View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19277_low_25 (Length: 246)

Name: NF19277_low_25
Description: NF19277
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19277_low_25
NF19277_low_25
[»] chr4 (75 HSPs)
chr4 (126-232)||(20225007-20225113)
chr4 (126-225)||(29207902-29208001)
chr4 (126-224)||(11054152-11054250)
chr4 (126-232)||(47528534-47528640)
chr4 (126-232)||(48598829-48598935)
chr4 (126-231)||(9832317-9832422)
chr4 (126-211)||(16408605-16408692)
chr4 (126-211)||(20225120-20225207)
chr4 (126-211)||(30639425-30639510)
chr4 (126-232)||(8473624-8473732)
chr4 (126-210)||(25629096-25629180)
chr4 (124-232)||(39077798-39077906)
chr4 (126-232)||(5648282-5648389)
chr4 (126-232)||(6430630-6430737)
chr4 (126-193)||(38786673-38786740)
chr4 (126-211)||(20639662-20639748)
chr4 (126-211)||(47444003-47444088)
chr4 (126-211)||(23501833-23501920)
chr4 (126-210)||(21647011-21647097)
chr4 (126-233)||(16911584-16911695)
chr4 (126-211)||(13256403-13256490)
chr4 (126-211)||(20405133-20405220)
chr4 (126-231)||(54175088-54175196)
chr4 (124-232)||(9987836-9987946)
chr4 (126-232)||(40915852-40915959)
chr4 (126-232)||(5306664-5306775)
chr4 (134-211)||(30690188-30690265)
chr4 (132-208)||(51865048-51865124)
chr4 (144-211)||(17043416-17043483)
chr4 (126-211)||(7909284-7909370)
chr4 (126-232)||(10277761-10277867)
chr4 (126-183)||(32484307-32484364)
chr4 (126-211)||(35567216-35567301)
chr4 (144-232)||(49796821-49796910)
chr4 (144-200)||(25463179-25463235)
chr4 (126-211)||(44363134-44363221)
chr4 (135-208)||(20908649-20908723)
chr4 (124-186)||(28494222-28494284)
chr4 (126-201)||(30352584-30352661)
chr4 (126-184)||(38755912-38755970)
chr4 (127-207)||(21489137-21489218)
chr4 (126-196)||(33836491-33836563)
chr4 (129-211)||(48327770-48327854)
chr4 (126-186)||(11394923-11394983)
chr4 (126-186)||(11404650-11404710)
chr4 (138-210)||(14983881-14983953)
chr4 (132-211)||(19027894-19027973)
chr4 (130-193)||(32478800-32478862)
chr4 (126-183)||(40553941-40553998)
chr4 (160-213)||(47441568-47441621)
chr4 (126-211)||(55766470-55766555)
chr4 (134-210)||(12711461-12711537)
chr4 (138-232)||(30581481-30581579)
chr4 (161-232)||(41018833-41018905)
chr4 (133-232)||(30496333-30496432)
chr4 (136-232)||(37494874-37494972)
chr4 (126-173)||(56322984-56323031)
chr4 (126-184)||(25388249-25388307)
chr4 (126-196)||(54967081-54967150)
chr4 (144-208)||(3580862-3580926)
chr4 (126-182)||(19027986-19028042)
chr4 (126-201)||(36816388-36816464)
chr4 (144-211)||(39029082-39029150)
chr4 (133-206)||(54730301-54730376)
chr4 (126-172)||(35532077-35532123)
chr4 (144-197)||(49938615-49938669)
chr4 (126-211)||(2813171-2813259)
chr4 (126-210)||(7038099-7038183)
chr4 (145-194)||(7385499-7385548)
chr4 (126-183)||(44718641-44718698)
chr4 (144-185)||(47482872-47482913)
chr4 (134-211)||(55830733-55830810)
chr4 (163-200)||(35894502-35894540)
chr4 (126-184)||(50555660-50555718)
chr4 (169-210)||(9037777-9037818)
[»] chr1 (76 HSPs)
chr1 (1-122)||(646742-646863)
chr1 (126-232)||(34725102-34725208)
chr1 (126-232)||(35253191-35253297)
chr1 (126-233)||(38478286-38478393)
chr1 (126-225)||(19414492-19414591)
chr1 (126-211)||(4349707-4349792)
chr1 (126-211)||(46247957-46248042)
chr1 (124-224)||(45812539-45812639)
chr1 (126-232)||(12126841-12126947)
chr1 (126-211)||(30395730-30395817)
chr1 (129-232)||(14617084-14617189)
chr1 (134-224)||(47214565-47214655)
chr1 (126-211)||(10378739-10378824)
chr1 (126-208)||(20004094-20004178)
chr1 (126-232)||(46991850-46991958)
chr1 (126-232)||(31382218-31382325)
chr1 (126-201)||(45402175-45402250)
chr1 (129-232)||(32632564-32632668)
chr1 (144-211)||(15505633-15505700)
chr1 (124-210)||(6925170-6925256)
chr1 (144-233)||(11596558-11596648)
chr1 (126-211)||(18944712-18944800)
chr1 (127-211)||(23768325-23768409)
chr1 (126-211)||(35005192-35005279)
chr1 (126-201)||(27474359-27474434)
chr1 (126-185)||(50606498-50606557)
chr1 (126-200)||(23796545-23796619)
chr1 (126-200)||(10668305-10668381)
chr1 (129-211)||(18741964-18742048)
chr1 (126-211)||(41319810-41319895)
chr1 (126-206)||(1517315-1517395)
chr1 (143-232)||(25468284-25468375)
chr1 (126-211)||(27201716-27201803)
chr1 (127-189)||(4587568-4587630)
chr1 (126-211)||(6983815-6983900)
chr1 (126-211)||(43768208-43768293)
chr1 (126-211)||(42304211-42304298)
chr1 (144-211)||(18724567-18724634)
chr1 (131-208)||(44485119-44485195)
chr1 (134-197)||(19701653-19701717)
chr1 (126-211)||(19932757-19932844)
chr1 (146-210)||(20036291-20036355)
chr1 (144-208)||(20169111-20169175)
chr1 (132-210)||(2435796-2435875)
chr1 (126-201)||(20999854-20999929)
chr1 (129-211)||(31442396-31442479)
chr1 (131-210)||(34148969-34149048)
chr1 (126-208)||(8197115-8197197)
chr1 (160-210)||(21910687-21910737)
chr1 (134-207)||(45264411-45264485)
chr1 (126-206)||(35019304-35019383)
chr1 (131-211)||(35117774-35117857)
chr1 (176-211)||(4430080-4430115)
chr1 (129-200)||(9939541-9939615)
chr1 (131-185)||(30555210-30555264)
chr1 (134-199)||(4249455-4249520)
chr1 (134-199)||(4249779-4249844)
chr1 (134-199)||(4250103-4250168)
chr1 (126-211)||(15511152-15511240)
chr1 (127-172)||(19386581-19386626)
chr1 (137-201)||(4430014-4430078)
chr1 (138-213)||(6358188-6358264)
chr1 (144-192)||(30682900-30682948)
chr1 (135-187)||(33594144-33594196)
chr1 (160-195)||(22930107-22930142)
chr1 (177-233)||(34679274-34679332)
chr1 (76-106)||(684203-684233)
chr1 (134-232)||(22324939-22325039)
chr1 (131-197)||(23371206-23371271)
chr1 (134-200)||(28894570-28894636)
chr1 (126-232)||(39214962-39215071)
chr1 (174-211)||(46859135-46859173)
chr1 (126-211)||(50812009-50812094)
chr1 (145-210)||(20982773-20982838)
chr1 (134-201)||(7074595-7074663)
chr1 (160-211)||(43207564-43207616)
[»] scaffold0015 (1 HSPs)
scaffold0015 (126-232)||(48638-48744)
[»] chr7 (58 HSPs)
chr7 (126-232)||(21172013-21172119)
chr7 (126-232)||(48735126-48735232)
chr7 (126-232)||(32758284-32758390)
chr7 (126-232)||(42391104-42391210)
chr7 (126-232)||(10693077-10693183)
chr7 (126-232)||(31591113-31591219)
chr7 (126-232)||(11617592-11617700)
chr7 (126-211)||(42805570-42805657)
chr7 (126-211)||(47716505-47716592)
chr7 (126-208)||(7879687-7879769)
chr7 (126-208)||(42798718-42798800)
chr7 (126-210)||(11741840-11741924)
chr7 (129-211)||(2541026-2541108)
chr7 (129-211)||(35334823-35334905)
chr7 (126-224)||(42476904-42477002)
chr7 (124-232)||(33871912-33872021)
chr7 (126-210)||(18512457-18512541)
chr7 (126-210)||(19426894-19426977)
chr7 (126-201)||(27889320-27889395)
chr7 (126-211)||(27629680-27629765)
chr7 (126-211)||(34626212-34626297)
chr7 (132-232)||(2662946-2663045)
chr7 (126-210)||(19265861-19265944)
chr7 (130-232)||(38604550-38604654)
chr7 (124-200)||(47077857-47077933)
chr7 (131-205)||(21566487-21566562)
chr7 (126-209)||(40463924-40464007)
chr7 (151-232)||(46354217-46354302)
chr7 (126-211)||(18747533-18747618)
chr7 (144-211)||(19266496-19266563)
chr7 (129-211)||(22698974-22699059)
chr7 (126-200)||(35787273-35787347)
chr7 (126-211)||(23419678-23419763)
chr7 (131-208)||(28362155-28362231)
chr7 (146-232)||(48123508-48123596)
chr7 (160-211)||(14099044-14099095)
chr7 (160-211)||(14409061-14409112)
chr7 (126-207)||(29907469-29907549)
chr7 (126-196)||(38262200-38262270)
chr7 (144-209)||(13805149-13805214)
chr7 (126-207)||(43557522-43557606)
chr7 (124-208)||(1408506-1408590)
chr7 (126-233)||(16341300-16341410)
chr7 (133-208)||(23231606-23231681)
chr7 (126-232)||(32233139-32233246)
chr7 (147-211)||(33500559-33500625)
chr7 (126-211)||(39093443-39093529)
chr7 (126-201)||(45018927-45019006)
chr7 (166-210)||(8148989-8149033)
chr7 (144-211)||(28078154-28078221)
chr7 (132-201)||(36267827-36267897)
chr7 (134-201)||(39123949-39124018)
chr7 (133-208)||(13792161-13792237)
chr7 (126-197)||(23618981-23619052)
chr7 (126-200)||(23065929-23066003)
chr7 (126-200)||(3469179-3469255)
chr7 (135-196)||(21139761-21139822)
chr7 (127-208)||(25198775-25198856)
[»] chr6 (37 HSPs)
chr6 (126-232)||(1354761-1354867)
chr6 (126-232)||(1346987-1347093)
chr6 (126-232)||(26097183-26097289)
chr6 (126-232)||(25557748-25557854)
chr6 (126-211)||(29355859-29355946)
chr6 (126-200)||(12892064-12892140)
chr6 (126-211)||(12221918-12222006)
chr6 (126-200)||(23930131-23930205)
chr6 (132-225)||(28007658-28007750)
chr6 (139-208)||(32579474-32579543)
chr6 (126-232)||(2166414-2166524)
chr6 (126-232)||(2178047-2178157)
chr6 (126-194)||(13267788-13267856)
chr6 (129-208)||(3815084-3815163)
chr6 (126-194)||(14975094-14975164)
chr6 (126-184)||(6808468-6808526)
chr6 (126-232)||(9161146-9161255)
chr6 (126-201)||(12885967-12886044)
chr6 (126-232)||(23240828-23240934)
chr6 (126-199)||(383764-383837)
chr6 (135-211)||(7947384-7947461)
chr6 (126-193)||(15866043-15866110)
chr6 (154-208)||(6024282-6024338)
chr6 (126-231)||(1941879-1941986)
chr6 (126-203)||(3116133-3116212)
chr6 (128-232)||(18277199-18277305)
chr6 (146-196)||(22967237-22967287)
chr6 (146-196)||(23821106-23821156)
chr6 (138-188)||(24097646-24097696)
chr6 (133-199)||(33138891-33138957)
chr6 (126-190)||(10734909-10734974)
chr6 (132-190)||(11395827-11395886)
chr6 (126-193)||(15865861-15865928)
chr6 (138-177)||(20906802-20906841)
chr6 (126-157)||(25997749-25997780)
chr6 (124-175)||(30786376-30786427)
chr6 (131-195)||(19340889-19340954)
[»] chr5 (55 HSPs)
chr5 (126-232)||(32703447-32703553)
chr5 (126-232)||(7368421-7368527)
chr5 (126-213)||(34154818-34154905)
chr5 (126-232)||(41014342-41014449)
chr5 (126-232)||(8169988-8170094)
chr5 (126-232)||(35710336-35710442)
chr5 (126-211)||(4619108-4619195)
chr5 (126-211)||(13801771-13801858)
chr5 (126-210)||(24448937-24449021)
chr5 (126-211)||(38879627-38879714)
chr5 (126-197)||(16957374-16957445)
chr5 (126-208)||(20135653-20135737)
chr5 (131-211)||(43574652-43574732)
chr5 (129-211)||(16880654-16880736)
chr5 (135-232)||(19142956-19143054)
chr5 (126-206)||(1565483-1565562)
chr5 (126-211)||(43334249-43334335)
chr5 (126-181)||(16028628-16028683)
chr5 (126-200)||(1405244-1405318)
chr5 (134-231)||(7097772-7097870)
chr5 (133-207)||(22861680-22861754)
chr5 (145-235)||(2838799-2838890)
chr5 (126-181)||(30877568-30877623)
chr5 (124-211)||(27328798-27328887)
chr5 (132-211)||(9794388-9794467)
chr5 (126-210)||(12006332-12006418)
chr5 (144-211)||(22600500-22600567)
chr5 (124-211)||(30006371-30006458)
chr5 (126-184)||(25622533-25622591)
chr5 (126-211)||(3771385-3771470)
chr5 (126-200)||(12575664-12575739)
chr5 (131-202)||(13774920-13774991)
chr5 (144-232)||(24323727-24323817)
chr5 (144-232)||(24360351-24360441)
chr5 (126-208)||(29334444-29334527)
chr5 (131-230)||(208936-209037)
chr5 (132-200)||(1850696-1850764)
chr5 (144-195)||(10306496-10306548)
chr5 (126-182)||(39801591-39801647)
chr5 (126-185)||(21784336-21784395)
chr5 (131-210)||(24903705-24903784)
chr5 (126-192)||(10943849-10943914)
chr5 (126-207)||(11657703-11657785)
chr5 (134-206)||(12477132-12477205)
chr5 (166-211)||(41425994-41426039)
chr5 (126-210)||(5873326-5873410)
chr5 (126-158)||(11462924-11462956)
chr5 (126-166)||(19438757-19438797)
chr5 (134-185)||(4654427-4654478)
chr5 (144-187)||(21542489-21542532)
chr5 (126-173)||(32354211-32354258)
chr5 (134-184)||(29297864-29297914)
chr5 (161-197)||(39079790-39079827)
chr5 (170-233)||(22907913-22907977)
chr5 (126-201)||(28516437-28516513)
[»] chr8 (54 HSPs)
chr8 (129-232)||(12670257-12670360)
chr8 (126-232)||(30454101-30454207)
