View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19270_low_9 (Length: 424)

Name: NF19270_low_9
Description: NF19270
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19270_low_9
NF19270_low_9
[»] chr1 (28 HSPs)
chr1 (235-408)||(48589655-48589829)
chr1 (235-408)||(48594739-48594913)
chr1 (235-408)||(48599350-48599524)
chr1 (21-230)||(48594179-48594388)
chr1 (21-230)||(48598790-48598999)
chr1 (17-230)||(48589088-48589305)
chr1 (21-116)||(2820957-2821052)
chr1 (21-115)||(12800424-12800518)
chr1 (21-115)||(28371657-28371751)
chr1 (19-115)||(12799989-12800085)
chr1 (21-113)||(48153113-48153205)
chr1 (21-116)||(50164236-50164331)
chr1 (21-115)||(2821443-2821537)
chr1 (21-116)||(33631044-33631139)
chr1 (21-115)||(43756301-43756395)
chr1 (21-115)||(50164663-50164757)
chr1 (21-116)||(28371198-28371293)
chr1 (16-118)||(38469234-38469336)
chr1 (21-115)||(43755849-43755943)
chr1 (21-116)||(38328840-38328935)
chr1 (52-117)||(17151864-17151929)
chr1 (21-117)||(38468904-38469000)
chr1 (49-117)||(33630475-33630543)
chr1 (21-87)||(38328415-38328481)
chr1 (55-116)||(17151001-17151062)
chr1 (53-88)||(32537672-32537707)
chr1 (53-115)||(32538488-32538550)
chr1 (60-89)||(45065378-45065407)
[»] chr6 (17 HSPs)
chr6 (21-118)||(28983246-28983343)
chr6 (21-117)||(34717709-34717805)
chr6 (21-116)||(34717241-34717336)
chr6 (21-115)||(19062777-19062871)
chr6 (19-109)||(28535415-28535506)
chr6 (21-117)||(7635589-7635685)
chr6 (21-115)||(28982782-28982875)
chr6 (21-116)||(7635123-7635218)
chr6 (21-115)||(18290449-18290543)
chr6 (47-116)||(2924952-2925021)
chr6 (21-116)||(18290214-18290309)
chr6 (21-116)||(4348846-4348941)
chr6 (21-88)||(12999431-12999498)
chr6 (52-89)||(10608304-10608341)
chr6 (70-114)||(14496445-14496489)
chr6 (52-89)||(930950-930988)
chr6 (53-109)||(18605845-18605901)
[»] chr7 (23 HSPs)
chr7 (21-116)||(20559745-20559840)
chr7 (21-116)||(20560235-20560330)
chr7 (21-115)||(33139774-33139868)
chr7 (21-115)||(33140248-33140342)
chr7 (21-116)||(42901090-42901185)
chr7 (21-115)||(4179637-4179731)
chr7 (21-116)||(4180292-4180387)
chr7 (21-115)||(42900647-42900741)
chr7 (21-115)||(40641124-40641218)
chr7 (21-117)||(30414179-30414275)
chr7 (21-117)||(25137410-25137506)
chr7 (16-77)||(35211940-35212001)
chr7 (24-115)||(40640653-40640741)
chr7 (21-115)||(25137878-25137973)
chr7 (54-115)||(33686926-33686987)
chr7 (52-89)||(29006374-29006411)
chr7 (52-89)||(29007183-29007220)
chr7 (53-90)||(41224828-41224865)
chr7 (53-116)||(33687735-33687798)
chr7 (45-118)||(42607078-42607151)
chr7 (55-88)||(35613231-35613264)
chr7 (52-89)||(44896073-44896110)
chr7 (53-89)||(29314608-29314644)
[»] chr3 (30 HSPs)
chr3 (21-115)||(930387-930481)
chr3 (21-116)||(11442109-11442204)
chr3 (21-116)||(929910-930005)
chr3 (21-115)||(21166110-21166204)
chr3 (21-115)||(32473761-32473855)
chr3 (21-114)||(42257215-42257308)
chr3 (21-116)||(32474416-32474511)
chr3 (19-109)||(38000244-38000334)
chr3 (19-117)||(14788552-14788650)
chr3 (21-117)||(43521075-43521168)
chr3 (21-114)||(50766631-50766723)
chr3 (21-118)||(26006732-26006829)
chr3 (21-116)||(5113197-5113292)
chr3 (21-100)||(11441664-11441743)
chr3 (21-115)||(20586538-20586632)
chr3 (21-115)||(24394688-24394782)
chr3 (21-118)||(5113662-5113759)
chr3 (21-117)||(36992127-36992223)
chr3 (21-117)||(37017567-37017663)
chr3 (21-115)||(20586072-20586166)
chr3 (21-88)||(45000781-45000848)
chr3 (21-117)||(14788272-14788368)
chr3 (21-115)||(24394247-24394341)
chr3 (21-115)||(26006146-26006240)
chr3 (21-114)||(45000316-45000409)
chr3 (21-116)||(43104731-43104826)
chr3 (66-117)||(50836214-50836265)
chr3 (66-117)||(50839588-50839639)
chr3 (21-89)||(42258016-42258083)
chr3 (74-111)||(24181950-24181987)
[»] chr8 (14 HSPs)
chr8 (21-118)||(14197656-14197753)
chr8 (21-115)||(37657847-37657941)
chr8 (21-113)||(39439760-39439852)
chr8 (23-115)||(41714603-41714695)
chr8 (21-115)||(30846016-30846110)
chr8 (21-116)||(30846450-30846545)
chr8 (21-113)||(39440553-39440644)
chr8 (56-115)||(31408164-31408223)
chr8 (16-72)||(41715216-41715272)
chr8 (49-93)||(42573602-42573646)
chr8 (21-72)||(37658498-37658549)
chr8 (52-89)||(35759223-35759260)
chr8 (52-89)||(41348171-41348208)
chr8 (53-89)||(41092199-41092235)
[»] chr5 (16 HSPs)
chr5 (21-115)||(5620823-5620917)
chr5 (19-118)||(42655692-42655791)
chr5 (21-117)||(12330616-12330712)
chr5 (21-116)||(3595776-3595871)
chr5 (21-116)||(7858326-7858421)
chr5 (21-115)||(8321341-8321435)
chr5 (21-115)||(12330148-12330242)
chr5 (21-96)||(16996983-16997058)
chr5 (21-115)||(29759597-29759691)
chr5 (28-114)||(3596254-3596340)
chr5 (21-115)||(8320875-8320969)
chr5 (21-115)||(24027187-24027281)
chr5 (21-88)||(24027640-24027707)
chr5 (21-117)||(7858773-7858869)
chr5 (51-116)||(31078455-31078520)
chr5 (58-116)||(36912245-36912302)
[»] chr4 (21 HSPs)
chr4 (21-115)||(19860330-19860424)
chr4 (21-116)||(19860826-19860921)
chr4 (21-116)||(5235373-5235468)
chr4 (21-116)||(20174969-20175064)
chr4 (21-116)||(6934456-6934551)
chr4 (29-116)||(52532392-52532479)
chr4 (21-116)||(6933820-6933915)
chr4 (21-113)||(52532125-52532217)
chr4 (21-116)||(5259282-5259377)
chr4 (21-116)||(5235840-5235935)
chr4 (21-118)||(30213869-30213966)
chr4 (49-89)||(46764279-46764319)
chr4 (52-89)||(11680303-11680340)
chr4 (52-89)||(11688582-11688619)
chr4 (52-89)||(25655623-25655660)
chr4 (49-89)||(31910581-31910621)
chr4 (52-94)||(12590187-12590229)
chr4 (53-115)||(3167463-3167525)
chr4 (53-109)||(39412771-39412827)
chr4 (45-89)||(3847913-3847957)
chr4 (53-116)||(39413607-39413670)
[»] chr2 (18 HSPs)
chr2 (21-115)||(3705337-3705431)
chr2 (21-115)||(16681566-16681660)
chr2 (21-117)||(3705778-3705876)
chr2 (21-115)||(7994527-7994621)
chr2 (21-115)||(30899390-30899484)
chr2 (21-116)||(15561994-15562089)
chr2 (21-116)||(16903851-16903946)
chr2 (21-116)||(16992345-16992441)
chr2 (21-116)||(37996537-37996632)
chr2 (21-115)||(6609997-6610091)
chr2 (21-116)||(15561540-15561635)
chr2 (21-88)||(7994082-7994149)
chr2 (21-115)||(30899855-30899949)
chr2 (21-114)||(6609552-6609645)
chr2 (21-88)||(16903425-16903491)
chr2 (32-89)||(16682231-16682288)
chr2 (52-116)||(34617652-34617716)
chr2 (53-89)||(40992249-40992285)
[»] scaffold0508 (2 HSPs)
scaffold0508 (21-118)||(4130-4227)
scaffold0508 (21-115)||(4578-4672)
[»] scaffold0022 (2 HSPs)
scaffold0022 (21-116)||(61573-61668)
scaffold0022 (21-69)||(62041-62089)
[»] scaffold0006 (1 HSPs)
scaffold0006 (21-88)||(202237-202304)
[»] scaffold0095 (1 HSPs)
scaffold0095 (21-113)||(42886-42977)
[»] scaffold0136 (1 HSPs)
scaffold0136 (44-118)||(22203-22278)
[»] scaffold0155 (1 HSPs)
scaffold0155 (53-89)||(17366-17402)


Alignment Details
Target: chr1 (Bit Score: 159; Significance: 2e-84; HSPs: 28)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 159; E-Value: 2e-84
Query Start/End: Original strand, 235 - 408
Target Start/End: Original strand, 48589655 - 48589829
Alignment:
Q  235 ttttcgtaattgaactttctggtaatctgtttttacatttatcgcaactttgattccaactcatgtttattaccctaaaaatagtta-tttttgatacta 333  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  48589655 ttttcgtaattgaactttctggtaatctgtttttacatttatcgcaactttgattccaactcatgtttattaccctaaaaatagttattttttgatacta 48589754  T
Q  334 aaataagcgaattttgtctcaatagtgatactttgtttttagattcaatattggggtaataattcgccttttatg 408  Q
    ||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  48589755 aaatatgtgaattttgtctcaatagtgatactttgtttttagattcaatattggggtaataattcgccttttatg 48589829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 159; E-Value: 2e-84
Query Start/End: Original strand, 235 - 408
Target Start/End: Original strand, 48594739 - 48594913
Alignment:
Q  235 ttttcgtaattgaactttctggtaatctgtttttacatttatcgcaactttgattccaactcatgtttattaccctaaaaatagtta-tttttgatacta 333  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  48594739 ttttcgtaattgaactttctggtaatctgtttttacatttatcgcaactttgattccaactcatgtttattaccctaaaaatagttattttttgatacta 48594838  T
Q  334 aaataagcgaattttgtctcaatagtgatactttgtttttagattcaatattggggtaataattcgccttttatg 408  Q
    ||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  48594839 aaatatgtgaattttgtctcaatagtgatactttgtttttagattcaatattggggtaataattcgccttttatg 48594913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 159; E-Value: 2e-84
Query Start/End: Original strand, 235 - 408
Target Start/End: Original strand, 48599350 - 48599524
Alignment:
Q  235 ttttcgtaattgaactttctggtaatctgtttttacatttatcgcaactttgattccaactcatgtttattaccctaaaaatagtta-tttttgatacta 333  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  48599350 ttttcgtaattgaactttctggtaatctgtttttacatttatcgcaactttgattccaactcatgtttattaccctaaaaatagttattttttgatacta 48599449  T
Q  334 aaataagcgaattttgtctcaatagtgatactttgtttttagattcaatattggggtaataattcgccttttatg 408  Q
    ||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  48599450 aaatatgtgaattttgtctcaatagtgatactttgtttttagattcaatattggggtaataattcgccttttatg 48599524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 21 - 230
Target Start/End: Original strand, 48594179 - 48594388
Alignment:
Q  21 agtatgataaggatgtgttcttggtttgatttaatggtcaaaaactaactttcccatggtgggaaaaaattagctttcccttgctaaacctcacctatgc 120  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||| |||||||||  |||||||||||||||||||    
T  48594179 agtatgataaggatgtgttcttggtttgatctaatggtcaaaaactaactttcccatgatgggaaaaaagtagctttccaatgctaaacctcacctatgc 48594278  T
Q  121 cagggggatagtcagttgattcaatatataccattttgatttcttnnnnnnnnnnttgaggttattttacttagattatttgcaatacaaattaatatta 220  Q
    |||||||||||||||||||||||||||||||||||||||||||||          |||||||| ||||||||||||||||||||||| ||||||||||||    
T  48594279 cagggggatagtcagttgattcaatatataccattttgatttcttacaaaaaaaattgaggtttttttacttagattatttgcaatataaattaatatta 48594378  T
Q  221 tcatataatt 230  Q
    ||||||||||    
T  48594379 tcatataatt 48594388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 21 - 230
Target Start/End: Original strand, 48598790 - 48598999
Alignment:
Q  21 agtatgataaggatgtgttcttggtttgatttaatggtcaaaaactaactttcccatggtgggaaaaaattagctttcccttgctaaacctcacctatgc 120  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||| |||||||||  |||||||||||||||||||    
T  48598790 agtatgataaggatgtgttcttggtttgatctaatggtcaaaaactaactttcccatgatgggaaaaaagtagctttccaatgctaaacctcacctatgc 48598889  T
Q  121 cagggggatagtcagttgattcaatatataccattttgatttcttnnnnnnnnnnttgaggttattttacttagattatttgcaatacaaattaatatta 220  Q
    |||||||||||||||||||||||||||||||||||||||||||||          |||||||| ||||||||||||||||||||||| ||||||||||||    
