View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19275_low_3 (Length: 599)

Name: NF19275_low_3
Description: NF19275
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19275_low_3
NF19275_low_3
[»] chr3 (2 HSPs)
chr3 (7-582)||(24564690-24565265)
chr3 (183-277)||(14164926-14165020)
[»] chr8 (7 HSPs)
chr8 (13-565)||(45532792-45533349)
chr8 (7-533)||(44338865-44339387)
chr8 (7-536)||(44335587-44336113)
chr8 (418-581)||(40389524-40389688)
chr8 (148-403)||(29633314-29633561)
chr8 (418-581)||(29633594-29633757)
chr8 (163-319)||(40389260-40389416)
[»] chr1 (2 HSPs)
chr1 (22-122)||(19190095-19190196)
chr1 (418-581)||(48279680-48279844)
[»] chr6 (2 HSPs)
chr6 (419-580)||(23095887-23096051)
chr6 (193-277)||(23096176-23096260)
[»] scaffold0295 (1 HSPs)
scaffold0295 (183-277)||(16257-16351)
[»] scaffold0039 (1 HSPs)
scaffold0039 (418-581)||(83284-83448)
[»] chr2 (1 HSPs)
chr2 (194-253)||(24867465-24867524)


Alignment Details
Target: chr3 (Bit Score: 572; Significance: 0; HSPs: 2)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 572; E-Value: 0
Query Start/End: Original strand, 7 - 582
Target Start/End: Complemental strand, 24565265 - 24564690
Alignment:
Q  7 ttatatattttctaatttatgatggacatttctggttcccttcaagtatgtttttcagaattgtttataatttatgtttttgagagaattagtttttcat 106  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24565265 ttatatattttctaatttatgatggacatttctggttcccttcaagtatgtttttcagaattgtttataatttatgtttttgagagaattagtttttcat 24565166  T
Q  107 atttagtcatcttaatatgtatatctttatacaaaggatgcggacctttgatgtgaatttttgtcattcaaatttcatccttacctagtgatctttatta 206  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24565165 atttagtcatcttaatatgtatatctttatacaaaggatgcggacctttgatgtgaatttttgtcattcaaatttcatccttacctagtgatctttatta 24565066  T
Q  207 catttggtattgtagagatagagaaaagatgaagaaataggaaaggactagggcatcaaggccacatttttcatcaaccagtttttcgatagagaaatgg 306  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  24565065 catttggtattgtagagatagagaaaagatgaagaaataggaaaggactagggcatcaaggccacatttttcatcaatcagtttttcgatagagaaatgg 24564966  T
Q  307 agacatttcggtgtctgtggcagtgacgaagtcacacagtagtcggtgcagtggggggccaagtttcttactgggagatggtggtggacgtgctatgcta 406  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24564965 agacatttcggtgtctgtggcagtgacgaagtcacacagtagtcggtgcagtggggggccaagtttcttactgggagatggtggtggacgtgctatgcta 24564866  T
Q  407 acgtatcgacgagaaaactttcatgttctttcttctccatttcaggaaaggtatatagtgctcttctctcaacatgtaaatatttttgtctgggttacat 506  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24564865 acgtatcgacgagaaaactttcatgttctttcttctccatttcaggaaaggtatatagtgctcttctctcaacatgtaaatatttttgtctgggttacat 24564766  T
Q  507 cttttttctgttcttatttgttttattagtccgtggtagcagactcaccattcttgaagaggtcaaggtattggat 582  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24564765 cttttttctgttcttatttgttttattagtccgtggtagcagactcaccattcttgaagaggtcaaggtattggat 24564690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 183 - 277
Target Start/End: Complemental strand, 14165020 - 14164926
Alignment:
Q  183 atccttacctagtgatctttattacatttggtattgtagagatagagaaaagatgaagaaataggaaaggactagggcatcaaggccacattttt 277  Q
    ||||||| | ||||||| |||||||| ||||| ||| ||||| ||||||||| |||||||||||||||||| | | |||||||||||||||||||    
T  14165020 atccttagcaagtgatcattattacacttggttttgaagagacagagaaaaggtgaagaaataggaaaggagttgagcatcaaggccacattttt 14164926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 250; Significance: 1e-138; HSPs: 7)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 250; E-Value: 1e-138
Query Start/End: Original strand, 13 - 565