chr8 (129-232)||(7136534-7136641)
chr8 (126-232)||(12625912-12626021)
chr8 (128-232)||(44530172-44530278)
chr8 (128-211)||(16225065-16225150)
chr8 (126-233)||(13160724-13160832)
chr8 (126-211)||(20869969-20870056)
chr8 (126-232)||(45071288-45071395)
chr8 (126-224)||(19729373-19729471)
chr8 (126-196)||(26102578-26102648)
chr8 (126-211)||(28817630-28817715)
chr8 (126-211)||(35261725-35261810)
chr8 (126-211)||(36720842-36720927)
chr8 (126-211)||(6760868-6760955)
chr8 (126-210)||(8897768-8897852)
chr8 (134-211)||(2626568-2626645)
chr8 (126-211)||(17823622-17823707)
chr8 (134-211)||(29877140-29877217)
chr8 (126-211)||(26954179-26954266)
chr8 (127-211)||(29521690-29521774)
chr8 (126-210)||(25250569-25250655)
chr8 (128-210)||(20284075-20284159)
chr8 (128-210)||(21070703-21070787)
chr8 (126-207)||(39460998-39461081)
chr8 (144-233)||(24365081-24365173)
chr8 (126-211)||(10857875-10857960)
chr8 (126-210)||(5135294-5135377)
chr8 (127-211)||(5689677-5689761)
chr8 (131-232)||(8483947-8484050)
chr8 (145-232)||(20869523-20869608)
chr8 (126-232)||(18164764-18164871)
chr8 (126-201)||(31457228-31457303)
chr8 (126-189)||(28407471-28407534)
chr8 (132-211)||(389691-389770)
chr8 (128-200)||(16013511-16013585)
chr8 (124-210)||(26457776-26457860)
chr8 (135-232)||(44781517-44781618)
chr8 (128-182)||(27507985-27508039)
chr8 (126-211)||(44742522-44742608)
chr8 (172-225)||(23286375-23286428)
chr8 (126-185)||(35107315-35107374)
chr8 (126-196)||(23000232-23000293)
chr8 (134-232)||(22598180-22598279)
chr8 (126-171)||(27468096-27468141)
chr8 (144-211)||(14017990-14018058)
chr8 (144-211)||(24245492-24245562)
chr8 (166-211)||(43942370-43942417)
chr8 (160-206)||(11000987-11001033)
chr8 (124-177)||(18595918-18595971)
chr8 (126-183)||(36486570-36486627)
chr8 (126-199)||(17250880-17250954)
chr8 (126-158)||(23286341-23286373)
chr8 (160-207)||(35105973-35106021)
[»] scaffold0168 (1 HSPs)
scaffold0168 (126-232)||(30602-30708)
[»] chr3 (64 HSPs)
chr3 (126-232)||(1217135-1217241)
chr3 (126-232)||(31592894-31593000)
chr3 (126-225)||(15797274-15797373)
chr3 (126-224)||(22122921-22123019)
chr3 (126-232)||(39203561-39203667)
chr3 (126-211)||(34771368-34771453)
chr3 (126-232)||(40272816-40272924)
chr3 (126-211)||(353353-353440)
chr3 (126-208)||(54484762-54484844)
chr3 (126-211)||(13730606-13730693)
chr3 (126-211)||(49013477-49013564)
chr3 (126-232)||(22609811-22609918)
chr3 (128-225)||(26292384-26292481)
chr3 (126-211)||(13628794-13628881)
chr3 (126-211)||(26869774-26869859)
chr3 (126-207)||(52926223-52926304)
chr3 (126-211)||(12914039-12914124)
chr3 (129-211)||(14987025-14987109)
chr3 (126-211)||(16735508-16735593)
chr3 (126-211)||(29366724-29366811)
chr3 (126-182)||(30452892-30452948)
chr3 (126-211)||(45786218-45786305)
chr3 (133-231)||(6411833-6411932)
chr3 (129-224)||(7696899-7696989)
chr3 (124-211)||(7943058-7943145)
chr3 (126-201)||(25517174-25517249)
chr3 (132-232)||(45948848-45948950)
chr3 (126-188)||(24851305-24851367)
chr3 (134-232)||(54374357-54374458)
chr3 (134-211)||(26573195-26573272)
chr3 (126-211)||(46421038-46421126)
chr3 (126-211)||(10795427-10795514)
chr3 (160-231)||(47624088-47624160)
chr3 (126-232)||(53996569-53996678)
chr3 (139-211)||(9607271-9607345)
chr3 (126-197)||(24577917-24577988)
chr3 (126-197)||(24578007-24578078)
chr3 (126-211)||(516477-516565)
chr3 (138-211)||(33926150-33926224)
chr3 (132-200)||(829452-829521)
chr3 (126-211)||(8247690-8247778)
chr3 (135-211)||(34420656-34420733)
chr3 (126-187)||(35417996-35418057)
chr3 (147-211)||(9276332-9276395)
chr3 (126-185)||(5173723-5173782)
chr3 (126-232)||(31831244-31831339)
chr3 (171-211)||(31904906-31904946)
chr3 (124-211)||(55401244-55401332)
chr3 (172-211)||(4495714-4495753)
chr3 (126-177)||(10484620-10484671)
chr3 (126-168)||(6242289-6242331)
chr3 (144-193)||(30928169-30928218)
chr3 (170-211)||(33235600-33235641)
chr3 (136-196)||(43114882-43114942)
chr3 (124-185)||(44403557-44403618)
chr3 (161-232)||(45139515-45139590)
chr3 (144-193)||(46169989-46170038)
chr3 (134-197)||(25944551-25944615)
chr3 (126-170)||(47624208-47624252)
chr3 (172-232)||(54032609-54032671)
chr3 (126-200)||(19731081-19731155)
chr3 (126-199)||(50624957-50625030)
chr3 (175-211)||(45620881-45620917)
chr3 (171-211)||(52428526-52428566)
[»] chr2 (66 HSPs)
chr2 (126-225)||(21779265-21779364)
chr2 (126-232)||(9671204-9671310)
chr2 (126-232)||(23397789-23397895)
chr2 (126-211)||(10546209-10546294)
chr2 (126-211)||(8455320-8455405)
chr2 (126-232)||(36871516-36871622)
chr2 (126-211)||(10543744-10543831)
chr2 (126-232)||(14444752-14444859)
chr2 (126-224)||(25249742-25249841)
chr2 (126-211)||(14530364-14530451)
chr2 (126-210)||(5841075-5841161)
chr2 (144-232)||(32781310-32781400)
chr2 (126-232)||(17623587-17623695)
chr2 (126-232)||(17668025-17668133)
chr2 (126-233)||(25079721-25079831)
chr2 (126-209)||(40762238-40762321)
chr2 (126-207)||(11514486-11514566)
chr2 (124-201)||(24859990-24860067)
chr2 (124-173)||(39189506-39189555)
chr2 (126-210)||(17896307-17896391)
chr2 (160-211)||(22371100-22371151)
chr2 (126-208)||(13245099-13245181)
chr2 (160-232)||(12023957-12024030)
chr2 (135-208)||(24890460-24890533)
chr2 (126-211)||(25632555-25632640)
chr2 (126-183)||(41409936-41409993)
chr2 (126-207)||(44643573-44643654)
chr2 (126-211)||(24200627-24200714)
chr2 (126-182)||(34080176-34080232)
chr2 (126-201)||(4516355-4516430)
chr2 (127-203)||(23488535-23488613)
chr2 (126-232)||(39914310-39914418)
chr2 (126-176)||(3633712-3633762)
chr2 (135-188)||(4794871-4794924)
chr2 (126-183)||(40579753-40579810)
chr2 (144-233)||(21377095-21377186)
chr2 (132-208)||(26684630-26684706)
chr2 (134-210)||(30826083-30826158)
chr2 (134-200)||(19977726-19977792)
chr2 (160-232)||(5450308-5450383)
chr2 (132-235)||(17471568-17471675)
chr2 (129-182)||(34766330-34766383)
chr2 (126-211)||(40416875-40416960)
chr2 (134-211)||(14544110-14544189)
chr2 (132-200)||(25641558-25641626)
chr2 (134-211)||(31158451-31158530)
chr2 (138-201)||(99281-99344)
chr2 (160-207)||(23145736-23145783)
chr2 (160-207)||(23557526-23557573)
chr2 (124-170)||(124916-124962)
chr2 (131-232)||(17380247-17380348)
chr2 (126-208)||(27573669-27573751)
chr2 (130-192)||(31523296-31523358)
chr2 (126-192)||(31525771-31525837)
chr2 (134-211)||(19615038-19615116)
chr2 (126-170)||(22371199-22371243)
chr2 (134-210)||(39499242-39499318)
chr2 (160-211)||(44449421-44449473)
chr2 (126-184)||(1289095-1289154)
chr2 (126-177)||(8575975-8576026)
chr2 (138-193)||(24059012-24059067)
chr2 (124-211)||(7214580-7214669)
chr2 (124-210)||(31821345-31821431)
chr2 (163-191)||(4252656-4252684)
chr2 (167-211)||(12315697-12315741)
chr2 (144-211)||(33795331-33795398)
[»] scaffold0187 (2 HSPs)
scaffold0187 (126-232)||(10054-10160)
scaffold0187 (126-232)||(20382-20488)
[»] scaffold0180 (1 HSPs)
scaffold0180 (126-209)||(24137-24220)
[»] scaffold1176 (1 HSPs)
scaffold1176 (124-231)||(1589-1696)
[»] scaffold0223 (1 HSPs)
scaffold0223 (126-232)||(11154-11260)
[»] scaffold0057 (4 HSPs)
scaffold0057 (126-232)||(46854-46962)
scaffold0057 (126-232)||(43682-43789)
scaffold0057 (126-211)||(24776-24861)
scaffold0057 (144-210)||(46729-46796)
[»] scaffold0311 (1 HSPs)
scaffold0311 (127-231)||(10834-10940)
[»] scaffold0258 (1 HSPs)
scaffold0258 (126-208)||(13028-13110)
[»] scaffold0049 (1 HSPs)
scaffold0049 (126-211)||(59023-59110)
[»] scaffold0018 (1 HSPs)
scaffold0018 (126-208)||(72871-72953)
[»] scaffold0954 (1 HSPs)
scaffold0954 (133-208)||(3593-3668)
[»] scaffold0036 (1 HSPs)
scaffold0036 (167-211)||(35062-35106)
[»] scaffold0194 (1 HSPs)
scaffold0194 (134-209)||(24696-24771)
[»] scaffold0167 (1 HSPs)
scaffold0167 (161-231)||(23623-23695)
[»] scaffold0867 (1 HSPs)
scaffold0867 (172-200)||(3719-3747)
[»] scaffold0254 (1 HSPs)
scaffold0254 (160-232)||(4180-4257)


Alignment Details
Target: chr4 (Bit Score: 91; Significance: 3e-44; HSPs: 75)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 126 - 232
Target Start/End: Complemental strand, 20225113 - 20225007
Alignment:
Q  126 ggcaacccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccatttggtgtattgtacgcagtcttaccctgatgtacacaagagg 225  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||| | |||||||||||    
T  20225113 ggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgttttacacaagagg 20225014  T
Q  226 ttgtttc 232  Q
    |||||||    
T  20225013 ttgtttc 20225007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 126 - 225
Target Start/End: Original strand, 29207902 - 29208001
Alignment:
Q  126 ggcaacccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccatttggtgtattgtacgcagtcttaccctgatgtacacaagagg 225  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||| | |||||||||||    
T  29207902 ggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgttttacacaagagg 29208001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 126 - 224
Target Start/End: Original strand, 11054152 - 11054250
Alignment:
Q  126 ggcaacccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccatttggtgtattgtacgcagtcttaccctgatgtacacaagag 224  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||| || |||||||||||||||||||||||||||||||| | ||||||||||    
T  11054152 ggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggttccgccatttggtgtattgtacgcagtcttaccctgttttacacaagag 11054250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 126 - 232
Target Start/End: Original strand, 47528534 - 47528640
Alignment:
Q  126 ggcaacccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccatttggtgtattgtacgcagtcttaccctgatgtacacaagagg 225  Q
    ||||||||||||||||||||||||| ||||| | |||||||||||||||||||||||||||||||||||||||||| ||||||||| | |||||||||||    
T  47528534 ggcaacccggtgcactagagctcccacatattcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgttttacacaagagg 47528633  T
Q  226 ttgtttc 232  Q
     ||||||    
T  47528634 ctgtttc 47528640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 126 - 232
Target Start/End: Original strand, 48598829 - 48598935
Alignment:
Q  126 ggcaacccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccatttggtgtattgtacgcagtcttaccctgatgtacacaagagg 225  Q
    |||||||||||||||||||||||| ||||||||  ||||||||||||||||||||||||||||||||||||||||| ||||||||| | |||||||||||    
T  48598829 ggcaacccggtgcactagagctccggcatatgcatggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgttttacacaagagg 48598928  T
Q  226 ttgtttc 232  Q
     ||||||    
T  48598929 ctgtttc 48598935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 126 - 231
Target Start/End: Original strand, 9832317 - 9832422
Alignment:
Q  126 ggcaacccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccatttggtgtattgtacgcagtcttaccctgatgtacacaagagg 225  Q
    |||||||||||||||||||| ||| |||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||| | |||||||||||    
T  9832317 ggcaacccggtgcactagagttcctgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgttttacacaagagg 9832416  T
Q  226 ttgttt 231  Q
     |||||    
T  9832417 ctgttt 9832422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 126 - 211
Target Start/End: Original strand, 16408605 - 16408692
Alignment:
Q  126 ggcaacccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccat--ttggtgtattgtacgcagtcttaccctg 211  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||  ||||||||||||||||||||||||||||    