T  48598890 cagggggatagtcagttgattcaatatataccattttgatttcttacaaaaaaaattgaggtttttttacttagattatttgcaatataaattaatatta 48598989  T
Q  221 tcatataatt 230  Q
    ||||||||||    
T  48598990 tcatataatt 48598999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 17 - 230
Target Start/End: Original strand, 48589088 - 48589305
Alignment:
Q  17 atgaagtatgataaggatgtgttcttggtttgatttaatggtcaaaaactaactttcccatggtgggaaaaaat--tagctttcccttgctaaacctcac 114  Q
    ||||||||||||||||||||||||||| |||||| |||| ||| |||||||| ||||||||||| | ||||||   ||| |||||| |||||||||||||    
T  48589088 atgaagtatgataaggatgtgttcttgatttgatctaatcgtcgaaaactaattttcccatggtagaaaaaaaaagtagttttcccatgctaaacctcac 48589187  T
Q  115 ctatgccagggggatagtcagttgattcaatatataccattttgattt-cttnnnnnnnnnnttgagg-ttattttacttagattatttgcaatacaaat 212  Q
     |||||||||||||||||||||||||||||||||||||||||||||||  ||          |||||| || |||||||||||||||||||||||||||     
T  48589188 atatgccagggggatagtcagttgattcaatatataccattttgatttattttttttaaaaattgaggtttcttttacttagattatttgcaatacaaac 48589287  T
Q  213 taatattatcatataatt 230  Q
    ||||||||||||||||||    
T  48589288 taatattatcatataatt 48589305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 21 - 116
Target Start/End: Complemental strand, 2821052 - 2820957
Alignment:
Q  21 agtatgataaggatgtgttcttggtttgatttaatggtcaaaaactaactttcccatggtgggaaaaaattagctttcccttgctaaacctcacct 116  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||| || ||||||||||||    
T  2821052 agtatgataaggatgtgttcttggtttgatctaatggtcaaaaactaactttcccatggtgggaaaaaagtagctttcccatgttaaacctcacct 2820957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 21 - 115
Target Start/End: Original strand, 12800424 - 12800518
Alignment:
Q  21 agtatgataaggatgtgttcttggtttgatttaatggtcaaaaactaactttcccatggtgggaaaaaattagctttcccttgctaaacctcacc 115  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||| |||||| ||||||||||||||    
T  12800424 agtatgataaggatgtgttcttggtttgatctaatggtcaaaaactaactttcccatggtgggaaaaaagtagttttcccatgctaaacctcacc 12800518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 21 - 115
Target Start/End: Original strand, 28371657 - 28371751
Alignment:
Q  21 agtatgataaggatgtgttcttggtttgatttaatggtcaaaaactaactttcccatggtgggaaaaaattagctttcccttgctaaacctcacc 115  Q
    ||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||    
T  28371657 agtatgataaggatgtgtttttggtttgatctaatggtcaaaaactaactttcccatggtgggaaaaaagtagctttcccatgctaaacctcacc 28371751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 19 - 115
Target Start/End: Complemental strand, 12800085 - 12799989
Alignment:
Q  19 gaagtatgataaggatgtgttcttggtttgatttaatggtcaaaaactaactttcccatggtgggaaaaaattagctttcccttgctaaacctcacc 115  Q
    ||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||| | |||||| |||||||||| | ||||||||||||    
T  12800085 gaagtatgataaggatgtgtttttggtttgatctaatggtcaaaaactaactttcccatggtagaaaaaaagtagctttcccatactaaacctcacc 12799989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 21 - 113
Target Start/End: Original strand, 48153113 - 48153205
Alignment:
Q  21 agtatgataaggatgtgttcttggtttgatttaatggtcaaaaactaactttcccatggtgggaaaaaattagctttcccttgctaaacctca 113  Q
    |||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||  |||||||||| |||||||||| ||||||||||||    
T  48153113 agtatgataaggatgtgttcttggtttgatctaatgatcaaaaactaactttcccatattgggaaaaaagtagctttcccatgctaaacctca 48153205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 21 - 116
Target Start/End: Complemental strand, 50164331 - 50164236
Alignment:
Q  21 agtatgataaggatgtgttcttggtttgatttaatggtcaaaaactaactttcccatggtgggaaaaaattagctttcccttgctaaacctcacct 116  Q
    |||||||||||||||| ||||||||||||| ||||||||| |||||||||||||||| ||||||||||| ||| |||||| |||||||||||||||    
T  50164331 agtatgataaggatgtattcttggtttgatctaatggtcataaactaactttcccatagtgggaaaaaagtagttttcccatgctaaacctcacct 50164236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 21 - 115
Target Start/End: Original strand, 2821443 - 2821537
Alignment:
Q  21 agtatgataaggatgtgttcttggtttgatttaatggtcaaaaactaactttcccatggtgggaaaaaattagctttcccttgctaaacctcacc 115  Q
    |||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||| ||| |||| | | ||||||||||||    
T  2821443 agtatgataaggatgtgttcttggtttgatctaatggtcaaaaattaactttcccatggtgggaaaaaagtagttttctcatactaaacctcacc 2821537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 21 - 116
Target Start/End: Original strand, 33631044 - 33631139
Alignment:
Q  21 agtatgataaggatgtgttcttggtttgatttaatggtcaaaaactaactttcccatggtgggaaaaaattagctttcccttgctaaacctcacct 116  Q
    |||||| ||||||||||||||| ||||||| ||||||||||||||||| |||||||||||||||||||| ||| |||||| ||||||| |||||||    
T  33631044 agtatggtaaggatgtgttcttcgtttgatctaatggtcaaaaactaattttcccatggtgggaaaaaagtagttttcccatgctaaatctcacct 33631139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 21 - 115
Target Start/End: Original strand, 43756301 - 43756395
Alignment:
Q  21 agtatgataaggatgtgttcttggtttgatttaatggtcaaaaactaactttcccatggtgggaaaaaattag-ctttcccttgctaaacctcacc 115  Q
    |||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||| ||||||| |||||||| |||||    
T  43756301 agtatggtaaggatgtgttcttggtttgatttaatggttaaaaactaactttcccatggt-ggaaaaaattagtctttcccatgctaaacttcacc 43756395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 21 - 115
Target Start/End: Original strand, 50164663 - 50164757
Alignment:
Q  21 agtatgataaggatgtgttcttggtttgatttaatggtcaaaaactaactttcccatggtgggaaaaaattagctttcccttgctaaacctcacc 115  Q
    ||||||||||||||||||||||| |||||| ||||||||||||||||||||||| ||||||| |||||| ||| |||||| | ||||||||||||    
T  50164663 agtatgataaggatgtgttcttgatttgatctaatggtcaaaaactaactttcctatggtggaaaaaaagtagttttcccatactaaacctcacc 50164757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 21 - 116
Target Start/End: Complemental strand, 28371293 - 28371198
Alignment:
Q  21 agtatgataaggatgtgttcttggtttgatttaatggtcaaaaactaactttcccatggtgggaaaaaattagctttcccttgctaaacctcacct 116  Q
    |||||||||| ||||||||||||||||||| |||||||||||||||||||||  |||||| |||||||| || ||||||| | |||||||||||||    
T  28371293 agtatgataaagatgtgttcttggtttgatctaatggtcaaaaactaactttttcatggtaggaaaaaagtaactttcccatactaaacctcacct 28371198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 16 - 118
Target Start/End: Original strand, 38469234 - 38469336
Alignment:
Q  16 gatgaagtatgataaggatgtgttcttggtttgatttaatggtcaaaaactaactttcccatggtgggaaaaaattag-ctttcccttgctaaacctcac 114  Q
    |||| |||||| |||||||||||||||| |||||| ||||||| ||||||||||||||||||||| |||||||||||| ||||||| |||||||| ||||    
T  38469234 gatggagtatggtaaggatgtgttcttgatttgatctaatggttaaaaactaactttcccatggt-ggaaaaaattagcctttcccatgctaaacttcac 38469332  T
Q  115 ctat 118  Q
    ||||    
T  38469333 ctat 38469336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 21 - 115
Target Start/End: Complemental strand, 43755943 - 43755849
Alignment:
Q  21 agtatgataaggatgtgttcttggtttgatttaatggtcaaaaactaactttcccatggtgggaaaaaattag-ctttcccttgctaaacctcacc 115  Q
    |||||| ||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||| |||||||| ||||||| |||||||| |||||    
T  43755943 agtatggtaaggatgtgttcttggtttgatctaatggttaaaaactaactttcccatggtggga-aaaattagcctttcccatgctaaacttcacc 43755849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 21 - 116
Target Start/End: Original strand, 38328840 - 38328935
Alignment:
Q  21 agtatgataaggatgtgttcttggtttgatttaatggtcaaaaactaactttcccatggtgggaaaaaattag-ctttcccttgctaaacctcacct 116  Q
    |||||||||||||||||||||||||||||| ||||| | ||||||||||||||||||| |||| ||||||||| ||||||| |||||||| ||||||    
T  38328840 agtatgataaggatgtgttcttggtttgatctaatgattaaaaactaactttcccatgatggg-aaaaattagtctttcccatgctaaacttcacct 38328935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 52 - 117
Target Start/End: Original strand, 17151864 - 17151929
Alignment:
Q  52 taatggtcaaaaactaactttcccatggtgggaaaaaattagctttcccttgctaaacctcaccta 117  Q
    ||||||||||||||||||||||||||||||| |||||| |||||||||| ||||||||||||||||    
T  17151864 taatggtcaaaaactaactttcccatggtggaaaaaaagtagctttcccatgctaaacctcaccta 17151929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 21 - 117
Target Start/End: Complemental strand, 38469000 - 38468904
Alignment:
Q  21 agtatgataaggatgtgttcttggtttgatttaatggtcaaaaactaactttcccatggtgggaaaaaattag-ctttcccttgctaaacctcaccta 117  Q
    |||||| |||||||||||||||| ||| || ||||||| ||||||||||||||||||||||||| |||||||| ||||||| |||||||| |||||||    
T  38469000 agtatggtaaggatgtgttcttgatttaatataatggttaaaaactaactttcccatggtggga-aaaattagcctttcccatgctaaacttcaccta 38468904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 49 - 117
Target Start/End: Complemental strand, 33630543 - 33630475
Alignment:
Q  49 atttaatggtcaaaaactaactttcccatggtgggaaaaaattagctttcccttgctaaacctcaccta 117  Q
    |||||||||||||||||||||||||||||||||| ||| || |||||||||| ||||||||||||||||    
T  33630543 atttaatggtcaaaaactaactttcccatggtggaaaataagtagctttcccatgctaaacctcaccta 33630475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 21 - 87
Target Start/End: Complemental strand, 38328481 - 38328415
Alignment:
Q  21 agtatgataaggatgtgttcttggtttgatttaatggtcaaaaactaactttcccatggtgggaaaa 87  Q
    |||||| ||||||| ||||||||||||||| ||||||| ||||||||||||| ||||| | ||||||    
T  38328481 agtatggtaaggatttgttcttggtttgatctaatggttaaaaactaacttttccatgataggaaaa 38328415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 55 - 116
Target Start/End: Complemental strand, 17151062 - 17151001
Alignment:
Q  55 tggtcaaaaactaactttcccatggtgggaaaaaattagctttcccttgctaaacctcacct 116  Q
    |||||||||| |||||||||||||||||||||||     ||||||| |||||||||||||||    
T  17151062 tggtcaaaaaataactttcccatggtgggaaaaaccagcctttcccatgctaaacctcacct 17151001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 53 - 88
Target Start/End: Complemental strand, 32537707 - 32537672
Alignment:
Q  53 aatggtcaaaaactaactttcccatggtgggaaaaa 88  Q
    |||||| |||||||||||||||||||||||||||||    
T  32537707 aatggttaaaaactaactttcccatggtgggaaaaa 32537672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 53 - 115
Target Start/End: Original strand, 32538488 - 32538550
Alignment:
Q  53 aatggtcaaaaactaactttcccatggtgggaaaaaattag-ctttcccttgctaaacctcacc 115  Q
    |||||| ||||||||||||| |||||||||| ||||||||| ||||||| |||||||| |||||    
T  32538488 aatggttaaaaactaacttttccatggtggg-aaaaattagcctttcccatgctaaacttcacc 32538550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 60 - 89
Target Start/End: Original strand, 45065378 - 45065407
Alignment:
Q  60 aaaaactaactttcccatggtgggaaaaaa 89  Q
