View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19273_high_7 (Length: 315)

Name: NF19273_high_7
Description: NF19273
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19273_high_7
NF19273_high_7
[»] chr3 (15 HSPs)
chr3 (59-301)||(49086599-49086840)
chr3 (59-301)||(49356658-49356898)
chr3 (59-183)||(33795023-33795147)
chr3 (70-122)||(46572503-46572555)
chr3 (70-123)||(15493324-15493377)
chr3 (72-110)||(26549830-26549868)
chr3 (70-107)||(49406895-49406932)
chr3 (70-139)||(53722968-53723037)
chr3 (70-106)||(47700499-47700535)
chr3 (72-122)||(7520699-7520749)
chr3 (70-170)||(55027233-55027332)
chr3 (70-138)||(7008586-7008654)
chr3 (70-122)||(26162089-26162141)
chr3 (70-122)||(35471868-35471920)
chr3 (70-122)||(51974718-51974770)
[»] chr7 (11 HSPs)
chr7 (59-301)||(33379745-33379986)
chr7 (70-139)||(38352084-38352153)
chr7 (70-107)||(38970516-38970553)
chr7 (70-107)||(43201498-43201535)
chr7 (71-120)||(48985362-48985411)
chr7 (70-110)||(20354727-20354767)
chr7 (70-122)||(26815598-26815650)
chr7 (70-122)||(32749417-32749469)
chr7 (70-122)||(37889341-37889393)
chr7 (70-122)||(37952251-37952303)
chr7 (70-122)||(40690803-40690855)
[»] chr4 (11 HSPs)
chr4 (64-301)||(36658906-36659146)
chr4 (70-150)||(39048584-39048664)
chr4 (71-120)||(31848345-31848394)
chr4 (70-219)||(56054718-56054866)
chr4 (70-111)||(39113334-39113375)
chr4 (70-139)||(39532715-39532784)
chr4 (74-122)||(55501-55549)
chr4 (70-122)||(16171445-16171497)
chr4 (70-138)||(31336069-31336137)
chr4 (70-138)||(48506127-48506195)
chr4 (70-110)||(53347255-53347295)
[»] chr8 (14 HSPs)
chr8 (59-301)||(26414668-26414909)
chr8 (59-301)||(5736482-5736723)
chr8 (59-301)||(34954701-34954942)
chr8 (70-143)||(17494102-17494174)
chr8 (70-139)||(231831-231900)
chr8 (70-139)||(708242-708311)
chr8 (70-139)||(745454-745523)
chr8 (70-139)||(869349-869418)
chr8 (70-126)||(35932332-35932388)
chr8 (71-120)||(13817520-13817569)
chr8 (70-139)||(23550218-23550287)
chr8 (70-107)||(31129017-31129054)
chr8 (71-120)||(42861175-42861224)
chr8 (70-122)||(29732157-29732209)
[»] chr1 (14 HSPs)
chr1 (59-301)||(44450629-44450870)
chr1 (59-301)||(44651539-44651780)
chr1 (59-139)||(8465030-8465110)
chr1 (70-122)||(3754597-3754649)
chr1 (70-139)||(39149608-39149676)
chr1 (71-120)||(643395-643444)
chr1 (70-139)||(36303568-36303637)
chr1 (70-139)||(48729906-48729975)
chr1 (73-106)||(20584379-20584412)
chr1 (70-107)||(36231392-36231429)
chr1 (70-107)||(45363949-45363986)
chr1 (70-110)||(8471684-8471724)
chr1 (70-138)||(10265503-10265571)
chr1 (70-110)||(43739499-43739539)
[»] chr2 (11 HSPs)
chr2 (74-191)||(2778630-2778747)
chr2 (59-301)||(16333769-16334010)
chr2 (59-301)||(16125615-16125856)
chr2 (214-295)||(2778552-2778632)
chr2 (70-107)||(13151175-13151212)
chr2 (70-107)||(14151823-14151860)
chr2 (70-170)||(9118296-9118395)
chr2 (70-110)||(1308241-1308281)
chr2 (70-110)||(7762750-7762790)
chr2 (70-110)||(17486269-17486309)
chr2 (70-110)||(39490600-39490640)
[»] chr5 (17 HSPs)
chr5 (72-122)||(37882044-37882094)
chr5 (70-111)||(34528970-34529011)
chr5 (70-122)||(8680866-8680918)
chr5 (70-110)||(14279297-14279337)
chr5 (61-106)||(25653282-25653328)
chr5 (70-139)||(9958157-9958226)
chr5 (70-122)||(27407318-27407370)
chr5 (73-108)||(4938558-4938593)
chr5 (72-122)||(11958390-11958440)
chr5 (70-112)||(15973063-15973105)
chr5 (70-111)||(27595197-27595238)
chr5 (70-139)||(34917921-34917990)
chr5 (70-110)||(4218982-4219022)
chr5 (70-106)||(12913316-12913352)
chr5 (70-110)||(30644603-30644643)
chr5 (70-126)||(42318361-42318417)
chr5 (70-110)||(42804351-42804391)
[»] chr6 (3 HSPs)
chr6 (59-139)||(32360205-32360286)
chr6 (70-110)||(8222582-8222622)
chr6 (70-110)||(30446733-30446773)
[»] scaffold0015 (1 HSPs)
scaffold0015 (70-150)||(83434-83514)
[»] scaffold0004 (1 HSPs)
scaffold0004 (70-150)||(106306-106386)
[»] scaffold1905 (1 HSPs)
scaffold1905 (70-139)||(964-1033)
[»] scaffold1183 (1 HSPs)
scaffold1183 (70-107)||(121-158)


Alignment Details
Target: chr3 (Bit Score: 199; Significance: 1e-108; HSPs: 15)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 59 - 301
Target Start/End: Original strand, 49086599 - 49086840
Alignment:
Q  59 ttaatttcgagtgaaataattgagttgaaattattaagatgataaaaattcagacaaccaatcacaatcagccacgtgtcatccattatccatatgcaat 158  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||  |||||||||||||||||    
T  49086599 ttaatttcgagtgaaataattgagttgaaattattaagatgataaaaattcagacaatcaatcacaatcagctacgtgtcactcattatccatatgcaat 49086698  T
Q  159 tttctctctccgcctctcctgcagctcactcgcacctgtcggcgtgtgttgcgcacgcgccatgcttggctaactgttggcttcgcgcgtgttcctgtgg 258  Q
     |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||| ||||||| |||||||    
T  49086699 cttctctctccgcctctcctgcagctcactcgcacctgtcgacgtgtgttgcgcacgcgccatgcttggctaaatgttggcttc-cgcgtgtccctgtgg 49086797  T
Q  259 cagccgattaaacaatgttgaatgtgttcaacacttccctcct 301  Q
    |||||| ||||||||||||||||||||||||||||||||||||    
T  49086798 cagccggttaaacaatgttgaatgtgttcaacacttccctcct 49086840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 59 - 301
Target Start/End: Complemental strand, 49356898 - 49356658
Alignment:
Q  59 ttaatttcgagtgaaataattgagttgaaattattaagatgataaaaattcagacaaccaatcacaatcagccacgtgtc-atccattatccatatgcaa 157  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||| |||||||||||| || | |||||||||| |   |     
T  49356898 ttaatttcgagtgaaataattgagttgaaattattaagatgataaaaatccagacagccaatcagaatcagccacgtatcaacccattatccacaaagat 49356799  T
Q  158 ttttctctctccgcctctcctgcagctcactcgcacctgtcggcgtgtgttgcgcacgcgccatgcttggctaactgttggcttcgcgcgtgttcctgtg 257  Q
    | |||||||| ||  ||||||| | | ||||||| ||||||||||  |||||||||||||||||||||||| ||| |   ||||| ||||||| ||||||    
T  49356798 tcttctctcttcg-ttctcctg-accccactcgcgcctgtcggcgcttgttgcgcacgcgccatgcttggcaaacagcaagcttc-cgcgtgtccctgtg 49356702  T
Q  258 gcagccgattaaacaatgttgaatgtgttcaacacttccctcct 301  Q
     |||||| |  ||||||||||||||||||||||||||| |||||    