T  16408605 ggcaacccggtgcactaaagctcccgcatatgcggggtccgggaaggggttccaccattattggtgtattgtacgcagtcttaccctg 16408692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 126 - 211
Target Start/End: Complemental strand, 20225207 - 20225120
Alignment:
Q  126 ggcaacccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccat--ttggtgtattgtacgcagtcttaccctg 211  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||| |||||||||    
T  20225207 ggcaacccggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctg 20225120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 126 - 211
Target Start/End: Complemental strand, 30639510 - 30639425
Alignment:
Q  126 ggcaacccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccatttggtgtattgtacgcagtcttaccctg 211  Q
    |||||||| |||||||| ||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||| |||||||||    
T  30639510 ggcaacccagtgcactaaagctcccgcatatgcagggtccgggaaggggtctcaccatttggtgtattgtacgcagccttaccctg 30639425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 126 - 232
Target Start/End: Original strand, 8473624 - 8473732
Alignment:
Q  126 ggcaacccggtgcactagagctcccgcatatgc-ggggtccggg-aaggggtcccaccatttggtgtattgtacgcagtcttaccctgatgtacacaaga 223  Q
    ||||||||||||||||| ||||||||||||||| |||||||||| |||||||||||||||||||||||||||| |||| ||||||||| |  ||||||||    
T  8473624 ggcaacccggtgcactaaagctcccgcatatgcaggggtccggggaaggggtcccaccatttggtgtattgtatgcagccttaccctgttaaacacaaga 8473723  T
Q  224 ggttgtttc 232  Q
    || ||||||    
T  8473724 ggctgtttc 8473732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 126 - 210
Target Start/End: Complemental strand, 25629180 - 25629096
Alignment:
Q  126 ggcaacccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccatttggtgtattgtacgcagtcttaccct 210  Q
    ||||||||||||||||| ||||||||||||||  |||||||||||||||||||||||||||||||||||||| ||| ||||||||    
T  25629180 ggcaacccggtgcactaaagctcccgcatatgtagggtccgggaaggggtcccaccatttggtgtattgtacacagccttaccct 25629096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 124 - 232
Target Start/End: Original strand, 39077798 - 39077906
Alignment:
Q  124 aaggcaacccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccatttggtgtattgtacgcagtcttaccctgatgtacacaaga 223  Q
    ||||||||||||||||||||||||||||||||||| |||||||| |||  ||| ||||||||||| |||||||||||  ||||||||| | |||||||||    
T  39077798 aaggcaacccggtgcactagagctcccgcatatgcagggtccggaaagatgtctcaccatttggtatattgtacgcaaccttaccctgttttacacaaga 39077897  T
Q  224 ggttgtttc 232  Q
    || ||||||    
T  39077898 ggctgtttc 39077906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 126 - 232
Target Start/End: Complemental strand, 5648389 - 5648282
Alignment:
Q  126 ggcaacccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccatttggtgtattgtacgcagtcttaccctg-atgtacacaagag 224  Q
    |||||||| |||||||  |||||||||||| || |||||||||||||||||||||||||||||||||||||||||| |||||||||  | ||||||||||    
T  5648389 ggcaacccagtgcactgaagctcccgcatacgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttttacacaagag 5648290  T
Q  225 gttgtttc 232  Q
    | ||||||    
T  5648289 gctgtttc 5648282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 126 - 232
Target Start/End: Original strand, 6430630 - 6430737
Alignment:
Q  126 ggcaacccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccatttggtgtattgtacgcagtcttaccctg-atgtacacaagag 224  Q
    ||||||||||||| ||| |||||||||||| || |||||||||||| ||||||||||||||||||||||||||||| |||||||||  | ||||||||||    
T  6430630 ggcaacccggtgcgctaaagctcccgcatacgcagggtccgggaagtggtcccaccatttggtgtattgtacgcagccttaccctgtttttacacaagag 6430729  T
Q  225 gttgtttc 232  Q
    | ||||||    
T  6430730 gctgtttc 6430737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 126 - 193
Target Start/End: Complemental strand, 38786740 - 38786673
Alignment:
Q  126 ggcaacccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccatttggtgtatt 193  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  38786740 ggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtatt 38786673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 126 - 211
Target Start/End: Original strand, 20639662 - 20639748
Alignment:
Q  126 ggcaacccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccacca-tttggtgtattgtacgcagtcttaccctg 211  Q
    ||||||||||||||||| |||||||||||| || ||||||||||||||||||||||| ||||||||||||||||||| |||||||||    
T  20639662 ggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccattttggtgtattgtacgcagccttaccctg 20639748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 126 - 211
Target Start/End: Complemental strand, 47444088 - 47444003
Alignment:
Q  126 ggcaacccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccatttggtgtattgtacgcagtcttaccctg 211  Q
    |||||||| |||||||  |||||| |||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  47444088 ggcaacccagtgcactgaagctcctgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctg 47444003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 126 - 211
Target Start/End: Complemental strand, 23501920 - 23501833
Alignment:
Q  126 ggcaacccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccat--ttggtgtattgtacgcagtcttaccctg 211  Q
    ||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||  |||||||||||||||||  |||||||||    
T  23501920 ggcaacccggtgcactaaagctcccgcatatgcagggtccgggaaggggtcccaccattattggtgtattgtacgcaaccttaccctg 23501833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 126 - 210
Target Start/End: Complemental strand, 21647097 - 21647011
Alignment:
Q  126 ggcaacccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccat--ttggtgtattgtacgcagtcttaccct 210  Q
    ||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||  ||||| |||||||||||| ||||||||    
T  21647097 ggcaacccggtgcactaaagctcccgcatatgcggggtctgggaaggggtcccaccattattggtatattgtacgcagccttaccct 21647011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 126 - 233
Target Start/End: Complemental strand, 16911695 - 16911584
Alignment:
Q  126 ggcaacccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccat--ttggtgtattgtacgcagtcttaccctga--tgtacacaa 221  Q
    |||||||||||  |||| ||||||||| || || ||||||||||||||||||||||||  |||||||||||||||||| ||||||||||  |||||||||    
T  16911695 ggcaacccggtaaactaaagctcccgcgtacgcagggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgatttgtacacaa 16911596  T
Q  222 gaggttgtttct 233  Q
    |||| |||||||    
T  16911595 gaggctgtttct 16911584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 126 - 211
Target Start/End: Original strand, 13256403 - 13256490
Alignment:
Q  126 ggcaacccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccat--ttggtgtattgtacgcagtcttaccctg 211  Q
    ||||||||||||||||| |||||||||| ||||||||| |||||||||||||||| ||  |||||||||||||||||| |||||||||    
T  13256403 ggcaacccggtgcactaaagctcccgcagatgcggggttcgggaaggggtcccactattattggtgtattgtacgcagccttaccctg 13256490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 126 - 211
Target Start/End: Complemental strand, 20405220 - 20405133
Alignment:
Q  126 ggcaacccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccat--ttggtgtattgtacgcagtcttaccctg 211  Q
    ||||||||  ||||||| ||||||||||||||||||||||||||||||||||||||||  || |||||||||||||| ||||||||||    
T  20405220 ggcaacccaatgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattagtgtattgtacgcaatcttaccctg 20405133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 126 - 231
Target Start/End: Complemental strand, 54175196 - 54175088
Alignment:
Q  126 ggcaacccggtgcactagagctcccgcatatgcggggtcc-gggaaggggtcccacca-tttggtgtattgtacgcagtcttaccctg-atgtacacaag 222  Q
    |||| |||||||||||| ||||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||| |||||||||  | ||||||||    
T  54175196 ggcagcccggtgcactaaagctcccgcatatgcagggtccggggaaggggtcccaccattttggtgtattgtacgcagccttaccctgtttttacacaag 54175097  T
Q  223 aggttgttt 231  Q
    ||| |||||    
T  54175096 aggctgttt 54175088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 124 - 232
Target Start/End: Original strand, 9987836 - 9987946
Alignment:
Q  124 aaggcaacccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccatttggtgtattgtacgcagtcttaccctgatg--tacacaa 221  Q
    |||||| ||||||||| || |||||||||||||||  ||||  |||||||||||||||||||||||||||||| |||| ||||||||  ||  |||||||    
T  9987836 aaggcagcccggtgcattaaagctcccgcatatgcaaggtcaaggaaggggtcccaccatttggtgtattgtatgcagccttaccctattgtttacacaa 9987935  T
Q  222 gaggttgtttc 232  Q
    |||||||||||    
T  9987936 gaggttgtttc 9987946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 126 - 232
Target Start/End: Complemental strand, 40915959 - 40915852
Alignment:
Q  126 ggcaacccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccatttggtgtattgtacgcagtcttaccctg-atgtacacaagag 224  Q
    ||||| ||||||||||  |||||||||||| || |||||||||||||| ||||||||||||||||||||||||||| |||||| ||  | ||||||||||    
T  40915959 ggcaatccggtgcactgaagctcccgcatacgcagggtccgggaagggctcccaccatttggtgtattgtacgcagccttaccttgtttttacacaagag 40915860  T
Q  225 gttgtttc 232  Q
    | ||||||    
T  40915859 gctgtttc 40915852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 126 - 232
Target Start/End: Original strand, 5306664 - 5306775
Alignment:
Q  126 ggcaacccggtgcactagagctcccg----catatgcggggtccgggaaggggtcccaccatttggtgtattgtacgcagtcttaccctga-tgtacaca 220  Q
    |||||||||||||| || ||||||||    |||| || |||||||||||||||||||||||||||||||||||||||||  |||||||||| | ||||||    
T  5306664 ggcaacccggtgcattaaagctcccgtccacatacgcagggtccgggaaggggtcccaccatttggtgtattgtacgcaaccttaccctgattttacaca 5306763  T
Q  221 agaggttgtttc 232  Q
    ||||| ||||||    
T  5306764 agaggctgtttc 5306775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 134 - 211
Target Start/End: Original strand, 30690188 - 30690265
Alignment:
Q  134 ggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccatttggtgtattgtacgcagtcttaccctg 211  Q
    ||||||||| |||||||||||| || ||||||||||||||||||||||| ||||||||||||| |||| |||||||||    
T  30690188 ggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccaattggtgtattgtatgcagccttaccctg 30690265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 132 - 208
Target Start/End: Original strand, 51865048 - 51865124
Alignment:
Q  132 ccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccatttggtgtattgtacgcagtcttacc 208  Q
    |||||||| || |||||||||||| || ||||||||||||||| |||||||||||||||||||||||||| ||||||    
T  51865048 ccggtgcaataaagctcccgcatacgcagggtccgggaaggggccccaccatttggtgtattgtacgcagccttacc 51865124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 144 - 211
Target Start/End: Original strand, 17043416 - 17043483
Alignment:
Q  144 agctcccgcatatgcggggtccgggaaggggtcccaccatttggtgtattgtacgcagtcttaccctg 211  Q
    |||||| |||||||| ||||| |||||||||||||||||||||||||||||||||||| |||||||||    
T  17043416 agctccagcatatgcagggtctgggaaggggtcccaccatttggtgtattgtacgcagccttaccctg 17043483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 126 - 211
Target Start/End: Original strand, 7909284 - 7909370
Alignment:
Q  126 ggcaacccggtgcactagagctccc-gcatatgcggggtccgggaaggggtcccaccatttggtgtattgtacgcagtcttaccctg 211  Q
    ||||||||| ||||||| ||||||| ||||| || |||| ||||||||||||||||||||||||||||||||||||  |||||||||    
T  7909284 ggcaacccgatgcactaaagctccccgcatacgcagggttcgggaaggggtcccaccatttggtgtattgtacgcaaccttaccctg 7909370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 126 - 232
Target Start/End: Original strand, 10277761 - 10277867
Alignment:
Q  126 ggcaacccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccatttggtgtattgtacgcagtcttaccctgatgtacacaagagg 225  Q
    ||||| ||||| ||||||| ||||||||||||| ||||| ||||||||||  |||||||||||||||||||||||| |||| |||  | || ||||||||    
T  10277761 ggcaatccggttcactagaactcccgcatatgcagggtctgggaaggggtttcaccatttggtgtattgtacgcagccttatcctattttatacaagagg 10277860  T
Q  226 ttgtttc 232  Q
     ||||||    
T  10277861 ctgtttc 10277867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 126 - 183
Target Start/End: Complemental strand, 32484364 - 32484307
Alignment:
Q  126 ggcaacccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccat 183  Q
    ||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||    
T  32484364 ggcaacccggtgcactaaagctcccgcatatgcagggtccgggaaggggtcccaccat 32484307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 126 - 211
Target Start/End: Complemental strand, 35567301 - 35567216
Alignment:
Q  126 ggcaacccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccatttggtgtattgtacgcagtcttaccctg 211  Q
    |||| |||||||||||| |||||||||| | || |||| |||||||||||||||||||||||||| |||||| ||| |||||||||    
T  35567301 ggcagcccggtgcactaaagctcccgcagacgcagggttcgggaaggggtcccaccatttggtgtgttgtacacagccttaccctg 35567216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 144 - 232
Target Start/End: Complemental strand, 49796910 - 49796821
Alignment:
Q  144 agctcccgcatatgcggggtccgggaaggggtcccaccatttggtgtattgtacgcagtcttaccctgatgt-acacaagaggttgtttc 232  Q
    |||||||||||| || |||| ||||||||||||||||||||||||||||||||||||| |||||| || | | |||||||||| ||||||    
T  49796910 agctcccgcatacgcagggttcgggaaggggtcccaccatttggtgtattgtacgcagccttaccatgttttaacacaagaggctgtttc 49796821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 144 - 200
Target Start/End: Complemental strand, 25463235 - 25463179
Alignment:
Q  144 agctcccgcatatgcggggtccgggaaggggtcccaccatttggtgtattgtacgca 200  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||    
T  25463235 agctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtgttgtacgca 25463179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 126 - 211
Target Start/End: Original strand, 44363134 - 44363221
Alignment:
Q  126 ggcaacccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccacca--tttggtgtattgtacgcagtcttaccctg 211  Q
    ||||||||||||||||| |||||||||||| || |||||||||||||||||||||||  |||||||  |||||||||| | |||||||    
T  44363134 ggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccatttttggtgcgttgtacgcagccctaccctg 44363221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 135 - 208
Target Start/End: Original strand, 20908649 - 20908723
Alignment:
Q  135 gtgcactagagctcccgcatatgcggggtccgggaaggggtcccacca-tttggtgtattgtacgcagtcttacc 208  Q
    |||||||| |||||||||||| || |||| |||||||||||||||||| ||||||||||||||||||| ||||||    
T  20908649 gtgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattttggtgtattgtacgcagccttacc 20908723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 124 - 186
Target Start/End: Complemental strand, 28494284 - 28494222
Alignment:
Q  124 aaggcaacccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccatttg 186  Q
    |||||| |||||||||||||||||||||||||||| || || |||||||||||||||||||||    
T  28494284 aaggcagcccggtgcactagagctcccgcatatgcaggatctgggaaggggtcccaccatttg 28494222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 126 - 201
Target Start/End: Original strand, 30352584 - 30352661
Alignment:
Q  126 ggcaacccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccacca--tttggtgtattgtacgcag 201  Q
    |||||| |||||||||| |||||||||||| || ||||||| |||||||||||||||  |||||||||||||||||||    
T  30352584 ggcaacacggtgcactaaagctcccgcatacgcagggtccgagaaggggtcccaccatttttggtgtattgtacgcag 30352661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 126 - 184
Target Start/End: Original strand, 38755912 - 38755970
Alignment:
Q  126 ggcaacccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccatt 184  Q
    ||||||||||||||||| |||||||||||| || |||||||||||||||||||||||||    
T  38755912 ggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccatt 38755970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 127 - 207
Target Start/End: Complemental strand, 21489218 - 21489137
Alignment:
Q  127 gcaacccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccacca-tttggtgtattgtacgcagtcttac 207  Q
    ||||||| |||||| | |||||||||||| || |||| |||||||||||||||||| ||||||| |||||||||||||||||    
T  21489218 gcaacccagtgcacgaaagctcccgcatacgcagggttcgggaaggggtcccaccattttggtgcattgtacgcagtcttac 21489137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 126 - 196
Target Start/End: Original strand, 33836491 - 33836563
Alignment:
Q  126 ggcaacccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccat--ttggtgtattgta 196  Q
    ||||||||| ||||||| |||||||||||| || ||||||||||||||||||||||||  |||||||||||||    
T  33836491 ggcaacccgttgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccattattggtgtattgta 33836563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 129 - 211
Target Start/End: Original strand, 48327770 - 48327854
Alignment:
Q  129 aacccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccat--ttggtgtattgtacgcagtcttaccctg 211  Q
    |||||||||||||| | || ||||||||| ||||| ||||||| |||||||||||  ||||||||||||| ||||||||||||||    
T  48327770 aacccggtgcactaaaacttccgcatatgtggggttcgggaagaggtcccaccattattggtgtattgtatgcagtcttaccctg 48327854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 126 - 186
Target Start/End: Complemental strand, 11394983 - 11394923
Alignment:
Q  126 ggcaacccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccatttg 186  Q
    ||||||||||||||||| |||||||||||| || |||||||| ||||||||||||||||||    
T  11394983 ggcaacccggtgcactaaagctcccgcatacgcagggtccggaaaggggtcccaccatttg 11394923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 126 - 186
Target Start/End: Complemental strand, 11404710 - 11404650
Alignment:
Q  126 ggcaacccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccatttg 186  Q
    ||||||||||||||||| |||||||||||| || |||||||| ||||||||||||||||||    
T  11404710 ggcaacccggtgcactaaagctcccgcatacgcagggtccggaaaggggtcccaccatttg 11404650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 138 - 210
Target Start/End: Complemental strand, 14983953 - 14983881
Alignment:
Q  138 cactagagctcccgcatatgcggggtccgggaaggggtcccaccatttggtgtattgtacgcagtcttaccct 210  Q
    ||||| |||||||||||| || |||||||||||||||||||||||||| |||||||||| |||  ||||||||    
T  14983953 cactaaagctcccgcatacgcagggtccgggaaggggtcccaccatttagtgtattgtaggcaaccttaccct 14983881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 132 - 211
Target Start/End: Complemental strand, 19027973 - 19027894
Alignment:
Q  132 ccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccatttggtgtattgtacgcagtcttaccctg 211  Q
    ||||||||||| ||||||| |||| || | ||| || |||||||||||||| |||||||||||||||||| |||||||||    
T  19027973 ccggtgcactaaagctcccacatacgcagagtctggaaaggggtcccaccaattggtgtattgtacgcagccttaccctg 19027894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 130 - 193
Target Start/End: Original strand, 32478800 - 32478862
Alignment:
Q  130 acccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccatttggtgtatt 193  Q
    ||||||||||| | |||||||||||| || ||||||||||||||||||||||||||||||||||    
T  32478800 acccggtgcacaa-agctcccgcatacgctgggtccgggaaggggtcccaccatttggtgtatt 32478862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 126 - 183
Target Start/End: Original strand, 40553941 - 40553998
Alignment:
Q  126 ggcaacccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccat 183  Q
    ||||||||||||||||| |||||||||||| || ||||||||||||||||| ||||||    
T  40553941 ggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcacaccat 40553998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 160 - 213
Target Start/End: Original strand, 47441568 - 47441621
Alignment:
Q  160 gggtccgggaaggggtcccaccatttggtgtattgtacgcagtcttaccctgat 213  Q
    |||||||||||||||||| ||||||||||||||||||| ||| |||||||||||    
T  47441568 gggtccgggaaggggtccaaccatttggtgtattgtacacagccttaccctgat 47441621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 126 - 211
Target Start/End: Original strand, 55766470 - 55766555
Alignment:
Q  126 ggcaacccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccatttggtgtattgtacgcagtcttaccctg 211  Q
    |||| |||||||||||| ||||| |||||| ||  ||||||||| ||||| ||||||||  ||||||||||||||| |||||||||    
T  55766470 ggcatcccggtgcactaaagctctcgcatacgcaaggtccgggatggggttccaccattcagtgtattgtacgcagccttaccctg 55766555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 134 - 210
Target Start/End: Original strand, 12711461 - 12711537
Alignment:
Q  134 ggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccatttggtgtattgtacgcagtcttaccct 210  Q
    ||||||||| || | ||||||| ||  |||| | ||||||||||| |||||||||||||||||||||||||||||||    
T  12711461 ggtgcactaaagtttccgcatacgctaggtctgagaaggggtcccgccatttggtgtattgtacgcagtcttaccct 12711537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 138 - 232
Target Start/End: Original strand, 30581481 - 30581579
Alignment:
Q  138 cactagagctcccgcatatgcggggtccgggaaggggtcccacca-tttggtgtattgtacgcagtcttaccctg---atgtacacaagaggttgtttc 232  Q
    ||||| ||||||  ||||||| ||||||||||||||||||||||| ||||||||||||||| ||  |||||||||    | ||||||||||||||||||    
T  30581481 cactaaagctcctacatatgcagggtccgggaaggggtcccaccattttggtgtattgtacacacccttaccctgtttttttacacaagaggttgtttc 30581579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 161 - 232
Target Start/End: Original strand, 41018833 - 41018905
Alignment:
Q  161 ggtccgggaaggggtcccaccatttggtgtattgtacgcagtcttaccctga-tgtacacaagaggttgtttc 232  Q
    |||| ||||||||||||||| ||||||||||||||||| || |||||||| | | ||||||||||||||||||    
T  41018833 ggtctgggaaggggtcccactatttggtgtattgtacgtagccttaccctaattttacacaagaggttgtttc 41018905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 133 - 232
Target Start/End: Original strand, 30496333 - 30496432
Alignment:
Q  133 cggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccatttggtgtattgtacgcagtcttaccctgatgtacacaagaggttgtttc 232  Q
    |||||||||| ||||||  |||| ||  |||||||||||| ||||| ||||||||||||||||| |||| |||||||   | ||||||||||| ||||||    
T  30496333 cggtgcactaaagctccatcataagcacggtccgggaaggagtccccccatttggtgtattgtatgcagccttacccgtgtttacacaagaggctgtttc 30496432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 136 - 232
Target Start/End: Complemental strand, 37494972 - 37494874
Alignment:
Q  136 tgcactagagctcccgcatatgcggggtccgggaaggggtcccaccatttggtgtattgtacgcagtcttaccctg--atgtacacaagaggttgtttc 232  Q
    ||||||| |||||| ||||| || |||||| | |||||||||||||||||||| ||||||| |||  |||||||||   | ||||||||||||||||||    
T  37494972 tgcactaaagctcctgcatacgcagggtcccgaaaggggtcccaccatttggtatattgtatgcaaccttaccctgttttttacacaagaggttgtttc 37494874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 126 - 173
Target Start/End: Complemental strand, 56323031 - 56322984
Alignment:
Q  126 ggcaacccggtgcactagagctcccgcatatgcggggtccgggaaggg 173  Q
    ||||||||||||||||| ||||||||||||| ||||||||||||||||    
T  56323031 ggcaacccggtgcactaaagctcccgcatatccggggtccgggaaggg 56322984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 126 - 184
Target Start/End: Complemental strand, 25388307 - 25388249
Alignment:
Q  126 ggcaacccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccatt 184  Q
    ||||||||||||||||| |||||  ||||| || |||||||||||||||||||||||||    