    ||||||||||||||||||||||||||||||    
T  45065378 aaaaactaactttcccatggtgggaaaaaa 45065407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 86; Significance: 6e-41; HSPs: 17)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 21 - 118
Target Start/End: Original strand, 28983246 - 28983343
Alignment:
Q  21 agtatgataaggatgtgttcttggtttgatttaatggtcaaaaactaactttcccatggtgggaaaaaattagctttcccttgctaaacctcacctat 118  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||    
T  28983246 agtatgataaggatgtgttcttggtttgatctaatggtcaaaaactaactttcccatggtgggaaaaaagtagctttcccatgctaaacctcacctat 28983343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 21 - 117
Target Start/End: Original strand, 34717709 - 34717805
Alignment:
Q  21 agtatgataaggatgtgttcttggtttgatttaatggtcaaaaactaactttcccatggtgggaaaaaattagctttcccttgctaaacctcaccta 117  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||    
T  34717709 agtatgataaggatgtgttcttggtttgatctaatggtcaaaaactaactttcccatggtgggaaaaaagtagctttcccatgctaaacctcaccta 34717805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 21 - 116
Target Start/End: Complemental strand, 34717336 - 34717241
Alignment:
Q  21 agtatgataaggatgtgttcttggtttgatttaatggtcaaaaactaactttcccatggtgggaaaaaattagctttcccttgctaaacctcacct 116  Q
    ||||||||||||| ||||||||| |||||| ||||| |||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||    
T  34717336 agtatgataaggacgtgttcttgatttgatctaatgatcaaaaactaactttcccatggtgggaaaaaagtagctttcccatgctaaacctcacct 34717241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 21 - 115
Target Start/End: Original strand, 19062777 - 19062871
Alignment:
Q  21 agtatgataaggatgtgttcttggtttgatttaatggtcaaaaactaactttcccatggtgggaaaaaattagctttcccttgctaaacctcacc 115  Q
    ||||||||||||||||||| |||||||||| |||||||||||||||||||||| ||||||||||||||| |||||||||| ||||||| ||||||    
T  19062777 agtatgataaggatgtgtttttggtttgatctaatggtcaaaaactaactttctcatggtgggaaaaaagtagctttcccatgctaaagctcacc 19062871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 19 - 109
Target Start/End: Original strand, 28535415 - 28535506
Alignment:
Q  19 gaagtatgataaggatgtgttcttggtttgatttaatggtcaaaaactaactttcccatggtgg-gaaaaaattagctttcccttgctaaac 109  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||  |||||| |||||||||| ||||||||    
T  28535415 gaagtatgataaggatgtgttcttggtttgatctaatggtcaaaaactaactttcctatggtggaaaaaaaagtagctttcccatgctaaac 28535506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 21 - 117
Target Start/End: Original strand, 7635589 - 7635685
Alignment:
Q  21 agtatgataaggatgtgttcttggtttgatttaatggtcaaaaactaactttcccatggtgggaaaaaattag-ctttcccttgctaaacctcaccta 117  Q
    |||||| ||||||||||||||||||||||| ||||||| |||||||||||||||||||||||| ||||||||| ||||||| |||||||| |||||||    
T  7635589 agtatggtaaggatgtgttcttggtttgatctaatggttaaaaactaactttcccatggtggg-aaaaattagtctttcccatgctaaacttcaccta 7635685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 21 - 115
Target Start/End: Complemental strand, 28982875 - 28982782
Alignment:
Q  21 agtatgataaggatgtgttcttggtttgatttaatggtcaaaaactaactttcccatggtgggaaaaaattagctttcccttgctaaacctcacc 115  Q
    ||||||||||||||||||||||||||||||  |||||||||||||||||||||||||| |  ||||||| ||| |||||| ||||||||||||||    
T  28982875 agtatgataaggatgtgttcttggtttgatcgaatggtcaaaaactaactttcccatgat-agaaaaaagtagttttcccatgctaaacctcacc 28982782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 21 - 116
Target Start/End: Complemental strand, 7635218 - 7635123
Alignment:
Q  21 agtatgataaggatgtgttcttggtttgatttaatggtcaaaaactaactttcccatggtgggaaaaaattag-ctttcccttgctaaacctcacct 116  Q
    |||||| ||||||||||||||| ||||||| ||||||| ||||||||||||||||||||||||| |||||||| ||||||| |||||||| ||||||    
T  7635218 agtatggtaaggatgtgttcttagtttgatctaatggttaaaaactaactttcccatggtggga-aaaattagcctttcccatgctaaacttcacct 7635123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 21 - 115
Target Start/End: Original strand, 18290449 - 18290543
Alignment:
Q  21 agtatgataaggatgtgttcttggtttgatttaatggtcaaaaactaactttcccatggtgggaaaaaattag-ctttcccttgctaaacctcacc 115  Q
    |||||| ||||||| ||||||||||||||| ||||||| |||||||||||||||||||||||| ||||||||| ||||||| |||||||| |||||    
T  18290449 agtatggtaaggatttgttcttggtttgatctaatggttaaaaactaactttcccatggtggg-aaaaattagcctttcccatgctaaacttcacc 18290543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 47 - 116
Target Start/End: Original strand, 2924952 - 2925021
Alignment:
Q  47 tgatttaatggtcaaaaactaactttcccatggtgggaaaaaattagctttcccttgctaaacctcacct 116  Q
    |||| ||||||||||||||||||||||| |||||||||||||| |||||||||| |||||||||||||||    
T  2924952 tgatctaatggtcaaaaactaactttcctatggtgggaaaaaagtagctttcccatgctaaacctcacct 2925021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 21 - 116
Target Start/End: Complemental strand, 18290309 - 18290214
Alignment:
Q  21 agtatgataaggatgtgttcttggtttgatttaatggtcaaaaactaactttcccatggtgggaaaaaattagc-tttcccttgctaaacctcacct 116  Q
    |||||| ||||||| ||||||||||||||| ||||||| ||||| ||||||||||||||||||| ||||||||| |||||| |||||||| ||||||    
T  18290309 agtatggtaaggatttgttcttggtttgatctaatggttaaaaattaactttcccatggtggga-aaaattagcttttcccatgctaaacttcacct 18290214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 21 - 116
Target Start/End: Complemental strand, 4348941 - 4348846
Alignment:
Q  21 agtatgataaggatgtgttcttggtttgatttaatggtcaaaaactaactttcccatggtgggaaaaaattagctttcccttgctaaacctcacct 116  Q
    |||||| ||||||||||||||||||||||| ||||||| |||||| |||||||  ||||||| ||||| | | ||||| | |||||||| ||||||    
T  4348941 agtatggtaaggatgtgttcttggtttgatctaatggttaaaaacaaactttcttatggtggaaaaaattaatctttctcatgctaaacttcacct 4348846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 21 - 88
Target Start/End: Original strand, 12999431 - 12999498
Alignment:
Q  21 agtatgataaggatgtgttcttggtttgatttaatggtcaaaaactaactttcccatggtgggaaaaa 88  Q
    |||||| ||||||| ||||||||||||||| ||||||| |||||||||||| | ||||||||||||||    
T  12999431 agtatggtaaggatatgttcttggtttgatctaatggttaaaaactaacttgctcatggtgggaaaaa 12999498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 52 - 89
Target Start/End: Original strand, 10608304 - 10608341
Alignment:
Q  52 taatggtcaaaaactaactttcccatggtgggaaaaaa 89  Q
    ||||||||||||||||||||||||||||||||||||||    
T  10608304 taatggtcaaaaactaactttcccatggtgggaaaaaa 10608341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 70 - 114
Target Start/End: Complemental strand, 14496489 - 14496445
Alignment:
Q  70 tttcccatggtgggaaaaaattagctttcccttgctaaacctcac 114  Q
    |||||||||||| ||||||| |||||||||| |||||||||||||    
T  14496489 tttcccatggtgagaaaaaagtagctttcccatgctaaacctcac 14496445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 52 - 89
Target Start/End: Complemental strand, 930988 - 930950
Alignment:
Q  52 taatggtcaaaaactaac-tttcccatggtgggaaaaaa 89  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  930988 taatggtcaaaaactaacttttcccatggtgggaaaaaa 930950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 53 - 109
Target Start/End: Original strand, 18605845 - 18605901
Alignment:
Q  53 aatggtcaaaaactaactttcccatggtgggaaaaaattag-ctttcccttgctaaac 109  Q
    |||||| |||||| |||||||||||||| |||||||||||| ||||||| ||||||||    
T  18605845 aatggttaaaaacaaactttcccatggt-ggaaaaaattagcctttcccatgctaaac 18605901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 84; Significance: 9e-40; HSPs: 23)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 21 - 116
Target Start/End: Complemental strand, 20559840 - 20559745
Alignment:
Q  21 agtatgataaggatgtgttcttggtttgatttaatggtcaaaaactaactttcccatggtgggaaaaaattagctttcccttgctaaacctcacct 116  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||| |||||||||||||||    
T  20559840 agtatgataaggatgtgttcttggtttgatttaatggtcaaaaactaactttcccatggtggaaaaaaaatagctttcccatgctaaacctcacct 20559745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 21 - 116
Target Start/End: Original strand, 20560235 - 20560330
Alignment:
Q  21 agtatgataaggatgtgttcttggtttgatttaatggtcaaaaactaactttcccatggtgggaaaaaattagctttcccttgctaaacctcacct 116  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||  |||||||||| |||||||||||||||    
T  20560235 agtatgataaggatgtgttcttggtttgatctaatggtcaaaaactaactttcccatggtgggaaaaatatagctttcccatgctaaacctcacct 20560330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 21 - 115
Target Start/End: Complemental strand, 33139868 - 33139774
Alignment:
Q  21 agtatgataaggatgtgttcttggtttgatttaatggtcaaaaactaactttcccatggtgggaaaaaattagctttcccttgctaaacctcacc 115  Q
    |||||||||||||||||||||||||||||| |||||||||||||| ||||||| |||||||| |||||| |||||||||| ||||||||||||||    
T  33139868 agtatgataaggatgtgttcttggtttgatctaatggtcaaaaaccaactttctcatggtggaaaaaaagtagctttcccatgctaaacctcacc 33139774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 21 - 115
Target Start/End: Original strand, 33140248 - 33140342
Alignment:
Q  21 agtatgataaggatgtgttcttggtttgatttaatggtcaaaaactaactttcccatggtgggaaaaaattagctttcccttgctaaacctcacc 115  Q
    |||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||| || ||||||| | ||||||||||||    
T  33140248 agtatgataaggatgtgttcttagtttgatctaatggtcaaaaactaactttcccatggtgggaaaaaagtaactttcccatactaaacctcacc 33140342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 21 - 116
Target Start/End: Original strand, 42901090 - 42901185
Alignment:
Q  21 agtatgataaggatgtgttcttggtttgatttaatggtcaaaaactaactttcccatggtgggaaaaaattagctttcccttgctaaacctcacct 116  Q
    ||||||||||  |||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||  | |||||||||||||||    
T  42901090 agtatgataacaatgtgttcttggtttgatctaatggtcaaaaactaactttcccatggtgggaaaaaaatagctttttcatgctaaacctcacct 42901185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 21 - 115
Target Start/End: Complemental strand, 4179731 - 4179637
Alignment:
Q  21 agtatgataaggatgtgttcttggtttgatttaatggtcaaaaactaactttcccatggtgggaaaaaattagctttcccttgctaaacctcacc 115  Q
    |||||| ||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||| ||| |||| | ||||||||||||||    
T  4179731 agtatggtaaggatgtgttcttggtttgatctaatggtcaaatactaactttcccatggtgggaaaaaaatagttttctcatgctaaacctcacc 4179637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 21 - 116
Target Start/End: Original strand, 4180292 - 4180387
Alignment:
Q  21 agtatgataaggatgtgttcttggtttgatttaatggtcaaaaactaactttcccatggtgggaaaaaattagctttcccttgctaaacctcacct 116  Q
    |||||| ||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||  ||||||| || || ||||||||||||    