Target Start/End: Original strand, 45532792 - 45533349
Alignment:
Q  13 attttctaatttatgatggacatttctggttcccttcaagtatgtttttcagaattgtttataatttatgtttttgagagaattagtttttcatatttag 112  Q
    |||||||||||||||||||| ||||||||||||| |||||||||||||||| ||| ||||||| | ||||||||||||||||||||||||||||||||||    
T  45532792 attttctaatttatgatggagatttctggttcccgtcaagtatgtttttcataatcgtttatattgtatgtttttgagagaattagtttttcatatttag 45532891  T
Q  113 tcatcttaatatgtat----atcttta---------------tacaaaggatgcggacctttgatgtgaatttttgtcattcaaatttcatccttaccta 193  Q
    |||||||||| | |||    |||| ||               ||||||||||| | ||||||||| |||||||||||||||||||||||||||||||| |    
T  45532892 tcatcttaatctatatctttatctatacattataagaaaaattacaaaggatgtgaacctttgatctgaatttttgtcattcaaatttcatccttaccaa 45532991  T
Q  194 gtgatctttattacatttggtattgtagagatagagaaaagatgaagaaataggaaaggactagggcatcaaggccacatttttcatcaaccagtttttc 293  Q
     |||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||| | ||||||||||||||||||||||                   
T  45532992 atgatctttattacatttggttttgtagagatagagaaaagatcaagaaataggaaaggagtggggcatcaaggccacatttttc--------------- 45533076  T
Q  294 gatagagaaatggagacatttcggtgtctgtggcagtgacgaagtcacacagtagtcggtgcagtggggggccaagtttcttactgggagatggtggtgg 393  Q
    ||| ||||||||| |||||||||||||| |||| ||||| ||||||||| |||||||||||| || |||| |||||||||| ||||| |||||| ||||     
T  45533077 gatggagaaatggtgacatttcggtgtcggtggtagtgaagaagtcacaaagtagtcggtgcggtagggg-ccaagtttctaactggaagatggcggtga 45533175  T
Q  394 acgtgctatgctaacgtatcgacgagaaaactttcatgttctttcttctccatttcaggaaaggtatatag--tgctcttctctcaacatgtaaatattt 491  Q
       |||||||||||||||| |||||||||||||| ||||||||||||||| ||||| | |||||||||||   |||||||||||||  ||||||||||||    
T  45533176 ttatgctatgctaacgtatagacgagaaaactttgatgttctttcttctctatttctgaaaaggtatatatactgctcttctctcagtatgtaaatattt 45533275  T
Q  492 ttgtctgggttacatcttttttctgttcttatttgttttattagtccgtggtagcagactcaccattcttgaag 565  Q
    ||||||  || |||||||||||||||||||||||||||||||||||| ||| |||| |||||||||||||||||    
T  45533276 ttgtctaagtcacatcttttttctgttcttatttgttttattagtccatggcagcaaactcaccattcttgaag 45533349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 154; E-Value: 2e-81
Query Start/End: Original strand, 7 - 533
Target Start/End: Complemental strand, 44339387 - 44338865
Alignment:
Q  7 ttatatattttctaatttatgatggacatttctggttcccttcaagtatgtttttcagaattgtttataatttatgtttttgagagaattagtttttcat 106  Q
    ||||||||||||||||||| |||||| |||| | ||||||||| | | |||||||||          || ||||||||||||||||||||||||||||||    
T  44339387 ttatatattttctaatttacgatggatatttatcgttcccttccaatgtgtttttca----------tagtttatgtttttgagagaattagtttttcat 44339298  T
Q  107 atttagtcatcttaatatgtat----atctttatac-------aaaggatgcggacctttgatgtgaatttttgtcattcaaatttcatccttacctagt 195  Q
    ||| ||| || ||||| | |||    |||| || ||       |||||||| ||||||||||| |  |||||| |||||| ||||||||||||||| |||    
T  44339297 attaagtaattttaatctatatctttatctatacactataacaaaaggatgtggacctttgatttcgatttttatcattccaatttcatccttaccaagt 44339198  T
Q  196 gatctttattacatttggtattgtagagatagagaaaagatgaagaaataggaaaggactagggcatcaaggccacatttttcatcaaccagtttttcga 295  Q
    ||||| | ||||| ||||| ||||||||| ||||||||||||||||||||||||||||   | | |||||||||||||||||||||| | | ||| | ||    
T  44339197 gatctgttttacacttggttttgtagagacagagaaaagatgaagaaataggaaaggaggggagaatcaaggccacatttttcatcagcaactttattga 44339098  T
Q  296 tagagaaatggagacatttcggtgtctgtggcagtgacgaagtcacacagtagtcggtgcagtggggggccaagtttcttactgggagatggtggtggac 395  Q
    ||||||| | |||||||||||||| || ||      | ||||||||| |||||||| ||||||||||| | |||||| | ||  |||||||| |||||||    