T  25388307 ggcaacccggtgcactaaagctcatgcatacgcagggtccgggaaggggtcccaccatt 25388249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 126 - 196
Target Start/End: Complemental strand, 54967150 - 54967081
Alignment:
Q  126 ggcaacccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccatttggtgtattgta 196  Q
    |||| |||||||||| | ||||||||||||||  |||| |||||||||||||||||||||||| |||||||    
T  54967150 ggcagcccggtgcacaa-agctcccgcatatgtagggtacgggaaggggtcccaccatttggtatattgta 54967081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 144 - 208
Target Start/End: Original strand, 3580862 - 3580926
Alignment:
Q  144 agctcccgcatatgcggggtccgggaaggggtcccaccatttggtgtattgtacgcagtcttacc 208  Q
    ||||||| ||||||| |||||||||||||||||| | |||||||||||||| || ||| ||||||    
T  3580862 agctcccacatatgcagggtccgggaaggggtcctagcatttggtgtattgcacacagccttacc 3580926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 126 - 182
Target Start/End: Complemental strand, 19028042 - 19027986
Alignment:
Q  126 ggcaacccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccacca 182  Q
    |||| |||||||||||| |||||||||||| | |||||||||||||| |||||||||    
T  19028042 ggcagcccggtgcactaaagctcccgcataagtggggtccgggaaggagtcccacca 19027986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 126 - 201
Target Start/End: Original strand, 36816388 - 36816464
Alignment:
Q  126 ggcaacccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccacc-atttggtgtattgtacgcag 201  Q
    ||||||||||| ||||| ||||||||||||  | |||||| |||||| ||||||||  |||||||||||||||||||    
T  36816388 ggcaacccggtacactaaagctcccgcatacacagggtccaggaaggagtcccacctttttggtgtattgtacgcag 36816464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 144 - 211
Target Start/End: Original strand, 39029082 - 39029150
Alignment:
Q  144 agctcccgcatatgcggggtccgggaaggggtcccacca-tttggtgtattgtacgcagtcttaccctg 211  Q
    ||||||||||||||| |||||||| ||| |||||||||| ||| ||||||||||| ||| |||||||||    
T  39029082 agctcccgcatatgcagggtccggaaagtggtcccaccattttcgtgtattgtacacagccttaccctg 39029150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 133 - 206
Target Start/End: Complemental strand, 54730376 - 54730301
Alignment:
Q  133 cggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccat--ttggtgtattgtacgcagtctta 206  Q
    |||||||||| |||||||||||| || |||||||||||||||| ||| |||  |||||||||| ||||||| ||||    
T  54730376 cggtgcactaaagctcccgcatacgcagggtccgggaaggggttccatcattattggtgtattatacgcagcctta 54730301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 126 - 172
Target Start/End: Complemental strand, 35532123 - 35532077
Alignment:
Q  126 ggcaacccggtgcactagagctcccgcatatgcggggtccgggaagg 172  Q
    ||||||||||||||||| |||||||||||| || |||||||||||||    
T  35532123 ggcaacccggtgcactaaagctcccgcatacgcagggtccgggaagg 35532077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 144 - 197
Target Start/End: Original strand, 49938615 - 49938669
Alignment:
Q  144 agctcccgcatatgcggggtccgggaaggggtcccacca-tttggtgtattgtac 197  Q
    ||||||||||||||| ||||  ||||||||||||||||| |||||||||||||||    
T  49938615 agctcccgcatatgcagggtatgggaaggggtcccaccattttggtgtattgtac 49938669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 126 - 211
Target Start/End: Complemental strand, 2813259 - 2813171
Alignment:
Q  126 ggcaacccggtgcact-agagctcccgcatatgcggggtccgggaaggggtcccaccatt--tggtgtattgtacgcagtcttaccctg 211  Q
    ||||| |||||||||| | |||||||||||| ||   || |||||| |||||||||||||  || ||||||||||||||||||||||||    
T  2813259 ggcaatccggtgcacttaaagctcccgcatacgcatcgttcgggaaagggtcccaccattattgatgtattgtacgcagtcttaccctg 2813171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 126 - 210
Target Start/End: Complemental strand, 7038183 - 7038099
Alignment:
Q  126 ggcaacccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccattt-ggtgtattgtacgcagtcttaccct 210  Q
    |||||||| |||||||| |||||| | ||| || ||||||||| ||| | |||||||||| ||||||||||||| |||||||||||    
T  7038183 ggcaacccagtgcactaaagctcc-gtatacgcagggtccgggtaggtgccccaccattttggtgtattgtacgaagtcttaccct 7038099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 145 - 194
Target Start/End: Original strand, 7385499 - 7385548
Alignment:
Q  145 gctcccgcatatgcggggtccgggaaggggtcccaccatttggtgtattg 194  Q
    |||||||||||  | ||||||||||| |||||||||||||||||||||||    
T  7385499 gctcccgcatacacagggtccgggaaagggtcccaccatttggtgtattg 7385548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 126 - 183
Target Start/End: Complemental strand, 44718698 - 44718641
Alignment:
Q  126 ggcaacccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccat 183  Q
    ||||||||||||  ||| |||||||||||| || ||||| ||||||||||||||||||    
T  44718698 ggcaacccggtgtgctaaagctcccgcatacgcagggtctgggaaggggtcccaccat 44718641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 144 - 185
Target Start/End: Original strand, 47482872 - 47482913
Alignment:
Q  144 agctcccgcatatgcggggtccgggaaggggtcccaccattt 185  Q
    |||||||||||| || ||||||||||||||||||||||||||    
T  47482872 agctcccgcatacgcagggtccgggaaggggtcccaccattt 47482913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 134 - 211
Target Start/End: Original strand, 55830733 - 55830810
Alignment:
Q  134 ggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccatttggtgtattgtacgcagtcttaccctg 211  Q
    ||||||||| ||||| |||||| ||  ||||||||| ||||| ||||||||  |||||||||||||||  ||||||||    
T  55830733 ggtgcactaaagctctcgcatacgcaaggtccgggatggggttccaccattcagtgtattgtacgcagcattaccctg 55830810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 163 - 200
Target Start/End: Original strand, 35894502 - 35894540
Alignment:
Q  163 tccgggaaggggtcccacca-tttggtgtattgtacgca 200  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  35894502 tccgggaaggggtcccaccattttggtgtattgtacgca 35894540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 184
Target Start/End: Original strand, 50555660 - 50555718
Alignment:
Q  126 ggcaacccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccatt 184  Q
    |||| |||||||||||| | |||| ||||| || |||||||||||||||| ||||||||    
T  50555660 ggcagcccggtgcactaaaactcctgcatacgcagggtccgggaaggggttccaccatt 50555718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 169 - 210
Target Start/End: Complemental strand, 9037818 - 9037777
Alignment:
Q  169 aaggggtcccaccatttggtgtattgtacgcagtcttaccct 210  Q
    ||||||||| |||||| ||||||||||| |||||||||||||    
T  9037818 aaggggtcctaccattcggtgtattgtatgcagtcttaccct 9037777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 89; Significance: 5e-43; HSPs: 76)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 646863 - 646742
Alignment:
Q  1 tgtaacttttaagtgacatttatgttcgcagtttcaccacaattaaaaggttctcttatatatnnnnnnntggactaaattgcaattcatgtttgtattt 100  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||       ||||||||||||||||||||||||||||||    
T  646863 tgtaactttcaagtgacatttatgttcgcagtttcaccacaattaaaaggttctcttatttataaaaaaatggactaaattgcaattcatgtttgtattt 646764  T
Q  101 atacatgaagggaggagaccat 122  Q
    ||||| ||||||||||||||||    
T  646763 atacacgaagggaggagaccat 646742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 126 - 232
Target Start/End: Original strand, 34725102 - 34725208
Alignment:
Q  126 ggcaacccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccatttggtgtattgtacgcagtcttaccctgatgtacacaagagg 225  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||| ||||||||| | |||||||||||    
T  34725102 ggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttagtgtattgtacgcagccttaccctgttttacacaagagg 34725201  T
Q  226 ttgtttc 232  Q
     ||||||    
T  34725202 ctgtttc 34725208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 126 - 232
Target Start/End: Original strand, 35253191 - 35253297
Alignment:
Q  126 ggcaacccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccatttggtgtattgtacgcagtcttaccctgatgtacacaagagg 225  Q
    ||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||| | |||||||||||    
T  35253191 ggcaatccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgttttacacaagagg 35253290  T
Q  226 ttgtttc 232  Q
     ||||||    
T  35253291 ctgtttc 35253297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 126 - 233
Target Start/End: Original strand, 38478286 - 38478393
Alignment:
Q  126 ggcaacccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccatttggtgtattgtacgcagtcttaccctgatgtacacaagagg 225  Q
    ||||||||||||||||||||||||||||||||| ||||||| |||||||| ||||||||||||||||||||||||| ||||||||| | |||||||||||    
T  38478286 ggcaacccggtgcactagagctcccgcatatgcagggtccgagaaggggttccaccatttggtgtattgtacgcagccttaccctgttttacacaagagg 38478385  T
Q  226 ttgtttct 233  Q
     |||||||    
T  38478386 ctgtttct 38478393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 126 - 225
Target Start/End: Complemental strand, 19414591 - 19414492
Alignment:
Q  126 ggcaacccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccatttggtgtattgtacgcagtcttaccctgatgtacacaagagg 225  Q
    ||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||| |||| |||| | |||| ||||||    
T  19414591 ggcaacccggtgcactagagctcccgcatatgcagggtacgggaaggggtcccaccatttggtgtattgtacgcagccttaacctgttttacataagagg 19414492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 126 - 211
Target Start/End: Complemental strand, 4349792 - 4349707
Alignment:
Q  126 ggcaacccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccatttggtgtattgtacgcagtcttaccctg 211  Q
    ||||||||||||||||| |||||||||||| || |||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  4349792 ggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctg 4349707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 126 - 211
Target Start/End: Original strand, 46247957 - 46248042
Alignment:
Q  126 ggcaacccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccatttggtgtattgtacgcagtcttaccctg 211  Q
    ||||||||||| ||||| |||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  46247957 ggcaacccggtacactaaagctcccgcatacgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagtcttaccctg 46248042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 124 - 224
Target Start/End: Original strand, 45812539 - 45812639
Alignment:
Q  124 aaggcaacccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccatttggtgtattgtacgcagtcttaccctgatgtacacaaga 223  Q
    ||||||||||||||||||||||||||||||||||| ||||  ||||||||||||||||||||||||||||||| |||| ||||||||  | |||||||||    
T  45812539 aaggcaacccggtgcactagagctcccgcatatgcagggtttgggaaggggtcccaccatttggtgtattgtatgcagccttaccctcttttacacaaga 45812638  T
Q  224 g 224  Q
    |    
T  45812639 g 45812639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 126 - 232
Target Start/End: Original strand, 12126841 - 12126947
Alignment:
Q  126 ggcaacccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccatttggtgtattgtacgcagtcttaccctgatgtacacaagagg 225  Q
    |||||| | |||||||| ||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||| ||||||||| | ||||||||| |    
T  12126841 ggcaacgcagtgcactacagctcccgcatatgcagggtccgggaaggggtcccacaatttggtgtattgtacgcagccttaccctgttttacacaagaag 12126940  T
Q  226 ttgtttc 232  Q
     ||||||    
T  12126941 ctgtttc 12126947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 126 - 211
Target Start/End: Original strand, 30395730 - 30395817
Alignment:
Q  126 ggcaacccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccat--ttggtgtattgtacgcagtcttaccctg 211  Q
