View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1926_low_35 (Length: 208)
Name: NF1926_low_35
Description: NF1926
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1926_low_35 |
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Alignment Details
Target: chr7 (Bit Score: 106; Significance: 3e-53; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 17 - 147
Target Start/End: Complemental strand, 22327422 - 22327292
Alignment:
| Q |
17 |
cacagacttaataatgattttcattttgatcaaataattacggtnnnnnnnggaaatagatttctcaacaagtggaattttagaccactccaacgatcat |
116 |
Q |
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| T |
22327422 |
cacagacttaataatgattttcattttgatcaaataattacggtaaaaaaaggaaatagatttctcaacaagtggaattttagaccactccaacgatcat |
22327323 |
T |
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| Q |
117 |
atatatagtatttaacatgttgaaccactaa |
147 |
Q |
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||| ||||||||||||||||||||||||||| |
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| T |
22327322 |
atagatagtatttaacatgttgaaccactaa |
22327292 |
T |
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