T  44339097 tagagaagtcgagacatttcggtggctttg------aagaagtcacaaagtagtcgatgcagtgggggac-aagtttttaaccaggagatggcggtggac 44339005  T
Q  396 gtgctatgctaacgtatcgacgagaaaact---ttcatgttctttcttctccatttcaggaaaggtatatagtgctcttctctcaacatgtaaatatttt 492  Q
    ||||||||||||||||  || |||||||||   ||  |||||||||||||| |||||| |||||||||||| ||||||||| |||| |||||||||||||    
T  44339004 gtgctatgctaacgtagagatgagaaaactaatttactgttctttcttctctatttcaagaaaggtatatactgctcttctttcaatatgtaaatatttt 44338905  T
Q  493 tgtctgggttacatcttttttctgttcttatttgttttatt 533  Q
    | | |||||||||| || ||| |||||||||||||||||||    
T  44338904 tatttgggttacat-ttgtttatgttcttatttgttttatt 44338865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 147; E-Value: 3e-77
Query Start/End: Original strand, 7 - 536
Target Start/End: Original strand, 44335587 - 44336113
Alignment:
Q  7 ttatatattttctaatttatgatggacatttctggttcccttcaagtatgtttttcagaattgtttataatttatgtttttgagagaattagtttttcat 106  Q
    ||||||||||||||||||| |||||| |||| | ||||||||| |||||||||||||          || ||||||||||||||||||||| ||||||||    
T  44335587 ttatatattttctaatttacgatggatatttatcgttcccttcgagtatgtttttca----------tattttatgtttttgagagaattaatttttcat 44335676  T
Q  107 atttagtcatcttaatatgtatatctttataca-------------aaggatgcggacctttgatgtgaatttttgtcattcaaatttcatccttaccta 193  Q
    ||| ||  || ||||| |  |||||||||| ||             ||||||| ||||||||||| |  |||||| |||||| ||||||||||||||| |    
T  44335677 attaaggaattttaatct--atatctttatccatacactataacaaaaggatgtggacctttgattttgatttttatcattccaatttcatccttaccaa 44335774  T
Q  194 gtgatctttattacatttggtattgtagagatagagaaaagatgaagaaataggaaaggactagggcatcaaggccacatttttcatcaaccagtttttc 293  Q
    ||||||| | ||||| ||||| |||||||||  |||||||||||||||||||||||||||   | |||||||||||||||||||||||| | | ||| |     
T  44335775 gtgatctgttttacacttggttttgtagagacggagaaaagatgaagaaataggaaaggaggggagcatcaaggccacatttttcatcagcaactttatt 44335874  T
Q  294 gatagagaaatggagacatttcggtgtctgtggcagtgacgaagtcacacagtagtcggtgcagtggggggccaagtttcttactgggagatggtggtgg 393  Q
    ||||||||| | |||||||||||||  ||       ||| ||||||||| |||||||||||| |  ||||| ||||||| | ||  ||||||| ||||||    
T  44335875 gatagagaagtcgagacatttcggtaact------ttgaagaagtcacaaagtagtcggtgc-gatgggggacaagtttttaaccaggagatgatggtgg 44335967  T
Q  394 acgtgctatgctaacgtatcgacgagaaaac---tttcatgttctttcttctccatttcaggaaaggtatatagtgctcttctctcaacatgtaaatatt 490  Q
    ||||||||||||||||||  || ||||||||   |||  | |||||||||||| ||||||||||||||||||  ||||||||| |||| |||||||||||    
T  44335968 acgtgctatgctaacgtagagatgagaaaactaatttactattctttcttctctatttcaggaaaggtatattctgctcttctttcaatatgtaaatatt 44336067  T
Q  491 tttgtctgggttacatcttttttctgttcttatttgttttattagt 536  Q
    ||||| |||||||||| || ||| |||| |||||||||||||||||    
T  44336068 tttgtttgggttacattttgtttatgtttttatttgttttattagt 44336113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 418 - 581
Target Start/End: Original strand, 40389524 - 40389688
Alignment:
Q  418 agaaaactttcatgttctttcttctccatttcaggaaaggtatatagtgctcttctctc---aacatgtaaatatttttgtctgggttacatcttttt-t 513  Q
    ||||||||||||||||||||||||||   ||||| ||||||| ||| ||||||||||||   || || ||| | |||||||| ||||||||| ||||| |    
T  40389524 agaaaactttcatgttctttcttctc---ttcagaaaaggtagatactgctcttctctcaataagatataagtctttttgtccgggttacatttttttat 40389620  T
Q  514 ctgttcttatttgttttatta-gtccgtggtagcagactcaccattcttgaagaggtcaaggtattgga 581  Q
    || ||||||| ||   ||||| |||| ||||||||||| |||||||||||| ||||||||| |||||||    
T  40389621 ctattcttatatg-gctattatgtccatggtagcagacacaccattcttgatgaggtcaagatattgga 40389688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 148 - 403