    |||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||| |||||||||    
T  30395730 ggcaactcggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctg 30395817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 129 - 232
Target Start/End: Complemental strand, 14617189 - 14617084
Alignment:
Q  129 aacccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccatttggtgtattgtacgcagtcttaccctg--atgtacacaagaggt 226  Q
    |||||||||||||| ||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||  |||||| ||  || |||||||||||     
T  14617189 aacccggtgcactaaagctcccgcatatgcagggtccgggaagggatcccaccatttggtgtattgtacgcaaccttaccttgttatttacacaagaggc 14617090  T
Q  227 tgtttc 232  Q
    ||||||    
T  14617089 tgtttc 14617084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 134 - 224
Target Start/End: Complemental strand, 47214655 - 47214565
Alignment:
Q  134 ggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccatttggtgtattgtacgcagtcttaccctgatgtacacaagag 224  Q
    ||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||  ||||||||| | || |||||||    
T  47214655 ggtgcactagagctcccgcatatgcagggtctgggaaggggtcccaccatttggtgtattgtacgcaaccttaccctgttttaaacaagag 47214565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 126 - 211
Target Start/End: Original strand, 10378739 - 10378824
Alignment:
Q  126 ggcaacccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccatttggtgtattgtacgcagtcttaccctg 211  Q
    |||| |||||||||||| ||||||||||||||| ||||||  |||||||||||||||||||||||||||||||||| |||||||||    
T  10378739 ggcagcccggtgcactaaagctcccgcatatgcagggtccaagaaggggtcccaccatttggtgtattgtacgcagccttaccctg 10378824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 126 - 208
Target Start/End: Original strand, 20004094 - 20004178
Alignment:
Q  126 ggcaacccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccat--ttggtgtattgtacgcagtcttacc 208  Q
    ||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||  |||||||||||||||||| ||||||    
T  20004094 ggcaacccggtgcactaaagctcccgcatatgcggggtctgggaaggggtcccaccattattggtgtattgtacgcagccttacc 20004178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 126 - 232
Target Start/End: Complemental strand, 46991958 - 46991850
Alignment:
Q  126 ggcaacccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccatttggtgtattgtacgcagtcttaccctg--atgtacacaaga 223  Q
    ||||||||||||||||| ||||||| |||| || ||||||||||||||||||||||||| |||||||||||| ||| |||||||||   | |||||||||    
T  46991958 ggcaacccggtgcactaaagctcccacatacgcagggtccgggaaggggtcccaccattcggtgtattgtacacagccttaccctgttttttacacaaga 46991859  T
Q  224 ggttgtttc 232  Q
    |||||||||    
T  46991858 ggttgtttc 46991850  T

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Target: chr1; HSP #16
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 126 - 232
Target Start/End: Original strand, 31382218 - 31382325
Alignment:
Q  126 ggcaacccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccatttggtgtattgtacgcagtcttaccctg-atgtacacaagag 224  Q
    ||||||||||| || || ||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||| |||| ||||  | ||||||||||    
T  31382218 ggcaacccggtacagtaaagctcccgcatatgcagggtccaggaaggggtcccaccatttggtgtattgtacgcagccttatcctgtttttacacaagag 31382317  T
Q  225 gttgtttc 232  Q
    | ||||||    
T  31382318 gctgtttc 31382325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 126 - 201
Target Start/End: Complemental strand, 45402250 - 45402175
Alignment:
Q  126 ggcaacccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccatttggtgtattgtacgcag 201  Q
    ||||||||||||||||| |||||||||||| || ||||| ||||||||||||||||||||||||||||||||||||    
T  45402250 ggcaacccggtgcactaaagctcccgcatacgcagggtctgggaaggggtcccaccatttggtgtattgtacgcag 45402175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 129 - 232
Target Start/End: Original strand, 32632564 - 32632668
Alignment:
Q  129 aacccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccatttggtgtattgtacgcagtcttaccctg-atgtacacaagaggtt 227  Q
    |||| ||||||||  ||||||||||||||| ||||  |||||||||||||||||||||||||||||||||||| |||||||||  | ||||||||||| |    
T  32632564 aacctggtgcactcaagctcccgcatatgcagggtttgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttttacacaagaggct 32632663  T
Q  228 gtttc 232  Q
    |||||    
T  32632664 gtttc 32632668  T

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Target: chr1; HSP #19
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 144 - 211
Target Start/End: Complemental strand, 15505700 - 15505633
Alignment:
Q  144 agctcccgcatatgcggggtccgggaaggggtcccaccatttggtgtattgtacgcagtcttaccctg 211  Q
    |||||||||||| || |||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  15505700 agctcccgcatacgcagggttcgggaaggggtcccaccatttggtgtattgtacgcagtcttaccctg 15505633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 124 - 210
Target Start/End: Complemental strand, 6925256 - 6925170
Alignment:
Q  124 aaggcaacccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccatttggtgtattgtacgcagtcttaccct 210  Q
    |||||||| |||||||||| |||||||||||| || ||| ||||||||||||||||||||| |||||||||| ||||| ||||||||    
T  6925256 aaggcaactcggtgcactaaagctcccgcatacgcagggaccgggaaggggtcccaccattcggtgtattgtccgcagccttaccct 6925170  T

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Target: chr1; HSP #21
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 144 - 233
Target Start/End: Complemental strand, 11596648 - 11596558
Alignment:
Q  144 agctcccgcatatgcggggtccgggaaggggtcccaccatttggtgtattgtacgcagtcttaccctg-atgtacacaagaggttgtttct 233  Q
    |||||||||||| || |||||| ||||||||||||||||||||||||||| ||||||| |||||||||  | |||||||||||||||||||    
T  11596648 agctcccgcatacgcagggtccaggaaggggtcccaccatttggtgtattatacgcagccttaccctgtttttacacaagaggttgtttct 11596558  T

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Target: chr1; HSP #22
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 126 - 211
Target Start/End: Complemental strand, 18944800 - 18944712
Alignment:
Q  126 ggcaacccggtgcactaga-gctcccgcatatgcggggtccgggaaggggtcccaccat--ttggtgtattgtacgcagtcttaccctg 211  Q
    ||||||||||||||||| | ||||||||||| || ||||||||||||||||||||||||  |||||||||||||||||| |||||||||    
T  18944800 ggcaacccggtgcactaaaagctcccgcatacgcagggtccgggaaggggtcccaccattgttggtgtattgtacgcagccttaccctg 18944712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 127 - 211
Target Start/End: Original strand, 23768325 - 23768409
Alignment:
Q  127 gcaacccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccatttggtgtattgtacgcagtcttaccctg 211  Q
    |||| ||| ||||||| |||||||||||| || ||||| ||||||| |||||||||||||||||||||||||||| |||||||||    
T  23768325 gcaatccgctgcactaaagctcccgcatacgcagggtctgggaaggtgtcccaccatttggtgtattgtacgcagccttaccctg 23768409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 126 - 211
Target Start/End: Complemental strand, 35005279 - 35005192
Alignment:
Q  126 ggcaacccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccacca--tttggtgtattgtacgcagtcttaccctg 211  Q
    ||||||||||||||||| ||| |||||||| || |||||||||||||||||||||||  |||||||||||||| |||| |||||||||    
T  35005279 ggcaacccggtgcactaaagcgcccgcatacgcagggtccgggaaggggtcccaccatttttggtgtattgtatgcagccttaccctg 35005192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 126 - 201
Target Start/End: Complemental strand, 27474434 - 27474359
Alignment:
Q  126 ggcaacccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccatttggtgtattgtacgcag 201  Q
    ||||| ||||||||||| |||||||||||| || |||||||||||||||||||||||||  |||||||||||||||    
T  27474434 ggcaatccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccattcagtgtattgtacgcag 27474359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 126 - 185
Target Start/End: Complemental strand, 50606557 - 50606498
Alignment:
Q  126 ggcaacccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccattt 185  Q
    ||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||    
T  50606557 ggcaacccggtgcactaaagctcccgcatatgcagggtccgggaaggggtcccaccattt 50606498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 126 - 200
Target Start/End: Complemental strand, 23796619 - 23796545
Alignment:
Q  126 ggcaacccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccatttggtgtattgtacgca 200  Q
    |||| |||||||||||| |||||| |||||||| ||||| ||||||||||| |||||||||||||||||||||||    
T  23796619 ggcagcccggtgcactaaagctccagcatatgcagggtctgggaaggggtctcaccatttggtgtattgtacgca 23796545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 126 - 200
Target Start/End: Complemental strand, 10668381 - 10668305
Alignment:
Q  126 ggcaacccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccat--ttggtgtattgtacgca 200  Q
    ||||||||||||||||| |||||||||||| || ||| ||||||||||||||||||||  |||||||||||||||||    
T  10668381 ggcaacccggtgcactaaagctcccgcatacgcagggaccgggaaggggtcccaccattattggtgtattgtacgca 10668305  T

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Target: chr1; HSP #29
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 129 - 211
Target Start/End: Original strand, 18741964 - 18742048
Alignment:
Q  129 aacccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccacca--tttggtgtattgtacgcagtcttaccctg 211  Q
    |||||||||||||| ||||| |||||| || ||||| |||||||||||||||||  ||||||||||||||||||| |||||||||    
T  18741964 aacccggtgcactaaagctctcgcatacgcagggtctgggaaggggtcccaccatttttggtgtattgtacgcagccttaccctg 18742048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 126 - 211
Target Start/End: Original strand, 41319810 - 41319895
Alignment:
Q  126 ggcaacccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccatttggtgtattgtacgcagtcttaccctg 211  Q
    |||||||| |||||||  | ||||||||||||  |||| ||||||||||||||| ||||||||||||||||||||| |||||||||    
T  41319810 ggcaacccagtgcactgaaactcccgcatatgaagggttcgggaaggggtcccatcatttggtgtattgtacgcagccttaccctg 41319895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 126 - 206
Target Start/End: Original strand, 1517315 - 1517395
Alignment:
Q  126 ggcaacccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccatttggtgtattgtacgcagtctta 206  Q
    ||||||||||||||||| |||||| ||||| || ||||| | ||||||||||||||| |||||||||||||||||| ||||    
T  1517315 ggcaacccggtgcactaaagctcctgcatacgcagggtctgagaaggggtcccaccaattggtgtattgtacgcagcctta 1517395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 143 - 232
Target Start/End: Original strand, 25468284 - 25468375
Alignment:
Q  143 gagctcccgcatatgcggggtccgggaaggggtcccaccatttggtgtattgtacgcagtcttaccctga--tgtacacaagaggttgtttc 232  Q
    ||||||||||||| || ||||| |||||| ||||| ||||||||||||||||||||||  ||||||||||  | ||||||||||||||||||    
T  25468284 gagctcccgcatacgcagggtctgggaagaggtccaaccatttggtgtattgtacgcaaccttaccctgatttttacacaagaggttgtttc 25468375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 126 - 211
Target Start/End: Complemental strand, 27201803 - 27201716
Alignment:
Q  126 ggcaacccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccacca--tttggtgtattgtacgcagtcttaccctg 211  Q
    ||||||||  ||||||| |||||||||||| ||  ||||||||||||||||||||||  ||||||||||||||||||| |||||||||    
T  27201803 ggcaacccaatgcactaaagctcccgcatacgcaaggtccgggaaggggtcccaccatttttggtgtattgtacgcagccttaccctg 27201716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 127 - 189
Target Start/End: Original strand, 4587568 - 4587630
Alignment:
Q  127 gcaacccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccatttggtg 189  Q
    |||||||||||||||  |||||||||||| || ||||||||||||||||||||||||||||||    