T  49356701 ccagccggtacaacaatgttgaatgtgttcaacacttctctcct 49356658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 59 - 183
Target Start/End: Complemental strand, 33795147 - 33795023
Alignment:
Q  59 ttaatttcgagtgaaataattgagttgaaattattaagatgataaaaattcagacaaccaatcacaatcagccacgtgtcatccattatccatatgcaat 158  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||| |  ||| ||||||| |||||| ||||||||| ||||||||||||    ||    
T  33795147 ttaatttcgagtgaaataattgggttgaaattattaagatgataaaaatccgaacagccaatcagaatcagtcacgtgtcacccattatccataaagcat 33795048  T
Q  159 tttctctctccgcctctcctgcagc 183  Q
     ||||||||||||||||||| ||||    
T  33795047 attctctctccgcctctcctacagc 33795023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 70 - 122
Target Start/End: Complemental strand, 46572555 - 46572503
Alignment:
Q  70 tgaaataattgagttgaaattattaagatgataaaaattcagacaaccaatca 122  Q
    ||||||||||||||| ||||||||||||||| |||||||||| ||||||||||    
T  46572555 tgaaataattgagttcaaattattaagatgacaaaaattcaggcaaccaatca 46572503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 70 - 123
Target Start/End: Complemental strand, 15493377 - 15493324
Alignment:
Q  70 tgaaataattgagttgaaattattaagatgataaaaattcagacaaccaatcac 123  Q
    ||||||||||||||| |||||||||| |||||||||||| ||||| ||||||||    
T  15493377 tgaaataattgagttcaaattattaaaatgataaaaatttagacagccaatcac 15493324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 72 - 110
Target Start/End: Complemental strand, 26549868 - 26549830
Alignment:
Q  72 aaataattgagttgaaattattaagatgataaaaattca 110  Q
    ||||||||||||| |||||||||||||||||||||||||    
T  26549868 aaataattgagttcaaattattaagatgataaaaattca 26549830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 70 - 107
Target Start/End: Complemental strand, 49406932 - 49406895
Alignment:
Q  70 tgaaataattgagttgaaattattaagatgataaaaat 107  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  49406932 tgaaataattgagttcaaattattaagatgataaaaat 49406895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 70 - 139
Target Start/End: Original strand, 53722968 - 53723037
Alignment:
Q  70 tgaaataattgagttgaaattattaagatgataaaaattcagacaaccaatcacaatcagccacgtgtca 139  Q
    ||||||||||||||| ||||||||||||||| | |||| || |||||||||||   ||||||| ||||||    
T  53722968 tgaaataattgagttcaaattattaagatgagataaatccaaacaaccaatcaagttcagccatgtgtca 53723037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 70 - 106
Target Start/End: Complemental strand, 47700535 - 47700499
Alignment:
Q  70 tgaaataattgagttgaaattattaagatgataaaaa 106  Q
    ||||||||||||||| |||||||||||||||||||||    
T  47700535 tgaaataattgagtttaaattattaagatgataaaaa 47700499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 72 - 122
Target Start/End: Complemental strand, 7520749 - 7520699
Alignment:
Q  72 aaataattgagttgaaattattaagatgataaaaattcagacaaccaatca 122  Q
    ||||||||||||| ||||||||||| |||||||||| || ||| |||||||    
T  7520749 aaataattgagtttaaattattaagttgataaaaatccaaacacccaatca 7520699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 70 - 170
Target Start/End: Original strand, 55027233 - 55027332
Alignment:
Q  70 tgaaataattgagttgaaattattaagatgataaaaattcagacaaccaatcacaatcagccacgtgtcatc-cattatccatatgcaattttctctctc 168  Q
    ||||||||||||||  ||| |||||||||||||||||| ||  || ||||||  |||||| |||||||| || | |||||||| |  |||||||||||||    
T  55027233 tgaaataattgagtctaaaatattaagatgataaaaatccaagcagccaatcgaaatcagacacgtgtcctcactttatccattt--aattttctctctc 55027330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 70 - 138
Target Start/End: Original strand, 7008586 - 7008654
Alignment:
Q  70 tgaaataattgagttgaaattattaagatgataaaaattcagacaaccaatcacaatcagccacgtgtc 138  Q
    ||||||||||||||  ||| |||||||||||||||||| ||  || ||||||| |  ||||||||||||    
T  7008586 tgaaataattgagtccaaaatattaagatgataaaaatccaagcagccaatcaaacccagccacgtgtc 7008654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 70 - 122
Target Start/End: Complemental strand, 26162141 - 26162089
Alignment:
Q  70 tgaaataattgagttgaaattattaagatgataaaaattcagacaaccaatca 122  Q
    ||||||||||||||  |||||||||||| |||||||||  || ||||||||||    
T  26162141 tgaaataattgagtccaaattattaagaagataaaaatcaagccaaccaatca 26162089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 70 - 122
Target Start/End: Complemental strand, 35471920 - 35471868
Alignment:
Q  70 tgaaataattgagttgaaattattaagatgataaaaattcagacaaccaatca 122  Q
    ||||||||||||||  |||||||||||| ||||||||| ||| || |||||||    
T  35471920 tgaaataattgagtccaaattattaagaagataaaaatccagccagccaatca 35471868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 70 - 122
Target Start/End: Original strand, 51974718 - 51974770
Alignment:
Q  70 tgaaataattgagttgaaattattaagatgataaaaattcagacaaccaatca 122  Q
    ||||||||||||||| |||||||||| |||| | |||||||| || |||||||    
T  51974718 tgaaataattgagttcaaattattaaaatgaaataaattcaggcagccaatca 51974770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 179; Significance: 1e-96; HSPs: 11)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 59 - 301
Target Start/End: Original strand, 33379745 - 33379986
Alignment:
Q  59 ttaatttcgagtgaaataattgagttgaaattattaagatgataaaaattcagacaaccaatcacaatcagccacgtgtcatccattatccatatgcaat 158  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||| ||||||||||||||||||||||    
T  33379745 ttaatttcgagtgaaataattgagttgaaattattaagatgataaaaatccagacaaccaatcacaatctgccacgtttcatccattatccatatgcaat 33379844  T
Q  159 tttctctctccgcctctcctgcagctcactcgcacctgtcggcgtgtgttgcgcacgcgccatgcttggctaactgttggcttcgcgcgtgttcctgtgg 258  Q
     || ||||||||||||||||||||||||||||| |||||||||| |||||||||||| |||||||||||| || |||| ||||| ||||||| |||||||    
T  33379845 cttgtctctccgcctctcctgcagctcactcgcgcctgtcggcgcgtgttgcgcacgagccatgcttggccaattgtttgcttc-cgcgtgtccctgtgg 33379943  T
Q  259 cagccgattaaacaatgttgaatgtgttcaacacttccctcct 301  Q
    ||| || ||||||||||||||||||||||||||||||||||||    
T  33379944 cagtcggttaaacaatgttgaatgtgttcaacacttccctcct 33379986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 70 - 139
Target Start/End: Original strand, 38352084 - 38352153
