View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19271_low_56 (Length: 235)
Name: NF19271_low_56
Description: NF19271
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19271_low_56 |
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Alignment Details
Target: chr7 (Bit Score: 178; Significance: 4e-96; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 178; E-Value: 4e-96
Query Start/End: Original strand, 13 - 218
Target Start/End: Original strand, 22272753 - 22272958
Alignment:
| Q |
13 |
gagaagaaagctgcaaatgtctagcaagtgttgatattaactatttgactaaattcagatggtcaaatgtttgttggtaggattttgctacatgaagtat |
112 |
Q |
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| T |
22272753 |
gagaagaaagctgcaaatgtctagcaagtgttgatattaactatttgactgaattcagattgtcaaatgtttgttgctaggattttgctacatgtaatat |
22272852 |
T |
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| Q |
113 |
attgctagtagatattgattagggaatgatatgctttgaatccatgagtagatataatggcattgcaccaactataacgaattttgtccatagacatgat |
212 |
Q |
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||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
22272853 |
attgctagtagatattgattagggaatgatatgctttgaatacataagtagatataatggcattgcaccaactataacgaattttgtccatagacatgat |
22272952 |
T |
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| Q |
213 |
aagtat |
218 |
Q |
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|||||| |
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| T |
22272953 |
aagtat |
22272958 |
T |
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