Target Start/End: Original strand, 29633314 - 29633561
Alignment:
Q  148 ggacctttgatgtgaatttttgtcattcaaatttcatccttacctagtgatctttattacatttggtattgtagagatagagaaaagatgaagaaatagg 247  Q
    |||||||| || || |||||| |||||| ||||  || |||| | ||||||| |||||||| ||||| ||| ||||  | |||||| || ||||||||||    
T  29633314 ggacctttaatctggatttttatcattccaattctattcttagcaagtgatcgttattacacttggtcttgaagaggcaaagaaaatataaagaaatagg 29633413  T
Q  248 aaaggactagggcatcaaggccacatttttcatcaaccagtttttcgatagagaaatggagacatttcggtgtctgtggcagtgacgaagtcacacagta 347  Q
    ||| || ||||| ||||| ||||  ||||||| |  |||||||| |||||| ||||||| || |||| |      |||||||||| ||| ||||| || |    
T  29633414 aaacgagtagggtatcaatgccatgtttttcaactgccagttttgcgatagggaaatggggatattttg------gtggcagtgaagaaatcacaaagca 29633507  T
Q  348 gtcggtgcagtggggggccaagtttcttactgggagatggtggtggacgtgctatg 403  Q
    |||||||||   |||||| |||||| | ||| |||||||| ||||| | |||||||    
T  29633508 gtcggtgca--tgggggctaagtttttaactaggagatggcggtggtcctgctatg 29633561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 418 - 581
Target Start/End: Original strand, 29633594 - 29633757
Alignment:
Q  418 agaaaactttcatgttctttcttctccatttcaggaaaggtatatagtgctcttctctc---aacatgtaaatatttttgtctgggttacatcttttt-t 513  Q
    ||||||||||||||||||||||||||   ||||| ||||| | ||| || |||||||||   || |||||| | |||||||  ||||||||| ||||| |    
T  29633594 agaaaactttcatgttctttcttctc---ttcagaaaaggcagatattgttcttctctcaataagatgtaagtctttttgttcgggttacatttttttat 29633690  T
Q  514 ctgttcttatttgttttatta-gtccgtggtagcagactcaccattcttgaagaggtcaaggtattgga 581  Q
    || ||||||||||   ||||| |||  ||||||||||| | |||||||||| ||||||||| |||||||    
T  29633691 ctattcttatttg-gctattacgtctatggtagcagacac-ccattcttgatgaggtcaagatattgga 29633757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 163 - 319
Target Start/End: Original strand, 40389260 - 40389416
Alignment:
Q  163 atttttgtcattcaaatttcatccttacctagtgatctttattacatttggtattgtagagatagagaaaagatgaagaaataggaaaggactagggcat 262  Q
    |||||| |||||| ||||  || |||| | ||||||| |||||||| ||| | ||| ||||  | |||||| || ||||||||||||| || ||||| ||    
T  40389260 atttttatcattccaattctattcttagcaagtgatcgttattacacttgatcttgaagaggcaaagaaaatataaagaaataggaaacgagtagggtat 40389359  T
Q  263 caaggccacatttttcatcaaccagtttttcgatagagaaatggagacatttcggtg 319  Q
    ||| ||||  ||||||| |  |||||||| |||||  ||||||| ||||||| ||||    
T  40389360 caatgccatgtttttcaactgccagttttgcgatatggaaatggggacattttggtg 40389416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 82; Significance: 2e-38; HSPs: 2)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 22 - 122
Target Start/End: Original strand, 19190095 - 19190196
Alignment:
Q  22 tttatgatggacatttctggttcccttcaagtatgtttttc-agaattgtttataatttatgtttttgagagaattagtttttcatatttagtcatctta 120  Q
    |||||||| |||||||||||||||||||||||||||||||  ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  19190095 tttatgattgacatttctggttcccttcaagtatgtttttttagaattgtttatattttatgtttttgagagaattagtttttcatatttagtcatctta 19190194  T
Q  121 at 122  Q
    ||    
T  19190195 at 19190196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 418 - 581
Target Start/End: Original strand, 48279680 - 48279844
Alignment:
Q  418 agaaaactttcatgttctttcttctccatttcaggaaaggtatatagtgctcttctctc---aacatgtaaatatttttgtctgggttacatcttttt-t 513  Q
    ||||||||||||||||||||||||||   ||||| ||||||| ||| ||||||||||||   || |||||  | |||||||  |||||| || ||||| |    
T  48279680 agaaaactttcatgttctttcttctc---ttcagaaaaggtagatactgctcttctctcaataagatgtaggtctttttgttcgggttatatttttttat 48279776  T