Alignment:
Q  70 tgaaataattgagttgaaattattaagatgataaaaattcagacaaccaatcacaatcagccacgtgtca 139  Q
    ||||||||||||||  |||||||||||| ||||||||||||  || ||||||  ||  ||||||||||||    
T  38352084 tgaaataattgagtccaaattattaagaagataaaaattcaagcagccaatcgtaacaagccacgtgtca 38352153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 70 - 107
Target Start/End: Original strand, 38970516 - 38970553
Alignment:
Q  70 tgaaataattgagttgaaattattaagatgataaaaat 107  Q
    |||||||||| |||| ||||||||||||||||||||||    
T  38970516 tgaaataatttagttcaaattattaagatgataaaaat 38970553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 70 - 107
Target Start/End: Complemental strand, 43201535 - 43201498
Alignment:
Q  70 tgaaataattgagttgaaattattaagatgataaaaat 107  Q
    ||||||||||||||| ||||||||||||||| ||||||    
T  43201535 tgaaataattgagttcaaattattaagatgagaaaaat 43201498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 71 - 120
Target Start/End: Original strand, 48985362 - 48985411
Alignment:
Q  71 gaaataattgagttgaaattattaagatgataaaaattcagacaaccaat 120  Q
    |||||||||||| | |||||||||| |||||||||||||  |||||||||    
T  48985362 gaaataattgaggtcaaattattaaaatgataaaaattcgaacaaccaat 48985411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 70 - 110
Target Start/End: Original strand, 20354727 - 20354767
Alignment:
Q  70 tgaaataattgagttgaaattattaagatgataaaaattca 110  Q
    ||||||||||||||  |||||||||||| ||||||||||||    
T  20354727 tgaaataattgagtccaaattattaagaagataaaaattca 20354767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 70 - 122
Target Start/End: Original strand, 26815598 - 26815650
Alignment:
Q  70 tgaaataattgagttgaaattattaagatgataaaaattcagacaaccaatca 122  Q
    ||||||||||||||  |||||||||||| ||||||||| ||| || |||||||    
T  26815598 tgaaataattgagtccaaattattaagaagataaaaatccagccagccaatca 26815650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 70 - 122
Target Start/End: Original strand, 32749417 - 32749469
Alignment:
Q  70 tgaaataattgagttgaaattattaagatgataaaaattcagacaaccaatca 122  Q
    ||||||||||||||  |||||||||||| ||||||||| ||| || |||||||    
T  32749417 tgaaataattgagtccaaattattaagaagataaaaatccagtcagccaatca 32749469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 70 - 122
Target Start/End: Original strand, 37889341 - 37889393
Alignment:
Q  70 tgaaataattgagttgaaattattaagatgataaaaattcagacaaccaatca 122  Q
    ||||||||||||| |  ||||||||| ||||||| ||| ||||||||||||||    
T  37889341 tgaaataattgaggtccaattattaaaatgataagaatccagacaaccaatca 37889393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 70 - 122
Target Start/End: Original strand, 37952251 - 37952303
Alignment:
Q  70 tgaaataattgagttgaaattattaagatgataaaaattcagacaaccaatca 122  Q
    ||||||||||||||  |||||||||||| ||||||||| ||| || |||||||    
T  37952251 tgaaataattgagtccaaattattaagaagataaaaatccagccagccaatca 37952303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 70 - 122
Target Start/End: Original strand, 40690803 - 40690855
Alignment:
Q  70 tgaaataattgagttgaaattattaagatgataaaaattcagacaaccaatca 122  Q
    ||||||||||||||  |||||||||||| ||||||||| ||| || |||||||    
T  40690803 tgaaataattgagtccaaattattaagaagataaaaatccagccagccaatca 40690855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 161; Significance: 7e-86; HSPs: 11)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 161; E-Value: 7e-86
Query Start/End: Original strand, 64 - 301
Target Start/End: Original strand, 36658906 - 36659146
Alignment:
Q  64 ttcgagtgaaataattgagttgaaattattaagatgataaaaattcagacaaccaatcacaatcagccacgtgtcatccattatccatatgcaatt---- 159  Q
    |||||||||||| ||||||| ||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||| |  ||||         
T  36658906 ttcgagtgaaatgattgagtagaaattattaagatgataaaaatccagacagccaatcacaatcagccacgtgtcatccattatccacaaacaatcaatc 36659005  T
Q  160 ttctctctccgcctctcctgcagctcactcgcacctgtcggcgtgtgttgcgcacgcgccatgcttggctaactgttggcttcgcgcgtgttcctgtggc 259  Q
    |||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||| ||||||||||||| ||||||| |||||||     
T  36659006 ttctctctccgcctctcctgcagctcactcgcgcctgtcggcgcgtgttgcgcacgcgccatgcttggccaactgttggcttc-cgcgtgtccctgtggt 36659104  T
Q  260 agccgattaaacaatgttgaatgtgttcaacacttccctcct 301  Q
    ||||| ||||||||||||||||||||||||||||||||||||    
T  36659105 agccggttaaacaatgttgaatgtgttcaacacttccctcct 36659146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 70 - 150
Target Start/End: Complemental strand, 39048664 - 39048584
Alignment:
Q  70 tgaaataattgagttgaaattattaagatgataaaaattcagacaaccaatcacaatcagccacgtgtcatccattatcca 150  Q
    ||||||||||||||| |||||||||| | || ||||||||||| | ||||||| |||||||||||||||| ||||||||||    
T  39048664 tgaaataattgagttcaaattattaaaaagagaaaaattcagaaagccaatcagaatcagccacgtgtcacccattatcca 39048584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 71 - 120
Target Start/End: Complemental strand, 31848394 - 31848345
Alignment:
Q  71 gaaataattgagttgaaattattaagatgataaaaattcagacaaccaat 120  Q
    |||||||||||| | |||||||||| ||||||||||||| ||||||||||    
T  31848394 gaaataattgaggtcaaattattaaaatgataaaaattcggacaaccaat 31848345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 70 - 219
Target Start/End: Original strand, 56054718 - 56054866
Alignment:
Q  70 tgaaataattgagttgaaattattaagatgataaaaattcagacaaccaatcacaatcagccacgtgtcatc-cattatccatatgcaattttctctctc 168  Q
    ||||||||||||||  ||| |||||||||||||||||| ||  || ||||||  |||||||||| ||||||| | |||||||| |  || ||||||||||    
T  56054718 tgaaataattgagtccaaaatattaagatgataaaaatccaagcagccaatcgaaatcagccacatgtcatcactttatccattt--aactttctctctc 56054815  T
Q  169 cgcctct-cctgcagctcactcgcacctgtcggcgtgtgttgcgcacgcgcc 219  Q
    ||   || ||| |||||||| ||| |||||||||| ||||  ||||||||||    
T  56054816 cggaactccctccagctcacgcgc-cctgtcggcgcgtgtaccgcacgcgcc 56054866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 70 - 111
Target Start/End: Complemental strand, 39113375 - 39113334
Alignment:
Q  70 tgaaataattgagttgaaattattaagatgataaaaattcag 111  Q
    ||||||||||||  | ||||||||||||||||||||||||||    