T  4180292 agtatggtaaggatgtgttcttagtttgatctaatggtcaaaaactaactttcccatggtgggaaaaatgtagcttttccatgttaaacctcacct 4180387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 21 - 115
Target Start/End: Complemental strand, 42900741 - 42900647
Alignment:
Q  21 agtatgataaggatgtgttcttggtttgatttaatggtcaaaaactaactttcccatggtgggaaaaaattagctttcccttgctaaacctcacc 115  Q
    ||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||  |||||| || |||| || ||||||||||||||    
T  42900741 agtatgataaggatgtgttcttgatttgatctaatggtcaaaaactaactttcccatggtgaaaaaaaagtaccttttccatgctaaacctcacc 42900647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 21 - 115
Target Start/End: Original strand, 40641124 - 40641218
Alignment:
Q  21 agtatgataaggatgtgttcttggtttgatttaatggtcaaaaactaactttcccatggtgggaaaaaattagctttcccttgctaaacctcacc 115  Q
    ||||||||||||||||||||||| |||||| |||||||||||||||||||||||||| ||   |||||| || ||||||| ||||||||||||||    
T  40641124 agtatgataaggatgtgttcttgatttgatctaatggtcaaaaactaactttcccatagtaaaaaaaaagtaactttcccatgctaaacctcacc 40641218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 21 - 117
Target Start/End: Complemental strand, 30414275 - 30414179
Alignment:
Q  21 agtatgataaggatgtgttcttggtttgatttaatggtcaaaaactaactttcccatggtgggaaaaaattag-ctttcccttgctaaacctcaccta 117  Q
    |||||| ||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||| |||||||| ||||||| | |||||| |||||||    
T  30414275 agtatggtaaggatgtgttcttggtttgatctaatggttaaaaactaactttcccatggtggga-aaaattagcctttcccatactaaacttcaccta 30414179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 21 - 117
Target Start/End: Complemental strand, 25137506 - 25137410
Alignment:
Q  21 agtatgataaggatgtgttcttggtttgatttaatggtcaaaaactaactttcccatggtgggaaaaaattag-ctttcccttgctaaacctcaccta 117  Q
    |||||| |||||||||||| ||| |||||| ||||||| ||||||||||||||||||||||||| |||||||| ||||||| |||||||| |||||||    
T  25137506 agtatggtaaggatgtgttattgatttgatctaatggttaaaaactaactttcccatggtggga-aaaattagcctttcccatgctaaacttcaccta 25137410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 16 - 77
Target Start/End: Complemental strand, 35212001 - 35211940
Alignment:
Q  16 gatgaagtatgataaggatgtgttcttggtttgatttaatggtcaaaaactaactttcccat 77  Q
    |||||||||||||||| ||||||||||| |||||||||||||||||||||||||||| ||||    
T  35212001 gatgaagtatgataagaatgtgttcttgatttgatttaatggtcaaaaactaacttttccat 35211940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 24 - 115
Target Start/End: Complemental strand, 40640741 - 40640653
Alignment:
Q  24 atgataaggatgtgttcttggtttgatttaatggtcaaaaactaactttcccatggtgggaaaaaattagctttcccttgctaaacctcacc 115  Q
    ||||||| ||||||||||||||||||||||||| | ||||||||||||||||   ||||||||||| ||  |||||| ||||||||||||||    
T  40640741 atgataatgatgtgttcttggtttgatttaatgattaaaaactaactttccc---gtgggaaaaaagtaattttcccatgctaaacctcacc 40640653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 21 - 115
Target Start/End: Original strand, 25137878 - 25137973
Alignment:
Q  21 agtatgataaggatgtgttcttgg-tttgatttaatggtcaaaaactaactttcccatggtgggaaaaaattag-ctttcccttgctaaacctcacc 115  Q
    |||||| ||||||||||||||| | |||||| ||||||| ||||||||| |||||||||||||| ||||||||| ||||||| |||||||| |||||    
T  25137878 agtatggtaaggatgtgttctttgatttgatctaatggttaaaaactaattttcccatggtggg-aaaaattagtctttcccatgctaaacttcacc 25137973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 54 - 115
Target Start/End: Complemental strand, 33686987 - 33686926
Alignment:
Q  54 atggtcaaaaactaactttcccatggtgggaaaaaattagctttcccttgctaaacctcacc 115  Q
    ||||| ||||||||||||||||||||||||||||| | | ||||||| |||||||| |||||    
T  33686987 atggttaaaaactaactttcccatggtgggaaaaattaacctttcccatgctaaacttcacc 33686926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 52 - 89
Target Start/End: Complemental strand, 29006411 - 29006374
Alignment:
Q  52 taatggtcaaaaactaactttcccatggtgggaaaaaa 89  Q
    ||||||| ||||||||||||||||||||||||||||||    
T  29006411 taatggttaaaaactaactttcccatggtgggaaaaaa 29006374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 52 - 89
Target Start/End: Original strand, 29007183 - 29007220
Alignment:
Q  52 taatggtcaaaaactaactttcccatggtgggaaaaaa 89  Q
    ||||||| ||||||||||||||||||||||||||||||    
T  29007183 taatggttaaaaactaactttcccatggtgggaaaaaa 29007220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 53 - 90
Target Start/End: Original strand, 41224828 - 41224865
Alignment:
Q  53 aatggtcaaaaactaactttcccatggtgggaaaaaat 90  Q
    |||||| |||||||||||||||||||||||||||||||    
T  41224828 aatggttaaaaactaactttcccatggtgggaaaaaat 41224865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 53 - 116
Target Start/End: Original strand, 33687735 - 33687798
Alignment:
Q  53 aatggtcaaaaactaactttcccatggtgggaaaaaattag-ctttcccttgctaaacctcacct 116  Q
    |||||| |||||||||||||| |||||| |||||||||||| ||||||| |||||||| ||||||    
T  33687735 aatggttaaaaactaactttctcatggt-ggaaaaaattagcctttcccatgctaaacttcacct 33687798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 45 - 118
Target Start/End: Complemental strand, 42607151 - 42607078
Alignment:
Q  45 tttgatttaatggtcaaaaactaactttcccatggtgggaaaaaatt-agctttcccttgctaaacctcacctat 118  Q
    |||||| |||||| ||||||| |||||||||||||||||||| ||||   ||||||| ||||||||| |||||||    
T  42607151 tttgatctaatggacaaaaac-aactttcccatggtgggaaacaattcccctttcccatgctaaaccccacctat 42607078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 55 - 88
Target Start/End: Original strand, 35613231 - 35613264
Alignment:
Q  55 tggtcaaaaactaactttcccatggtgggaaaaa 88  Q
    |||||||||||||||||| |||||||||||||||    
T  35613231 tggtcaaaaactaacttttccatggtgggaaaaa 35613264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 52 - 89
Target Start/End: Complemental strand, 44896110 - 44896073
Alignment:
Q  52 taatggtcaaaaactaactttcccatggtgggaaaaaa 89  Q
    ||||||| |||||||||||||||||||||||| |||||    
T  44896110 taatggttaaaaactaactttcccatggtggggaaaaa 44896073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 53 - 89
Target Start/End: Complemental strand, 29314644 - 29314608
Alignment:
Q  53 aatggtcaaaaactaactttcccatggtgggaaaaaa 89  Q
    |||||| ||||||||||||||||||||||| ||||||    
T  29314644 aatggttaaaaactaactttcccatggtggaaaaaaa 29314608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 83; Significance: 3e-39; HSPs: 30)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 21 - 115
Target Start/End: Original strand, 930387 - 930481
Alignment:
Q  21 agtatgataaggatgtgttcttggtttgatttaatggtcaaaaactaactttcccatggtgggaaaaaattagctttcccttgctaaacctcacc 115  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||    
T  930387 agtatgataaggatgtgttcttggtttgatctaatggtcaaaaactaactttcccatggtgggaaaaaagtagctttcccatgctaaacctcacc 930481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 21 - 116
Target Start/End: Original strand, 11442109 - 11442204
Alignment:
Q  21 agtatgataaggatgtgttcttggtttgatttaatggtcaaaaactaactttcccatggtgggaaaaaattagctttcccttgctaaacctcacct 116  Q
    |||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||    
T  11442109 agtatgataaggatgtgttctttgtttgatctaatggtcaaaaactaactttcccatggtgggaaaaaagtagctttcccatgctaaacctcacct 11442204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 21 - 116
Target Start/End: Complemental strand, 930005 - 929910
Alignment:
Q  21 agtatgataaggatgtgttcttggtttgatttaatggtcaaaaactaactttcccatggtgggaaaaaattagctttcccttgctaaacctcacct 116  Q
    ||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||| ||| |||||| |||||||||||||||    
T  930005 agtatgataaggatgtgttattggtttgatctaatggtcaaaaactaactttcccatggtgggaaaaaagtagatttcccatgctaaacctcacct 929910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 21 - 115
Target Start/End: Original strand, 21166110 - 21166204
Alignment:
Q  21 agtatgataaggatgtgttcttggtttgatttaatggtcaaaaactaactttcccatggtgggaaaaaattagctttcccttgctaaacctcacc 115  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||| || ||||||| ||||||||||||||    
T  21166110 agtatgataaggatgtgttcttggtttgatctaatggtcaaaaactaattttcccatggtgggaaaaaagtaactttcccatgctaaacctcacc 21166204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 21 - 115
Target Start/End: Complemental strand, 32473855 - 32473761
Alignment:
Q  21 agtatgataaggatgtgttcttggtttgatttaatggtcaaaaactaactttcccatggtgggaaaaaattagctttcccttgctaaacctcacc 115  Q
    ||||| |||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||| |||||||||| ||||||||||||||    
T  32473855 agtataataaggatgtgttcttggtttgatctaatggtcaaaaactaactttcccatagtgggaaaaaagtagctttcccatgctaaacctcacc 32473761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 21 - 114
Target Start/End: Complemental strand, 42257308 - 42257215
Alignment:
Q  21 agtatgataaggatgtgttcttggtttgatttaatggtcaaaaactaactttcccatggtgggaaaaaattagctttcccttgctaaacctcac 114  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||| |||||| |||||||||||||    
T  42257308 agtatgataaagatgtgttcttggtttgatttaatggtcaaaaactaacttttccatggtgggaaaaaagtagttttcccatgctaaacctcac 42257215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 21 - 116
Target Start/End: Original strand, 32474416 - 32474511
Alignment:
Q  21 agtatgataaggatgtgttcttggtttgatttaatggtcaaaaactaactttcccatggtgggaaaaaattagctttcccttgctaaacctcacct 116  Q
    |||||| |||||||| |||||| ||||||| |||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||    
T  32474416 agtatggtaaggatgcgttcttcgtttgatctaatggtcaaaaactaactttcccatggtgggaaaaaagtagctttcccatgctaaacctcacct 32474511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 19 - 109
Target Start/End: Original strand, 38000244 - 38000334
Alignment:
Q  19 gaagtatgataaggatgtgttcttggtttgatttaatggtcaaaaactaactttcccatggtgggaaaaaattagctttcccttgctaaac 109  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||  ||||||||| ||||||||    
T  38000244 gaagtatgataaggatgtgttcttggtttgatctaatggtcaaaaactaacttttccatggtgggaaaaaagcagctttcccatgctaaac 38000334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 19 - 117
Target Start/End: Original strand, 14788552 - 14788650
Alignment:
Q  19 gaagtatgataaggatgtgttcttggtttgatttaatggtcaaaaactaactttcccatggtgggaaaaaattagctttcccttgctaaacctcaccta 117  Q
    ||||||||||||| |||| ||||||||||||| ||||||||||||||||||||||||||| | |||||||| |||||||||| || |||||||||||||    
T  14788552 gaagtatgataagaatgtcttcttggtttgatctaatggtcaaaaactaactttcccatgataggaaaaaagtagctttcccatgttaaacctcaccta 14788650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 21 - 117
Target Start/End: Complemental strand, 43521168 - 43521075
Alignment:
Q  21 agtatgataaggatgtgttcttggtttgatttaatggtcaaaaactaactttcccatggtgggaaaaaattagctttcccttgctaaacctcaccta 117  Q
