttggaatttatgggattggtggcttgggtaa |
29273255 |
T |
|
| Q |
223 |
atcaacacttgcaa |
236 |
Q |
| |
|
|||||| ||||||| |
|
|
| T |
29273254 |
atcaacccttgcaa |
29273241 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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