T  39113375 tgaaataattgaagtcaaattattaagatgataaaaattcag 39113334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 70 - 139
Target Start/End: Complemental strand, 39532784 - 39532715
Alignment:
Q  70 tgaaataattgagttgaaattattaagatgataaaaattcagacaaccaatcacaatcagccacgtgtca 139  Q
    ||||||||||||||| ||||||||||| ||| | |||| || |||||||||||   ||||||| ||||||    
T  39532784 tgaaataattgagttcaaattattaagttgagataaatccaaacaaccaatcaagttcagccatgtgtca 39532715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 74 - 122
Target Start/End: Complemental strand, 55549 - 55501
Alignment:
Q  74 ataattgagttgaaattattaagatgataaaaattcagacaaccaatca 122  Q
    |||| |||||| |||| ||||||||||||||||||||| || |||||||    
T  55549 ataagtgagttcaaataattaagatgataaaaattcagccagccaatca 55501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 70 - 122
Target Start/End: Complemental strand, 16171497 - 16171445
Alignment:
Q  70 tgaaataattgagttgaaattattaagatgataaaaattcagacaaccaatca 122  Q
    ||||||||||||||  |||||||||||| ||||||||| ||| || |||||||    
T  16171497 tgaaataattgagtccaaattattaagaagataaaaatccagccagccaatca 16171445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 70 - 138
Target Start/End: Complemental strand, 31336137 - 31336069
Alignment:
Q  70 tgaaataattgagttgaaattattaagatgataaaaattcagacaaccaatcacaatcagccacgtgtc 138  Q
    ||||||||||||||  ||| |||||| ||||||||||||||  || ||||||  || ||||||||||||    
T  31336137 tgaaataattgagtccaaaatattaaaatgataaaaattcaagcagccaatcgaaaccagccacgtgtc 31336069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 70 - 138
Target Start/End: Complemental strand, 48506195 - 48506127
Alignment:
Q  70 tgaaataattgagttgaaattattaagatgataaaaattcagacaaccaatcacaatcagccacgtgtc 138  Q
    ||||||||||||||  ||| |||||||||||||||||| ||  || ||||||  |||||| ||||||||    
T  48506195 tgaaataattgagtctaaaatattaagatgataaaaatccaagcagccaatcgaaatcagacacgtgtc 48506127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 70 - 110
Target Start/End: Complemental strand, 53347295 - 53347255
Alignment:
Q  70 tgaaataattgagttgaaattattaagatgataaaaattca 110  Q
    ||||||||||||||  |||||||||||| ||||||||||||    
T  53347295 tgaaataattgagtccaaattattaagaagataaaaattca 53347255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 135; Significance: 2e-70; HSPs: 14)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 59 - 301
Target Start/End: Original strand, 26414668 - 26414909
Alignment:
Q  59 ttaatttcgagtgaaataattgagttgaaattattaagatgataaaaattcagacaaccaatcacaatcagccacgtgtcatccattatccatatgcaat 158  Q
    ||||||| |||||||| |||||||||||||||||||| ||||||||||| |||||| ||||||| ||||| |||||||||| |||||||||| |  ||||    
T  26414668 ttaattttgagtgaaaaaattgagttgaaattattaacatgataaaaatccagacagccaatcaaaatcaaccacgtgtcacccattatccacaaacaat 26414767  T
Q  159 tttctctctccgcctctcctgcagctcactcgcacctgtcggcgtgtgttgcgcacgcgccatgcttggctaactgttggcttcgcgcgtgttcctgtgg 258  Q
     |||| ||||||||||||||||||||||| ||| |||||  ||| ||||||||||||||||||||||||| |||| |||||||| ||| ||| || ||||    
T  26414768 cttctatctccgcctctcctgcagctcacccgcgcctgttagcgcgtgttgcgcacgcgccatgcttggccaactattggcttc-cgcatgtcccagtgg 26414866  T
Q  259 cagccgattaaacaatgttgaatgtgttcaacacttccctcct 301  Q
    |||||  ||||||||||||||||||||||||||||||||||||    
T  26414867 cagccagttaaacaatgttgaatgtgttcaacacttccctcct 26414909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 59 - 301
Target Start/End: Original strand, 5736482 - 5736723
Alignment:
Q  59 ttaatttcgagtgaaataattgagttgaaattattaagatgataaaaattcagacaaccaatcacaatcagccacgtgtcatccattatccatatgcaat 158  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||| |||||| ||||||| ||||||||||||||||||||||||||| |  ||||    
T  5736482 ttaatttcaagtgaaataattgagttgaaattattaagatgataaaaatccagacagccaatcagaatcagccacgtgtcatccattatccacacacaat 5736581  T
Q  159 tttctctctccgcctctcctgcagctcactcgcacctgtcggcgtgtgttgcgcacgcgccatgcttggctaactgttggcttcgcgcgtgttcctgtgg 258  Q
     ||||||||||||||||||||    |||||||| | |||| ||| |||| |||||||||||||||||||| |  || | ||| | ||||||| |||||||    
T  5736582 cttctctctccgcctctcctgaccgtcactcgcgcttgtctgcgcgtgtagcgcacgcgccatgcttggccatttgcttgctgc-cgcgtgtccctgtgg 5736680  T
Q  259 cagccgattaaacaatgttgaatgtgttcaacacttccctcct 301  Q
    ||| | |||||||| |||||||   |||||||||| |||||||    
T  5736681 caggcaattaaacattgttgaaccggttcaacactcccctcct 5736723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 59 - 301
Target Start/End: Complemental strand, 34954942 - 34954701
Alignment:
Q  59 ttaatttcgagtgaaataattgagttgaaattattaagatgataaaaattcagacaaccaatcacaatcagccacgtgtc-atccattatccatatgcaa 157  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||| ||||||||||||||| | ||||||||||||   |     
T  34954942 ttaatttcgagtgaaataattgagttgaaattattaagatgataaaaatccagacagccaatcagaatcagccacgtgtcaacccattatccataaagat 34954843  T
Q  158 ttttctctctccgcctctcctgcagctcactcgcacctgtcggcgtgtgttgcgcacgcgccatgcttggctaactgttggcttcgcgcgtgttcctgtg 257  Q
      |||||||||||  |||||||||   ||||||| |||||||||  ||||||||||||||||| ||||||| ||| |   ||||| | || || |||       
T  34954842 gcttctctctccg-ttctcctgcacaccactcgcgcctgtcggcacgtgttgcgcacgcgccaggcttggcaaaccgcaagcttc-cacgcgtcccttac 34954745  T
Q  258 gcagccgattaaacaatgttgaatgtgttcaacacttccctcct 301  Q
     |||||| || ||| |||||||||||||||||||||||||||||    
T  34954744 ccagccggttcaaccatgttgaatgtgttcaacacttccctcct 34954701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 70 - 143
Target Start/End: Complemental strand, 17494174 - 17494102
Alignment:
Q  70 tgaaataattgagttgaaattattaagatgataaaaattcagacaaccaatcacaatcagccacgtgtcatcca 143  Q
    ||||||||||||||| ||||||||||||||| ||||| |||||||  |||||| ||||||||| |||| |||||    
T  17494174 tgaaataattgagttcaaattattaagatgagaaaaa-tcagacagtcaatcagaatcagccatgtgttatcca 17494102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 70 - 139
Target Start/End: Original strand, 231831 - 231900
Alignment:
Q  70 tgaaataattgagttgaaattattaagatgataaaaattcagacaaccaatcacaatcagccacgtgtca 139  Q
    ||||||||||||||| |||||||||  |||| || |||||||| | ||||||| |||||||| |||||||    