    ||||||||||||||||||    |||||||| |||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||    
T  43521168 agtatgataaggatgtgta---ggtttgatctaatggtcaaaaactaactttcccatggtgggaaaaaagtagctttcccatgctaaacctcaccta 43521075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 21 - 114
Target Start/End: Complemental strand, 50766723 - 50766631
Alignment:
Q  21 agtatgataaggatgtgttcttggtttgatttaatggtcaaaaactaactttcccatggtgggaaaaaattagctttcccttgctaaacctcac 114  Q
    ||||||||||| |||||||||||||||||| ||||||||||||| ||||||| |||||||||||||||| |||||||||| |||||||||||||    
T  50766723 agtatgataagaatgtgttcttggtttgatctaatggtcaaaaattaacttt-ccatggtgggaaaaaagtagctttcccatgctaaacctcac 50766631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 21 - 118
Target Start/End: Original strand, 26006732 - 26006829
Alignment:
Q  21 agtatgataaggatgtgttcttggtttgatttaatggtcaaaaactaactttcccatggtgggaaaaaattag-ctttcccttgctaaacctcacctat 118  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||| |||| |||| ||||||||| ||||||| |||||||| ||||||||    
T  26006732 agtatgataaggatgtgttcttggtttgatctaatggtcaaaaactaactttctcatgatggg-aaaaattagcctttcccatgctaaacttcacctat 26006829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 21 - 116
Target Start/End: Complemental strand, 5113292 - 5113197
Alignment:
Q  21 agtatgataaggatgtgttcttggtttgatttaatggtcaaaaactaactttcccatggtgggaaaaaattag-ctttcccttgctaaacctcacct 116  Q
    |||||| ||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||| |||||||| ||||||| |||||||| ||||||    
T  5113292 agtatggtaaggatgtgttcttggtttgatctaatggttaaaaactaactttcccatggtggga-aaaattagcctttcccatgctaaacttcacct 5113197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 21 - 100
Target Start/End: Complemental strand, 11441743 - 11441664
Alignment:
Q  21 agtatgataaggatgtgttcttggtttgatttaatggtcaaaaactaactttcccatggtgggaaaaaattagctttccc 100  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||  |||||| || |||||||    
T  11441743 agtatgataaggatgtgttcttggtttgatctaatggtcaaaaactaactttcccatggtgaaaaaaaagtaactttccc 11441664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 21 - 115
Target Start/End: Original strand, 20586538 - 20586632
Alignment:
Q  21 agtatgataaggatgtgttcttggtttgatttaatggtcaaaaactaactttcccatggtgggaaaaaattag-ctttcccttgctaaacctcacc 115  Q
    |||||| ||||||||||||||||||||||| ||||||| |||||||||||||||||||||||| ||||||||| ||||||| |||||||| |||||    
T  20586538 agtatggtaaggatgtgttcttggtttgatctaatggttaaaaactaactttcccatggtggg-aaaaattagcctttcccatgctaaacttcacc 20586632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 21 - 115
Target Start/End: Original strand, 24394688 - 24394782
Alignment:
Q  21 agtatgataaggatgtgttcttggtttgatttaatggtcaaaaactaactttcccatggtgggaaaaaattagc-tttcccttgctaaacctcacc 115  Q
    |||||| ||||||||||||||||||||||| ||||||| |||||||||||||||||||||||| |||||||||| |||||| |||||||| |||||    
T  24394688 agtatggtaaggatgtgttcttggtttgatctaatggttaaaaactaactttcccatggtggg-aaaaattagcatttcccatgctaaacttcacc 24394782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 21 - 118
Target Start/End: Original strand, 5113662 - 5113759
Alignment:
Q  21 agtatgataaggatgtgttcttggtttgatttaatggtcaaaaactaactttcccatggtgggaaaaaattagctttcccttgctaaacctcacctat 118  Q
    |||||| ||||||||| ||||||||||||| ||||||| ||||||||||||||||||||||||||| | |  |||||||| |||||||| ||||||||    
T  5113662 agtatggtaaggatgtattcttggtttgatctaatggttaaaaactaactttcccatggtgggaaagattaggctttcccatgctaaacttcacctat 5113759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 21 - 117
Target Start/End: Original strand, 36992127 - 36992223
Alignment:
Q  21 agtatgataaggatgtgttcttggtttgatttaatggtcaaaaactaactttcccatggtgggaaaaaattag-ctttcccttgctaaacctcaccta 117  Q
    |||||| ||||||||||||||||||||||| ||||||| |||||||||||||||||||||||| ||||||||| ||||||| | |||||| |||||||    
T  36992127 agtatggtaaggatgtgttcttggtttgatctaatggttaaaaactaactttcccatggtggg-aaaaattagcctttcccatactaaacttcaccta 36992223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 21 - 117
Target Start/End: Original strand, 37017567 - 37017663
Alignment:
Q  21 agtatgataaggatgtgttcttggtttgatttaatggtcaaaaactaactttcccatggtgggaaaaaattag-ctttcccttgctaaacctcaccta 117  Q
    |||||| ||||||||||||||||||||||| ||||||| |||||||||||||||||||||||| ||||||||| ||||||| | |||||| |||||||    
T  37017567 agtatggtaaggatgtgttcttggtttgatctaatggttaaaaactaactttcccatggtggg-aaaaattagcctttcccatactaaacttcaccta 37017663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 21 - 115
Target Start/End: Complemental strand, 20586166 - 20586072
Alignment:
Q  21 agtatgataaggatgtgttcttggtttgatttaatggtcaaaaactaactttcccatggtgggaaaaaattag-ctttcccttgctaaacctcacc 115  Q
    |||||| |||||||||||||||| |||||| ||||||| ||||||||||||||||||||||||| |||||||| ||||||| |||||||| |||||    
T  20586166 agtatggtaaggatgtgttcttgatttgatctaatggttaaaaactaactttcccatggtggga-aaaattagcctttcccatgctaaacttcacc 20586072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 21 - 88
Target Start/End: Original strand, 45000781 - 45000848
Alignment:
Q  21 agtatgataaggatgtgttcttggtttgatttaatggtcaaaaactaactttcccatggtgggaaaaa 88  Q
    |||||| ||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||    
T  45000781 agtatggtaaggatgtgttcttggtttgatctaatggttaaaaactaactttcccatggtgggaaaaa 45000848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 21 - 117
Target Start/End: Complemental strand, 14788368 - 14788272
Alignment:
Q  21 agtatgataaggatgtgttcttggtttgatttaatggtcaaaaactaactttcccatggtggg-aaaaaattagctttcccttgctaaacctcaccta 117  Q
    |||||||||| ||||||||||||||||| | |||||||||||||||||||||  ||||||||| |||||| ||| |||||| ||||||||||||||||    
T  14788368 agtatgataaagatgtgttcttggtttgttctaatggtcaaaaactaacttt-tcatggtgggaaaaaaagtagatttcccatgctaaacctcaccta 14788272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 21 - 115
Target Start/End: Complemental strand, 24394341 - 24394247
Alignment:
Q  21 agtatgataaggatgtgttcttggtttgatttaatggtcaaaaactaactttcccatggtgggaaaaaattag-ctttcccttgctaaacctcacc 115  Q
    |||||| ||||||||||||||||||||||| ||||||| ||||||||||||||| ||||| |||||||||||| ||||||| | |||||| |||||    
T  24394341 agtatgctaaggatgtgttcttggtttgatctaatggttaaaaactaactttcctatggt-ggaaaaaattagtctttcccatactaaacttcacc 24394247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 21 - 115
Target Start/End: Complemental strand, 26006240 - 26006146
Alignment:
Q  21 agtatgataaggatgtgttcttggtttgatttaatggtcaaaaactaactttcccatggtgggaaaaaattag-ctttcccttgctaaacctcacc 115  Q
    |||||| |||||||||||| || ||||||| ||||||| ||||||||||||||||||||||||| |||||||| ||||||| |||||||| |||||    
T  26006240 agtatggtaaggatgtgttattagtttgatctaatggttaaaaactaactttcccatggtggga-aaaattagcctttcccatgctaaacttcacc 26006146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 21 - 114
Target Start/End: Complemental strand, 45000409 - 45000316
Alignment:
Q  21 agtatgataaggatgtgttcttggtttgatttaatggtcaaaaactaactttcccatggtgggaaaaaattag-ctttcccttgctaaacctcac 114  Q
    |||||| |||||||||||||||| |||||| ||||||| |||||||||||||||||| ||||| ||||||||| ||||||| |||||||| ||||    
T  45000409 agtatggtaaggatgtgttcttgatttgatctaatggttaaaaactaactttcccatagtggg-aaaaattagcctttcccatgctaaacttcac 45000316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 21 - 116
Target Start/End: Original strand, 43104731 - 43104826
Alignment:
Q  21 agtatgataaggatgtgttcttggtttgatttaatggtcaaaaactaactttcccatggtgggaaaaaattagc-tttcccttgctaaacctcacct 116  Q
    |||||| ||| ||||||||||| ||||||| ||||||| ||||||||||||||||||  |||| |||||||||| |||||| |||||||| ||||||    
T  43104731 agtatggtaaagatgtgttcttcgtttgatctaatggttaaaaactaactttcccattatggg-aaaaattagcatttcccatgctaaacttcacct 43104826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 66 - 117
Target Start/End: Complemental strand, 50836265 - 50836214
Alignment:
Q  66 taactttcccatggtgggaaaaaattagctttcccttgctaaacctcaccta 117  Q
    |||||||||||||||||||||||| |||||||||| ||||||||||||||||    
T  50836265 taactttcccatggtgggaaaaaaatagctttcccatgctaaacctcaccta 50836214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 66 - 117
Target Start/End: Original strand, 50839588 - 50839639
Alignment:
Q  66 taactttcccatggtgggaaaaaattagctttcccttgctaaacctcaccta 117  Q
    |||||||||||||||||||||||| |||||||||| ||||||||||||||||    
T  50839588 taactttcccatggtgggaaaaaaatagctttcccatgctaaacctcaccta 50839639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 21 - 89
Target Start/End: Original strand, 42258016 - 42258083
Alignment:
Q  21 agtatgataaggatgtgttcttggtttgatttaatggtcaaaaactaactttcccatggtgggaaaaaa 89  Q
    ||||||||||| ||||||| ||| |||||| ||||||||||||||||||||||| ||| ||||||||||    
T  42258016 agtatgataag-atgtgttattgatttgatctaatggtcaaaaactaactttccaatgatgggaaaaaa 42258083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 74 - 111
Target Start/End: Original strand, 24181950 - 24181987
Alignment:
Q  74 ccatggtgggaaaaaattagctttcccttgctaaacct 111  Q
    |||||||||||||||| |||||||||| ||||||||||    
T  24181950 ccatggtgggaaaaaagtagctttcccatgctaaacct 24181987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 78; Significance: 3e-36; HSPs: 14)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 21 - 118
Target Start/End: Complemental strand, 14197753 - 14197656
Alignment:
Q  21 agtatgataaggatgtgttcttggtttgatttaatggtcaaaaactaactttcccatggtgggaaaaaattagctttcccttgctaaacctcacctat 118  Q
    ||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||| || ||||||| |||||||||||||||||    
T  14197753 agtatgataaggatgtgttcttgctttgatctaatggtcaaaaactaactttcccatggtgggaaaaaagtaactttcccatgctaaacctcacctat 14197656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 21 - 115
Target Start/End: Complemental strand, 37657941 - 37657847
Alignment:
Q  21 agtatgataaggatgtgttcttggtttgatttaatggtcaaaaactaactttcccatggtgggaaaaaattagctttcccttgctaaacctcacc 115  Q
    |||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||| | |||||| |||||||||| ||||||||||||||    
T  37657941 agtatgataaagatgtgttcttggtttgatctaatggtcaaaaactaactttcccatggtagaaaaaaagtagctttcccatgctaaacctcacc 37657847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 21 - 113
Target Start/End: Complemental strand, 39439852 - 39439760
Alignment:
Q  21 agtatgataaggatgtgttcttggtttgatttaatggtcaaaaactaactttcccatggtgggaaaaaattagctttcccttgctaaacctca 113  Q
    |||||||||||||||||||||||||||||| |||| |||||||||||||||| | ||| |||||||||| ||||||| || | ||||||||||    
T  39439852 agtatgataaggatgtgttcttggtttgatctaatagtcaaaaactaacttttctatgatgggaaaaaagtagcttttccatactaaacctca 39439760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 23 - 115
