View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19277_high_10 (Length: 315)
Name: NF19277_high_10
Description: NF19277
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19277_high_10 |
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Alignment Details
Target: chr4 (Bit Score: 272; Significance: 1e-152; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 272; E-Value: 1e-152
Query Start/End: Original strand, 7 - 298
Target Start/End: Complemental strand, 17814767 - 17814476
Alignment:
| Q |
7 |
aaatcaaatagcaagctgtacttgtatctacaccacgcataaaacaacttgtaaggattctatgaagagcttggagaatatcaacttttcaatggtcaat |
106 |
Q |
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| T |
17814767 |
aaatcaaatagcaagctgtacttgtatctacaccacgcataaaacaacctgtaaggattctatgaagaccttggagaatatcaacttttcaatggtcaat |
17814668 |
T |
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| Q |
107 |
ggaaattacctccgtaattgaatcaaaagttccctaatttcagacaacttactcaacaagttaccatccctttgaaagataatcaagacaaactattgcg |
206 |
Q |
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| T |
17814667 |
gaaaattacctccgtaattgaatcaaaagttccctaatttcagacaacttactcaacaagttaccatccctttgaaatataatcaagacaaactattgcg |
17814568 |
T |
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| Q |
207 |
aacacttctttgacttaatcaagacaatatggtttgcaagaaaccaagcaagatttaacaacaaaggagtgtcctggaagtcagctatgtct |
298 |
Q |
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| T |
17814567 |
aacacttctttgacttaatcaagacaatatggtttgcaagaaaccaagcaagatttaacaacaaaggagtgtcgtggaagtcagctatgtct |
17814476 |
T |
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