T  231831 tgaaataattgagttcaaattattagaatgagaataattcagatacccaatcagaatcagccgcgtgtca 231900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 70 - 139
Target Start/End: Original strand, 708242 - 708311
Alignment:
Q  70 tgaaataattgagttgaaattattaagatgataaaaattcagacaaccaatcacaatcagccacgtgtca 139  Q
    ||||||||||||||| |||||||||  |||| || |||||||| | ||||||| |||||||| |||||||    
T  708242 tgaaataattgagttcaaattattagaatgagaataattcagatacccaatcagaatcagccgcgtgtca 708311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 70 - 139
Target Start/End: Original strand, 745454 - 745523
Alignment:
Q  70 tgaaataattgagttgaaattattaagatgataaaaattcagacaaccaatcacaatcagccacgtgtca 139  Q
    ||||||||||||||| |||||||||  |||| || |||||||| | ||||||| |||||||| |||||||    
T  745454 tgaaataattgagttcaaattattagaatgagaataattcagatacccaatcagaatcagccgcgtgtca 745523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 70 - 139
Target Start/End: Original strand, 869349 - 869418
Alignment:
Q  70 tgaaataattgagttgaaattattaagatgataaaaattcagacaaccaatcacaatcagccacgtgtca 139  Q
    ||||||||||||||| |||||||||  |||| || |||||||| | ||||||| |||||||| |||||||    
T  869349 tgaaataattgagttcaaattattagaatgagaataattcagatacccaatcagaatcagccgcgtgtca 869418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 70 - 126
Target Start/End: Original strand, 35932332 - 35932388
Alignment:
Q  70 tgaaataattgagttgaaattattaagatgataaaaattcagacaaccaatcacaat 126  Q
    ||||||||||||||  ||| |||||||| ||||||||||||| || |||||||||||    
T  35932332 tgaaataattgagtccaaagtattaagaagataaaaattcagccagccaatcacaat 35932388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 71 - 120
Target Start/End: Original strand, 13817520 - 13817569
Alignment:
Q  71 gaaataattgagttgaaattattaagatgataaaaattcagacaaccaat 120  Q
    |||||||||||| | |||||||||| ||||||| ||||| ||||||||||    
T  13817520 gaaataattgaggtcaaattattaaaatgataagaattcggacaaccaat 13817569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 70 - 139
Target Start/End: Original strand, 23550218 - 23550287
Alignment:
Q  70 tgaaataattgagttgaaattattaagatgataaaaattcagacaaccaatcacaatcagccacgtgtca 139  Q
    ||||||||||||||  |||||||||||| ||||||||||||  || ||||||  ||  ||||||||||||    
T  23550218 tgaaataattgagtctaaattattaagaagataaaaattcaagcagccaatcgtaacaagccacgtgtca 23550287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 70 - 107
Target Start/End: Complemental strand, 31129054 - 31129017
Alignment:
Q  70 tgaaataattgagttgaaattattaagatgataaaaat 107  Q
    ||||||||||||||  ||||||||||||||||||||||    
T  31129054 tgaaataattgagtccaaattattaagatgataaaaat 31129017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 71 - 120
Target Start/End: Original strand, 42861175 - 42861224
Alignment:
Q  71 gaaataattgagttgaaattattaagatgataaaaattcagacaaccaat 120  Q
    |||||||||||| | |||||||||| ||||||||||| |||| |||||||    
T  42861175 gaaataattgaggtcaaattattaaaatgataaaaatccagataaccaat 42861224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 70 - 122
Target Start/End: Original strand, 29732157 - 29732209
Alignment:
Q  70 tgaaataattgagttgaaattattaagatgataaaaattcagacaaccaatca 122  Q
    ||||||||||||||  |||||||||||| ||||||||| || ||| |||||||    
T  29732157 tgaaataattgagtccaaattattaagaagataaaaatccaaacagccaatca 29732209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 119; Significance: 8e-61; HSPs: 14)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 119; E-Value: 8e-61
Query Start/End: Original strand, 59 - 301
Target Start/End: Complemental strand, 44450870 - 44450629
Alignment:
Q  59 ttaatttcgagtgaaataattgagttgaaattattaagatgataaaaattcagacaaccaatcacaatcagccacgtgtcatccattatccatatgcaat 158  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||| |||||| ||||||| ||||||||||||||||||||||||||| |  ||||    
T  44450870 ttaatttcgagtgaaataattgagttgaaattatttagatgataaaaatccagacagccaatcagaatcagccacgtgtcatccattatccacacacaat 44450771  T
Q  159 tttctctctccgcctctcctgcagctcactcgcacctgtcggcgtgtgttgcgcacgcgccatgcttggctaactgttggcttcgcgcgtgttcctgtgg 258  Q
     ||||||||||||||||||||    |||||||| |||||||||| |||| |||||||||||||||||||| |  ||   ||  | ||||||| |||||||    
T  44450770 cttctctctccgcctctcctgaccatcactcgcgcctgtcggcgcgtgtagcgcacgcgccatgcttggccatttgcatgcagc-cgcgtgtccctgtgg 44450672  T
Q  259 cagccgattaaacaatgttgaatgtgttcaacacttccctcct 301  Q
    ||| | ||||||||||||||||   ||||||||||||||||||    
T  44450671 caggcaattaaacaatgttgaaccggttcaacacttccctcct 44450629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 119; E-Value: 8e-61
Query Start/End: Original strand, 59 - 301
Target Start/End: Original strand, 44651539 - 44651780
Alignment:
Q  59 ttaatttcgagtgaaataattgagttgaaattattaagatgataaaaattcagacaaccaatcacaatcagccacgtgtcatccattatccatatgcaat 158  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||| |||||| ||||||| ||||||||||||||||||||||||||| |  ||||    
T  44651539 ttaatttcgagtgaaataattgagttgaaattatttagatgataaaaatccagacagccaatcagaatcagccacgtgtcatccattatccacacacaat 44651638  T
Q  159 tttctctctccgcctctcctgcagctcactcgcacctgtcggcgtgtgttgcgcacgcgccatgcttggctaactgttggcttcgcgcgtgttcctgtgg 258  Q
     ||||||||||||||||||||    |||||||| |||||||||| |||| |||||||||||||||||||| |  ||   ||  | ||||||| |||||||    
T  44651639 cttctctctccgcctctcctgaccgtcactcgcgcctgtcggcgcgtgtagcgcacgcgccatgcttggccatttgcatgcagc-cgcgtgtccctgtgg 44651737  T
Q  259 cagccgattaaacaatgttgaatgtgttcaacacttccctcct 301  Q
    ||| | ||||||||||||||||   ||||||||||||||||||    
T  44651738 caggcaattaaacaatgttgaaccggttcaacacttccctcct 44651780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 59 - 139
Target Start/End: Original strand, 8465030 - 8465110
Alignment:
Q  59 ttaatttcgagtgaaataa-ttgagttgaaattattaagatgataaaaattcagacaaccaatcacaatcagccacgtgtca 139  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||| |||| ||||||||| ||||||    
T  8465030 ttaatttcgagtgaaataaattgagttgaaattattaagatgataaaaaatcagacaacc-atcaaaatcagccatgtgtca 8465110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 70 - 122