Target Start/End: Complemental strand, 41714695 - 41714603
Alignment:
Q  23 tatgataaggatgtgttcttggtttgatttaatggtcaaaaactaactttcccatggtgggaaaaaattagctttcccttgctaaacctcacc 115  Q
    |||||||||||||||||||||||||||| ||||| |||||||||||||||  |||| ||  |||||| |||||||||| ||||||||||||||    
T  41714695 tatgataaggatgtgttcttggtttgatctaatgatcaaaaactaactttttcatgatgaaaaaaaaatagctttcccatgctaaacctcacc 41714603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 21 - 115
Target Start/End: Complemental strand, 30846110 - 30846016
Alignment:
Q  21 agtatgataaggatgtgttcttggtttgatttaatggtcaaaaactaactttcccatggtgggaaaaaattag-ctttcccttgctaaacctcacc 115  Q
    |||||| ||||||||||||||||||||||| ||||||| ||||||||||||||| ||||||||| |||||||| ||||||| |||||||| |||||    
T  30846110 agtatggtaaggatgtgttcttggtttgatctaatggttaaaaactaactttcctatggtggga-aaaattagtctttcccatgctaaacttcacc 30846016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 21 - 116
Target Start/End: Original strand, 30846450 - 30846545
Alignment:
Q  21 agtatgataaggatgtgttcttggtttgatttaatggtcaaaaactaactttcccatggtgggaaaaaattag-ctttcccttgctaaacctcacct 116  Q
    |||||| ||||||| ||||||||||||||| ||||||| ||||||||| ||||||||||| |||||||||||| ||||||| |||||||| ||||||    
T  30846450 agtatggtaaggatatgttcttggtttgatctaatggttaaaaactaattttcccatggt-ggaaaaaattagcctttcccatgctaaacttcacct 30846545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 21 - 113
Target Start/End: Original strand, 39440553 - 39440644
Alignment:
Q  21 agtatgataaggatgtgttcttggtttgatttaatggtcaaaaactaactttcccatggtgggaaaaaattagctttcccttgctaaacctca 113  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||   ||||| |||||||| ||| |||| | ||||||||||||    
T  39440553 agtattataaggatgtgttcttggtttgatttaatggtcaaaaactaacttttttatggt-ggaaaaaagtagttttctcatgctaaacctca 39440644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 56 - 115
Target Start/End: Original strand, 31408164 - 31408223
Alignment:
Q  56 ggtcaaaaactaactttcccatggtgggaaaaaattagctttcccttgctaaacctcacc 115  Q
    |||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||    
T  31408164 ggtcaaaaactaactttcccatggtgggaaaaaagtagctttcccatgctaaacctcacc 31408223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 16 - 72
Target Start/End: Original strand, 41715216 - 41715272
Alignment:
Q  16 gatgaagtatgataaggatgtgttcttggtttgatttaatggtcaaaaactaacttt 72  Q
    |||| |||||||||||||| ||||||||||||||| |||||||||||||||||||||    
T  41715216 gatggagtatgataaggatatgttcttggtttgatctaatggtcaaaaactaacttt 41715272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 49 - 93
Target Start/End: Complemental strand, 42573646 - 42573602
Alignment:
Q  49 atttaatggtcaaaaactaactttcccatggtgggaaaaaattag 93  Q
    |||||||||||||||||||| |||| |||||||||||||||||||    
T  42573646 atttaatggtcaaaaactaattttctcatggtgggaaaaaattag 42573602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 21 - 72
Target Start/End: Original strand, 37658498 - 37658549
Alignment:
Q  21 agtatgataaggatgtgttcttggtttgatttaatggtcaaaaactaacttt 72  Q
    |||||| |||||| |||||||| ||||||| ||||||| |||||||||||||    
T  37658498 agtatggtaaggacgtgttcttcgtttgatctaatggtaaaaaactaacttt 37658549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 52 - 89
Target Start/End: Original strand, 35759223 - 35759260
Alignment:
Q  52 taatggtcaaaaactaactttcccatggtgggaaaaaa 89  Q
    ||||||| |||||||||||||||||||||||| |||||    
T  35759223 taatggttaaaaactaactttcccatggtggggaaaaa 35759260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 52 - 89
Target Start/End: Complemental strand, 41348208 - 41348171
Alignment:
Q  52 taatggtcaaaaactaactttcccatggtgggaaaaaa 89  Q
    ||||||| |||||||||||||||||||||||| |||||    
T  41348208 taatggttaaaaactaactttcccatggtggggaaaaa 41348171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 53 - 89
Target Start/End: Complemental strand, 41092235 - 41092199
Alignment:
Q  53 aatggtcaaaaactaactttcccatggtgggaaaaaa 89  Q
    |||||| ||||||||||||| ||||||||||||||||    
T  41092235 aatggttaaaaactaacttttccatggtgggaaaaaa 41092199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 75; Significance: 2e-34; HSPs: 16)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 21 - 115
Target Start/End: Original strand, 5620823 - 5620917
Alignment:
Q  21 agtatgataaggatgtgttcttggtttgatttaatggtcaaaaactaactttcccatggtgggaaaaaattagctttcccttgctaaacctcacc 115  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||| || ||||||| ||||||||||||||    
T  5620823 agtatgataaggatgtgttcttggtttgatctaatggtcaaaaactaattttcccatggtgggaaaaaagtaactttcccatgctaaacctcacc 5620917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 19 - 118
Target Start/End: Original strand, 42655692 - 42655791
Alignment:
Q  19 gaagtatgataaggatgtgttcttggtttgatttaatggtcaaaaactaactttcccatggtgggaaaaaattagctttcccttgctaaacctcacctat 118  Q
    ||||||||||||||||||||| |||||||||| ||||||||||||||||| ||| ||||||||||||| || |||||||||| |||||||| | ||||||    
T  42655692 gaagtatgataaggatgtgttattggtttgatctaatggtcaaaaactaatttttccatggtgggaaagaagtagctttcccatgctaaacgtgacctat 42655791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 21 - 117
Target Start/End: Original strand, 12330616 - 12330712
Alignment:
Q  21 agtatgataaggatgtgttcttggtttgatttaatggtcaaaaactaactttcccatggtgggaaaaaattag-ctttcccttgctaaacctcaccta 117  Q
    |||||| ||||||||||||||||||||||| ||||||| |||||||||||||||||||||||| ||||||||| ||||||| |||||||| |||||||    
T  12330616 agtatggtaaggatgtgttcttggtttgatctaatggttaaaaactaactttcccatggtggg-aaaaattagcctttcccatgctaaacttcaccta 12330712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 21 - 116
Target Start/End: Complemental strand, 3595871 - 3595776
Alignment:
Q  21 agtatgataaggatgtgttcttggtttgatttaatggtcaaaaactaactttcccatggtgggaaaaaattag-ctttcccttgctaaacctcacct 116  Q
    |||||| ||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||| |||||||| ||||||| |||||||| ||||||    
T  3595871 agtatggtaaggatgtgttcttggtttgatctaatggttaaaaactaactttcccatggtggga-aaaattagcctttcccatgctaaacttcacct 3595776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 21 - 116
Target Start/End: Complemental strand, 7858421 - 7858326
Alignment:
Q  21 agtatgataaggatgtgttcttggtttgatttaatggtcaaaaactaactttcccatggtgggaaaaaattag-ctttcccttgctaaacctcacct 116  Q
    |||||| ||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||| |||||||| ||||||| |||||||| ||||||    
T  7858421 agtatggtaaggatgtgttcttggtttgatctaatggttaaaaactaactttcccatggtggga-aaaattagcctttcccatgctaaacttcacct 7858326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 21 - 115
Target Start/End: Original strand, 8321341 - 8321435
Alignment:
Q  21 agtatgataaggatgtgttcttggtttgatttaatggtcaaaaactaactttcccatggtgggaaaaaattag-ctttcccttgctaaacctcacc 115  Q
    |||||| ||||||||||||||||||||||| ||||||| |||||||||||||||||||||||| ||||||||| ||||||| |||||||| |||||    
T  8321341 agtatggtaaggatgtgttcttggtttgatctaatggttaaaaactaactttcccatggtggg-aaaaattagcctttcccatgctaaacttcacc 8321435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 21 - 115
Target Start/End: Complemental strand, 12330242 - 12330148
Alignment:
Q  21 agtatgataaggatgtgttcttggtttgatttaatggtcaaaaactaactttcccatggtgggaaaaaattag-ctttcccttgctaaacctcacc 115  Q
    |||||| ||||||||||||||||||||||| ||||||| ||||| ||||||||||||||||||| |||||||| ||||||| |||||||| |||||    
T  12330242 agtatggtaaggatgtgttcttggtttgatctaatggttaaaaattaactttcccatggtggga-aaaattagcctttcccatgctaaacttcacc 12330148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 21 - 96
Target Start/End: Original strand, 16996983 - 16997058
Alignment:
Q  21 agtatgataaggatgtgttcttggtttgatttaatggtcaaaaactaactttcccatggtgggaaaaaattagctt 96  Q
    |||||| ||||||||||||||| ||||||| ||||||||||||||||||||||||||||| |||||||| ||||||    
T  16996983 agtatggtaaggatgtgttcttcgtttgatctaatggtcaaaaactaactttcccatggtaggaaaaaagtagctt 16997058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 21 - 115
Target Start/End: Complemental strand, 29759691 - 29759597
Alignment:
Q  21 agtatgataaggatgtgttcttggtttgatttaatggtcaaaaactaactttcccatggtgggaaaaaattag-ctttcccttgctaaacctcacc 115  Q
    |||||| ||||||||||||||||||||||| ||||||| |||||||||||||||||| || |||||||||||| ||||||| |||||||| |||||    
T  29759691 agtatggtaaggatgtgttcttggtttgatctaatggttaaaaactaactttcccatagt-ggaaaaaattagtctttcccatgctaaacttcacc 29759597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 28 - 114
Target Start/End: Original strand, 3596254 - 3596340
Alignment:
Q  28 taaggatgtgttcttggtttgatttaatggtcaaaaactaactttcccatggtgggaaaaaattag-ctttcccttgctaaacctcac 114  Q
    ||||||||||||||||||||||| ||||||| ||||||||| |||||||||||||| ||||||||| ||||||| |||||||| ||||    
T  3596254 taaggatgtgttcttggtttgatctaatggttaaaaactaattttcccatggtggg-aaaaattagtctttcccatgctaaacttcac 3596340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 21 - 115
Target Start/End: Complemental strand, 8320969 - 8320875
Alignment:
Q  21 agtatgataaggatgtgttcttggtttgatttaatggtcaaaaactaactttcccatggtgggaaaaaattag-ctttcccttgctaaacctcacc 115  Q
    |||||| |||||||||||| ||||||| || ||||||| ||||||||||||||||||||||||| |||||||| ||||||| |||||||| |||||    
T  8320969 agtatggtaaggatgtgttattggtttaatctaatggttaaaaactaactttcccatggtggga-aaaattagcctttcccatgctaaacttcacc 8320875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 21 - 115
Target Start/End: Complemental strand, 24027281 - 24027187
Alignment:
Q  21 agtatgataaggatgtgttcttggtttgatttaatggtcaaaaactaactttcccatggtgggaaaaaattag-ctttcccttgctaaacctcacc 115  Q
    |||||| ||||||||||||||||||||||| |||| || ||||||||||||| ||||||||||| |||||||| ||||||| |||||||| |||||    
T  24027281 agtatggtaaggatgtgttcttggtttgatctaatagttaaaaactaacttttccatggtggga-aaaattagcctttcccatgctaaacttcacc 24027187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 21 - 88
Target Start/End: Original strand, 24027640 - 24027707
Alignment:
Q  21 agtatgataaggatgtgttcttggtttgatttaatggtcaaaaactaactttcccatggtgggaaaaa 88  Q
    |||||| ||||||||||||||||||||||| ||||||| ||||||||||||||||||| |||||||||    
T  24027640 agtatggtaaggatgtgttcttggtttgatctaatggttaaaaactaactttcccatgatgggaaaaa 24027707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 21 - 117
Target Start/End: Original strand, 7858773 - 7858869
Alignment:
Q  21 agtatgataaggatgtgttcttggtttgatttaatggtcaaaaactaactttcccatggtgggaaaaaattagctttcccttgctaaacctcaccta 117  Q
    |||||| ||||||||| ||||||||||||||||||||| |||||||||||||||||||||   ||||| | | ||||||| || ||||| |||||||    
