View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19277_high_30 (Length: 212)
Name: NF19277_high_30
Description: NF19277
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19277_high_30 |
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Alignment Details
Target: chr8 (Bit Score: 179; Significance: 9e-97; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 179; E-Value: 9e-97
Query Start/End: Original strand, 7 - 189
Target Start/End: Complemental strand, 11327413 - 11327231
Alignment:
| Q |
7 |
aagaatattaaaccatttgaatttcagagtttgggttttgaagattggaatttgattactactagtacgatttttatccaaatgaattgcataatttttt |
106 |
Q |
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| T |
11327413 |
aagaatattaaaccatttgaatttcagagtttgggttttgaagattggaatttgagtactactagtacgatttttatccaaatgaattgcataatttttt |
11327314 |
T |
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| Q |
107 |
ggaaagtaacaaatccagattctttttaagtttcttcatctggcttatttttgtctatcacattattcatcttatctccctgc |
189 |
Q |
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| T |
11327313 |
ggaaagtaacaaatccagattctttttaagtttcttcatctggcttatttttgtctatcacattattcatcttatctccctgc |
11327231 |
T |
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