Target Start/End: Complemental strand, 3754649 - 3754597
Alignment:
Q  70 tgaaataattgagttgaaattattaagatgataaaaattcagacaaccaatca 122  Q
    ||||||||||||||| ||||| |||||||||||||||||||| ||||||||||    
T  3754649 tgaaataattgagttcaaatttttaagatgataaaaattcaggcaaccaatca 3754597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 70 - 139
Target Start/End: Original strand, 39149608 - 39149676
Alignment:
Q  70 tgaaataattgagttgaaattattaagatgataaaaattcagacaaccaatcacaatcagccacgtgtca 139  Q
    |||||||||||| || ||||||||||||||| |||||| |||||| ||||||| |||||| |||||||||    
T  39149608 tgaaataattgaattcaaattattaagatga-aaaaatgcagacagccaatcagaatcagtcacgtgtca 39149676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 71 - 120
Target Start/End: Complemental strand, 643444 - 643395
Alignment:
Q  71 gaaataattgagttgaaattattaagatgataaaaattcagacaaccaat 120  Q
    |||||||||||| | |||||||||| ||||||||||||| ||||||||||    
T  643444 gaaataattgaggtcaaattattaaaatgataaaaattcggacaaccaat 643395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 70 - 139
Target Start/End: Original strand, 36303568 - 36303637
Alignment:
Q  70 tgaaataattgagttgaaattattaagatgataaaaattcagacaaccaatcacaatcagccacgtgtca 139  Q
    ||||||||||||||| |||||||||  |||| || |||| ||| | ||||||| ||||||||||||||||    
T  36303568 tgaaataattgagttcaaattattagaatgagaataatttagatagccaatcagaatcagccacgtgtca 36303637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 70 - 139
Target Start/End: Original strand, 48729906 - 48729975
Alignment:
Q  70 tgaaataattgagttgaaattattaagatgataaaaattcagacaaccaatcacaatcagccacgtgtca 139  Q
    ||||||||||||||| |||||||||  |||| || |||| ||| | ||||||| ||||||||||||||||    
T  48729906 tgaaataattgagttcaaattattagaatgagaataatttagatagccaatcagaatcagccacgtgtca 48729975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 73 - 106
Target Start/End: Complemental strand, 20584412 - 20584379
Alignment:
Q  73 aataattgagttgaaattattaagatgataaaaa 106  Q
    |||||||||||||||||||||||||||| |||||    
T  20584412 aataattgagttgaaattattaagatgaaaaaaa 20584379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 70 - 107
Target Start/End: Original strand, 36231392 - 36231429
Alignment:
Q  70 tgaaataattgagttgaaattattaagatgataaaaat 107  Q
    ||||||||||||||| ||| ||||||||||||||||||    
T  36231392 tgaaataattgagttcaaaatattaagatgataaaaat 36231429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 70 - 107
Target Start/End: Original strand, 45363949 - 45363986
Alignment:
Q  70 tgaaataattgagttgaaattattaagatgataaaaat 107  Q
    ||||||||||||||| |||||||||||| |||||||||    
T  45363949 tgaaataattgagttcaaattattaagaagataaaaat 45363986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 70 - 110
Target Start/End: Original strand, 8471684 - 8471724
Alignment:
Q  70 tgaaataattgagttgaaattattaagatgataaaaattca 110  Q
    ||||||||||||||  ||| |||||||||||||||||||||    
T  8471684 tgaaataattgagtccaaaatattaagatgataaaaattca 8471724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 70 - 138
Target Start/End: Complemental strand, 10265571 - 10265503
Alignment:
Q  70 tgaaataattgagttgaaattattaagatgataaaaattcagacaaccaatcacaatcagccacgtgtc 138  Q
    ||||||||||||||  ||| |||||||||||||||||| ||  || ||||||  || ||||||||||||    
T  10265571 tgaaataattgagtccaaaatattaagatgataaaaatccaagcagccaatcgaaaccagccacgtgtc 10265503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 70 - 110
Target Start/End: Original strand, 43739499 - 43739539
Alignment:
Q  70 tgaaataattgagttgaaattattaagatgataaaaattca 110  Q
    ||||||||||||||  ||| |||||||||||||||||||||    
T  43739499 tgaaataattgagtccaaaatattaagatgataaaaattca 43739539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 90; Significance: 2e-43; HSPs: 11)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 74 - 191
Target Start/End: Complemental strand, 2778747 - 2778630
Alignment:
Q  74 ataattgagttgaaattattaagatgataaaaattcagacaaccaatcacaatcagccacgtgtcatccattatccatatgcaattttctctctccgcct 173  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||| |   ||||||||||||||||||    
T  2778747 ataattgagttgaaattattaagatgataaaaatccagacaaccaatcaaaatcagccacgtgtcatccattatccacaaagaattttctctctccgcct 2778648  T
Q  174 ctcctgcagctcactcgc 191  Q
    |||||||||| |||||||    
T  2778647 ctcctgcagcacactcgc 2778630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 59 - 301
Target Start/End: Original strand, 16333769 - 16334010
Alignment:
Q  59 ttaatttcgagtgaaataattgagttgaaattattaagatgataaaaattcagacaaccaatcacaatcagccacgtgtcatc-cattatccatatgcaa 157  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||| |||||| ||||||| |||||||||||||||| | ||||||||| |   |     
T  16333769 ttaatttcgagtgaaataattgagttgaaattattaagatgataacaatccagacagccaatcagaatcagccacgtgtcaactcattatccacaaagat 16333868  T
Q  158 ttttctctctccgcctctcctgcagctcactcgcacctgtcggcgtgtgttgcgcacgcgccatgcttggctaactgttggcttcgcgcgtgttcctgtg 257  Q
    | |||||||||||  |||||||||   ||||||| |||||||||| ||||||||||||||||| ||||||| ||| |   ||||  | ||||| |||       
T  16333869 tcttctctctccg-ttctcctgcacaccactcgcgcctgtcggcgcgtgttgcgcacgcgccaagcttggcaaaccgcaagctt-acccgtgtcccttac 16333966  T
Q  258 gcagccgattaaacaatgttgaatgtgttcaacacttccctcct 301  Q
     || ||  || |||||||||||||||||||||||||||||||||    
T  16333967 ccaacccgttcaacaatgttgaatgtgttcaacacttccctcct 16334010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 59 - 301
Target Start/End: Complemental strand, 16125856 - 16125615
Alignment:
Q  59 ttaatttcgagtgaaataattgagttgaaattattaagatgataaaaattcagacaaccaatcacaatcagccacgtgtcatc-cattatccatatgcaa 157  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||| |||||| ||||||| ||||||||| |||||| | ||||||||| |   |     
T  16125856 ttaatttcgagtgaaataattgagttgaaattattaagatgataacaatccagacagccaatcagaatcagccatgtgtcaactcattatccacaaagat 16125757  T
Q  158 ttttctctctccgcctctcctgcagctcactcgcacctgtcggcgtgtgttgcgcacgcgccatgcttggctaactgttggcttcgcgcgtgttcctgtg 257  Q
    | |||||||||||  |||||||||   ||||||| |||||||||| |||||||||| ||| || ||||||| ||| |   ||||  |||||||  ||       