T  7858773 agtatggtaaggatgtattcttggtttgatttaatggttaaaaactaactttcccatggtaaaaaaaattaatctttcccatgttaaacttcaccta 7858869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 51 - 116
Target Start/End: Complemental strand, 31078520 - 31078455
Alignment:
Q  51 ttaatggtcaaaaactaactttcccatggtgggaaaaaattag-ctttcccttgctaaacctcacct 116  Q
    |||||||| ||||||||||||||||||||| |||||||||||| ||||||| |||||||| ||||||    
T  31078520 ttaatggttaaaaactaactttcccatggt-ggaaaaaattagtctttcccatgctaaacttcacct 31078455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 58 - 116
Target Start/End: Complemental strand, 36912302 - 36912245
Alignment:
Q  58 tcaaaaactaactttcccatggtgggaaaaaattagctttcccttgctaaacctcacct 116  Q
    |||||||| ||||||||||||||||||||||||   ||||||| ||||||||| |||||    
T  36912302 tcaaaaac-aactttcccatggtgggaaaaaatagcctttcccatgctaaaccccacct 36912245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 75; Significance: 2e-34; HSPs: 21)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 21 - 115
Target Start/End: Complemental strand, 19860424 - 19860330
Alignment:
Q  21 agtatgataaggatgtgttcttggtttgatttaatggtcaaaaactaactttcccatggtgggaaaaaattagctttcccttgctaaacctcacc 115  Q
    |||||| |||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||    
T  19860424 agtatggtaagtatgtgttcttggtttgatctaatggtcaaaaactaactttcccatggtgggaaaaaaatagctttcccatgctaaacctcacc 19860330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 21 - 116
Target Start/End: Original strand, 19860826 - 19860921
Alignment:
Q  21 agtatgataaggatgtgttcttggtttgatttaatggtcaaaaactaactttcccatggtgggaaaaaattagctttcccttgctaaacctcacct 116  Q
    ||||||| |||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||| ||| |||||| |||||||||||||||    
T  19860826 agtatgaaaaggatgtgttcttggtttgatctaatggtcaaaaactaactttcccacggtgggaaaaaagtaggtttcccatgctaaacctcacct 19860921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 21 - 116
Target Start/End: Complemental strand, 5235468 - 5235373
Alignment:
Q  21 agtatgataaggatgtgttcttggtttgatttaatggtcaaaaactaactttcccatggtgggaaaaaattag-ctttcccttgctaaacctcacct 116  Q
    |||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||| |||||||| ||||||| |||||||| ||||||    
T  5235468 agtatgataaggatgtgttcttggtttgatctaatggttaaaaactaactttcccatggtggga-aaaattagcctttcccatgctaaacttcacct 5235373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 21 - 116
Target Start/End: Complemental strand, 20175064 - 20174969
Alignment:
Q  21 agtatgataaggatgtgttcttggtttgatttaatggtcaaaaactaactttcccatggtgggaaaaaattag-ctttcccttgctaaacctcacct 116  Q
    |||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||| |||||||| ||||||| |||||||| ||||||    
T  20175064 agtatgataaggatgtgttcttggtttgatctaatggttaaaaactaactttcccatggtggga-aaaattagcctttcccatgctaaacttcacct 20174969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 21 - 116
Target Start/End: Original strand, 6934456 - 6934551
Alignment:
Q  21 agtatgataaggatgtgttcttggtttgatttaatggtcaaaaactaactttcccatggtgggaaaaaattag-ctttcccttgctaaacctcacct 116  Q
    |||||| ||||||||||||||||||||||| ||||||| ||||||||||||||||||||| |||||||||||| ||||||| |||||||| ||||||    
T  6934456 agtatggtaaggatgtgttcttggtttgatctaatggttaaaaactaactttcccatggt-ggaaaaaattagtctttcccatgctaaacttcacct 6934551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 29 - 116
Target Start/End: Original strand, 52532392 - 52532479
Alignment:
Q  29 aaggatgtgttcttggtttgatttaatggtcaaaaactaactttcccatggtgggaaaaaattagctttcccttgctaaacctcacct 116  Q
    |||||||||||||||||||||| || |||||||||||||||||||| | |||||||||||| ||||||| || || ||||||||||||    
T  52532392 aaggatgtgttcttggtttgatctactggtcaaaaactaactttccaacggtgggaaaaaagtagcttttccatgttaaacctcacct 52532479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 21 - 116
Target Start/End: Complemental strand, 6933915 - 6933820
Alignment:
Q  21 agtatgataaggatgtgttcttggtttgatttaatggtcaaaaactaactttcccatggtgggaaaaaattag-ctttcccttgctaaacctcacct 116  Q
    |||||| ||||||||||||||||||||||| ||||||| ||||||||||||| ||||| | |||||||||||| ||||||| |||||||| ||||||    
T  6933915 agtatggtaaggatgtgttcttggtttgatctaatggttaaaaactaacttttccatgat-ggaaaaaattagtctttcccatgctaaacttcacct 6933820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 21 - 113
Target Start/End: Complemental strand, 52532217 - 52532125
Alignment:
Q  21 agtatgataaggatgtgttcttggtttgatttaatggtcaaaaactaactttcccatggtgggaaaaaattagctttcccttgctaaacctca 113  Q
    ||||| |||| |||| |||||||||||||| |  ||||||||||| ||||||||||||||||||||||| ||| |||||| ||||||||||||    
T  52532217 agtataataaagatgcgttcttggtttgatctgctggtcaaaaacaaactttcccatggtgggaaaaaagtagttttcccatgctaaacctca 52532125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 21 - 116
Target Start/End: Original strand, 5259282 - 5259377
Alignment:
Q  21 agtatgataaggatgtgttcttggtttgatttaatggtcaaaaactaactttcccatggtgggaaaaaattagctttcccttgctaaacctcacct 116  Q
    |||||||||| |||||||||||| |||||| |||||||| |||||||||||||||||| ||  |||||| ||| |||| | |||||||||||||||    
T  5259282 agtatgataaagatgtgttcttgatttgatctaatggtcgaaaactaactttcccatgatgaaaaaaaagtagttttctcatgctaaacctcacct 5259377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 21 - 116
Target Start/End: Original strand, 5235840 - 5235935
Alignment:
Q  21 agtatgataaggatgtgttcttggtttgatttaatggtcaaaaactaactttcccatggtgggaaaaaattag-ctttcccttgctaaacctcacct 116  Q
    |||||| ||||||||||||||||||||||| ||||||| ||||||||||||||| ||||| || |||||||||  |||||| |||||||| ||||||    
T  5235840 agtatggtaaggatgtgttcttggtttgatctaatggttaaaaactaactttcctatggtagg-aaaaattagtttttcccatgctaaacttcacct 5235935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 21 - 118
Target Start/End: Original strand, 30213869 - 30213966
Alignment:
Q  21 agtatgataaggatgtgttcttggtttgatttaatggtcaaaaactaactttcccatggtgggaaaaaattagctttcccttgctaaacctcacctat 118  Q
    ||||||||||  || | ||||||||||||| |||||||||||||||||||||  |||||| | |||||| ||| |||||| || ||||||||||||||    
T  30213869 agtatgataaaaatatattcttggtttgatctaatggtcaaaaactaactttttcatggtagaaaaaaagtagttttcccatgataaacctcacctat 30213966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 49 - 89
Target Start/End: Complemental strand, 46764319 - 46764279
Alignment:
Q  49 atttaatggtcaaaaactaactttcccatggtgggaaaaaa 89  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  46764319 atttaatggtcaaaaactaactttcccatggtgggaaaaaa 46764279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 52 - 89
Target Start/End: Complemental strand, 11680340 - 11680303
Alignment:
Q  52 taatggtcaaaaactaactttcccatggtgggaaaaaa 89  Q
    ||||||||||||||||||||||||||||||||||||||    
T  11680340 taatggtcaaaaactaactttcccatggtgggaaaaaa 11680303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 52 - 89
Target Start/End: Complemental strand, 11688619 - 11688582
Alignment:
Q  52 taatggtcaaaaactaactttcccatggtgggaaaaaa 89  Q
    ||||||||||||||||||||||||||||||||||||||    
T  11688619 taatggtcaaaaactaactttcccatggtgggaaaaaa 11688582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 52 - 89
Target Start/End: Original strand, 25655623 - 25655660
Alignment:
Q  52 taatggtcaaaaactaactttcccatggtgggaaaaaa 89  Q
    ||||||||||||||||||||||||||||||||||||||    
T  25655623 taatggtcaaaaactaactttcccatggtgggaaaaaa 25655660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 49 - 89
Target Start/End: Complemental strand, 31910621 - 31910581
Alignment:
Q  49 atttaatggtcaaaaactaactttcccatggtgggaaaaaa 89  Q
    |||||||||| ||||||||||||||||||||||||||||||    
T  31910621 atttaatggttaaaaactaactttcccatggtgggaaaaaa 31910581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 52 - 94
Target Start/End: Original strand, 12590187 - 12590229
Alignment:
Q  52 taatggtcaaaaactaactttcccatggtgggaaaaaattagc 94  Q
    ||||||||||||||||||||||||||||||| |||||| ||||    
T  12590187 taatggtcaaaaactaactttcccatggtggaaaaaaactagc 12590229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 53 - 115
Target Start/End: Original strand, 3167463 - 3167525
Alignment:
Q  53 aatggtcaaaaactaactttcccatggtgggaaaaaattagctttcccttgctaaacctcacc 115  Q
    |||||| |||||  |||||||||||||||||||||| | | ||||||| ||||||||| ||||    
T  3167463 aatggttaaaaaacaactttcccatggtgggaaaaagtaatctttcccatgctaaaccccacc 3167525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 53 - 109
Target Start/End: Complemental strand, 39412827 - 39412771
Alignment:
Q  53 aatggtcaaaaactaactttcccatggtgggaaaaaattag-ctttcccttgctaaac 109  Q
    |||||| ||||||||||||||||||| |||| ||||||||| ||||||| ||||||||    
T  39412827 aatggttaaaaactaactttcccatgatggg-aaaaattagcctttcccatgctaaac 39412771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 45 - 89
Target Start/End: Complemental strand, 3847957 - 3847913
Alignment:
Q  45 tttgatttaatggtcaaaaactaactttcccatggtgggaaaaaa 89  Q
    |||||| |||||||||||||   ||||||||||||||||||||||    
T  3847957 tttgatctaatggtcaaaaaaatactttcccatggtgggaaaaaa 3847913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 53 - 116
Target Start/End: Original strand, 39413607 - 39413670
Alignment:
Q  53 aatggtcaaaaactaactttcccatggtgggaaaaaattag-ctttcccttgctaaacctcacct 116  Q
    |||||| ||||||||||||||| |||||||| ||||||||| ||||||| | |||||| ||||||    
T  39413607 aatggttaaaaactaactttcctatggtggg-aaaaattagtctttcccattctaaacttcacct 39413670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 75; Significance: 2e-34; HSPs: 18)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 21 - 115
Target Start/End: Complemental strand, 3705431 - 3705337
Alignment:
Q  21 agtatgataaggatgtgttcttggtttgatttaatggtcaaaaactaactttcccatggtgggaaaaaattagctttcccttgctaaacctcacc 115  Q
    ||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||  ||||||||||||||    
T  3705431 agtatgatatggatgtgttcttggtttgatctaatggtcaaaaactaactttcccatggtgggaaaaaagtagctttcctatgctaaacctcacc 3705337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 21 - 115
Target Start/End: Complemental strand, 16681660 - 16681566
Alignment:
Q  21 agtatgataaggatgtgttcttggtttgatttaatggtcaaaaactaactttcccatggtgggaaaaaattagctttcccttgctaaacctcacc 115  Q
    |||||||||||||||||||||||||||||| |||||| |||||||||||||||||||| ||||||| || |||||||||| ||||||||||||||    
T  16681660 agtatgataaggatgtgttcttggtttgatctaatggccaaaaactaactttcccatgatgggaaataactagctttcccatgctaaacctcacc 16681566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 21 - 117
Target Start/End: Original strand, 3705778 - 3705876
Alignment:
Q  21 agtatgataaggatgtgttcttggtttgatttaatggtcaaaaactaactttcccatggtgg--gaaaaaattagctttcccttgctaaacctcaccta 117  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||   |||||| |||  ||||| ||||||||||||||||    