Q  514 ctgttcttatttgttttatta-gtccgtggtagcagactcaccattcttgaagaggtcaaggtattgga 581  Q
    || ||||||||||   ||||| ||||  |||||||||| |||||||||||| ||||||||| |||||||    
T  48279777 ctattcttatttg-gctattatgtccagggtagcagacacaccattcttgatgaggtcaagatattgga 48279844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 57; Significance: 2e-23; HSPs: 2)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 419 - 580
Target Start/End: Complemental strand, 23096051 - 23095887
Alignment:
Q  419 gaaaactttcatgttctttcttctccatttcaggaaaggtatatagtgctcttctctcaacatgtaaatatttttgtctgggttacatcttttttc-tgt 517  Q
    |||| ||| ||||||||||||||||  |||||||||||||||||| | || ||||||||| |||||||| ||||||||| |||||||  ||||  | |||    
T  23096051 gaaatcttccatgttctttcttctctctttcaggaaaggtatatacttctattctctcaatatgtaaatctttttgtctaggttacaatttttaacatgt 23095952  T
Q  518 tcttatttgttttatta-gtccgtggtagcagactcaccattcttgaagaggtca-aggtattgg 580  Q
    |  |||||||||||||| ||| |||||||||||| | |||||||||| || |||| |||||||||    
T  23095951 ttatatttgttttattatgtcggtggtagcagacacgccattcttgatgatgtcataggtattgg 23095887  T

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Target: chr6; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 193 - 277
Target Start/End: Complemental strand, 23096260 - 23096176
Alignment:
Q  193 agtgatctttattacatttggtattgtagagatagagaaaagatgaagaaataggaaaggactagggcatcaaggccacattttt 277  Q
    ||||||| |||||||| ||||| ||| |||||| |||||||| |||||||||||||||||  | |||||||||||| ||||||||    
T  23096260 agtgatcattattacacttggttttgaagagatggagaaaaggtgaagaaataggaaaggggtggggcatcaaggctacattttt 23096176  T

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Target: scaffold0295 (Bit Score: 47; Significance: 2e-17; HSPs: 1)
Name: scaffold0295
Description:

Target: scaffold0295; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 183 - 277
Target Start/End: Original strand, 16257 - 16351
Alignment:
Q  183 atccttacctagtgatctttattacatttggtattgtagagatagagaaaagatgaagaaataggaaaggactagggcatcaaggccacattttt 277  Q
    ||||||| | ||||||| |||||||| ||||| ||| ||||| ||||||||| ||||||||||| |||||| | | |||||||||||||||||||    
T  16257 atccttagcaagtgatcattattacacttggttttgaagagacagagaaaaggtgaagaaatagaaaaggagttgagcatcaaggccacattttt 16351  T

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Target: scaffold0039 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 418 - 581
Target Start/End: Original strand, 83284 - 83448
Alignment:
Q  418 agaaaactttcatgttctttcttctccatttcaggaaaggtatatagtgctcttctctcaaca---tgtaaatatttttgtctgggttacatcttttt-t 513  Q
    |||||||||| |||||||||||||||   ||||| ||||||| ||| || ||||||||||| |   ||||| |||||||||  ||||||||| ||||| |    
T  83284 agaaaacttttatgttctttcttctc---ttcagaaaaggtagatattgttcttctctcaataagatgtaagtatttttgttcgggttacatttttttct 83380  T
Q  514 ctgttcttatttgttttatta-gtccgtggtagcagactcaccattcttgaagaggtcaaggtattgga 581  Q
    || ||||||||||  | |||| |||| ||||||||||| |||||||| ||| ||||||||| |||||||    
T  83381 ctattcttatttggct-attatgtccatggtagcagacacaccattcatgatgaggtcaagatattgga 83448  T

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Target: chr2 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 194 - 253
Target Start/End: Complemental strand, 24867524 - 24867465
Alignment:
Q  194 gtgatctttattacatttggtattgtagagatagagaaaagatgaagaaataggaaagga 253  Q
    ||||| ||||||| | ||||| ||||||||| || ||||||| |||||||||||||||||    
T  24867524 gtgatttttattagacttggttttgtagagacagtgaaaagaagaagaaataggaaagga 24867465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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