T  16125756 tcttctctctccg-ttctcctgcacaccactcgcgcctgtcggcgcgtgttgcgcatgcgtcaggcttggcaaaccgcaagctt-acgcgtgtctcttac 16125659  T
Q  258 gcagccgattaaacaatgttgaatgtgttcaacacttccctcct 301  Q
     || ||  || |||||||||||||||||||||||||||||||||    
T  16125658 ccaacccgttcaacaatgttgaatgtgttcaacacttccctcct 16125615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 214 - 295
Target Start/End: Complemental strand, 2778632 - 2778552
Alignment:
Q  214 cgcgccatgcttggctaactgttggcttcgcgcgtgttcctgtggcagccgattaaacaatgttgaatgtgttcaacacttc 295  Q
    ||||||||||||||| ||| ||| ||||| ||||||| ||||||||||  | ||||||||||||||||||||||||||||||    
T  2778632 cgcgccatgcttggccaacggtttgcttc-cgcgtgtccctgtggcaggtggttaaacaatgttgaatgtgttcaacacttc 2778552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 70 - 107
Target Start/End: Complemental strand, 13151212 - 13151175
Alignment:
Q  70 tgaaataattgagttgaaattattaagatgataaaaat 107  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  13151212 tgaaataattgagttcaaattattaagatgataaaaat 13151175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 70 - 107
Target Start/End: Complemental strand, 14151860 - 14151823
Alignment:
Q  70 tgaaataattgagttgaaattattaagatgataaaaat 107  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  14151860 tgaaataattgagttcaaattattaagatgataaaaat 14151823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 70 - 170
Target Start/End: Original strand, 9118296 - 9118395
Alignment:
Q  70 tgaaataattgagttgaaattattaagatgataaaaattcagacaaccaatcacaatcagccacgtgtcatc-cattatccatatgcaattttctctctc 168  Q
    ||||||||||||||  ||| |||||||||||||||||| ||  || ||||||  |||||| |||||||| || | |||||||| |  |||||||||||||    
T  9118296 tgaaataattgagtctaaaatattaagatgataaaaatccaagcagccaatcgaaatcagacacgtgtcctcactttatccattt--aattttctctctc 9118393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 70 - 110
Target Start/End: Complemental strand, 1308281 - 1308241
Alignment:
Q  70 tgaaataattgagttgaaattattaagatgataaaaattca 110  Q
    ||||||||||||||  |||||||||||| ||||||||||||    
T  1308281 tgaaataattgagtccaaattattaagaagataaaaattca 1308241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 70 - 110
Target Start/End: Complemental strand, 7762790 - 7762750
Alignment:
Q  70 tgaaataattgagttgaaattattaagatgataaaaattca 110  Q
    ||||||||||||||  |||||||||||| ||||||||||||    
T  7762790 tgaaataattgagtccaaattattaagaagataaaaattca 7762750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 70 - 110
Target Start/End: Original strand, 17486269 - 17486309
Alignment:
Q  70 tgaaataattgagttgaaattattaagatgataaaaattca 110  Q
    ||||||||||||||  |||||||||||| ||||||||||||    
T  17486269 tgaaataattgagtccaaattattaagaagataaaaattca 17486309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 70 - 110
Target Start/End: Original strand, 39490600 - 39490640
Alignment:
Q  70 tgaaataattgagttgaaattattaagatgataaaaattca 110  Q
    ||||||||||||||  |||||||||||| ||||||||||||    
T  39490600 tgaaataattgagtccaaattattaagaagataaaaattca 39490640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 17)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 72 - 122
Target Start/End: Complemental strand, 37882094 - 37882044
Alignment:
Q  72 aaataattgagttgaaattattaagatgataaaaattcagacaaccaatca 122  Q
    ||||||||||||| ||||||||||||||||||||||||||| |||||||||    
T  37882094 aaataattgagttcaaattattaagatgataaaaattcagataaccaatca 37882044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 70 - 111
Target Start/End: Complemental strand, 34529011 - 34528970
Alignment:
Q  70 tgaaataattgagttgaaattattaagatgataaaaattcag 111  Q
    ||||||||||||||| ||||||||||||||||||||||||||    
T  34529011 tgaaataattgagttcaaattattaagatgataaaaattcag 34528970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 70 - 122
Target Start/End: Complemental strand, 8680918 - 8680866
Alignment:
Q  70 tgaaataattgagttgaaattattaagatgataaaaattcagacaaccaatca 122  Q
    |||||||||| | || |||||||||||||||||||||||||| ||||||||||    
T  8680918 tgaaataattaaattcaaattattaagatgataaaaattcaggcaaccaatca 8680866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 70 - 110
Target Start/End: Original strand, 14279297 - 14279337
Alignment:
Q  70 tgaaataattgagttgaaattattaagatgataaaaattca 110  Q
    ||||||||||||||| |||||||||||||||||||||||||    
T  14279297 tgaaataattgagttcaaattattaagatgataaaaattca 14279337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 61 - 106
Target Start/End: Original strand, 25653282 - 25653328
Alignment:
Q  61 aatttcgagtgaaataa-ttgagttgaaattattaagatgataaaaa 106  Q
    ||||||||||||||||| |||||||| ||||||||||||||||||||    
T  25653282 aatttcgagtgaaataaattgagttggaattattaagatgataaaaa 25653328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 70 - 139
Target Start/End: Original strand, 9958157 - 9958226
Alignment:
Q  70 tgaaataattgagttgaaattattaagatgataaaaattcagacaaccaatcacaatcagccacgtgtca 139  Q
    ||||||||||||||  |||||||||||| ||||||||||||  |||||||||  ||  ||||||||||||    
T  9958157 tgaaataattgagtccaaattattaagaagataaaaattcaagcaaccaatcgtaacaagccacgtgtca 9958226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 70 - 122
Target Start/End: Complemental strand, 27407370 - 27407318
Alignment:
Q  70 tgaaataattgagttgaaattattaagatgataaaaattcagacaaccaatca 122  Q
    |||||||||| |||| ||||||||||||||| |||||||||  ||||||||||    
T  27407370 tgaaataatttagttcaaattattaagatgacaaaaattcatgcaaccaatca 27407318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 73 - 108
Target Start/End: Original strand, 4938558 - 4938593
Alignment:
Q  73 aataattgagttgaaattattaagatgataaaaatt 108  Q
    |||||||||||| |||||||||||||||||||||||    
T  4938558 aataattgagttcaaattattaagatgataaaaatt 4938593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 72 - 122
Target Start/End: Original strand, 11958390 - 11958440
Alignment:
Q  72 aaataattgagttgaaattattaagatgataaaaattcagacaaccaatca 122  Q
    |||||| |||||| |||| ||||||| |||||||||||||||| |||||||    