T  3705778 agtatgataaggatgtgttcttggtttgatctaatggtcaaaaactaactttcccatggtggaaaaaaaaagtagtcttcccatgctaaacctcaccta 3705876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 21 - 115
Target Start/End: Original strand, 7994527 - 7994621
Alignment:
Q  21 agtatgataaggatgtgttcttggtttgatttaatggtcaaaaactaactttcccatggtgggaaaaaattag-ctttcccttgctaaacctcacc 115  Q
    |||||| ||||||||||||||||||||||| ||||||| ||||||||||||||||||||| |||||||||||| ||||||| |||||||| |||||    
T  7994527 agtatggtaaggatgtgttcttggtttgatctaatggttaaaaactaactttcccatggt-ggaaaaaattagcctttcccatgctaaacttcacc 7994621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 21 - 115
Target Start/End: Complemental strand, 30899484 - 30899390
Alignment:
Q  21 agtatgataaggatgtgttcttggtttgatttaatggtcaaaaactaactttcccatggtgggaaaaaattag-ctttcccttgctaaacctcacc 115  Q
    |||||| ||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||| |||||||| ||||||| |||||||| |||||    
T  30899484 agtatggtaaggatgtgttcttggtttgatctaatggttaaaaactaactttcccatggtggga-aaaattagcctttcccatgctaaacttcacc 30899390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 21 - 116
Target Start/End: Original strand, 15561994 - 15562089
Alignment:
Q  21 agtatgataaggatgtgttcttggtttgatttaatggtcaaaaactaactttcccatggtgggaaaaaattag-ctttcccttgctaaacctcacct 116  Q
    |||||| |||||||||||||||||||| || ||||||| |||||||||||||||||||||||| ||||||||| ||||||| |||||||| ||||||    
T  15561994 agtatggtaaggatgtgttcttggtttaatctaatggttaaaaactaactttcccatggtggg-aaaaattagcctttcccatgctaaacttcacct 15562089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 21 - 116
Target Start/End: Original strand, 16903851 - 16903946
Alignment:
Q  21 agtatgataaggatgtgttcttggtttgatttaatggtcaaaaactaactttcccatggtgggaaaaaattag-ctttcccttgctaaacctcacct 116  Q
    |||||| ||||||||||||||| ||||||| ||||||| |||||||||||||||||||||||| ||||||||| ||||||| |||||||| ||||||    
T  16903851 agtatggtaaggatgtgttcttagtttgatctaatggttaaaaactaactttcccatggtggg-aaaaattagcctttcccatgctaaacttcacct 16903946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 21 - 116
Target Start/End: Original strand, 16992345 - 16992441
Alignment:
Q  21 agtatgataaggatgtgttcttggtttgatttaatggtcaaaaactaactttcccatggtgggaaaaaattag-ctttcccttgctaaacctcacct 116  Q
    |||||| ||||||||||||||| ||||||| ||||||| |||||||||||||||||||||| | ||||||||| ||||||| |||||||| ||||||    
T  16992345 agtatggtaaggatgtgttcttagtttgatctaatggttaaaaactaactttcccatggtgaggaaaaattagcctttcccatgctaaacttcacct 16992441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 21 - 116
Target Start/End: Original strand, 37996537 - 37996632
Alignment:
Q  21 agtatgataaggatgtgttcttggtttgatttaatggtcaaaaactaactttcccatggtgggaaaaaattag-ctttcccttgctaaacctcacct 116  Q
    ||||||||||||||||||||||| |||||| ||||||| ||||||||||||||||||| |||| ||||||||| ||||||| |||||||| ||||||    
T  37996537 agtatgataaggatgtgttcttgatttgatctaatggttaaaaactaactttcccatgatggg-aaaaattagcctttcccatgctaaacttcacct 37996632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 21 - 115
Target Start/End: Original strand, 6609997 - 6610091
Alignment:
Q  21 agtatgataaggatgtgttcttggtttgatttaatggtcaaaaactaactttcccatggtgggaaaaaattag-ctttcccttgctaaacctcacc 115  Q
    |||||| |||||||||||||||||||| || ||||||| |||||||||||||||||||||||| ||||||||| ||||||| |||||||| |||||    
T  6609997 agtatggtaaggatgtgttcttggtttaatctaatggttaaaaactaactttcccatggtggg-aaaaattagcctttcccatgctaaacttcacc 6610091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 21 - 116
Target Start/End: Complemental strand, 15561635 - 15561540
Alignment:
Q  21 agtatgataaggatgtgttcttggtttgatttaatggtcaaaaactaactttcccatggtgggaaaaaattag-ctttcccttgctaaacctcacct 116  Q
    |||||| ||||||||||||||| ||||||| ||||||| ||||||||||||||| ||||||||| |||||||| ||||||| |||||||| ||||||    
T  15561635 agtatggtaaggatgtgttcttagtttgatctaatggttaaaaactaactttccaatggtggga-aaaattagtctttcccatgctaaacttcacct 15561540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 21 - 88
Target Start/End: Complemental strand, 7994149 - 7994082
Alignment:
Q  21 agtatgataaggatgtgttcttggtttgatttaatggtcaaaaactaactttcccatggtgggaaaaa 88  Q
    |||||| ||||||||||||||||||||||| ||||||| ||||||||||||||||||| |||||||||    
T  7994149 agtatggtaaggatgtgttcttggtttgatctaatggttaaaaactaactttcccatgatgggaaaaa 7994082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 21 - 115
Target Start/End: Original strand, 30899855 - 30899949
Alignment:
Q  21 agtatgataaggatgtgttcttggtttgatttaatggtcaaaaactaactttcccatggtgggaaaaaattag-ctttcccttgctaaacctcacc 115  Q
    |||||| ||||||||||||||||||||||| |||| || |||||||||||||  ||||||||| ||||||||| ||||||| |||||||| |||||    
T  30899855 agtatggtaaggatgtgttcttggtttgatctaatagttaaaaactaactttttcatggtggg-aaaaattagcctttcccatgctaaacttcacc 30899949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 21 - 114
Target Start/End: Complemental strand, 6609645 - 6609552
Alignment:
Q  21 agtatgataaggatgtgttcttggtttgatttaatggtcaaaaactaactttcccatggtgggaaaaaattag-ctttcccttgctaaacctcac 114  Q
    |||||| |||||||||||| ||||||| || ||||||| ||||||||||||| ||||||||||| |||||||| ||||||| |||||||| ||||    
T  6609645 agtatggtaaggatgtgttgttggtttcatctaatggttaaaaactaacttttccatggtggga-aaaattagcctttcccatgctaaacttcac 6609552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 21 - 88
Target Start/End: Complemental strand, 16903491 - 16903425
Alignment:
Q  21 agtatgataaggatgtgttcttggtttgatttaatggtcaaaaactaactttcccatggtgggaaaaa 88  Q
    |||||| |||||||||||||||| |||||| ||||||| ||||||||||||| |||||||||||||||    
T  16903491 agtatggtaaggatgtgttcttg-tttgatctaatggttaaaaactaacttttccatggtgggaaaaa 16903425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 32 - 89
Target Start/End: Original strand, 16682231 - 16682288
Alignment:
Q  32 gatgtgttcttggtttgatttaatggtcaaaaactaactttcccatggtgggaaaaaa 89  Q
    ||||||||||| |||||||||||| |||||||||||||||| |||  |||||||||||    
T  16682231 gatgtgttcttcgtttgatttaatagtcaaaaactaactttgccaatgtgggaaaaaa 16682288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 52 - 116
Target Start/End: Complemental strand, 34617716 - 34617652
Alignment:
Q  52 taatggtcaaaaactaactttcccatggtgggaaaaaatta-gctttcccttgctaaacctcacct 116  Q
    ||||||||||||| ||||||||||||||||||||| |||||  ||||||| ||||||||| |||||    
T  34617716 taatggtcaaaaa-taactttcccatggtgggaaacaattatcctttcccatgctaaaccccacct 34617652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 53 - 89
Target Start/End: Complemental strand, 40992285 - 40992249
Alignment:
Q  53 aatggtcaaaaactaactttcccatggtgggaaaaaa 89  Q
    |||||| ||||||||||||||||||||| ||||||||    
T  40992285 aatggttaaaaactaactttcccatggtaggaaaaaa 40992249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0508 (Bit Score: 63; Significance: 3e-27; HSPs: 2)
Name: scaffold0508
Description:

Target: scaffold0508; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 21 - 118
Target Start/End: Complemental strand, 4227 - 4130
Alignment:
Q  21 agtatgataaggatgtgttcttggtttgatttaatggtcaaaaactaactttcccatggtgggaaaaaattag-ctttcccttgctaaacctcacctat 118  Q
    |||||| ||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||| |||||||| ||||||| |||||||| ||||||||    
T  4227 agtatggtaaggatgtgttcttggtttgatctaatggttaaaaactaactttcccatggtggga-aaaattagcctttcccatgctaaacttcacctat 4130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0508; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 21 - 115
Target Start/End: Original strand, 4578 - 4672
Alignment:
Q  21 agtatgataaggatgtgttcttggtttgatttaatggtcaaaaactaactttcccatggtgggaaaaaattag-ctttcccttgctaaacctcacc 115  Q
    |||||| ||||||||||||||||||||||| |||| || ||||||||||||||||||| | |||||||||||| ||||||| |||||||| |||||    
T  4578 agtatggtaaggatgtgttcttggtttgatctaattgttaaaaactaactttcccatgat-ggaaaaaattagtctttcccatgctaaacttcacc 4672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 61; Significance: 5e-26; HSPs: 2)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 21 - 116
Target Start/End: Complemental strand, 61668 - 61573
Alignment:
Q  21 agtatgataaggatgtgttcttggtttgatttaatggtcaaaaactaactttcccatggtgggaaaaaattag-ctttcccttgctaaacctcacct 116  Q
    ||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||| |||| ||||||||| ||||||| |||||||| ||||||    
T  61668 agtatgagaaggatgtgttcttggtttgatctaatggtcaaaaactaactttcccatgatggg-aaaaattagcctttcccatgctaaacttcacct 61573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 21 - 69
Target Start/End: Original strand, 62041 - 62089
Alignment:
Q  21 agtatgataaggatgtgttcttggtttgatttaatggtcaaaaactaac 69  Q
    |||||| |||||||||| |||||||||||| ||||| | ||||||||||    
T  62041 agtatggtaaggatgtgatcttggtttgatctaatgctaaaaaactaac 62089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 56; Significance: 5e-23; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 21 - 88
Target Start/End: Original strand, 202237 - 202304
Alignment:
Q  21 agtatgataaggatgtgttcttggtttgatttaatggtcaaaaactaactttcccatggtgggaaaaa 88  Q
    |||||| ||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||    
T  202237 agtatggtaaggatgtgttcttggtttgatttaatggttaaaaactaacttttccatggtgggaaaaa 202304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0095 (Bit Score: 53; Significance: 3e-21; HSPs: 1)
Name: scaffold0095
Description:

Target: scaffold0095; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 21 - 113
Target Start/End: Original strand, 42886 - 42977
Alignment:
Q  21 agtatgataaggatgtgttcttggtttgatttaatggtcaaaaactaactttcccatggtgggaaaaaattagctttcccttgctaaacctca 113  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||   ||||| |||||||| ||| |||| | ||||||||||||    
T  42886 agtattataaggatgtgttcttggtttgatttaatggtcaaaaactaacttttttatggt-ggaaaaaagtagttttctcatgctaaacctca 42977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 44 - 118
Target Start/End: Original strand, 22203 - 22278
Alignment:
Q  44 gtttgatttaatggtcaaaaactaactttcccatggtgg-gaaaaaattagctttcccttgctaaacctcacctat 118  Q
    ||||||| |||||||||||||| || |||||||||||||  |||||| |||||||||| ||||||||  |||||||    
T  22203 gtttgatctaatggtcaaaaacaaattttcccatggtggaaaaaaaagtagctttcccatgctaaacgccacctat 22278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0155 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 53 - 89
Target Start/End: Complemental strand, 17402 - 17366
Alignment:
Q  53 aatggtcaaaaactaactttcccatggtgggaaaaaa 89  Q
    |||||| ||||||||||||||||||||||||||||||    
T  17402 aatggttaaaaactaactttcccatggtgggaaaaaa 17366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University