T  4587568 gcaacccggtgcactgaagctcccgcataggcagggtccgggaaggggtcccaccatttggtg 4587630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 126 - 211
Target Start/End: Original strand, 6983815 - 6983900
Alignment:
Q  126 ggcaacccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccatttggtgtattgtacgcagtcttaccctg 211  Q
    |||| |||||||||| | |||||| || || || |||||||| ||||||||||||||||||||||||||||||||  |||||||||    
T  6983815 ggcagcccggtgcaccaaagctcctgcctacgcagggtccggaaaggggtcccaccatttggtgtattgtacgcatacttaccctg 6983900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 126 - 211
Target Start/End: Complemental strand, 43768293 - 43768208
Alignment:
Q  126 ggcaacccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccatttggtgtattgtacgcagtcttaccctg 211  Q
    |||| ||||||||| || |||||||| ||| || ||||| ||||||||||||||||| ||||||||||||| |||| |||||||||    
T  43768293 ggcagcccggtgcattaaagctcccgtatacgcagggtctgggaaggggtcccaccaattggtgtattgtaggcagccttaccctg 43768208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 126 - 211
Target Start/End: Original strand, 42304211 - 42304298
Alignment:
Q  126 ggcaacccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccacca--tttggtgtattgtacgcagtcttaccctg 211  Q
    ||||| ||||||||||| ||||||| |||| || |||||||||||||||||||||||  ||| ||||||||||||||  |||||||||    
T  42304211 ggcaatccggtgcactaaagctcccacatacgcagggtccgggaaggggtcccaccattttttgtgtattgtacgcaaccttaccctg 42304298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 144 - 211
Target Start/End: Original strand, 18724567 - 18724634
Alignment:
Q  144 agctcccgcatatgcggggtccgggaaggggtcccaccatttggtgtattgtacgcagtcttaccctg 211  Q
    ||||||||||||||  ||||||||||||||||||||  |||||||||||||||| ||| |||||||||    
T  18724567 agctcccgcatatgtagggtccgggaaggggtcccaagatttggtgtattgtacacagccttaccctg 18724634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 131 - 208
Target Start/End: Original strand, 44485119 - 44485195
Alignment:
Q  131 cccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccatttggtgtattgtacgcagtcttacc 208  Q
    |||||||||| | |||||||||||| |  || ||||||||||||||| ||||||||||||||||||||||| ||||||    
T  44485119 cccggtgcacaa-agctcccgcatacgtaggatccgggaaggggtccaaccatttggtgtattgtacgcagccttacc 44485195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 134 - 197
Target Start/End: Complemental strand, 19701717 - 19701653
Alignment:
Q  134 ggtgcactagagctcccgcatatgcggggtccgggaaggggtcccacca-tttggtgtattgtac 197  Q
    ||||||||| |||||||||||| || ||||||||||||||| ||||||| |||||||||||||||    
T  19701717 ggtgcactaaagctcccgcatacgcagggtccgggaaggggccccaccattttggtgtattgtac 19701653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 126 - 211
Target Start/End: Original strand, 19932757 - 19932844
Alignment:
Q  126 ggcaacccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccacca--tttggtgtattgtacgcagtcttaccctg 211  Q
    ||||||| |||||||||  | ||  ||||| || |||||||||||||||||||||||  ||||||||||||||||||| |||||||||    
T  19932757 ggcaacctggtgcactaatgatcttgcatacgcagggtccgggaaggggtcccaccatttttggtgtattgtacgcagccttaccctg 19932844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 146 - 210
Target Start/End: Complemental strand, 20036355 - 20036291
Alignment:
Q  146 ctcccgcatatgcggggtccgggaaggggtcccaccatttggtgtattgtacgcagtcttaccct 210  Q
    |||| ||||| || |||||||||||||||| |||||||||||||||||| ||||| |||||||||    
T  20036355 ctcctgcatacgcagggtccgggaaggggttccaccatttggtgtattgaacgcaatcttaccct 20036291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 144 - 208
Target Start/End: Original strand, 20169111 - 20169175
Alignment:
Q  144 agctcccgcatatgcggggtccgggaaggggtcccaccatttggtgtattgtacgcagtcttacc 208  Q
    ||||||||||||||| ||||||||||||| ||||||||  |||| ||||||||| ||||||||||    
T  20169111 agctcccgcatatgcagggtccgggaaggagtcccaccgattggggtattgtacacagtcttacc 20169175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 132 - 210
Target Start/End: Original strand, 2435796 - 2435875
Alignment:
Q  132 ccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccacca-tttggtgtattgtacgcagtcttaccct 210  Q
    ||||||||||| |||||||||||  |  |||| ||| |||||||||||||| ||||||||||||||||||| ||||||||    
T  2435796 ccggtgcactaaagctcccgcatgcggagggtacggaaaggggtcccaccattttggtgtattgtacgcaggcttaccct 2435875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 126 - 201
Target Start/End: Original strand, 20999854 - 20999929
Alignment:
Q  126 ggcaacccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccatttggtgtattgtacgcag 201  Q
    |||| |||||||||||| ||||||||| || || |||| | |||||||| |||| |||||||||||||||||||||    
T  20999854 ggcagcccggtgcactaaagctcccgcgtacgcagggtgccggaaggggccccatcatttggtgtattgtacgcag 20999929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 129 - 211
Target Start/End: Original strand, 31442396 - 31442479
Alignment:
Q  129 aacccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccacca-tttggtgtattgtacgcagtcttaccctg 211  Q
    |||||||||||| | ||||||| ||||  | | ||||||||||||||||||||| ||||||||||||||||||  |||||||||    
T  31442396 aacccggtgcaccaaagctcccacatacacagtgtccgggaaggggtcccaccattttggtgtattgtacgcatccttaccctg 31442479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 131 - 210
Target Start/End: Original strand, 34148969 - 34149048
Alignment:
Q  131 cccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccatttggtgtattgtacgcagtcttaccct 210  Q
    |||| |||||||| ||||| |||||||| |||||| |||||||||| ||||||||||| | |||||||||  ||||||||    
T  34148969 cccgttgcactagcgctcctgcatatgcagggtccaggaaggggtctcaccatttggtcttttgtacgcaaccttaccct 34149048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 126 - 208
Target Start/End: Complemental strand, 8197197 - 8197115
Alignment:
Q  126 ggcaacccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccatttggtgtattgtacgcagtcttacc 208  Q
    ||||||||||| ||||| ||||||  |||| || ||||||| |||||||||| ||||||||||||| |||||| || ||||||    
T  8197197 ggcaacccggtacactaaagctccaacatacgcagggtccgagaaggggtcctaccatttggtgtactgtacgtagccttacc 8197115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 160 - 210
Target Start/End: Original strand, 21910687 - 21910737
Alignment:
Q  160 gggtccgggaaggggtcccaccatttggtgtattgtacgcagtcttaccct 210  Q
    |||| ||||||||||||||||||||||||||||||||||||  ||||||||    
T  21910687 gggttcgggaaggggtcccaccatttggtgtattgtacgcaaccttaccct 21910737  T

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Target: chr1; HSP #50
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 134 - 207
Target Start/End: Original strand, 45264411 - 45264485
Alignment:
Q  134 ggtgcactagagctcccgcatatgcggggtccgggaaggggtcccacca-tttggtgtattgtacgcagtcttac 207  Q
    ||||||||| ||||||||||||||| ||||| | ||||||||||||||| |||||||||||| || ||| |||||    
T  45264411 ggtgcactaaagctcccgcatatgcagggtctgagaaggggtcccaccattttggtgtattgcacacagccttac 45264485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 126 - 206
Target Start/End: Complemental strand, 35019383 - 35019304
Alignment:
Q  126 ggcaacccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccatttggtgtattgtacgcagtctta 206  Q
    |||| |||||||||||| ||||| |||||| || ||||| |||| |||||||||||| ||||||||||||| |||| ||||    
T  35019383 ggcagcccggtgcactaaagctctcgcatacgcagggtctggga-ggggtcccaccaattggtgtattgtatgcagcctta 35019304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 131 - 211
Target Start/End: Original strand, 35117774 - 35117857
Alignment:
Q  131 cccggtgcactagagctcccgcat-atgcggggtccgggaaggggtcccacca--tttggtgtattgtacgcagtcttaccctg 211  Q
    |||||||||||| |||||| |||| | || |||||||||||||||||||| ||  ||||||||||||||| ||| |||||||||    
T  35117774 cccggtgcactaaagctcctgcattacgcagggtccgggaaggggtcccatcatttttggtgtattgtacacagccttaccctg 35117857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 176 - 211
Target Start/End: Original strand, 4430080 - 4430115
Alignment:
Q  176 cccaccatttggtgtattgtacgcagtcttaccctg 211  Q
    ||||||||||||||||||||||||||||||||||||    
T  4430080 cccaccatttggtgtattgtacgcagtcttaccctg 4430115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 129 - 200
Target Start/End: Complemental strand, 9939615 - 9939541
Alignment:
Q  129 aacccggtgcactagagctcccgcatatgcggggtccgggaa-ggggtcccacca--tttggtgtattgtacgca 200  Q
    |||||||||||||| |||||||||||| || ||||||| ||| ||||||||||||  |||||||||||| |||||    
T  9939615 aacccggtgcactaaagctcccgcatacgcagggtccgagaagggggtcccaccatttttggtgtattgcacgca 9939541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 131 - 185
Target Start/End: Complemental strand, 30555264 - 30555210
Alignment:
Q  131 cccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccattt 185  Q
    |||||||||||| ||||| |||||| || ||||||| ||||||||||||||||||    
T  30555264 cccggtgcactaaagctctcgcatacgcagggtccgtgaaggggtcccaccattt 30555210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 134 - 199
Target Start/End: Original strand, 4249455 - 4249520
Alignment:
Q  134 ggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccatttggtgtattgtacgc 199  Q
    |||||| || ||||||||||||  |  ||| ||||||||| |||||||||||||||||||||||||    
T  4249455 ggtgcattaaagctcccgcatacacaaggttcgggaagggatcccaccatttggtgtattgtacgc 4249520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 134 - 199
Target Start/End: Original strand, 4249779 - 4249844
Alignment:
Q  134 ggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccatttggtgtattgtacgc 199  Q
    |||||| || ||||||||||||  |  ||| ||||||||| |||||||||||||||||||||||||    
T  4249779 ggtgcattaaagctcccgcatacacaaggttcgggaagggatcccaccatttggtgtattgtacgc 4249844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 134 - 199
Target Start/End: Original strand, 4250103 - 4250168
Alignment:
Q  134 ggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccatttggtgtattgtacgc 199  Q
    |||||| || ||||||||||||  |  ||| ||||||||| |||||||||||||||||||||||||    
T  4250103 ggtgcattaaagctcccgcatacacaaggttcgggaagggatcccaccatttggtgtattgtacgc 4250168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 126 - 211
Target Start/End: Original strand, 15511152 - 15511240
Alignment:
Q  126 ggcaacccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccacca-tttggtgtattgta--cgcagtcttaccctg 211  Q
    |||| |||||||||||| ||||| | |||| || |||||| ||||||||| |||||| ||||||||||||||  ||||| |||||||||    
T  15511152 ggcagcccggtgcactaaagctcacacatacgcagggtccaggaaggggtaccaccattttggtgtattgtatccgcagccttaccctg 15511240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 127 - 172
Target Start/End: Original strand, 19386581 - 19386626
Alignment:
Q  127 gcaacccggtgcactagagctcccgcatatgcggggtccgggaagg 172  Q
    |||||| ||| ||||||||||||||||||||| |||||||||||||    
T  19386581 gcaacctggttcactagagctcccgcatatgcagggtccgggaagg 19386626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 137 - 201
Target Start/End: Original strand, 4430014 - 4430078
Alignment:
Q  137 gcactagagctcccgcatatgcggggtccgggaaggggtcccaccatttggtgtattgtacgcag 201  Q
    |||||| ||||||||||||  | || ||| | ||||||| |||||||||||||||||||||||||    
T  4430014 gcactaaagctcccgcatacacaggatccagaaaggggttccaccatttggtgtattgtacgcag 4430078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 138 - 213
Target Start/End: Complemental strand, 6358264 - 6358188
Alignment:
Q  138 cactagagctcccgcatatgcggggtccgggaaggggtcccacca-tttggtgtattgtacgcagtcttaccctgat 213  Q
    ||||| || ||| ||||| || ||||| ||||||||||||||||| |||||||| ||||||||||  ||||||||||    