T  11958390 aaataagtgagttcaaataattaagacgataaaaattcagacagccaatca 11958440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 70 - 112
Target Start/End: Original strand, 15973063 - 15973105
Alignment:
Q  70 tgaaataattgagttgaaattattaagatgataaaaattcaga 112  Q
    ||||||||||||||| |||||||||||| || |||||||||||    
T  15973063 tgaaataattgagttcaaattattaagaagagaaaaattcaga 15973105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 70 - 111
Target Start/End: Complemental strand, 27595238 - 27595197
Alignment:
Q  70 tgaaataattgagttgaaattattaagatgataaaaattcag 111  Q
    |||||||||||||||||||| |||||||||| ||| ||||||    
T  27595238 tgaaataattgagttgaaataattaagatgagaaacattcag 27595197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 70 - 139
Target Start/End: Complemental strand, 34917990 - 34917921
Alignment:
Q  70 tgaaataattgagttgaaattattaagatgataaaaattcagacaaccaatcacaatcagccacgtgtca 139  Q
    |||||||||| |||  ||||||||||||||| | |||| || ||||||||||| | ||||||| ||||||    
T  34917990 tgaaataattaagtacaaattattaagatgagataaatccaaacaaccaatcagattcagccatgtgtca 34917921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 70 - 110
Target Start/End: Complemental strand, 4219022 - 4218982
Alignment:
Q  70 tgaaataattgagttgaaattattaagatgataaaaattca 110  Q
    ||||||||||||||  |||||||||||| ||||||||||||    
T  4219022 tgaaataattgagtccaaattattaagaagataaaaattca 4218982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 70 - 106
Target Start/End: Original strand, 12913316 - 12913352
Alignment:
Q  70 tgaaataattgagttgaaattattaagatgataaaaa 106  Q
    ||||||||||||||| ||||||||||| |||||||||    
T  12913316 tgaaataattgagtttaaattattaagttgataaaaa 12913352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 70 - 110
Target Start/End: Complemental strand, 30644643 - 30644603
Alignment:
Q  70 tgaaataattgagttgaaattattaagatgataaaaattca 110  Q
    ||||||||||||||  ||| |||||||||||||||||||||    
T  30644643 tgaaataattgagtccaaaatattaagatgataaaaattca 30644603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 70 - 126
Target Start/End: Original strand, 42318361 - 42318417
Alignment:
Q  70 tgaaataattgagttgaaattattaagatgataaaaattcagacaaccaatcacaat 126  Q
    ||||||||||||||  ||| |||||||| ||||||||| ||| || |||||||||||    
T  42318361 tgaaataattgagtccaaagtattaagaagataaaaatccagccagccaatcacaat 42318417  T

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Target: chr5; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 70 - 110
Target Start/End: Complemental strand, 42804391 - 42804351
Alignment:
Q  70 tgaaataattgagttgaaattattaagatgataaaaattca 110  Q
    ||||||||||||||  |||||||||||| ||||||||||||    
T  42804391 tgaaataattgagtccaaattattaagaagataaaaattca 42804351  T

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Target: chr6 (Bit Score: 38; Significance: 0.000000000002; HSPs: 3)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 59 - 139
Target Start/End: Original strand, 32360205 - 32360286
Alignment:
Q  59 ttaatttcgagtgaaataatt-gagttgaaattattaagatgataaaaattcagacaaccaatcacaatcagccacgtgtca 139  Q
    ||||||||||||||||||| | |||||  ||||||||||||||||||||   ||||| ||||||| ||||||||| ||||||    
T  32360205 ttaatttcgagtgaaataaatcgagtttgaattattaagatgataaaaaacgagacagccaatcagaatcagccatgtgtca 32360286  T

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Target: chr6; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 70 - 110
Target Start/End: Original strand, 8222582 - 8222622
Alignment:
Q  70 tgaaataattgagttgaaattattaagatgataaaaattca 110  Q
    ||||||||||||||  ||| |||||||||||||||||||||    
T  8222582 tgaaataattgagtccaaaatattaagatgataaaaattca 8222622  T

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Target: chr6; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 70 - 110
Target Start/End: Original strand, 30446733 - 30446773
Alignment:
Q  70 tgaaataattgagttgaaattattaagatgataaaaattca 110  Q
    ||||||||||||||  ||| |||||||||||||||||||||    
T  30446733 tgaaataattgagtccaaaatattaagatgataaaaattca 30446773  T

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Target: scaffold0015 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 70 - 150
Target Start/End: Complemental strand, 83514 - 83434
Alignment:
Q  70 tgaaataattgagttgaaattattaagatgataaaaattcagacaaccaatcacaatcagccacgtgtcatccattatcca 150  Q
    ||||||||||||||  |||||||||||| ||||||||| ||| || ||||||| | |  |||||||||| | |||||||||    
T  83514 tgaaataattgagtccaaattattaagaagataaaaatccagccagccaatcagattgcgccacgtgtcctgcattatcca 83434  T

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Target: scaffold0004 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 70 - 150
Target Start/End: Original strand, 106306 - 106386
Alignment:
Q  70 tgaaataattgagttgaaattattaagatgataaaaattcagacaaccaatcacaatcagccacgtgtcatccattatcca 150  Q
    ||||||||||||||  |||||||||||| ||||||||| ||| || ||||||| |||   ||||||||| | |||||||||    
T  106306 tgaaataattgagtccaaattattaagaagataaaaatccagccagccaatcaaaatgcaccacgtgtcctgcattatcca 106386  T

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Target: scaffold1905 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold1905
Description:

Target: scaffold1905; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 70 - 139
Target Start/End: Complemental strand, 1033 - 964
Alignment:
Q  70 tgaaataattgagttgaaattattaagatgataaaaattcagacaaccaatcacaatcagccacgtgtca 139  Q
    ||||||||||||||  |||||||||||| ||||||||||||  || ||||||  ||  ||||||||||||    
T  1033 tgaaataattgagtcaaaattattaagaagataaaaattcaagcagccaatcgtaacaagccacgtgtca 964  T

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Target: scaffold1183 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold1183
Description:

Target: scaffold1183; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 70 - 107
Target Start/End: Original strand, 121 - 158
Alignment:
Q  70 tgaaataattgagttgaaattattaagatgataaaaat 107  Q
    ||||||||||||||  ||||||||||||||||||||||    
T  121 tgaaataattgagtcaaaattattaagatgataaaaat 158  T

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