T  6358264 cactaaagatcctgcatacgcagggtctgggaaggggtcccaccattttggtgttttgtacgcagctttaccctgat 6358188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 144 - 192
Target Start/End: Complemental strand, 30682948 - 30682900
Alignment:
Q  144 agctcccgcatatgcggggtccgggaaggggtcccaccatttggtgtat 192  Q
    |||||||||||| ||  |||||||||||||||||||||||||| |||||    
T  30682948 agctcccgcatacgcacggtccgggaaggggtcccaccatttgttgtat 30682900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 135 - 187
Target Start/End: Original strand, 33594144 - 33594196
Alignment:
Q  135 gtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccatttgg 187  Q
    |||||||| |||||||||||| || ||||| ||||||||||||||||| ||||    
T  33594144 gtgcactaaagctcccgcatacgcagggtctgggaaggggtcccaccaattgg 33594196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 160 - 195
Target Start/End: Original strand, 22930107 - 22930142
Alignment:
Q  160 gggtccgggaaggggtcccaccatttggtgtattgt 195  Q
    |||||| |||||||||||||||||||||||||||||    
T  22930107 gggtccaggaaggggtcccaccatttggtgtattgt 22930142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 177 - 233
Target Start/End: Original strand, 34679274 - 34679332
Alignment:
Q  177 ccaccatttggtgtattgtacgcagtcttaccctg--atgtacacaagaggttgtttct 233  Q
    |||||||||| ||||| ||||||||||||||||||   | |||||||||||||||||||    
T  34679274 ccaccatttgatgtatagtacgcagtcttaccctgttttttacacaagaggttgtttct 34679332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 76 - 106
Target Start/End: Complemental strand, 684233 - 684203
Alignment:
Q  76 taaattgcaattcatgtttgtatttatacat 106  Q
    |||||||||||||||||||||||||||||||    
T  684233 taaattgcaattcatgtttgtatttatacat 684203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 134 - 232
Target Start/End: Complemental strand, 22325039 - 22324939
Alignment:
Q  134 ggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccattt--ggtgtattgtacgcagtcttaccctg-atgtacacaagaggttgtt 230  Q
    ||||||||| |||||||||||| || ||||| |||| ||||  |||||||||  ||||||||||| |||| |||||||||  | ||||||||||| ||||    
T  22325039 ggtgcactaaagctcccgcatacgcagggtc-gggacggggctccaccatttttggtgtattgtatgcagccttaccctgtttttacacaagaggctgtt 22324941  T
Q  231 tc 232  Q
    ||    
T  22324940 tc 22324939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 197
Target Start/End: Complemental strand, 23371271 - 23371206
Alignment:
Q  131 cccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccatttggtgtattgtac 197  Q
    |||||||||||| |||| || |||| || ||||| || ||||||||||| |||||||||||||||||    
T  23371271 cccggtgcactaaagctaccacatacgcagggtctgg-aaggggtcccagcatttggtgtattgtac 23371206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 134 - 200
Target Start/End: Original strand, 28894570 - 28894636
Alignment:
Q  134 ggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccatttggtgtattgtacgca 200  Q
    ||||||||| ||||| ||||||||| |||||  |||||||||   |||||||| |||||||||||||    
T  28894570 ggtgcactaaagctctcgcatatgcagggtctaggaaggggttttaccatttgatgtattgtacgca 28894636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 232
Target Start/End: Original strand, 39214962 - 39215071
Alignment:
Q  126 ggcaacccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccacca-tttggtgtattgtacgcagtcttaccc--tgatgtacacaag 222  Q
    |||| |||||||||||| |||| || |||| || ||||  ||||||||| ||||||| |||||  |||||||||||| |||||||  |  | ||||||||    
T  39214962 ggcagcccggtgcactaaagcttccacatacgcagggtttgggaaggggacccaccattttggaatattgtacgcagccttacccagttttttacacaag 39215061  T
Q  223 aggttgtttc 232  Q
    ||||||||||    
T  39215062 aggttgtttc 39215071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 174 - 211
Target Start/End: Complemental strand, 46859173 - 46859135
Alignment:
Q  174 gtcccaccattt-ggtgtattgtacgcagtcttaccctg 211  Q
    |||||||||||| ||||||||||||||||||||||||||    
T  46859173 gtcccaccattttggtgtattgtacgcagtcttaccctg 46859135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 211
Target Start/End: Complemental strand, 50812094 - 50812009
Alignment:
Q  126 ggcaacccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccattt-ggtgtattgtacgcagtcttaccctg 211  Q
    |||| ||| ||||| || |||||||||||| || |||  ||||||||||||| ||||||| |||||||||||||||  |||||||||    
T  50812094 ggcagcccagtgcattaaagctcccgcatacgcagggcgcgggaaggggtcc-accattttggtgtattgtacgcaaccttaccctg 50812009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 145 - 210
Target Start/End: Original strand, 20982773 - 20982838
Alignment:
Q  145 gctcccgcatatgcggggtccgggaaggggtcccaccatttggtgtattgtacgcagtcttaccct 210  Q
    ||||||||||| || ||||||| |||| | |||||||||| ||||||||||  |||| ||||||||    
T  20982773 gctcccgcatacgcagggtccgagaagagatcccaccattaggtgtattgttggcagccttaccct 20982838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 201
Target Start/End: Complemental strand, 7074663 - 7074595
Alignment:
Q  134 ggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccattt-ggtgtattgtacgcag 201  Q
    ||||||||| |||||||| |||||| |||||  | ||| |||||||| |||| ||||||||||||||||    
T  7074663 ggtgcactaaagctcccggatatgcagggtctagaaagaggtcccacaattttggtgtattgtacgcag 7074595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 160 - 211
Target Start/End: Complemental strand, 43207616 - 43207564
Alignment:
Q  160 gggtccgggaaggggtcccacca-tttggtgtattgtacgcagtcttaccctg 211  Q
    ||||| |||||| |||||||||| |||||||||||||| || |||||||||||    
T  43207616 gggtctgggaagaggtcccaccaatttggtgtattgtatgccgtcttaccctg 43207564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 87; Significance: 8e-42; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 126 - 232
Target Start/End: Original strand, 48638 - 48744
Alignment:
Q  126 ggcaacccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccatttggtgtattgtacgcagtcttaccctgatgtacacaagagg 225  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||| | |||||||||||    
T  48638 ggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgttttacacaagagg 48737  T
Q  226 ttgtttc 232  Q
     ||||||    
T  48738 ctgtttc 48744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 87; Significance: 8e-42; HSPs: 58)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 126 - 232
Target Start/End: Original strand, 21172013 - 21172119
Alignment:
Q  126 ggcaacccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccatttggtgtattgtacgcagtcttaccctgatgtacacaagagg 225  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||| | |||||||||||    
T  21172013 ggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgttttacacaagagg 21172112  T
Q  226 ttgtttc 232  Q
     ||||||    
T  21172113 ctgtttc 21172119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 126 - 232
Target Start/End: Original strand, 48735126 - 48735232
Alignment:
Q  126 ggcaacccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccatttggtgtattgtacgcagtcttaccctgatgtacacaagagg 225  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||| || | |||||||||||    
T  48735126 ggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccgtgttttacacaagagg 48735225  T
Q  226 ttgtttc 232  Q
    |||||||    
T  48735226 ttgtttc 48735232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 126 - 232
Target Start/End: Complemental strand, 32758390 - 32758284
Alignment:
Q  126 ggcaacccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccatttggtgtattgtacgcagtcttaccctgatgtacacaagagg 225  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||| ||||||||| | |||||||||||    
T  32758390 ggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacacagccttaccctgttttacacaagagg 32758291  T
Q  226 ttgtttc 232  Q
     ||||||    
T  32758290 ctgtttc 32758284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 126 - 232
Target Start/End: Original strand, 42391104 - 42391210
Alignment:
Q  126 ggcaacccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccatttggtgtattgtacgcagtcttaccctgatgtacacaagagg 225  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||| | ||||||||| |    
T  42391104 ggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgttttacacaagaag 42391203  T
Q  226 ttgtttc 232  Q
     ||||||    
T  42391204 ctgtttc 42391210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 126 - 232
Target Start/End: Original strand, 10693077 - 10693183
Alignment:
Q  126 ggcaacccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccatttggtgtattgtacgcagtcttaccctgatgtacacaagagg 225  Q
    |||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||  | |||||||||||    
T  10693077 ggcaacccagtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctcttttacacaagagg 10693176  T
Q  226 ttgtttc 232  Q
     ||||||    
T  10693177 ctgtttc 10693183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 126 - 232
Target Start/End: Original strand, 31591113 - 31591219
Alignment:
Q  126 ggcaacccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccatttggtgtattgtacgcagtcttaccctgatgtacacaagagg 225  Q
    |||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||  |||||||||||||| ||||| ||| | |||||||||||    
T  31591113 ggcaacccggtgcactagagctcccgcatatgcaaggtccgggaaggggtcccaccatttattgtattgtacgcagccttactctgttttacacaagagg 31591212  T
Q  226 ttgtttc 232  Q
    |||||||    
T  31591213 ttgtttc 31591219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 126 - 232
Target Start/End: Original strand, 11617592 - 11617700
Alignment:
Q  126 ggcaacccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccatttggtgtattgtacgcagtcttaccctg--atgtacacaaga 223  Q
    ||||||||||||||||| || ||| ||||| || |||||| |||||||||||||||||||||||||||||||||||||||||||||   | |||||||||    
T  11617592 ggcaacccggtgcactaaaggtcctgcatacgcagggtccaggaaggggtcccaccatttggtgtattgtacgcagtcttaccctgttttttacacaaga 11617691  T
Q  224 ggttgtttc 232  Q
    |||||||||    
T  11617692 ggttgtttc 11617700  T

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Target: chr7; HSP #8
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 126 - 211
Target Start/End: Complemental strand, 42805657 - 42805570
Alignment:
Q  126 ggcaacccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccat--ttggtgtattgtacgcagtcttaccctg 211  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||  |||||||||||||| ||| |||||||||    
T  42805657 ggcaacccggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtattgtacacagccttaccctg 42805570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 126 - 211
Target Start/End: Complemental strand, 47716592 - 47716505
Alignment:
Q  126 ggcaacccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccat--ttggtgtattgtacgcagtcttaccctg 211  Q
    ||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||| |||||||||    
T  47716592 ggcaacccggtgcaccaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctg 47716505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 126 - 208
Target Start/End: Complemental strand, 7879769 - 7879687
Alignment:
Q  126 ggcaacccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccatttggtgtattgtacgcagtcttacc 208  Q
    ||||||||||||||||  |||||||||||| || |||||||||||||||||||||||||||||||||||||||||| ||||||    
T  7879769 ggcaacccggtgcactgaagctcccgcatacgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttacc 7879687  T

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Target: chr7; HSP #11
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 126 - 208
Target Start/End: Complemental strand, 42798800 - 42798718
Alignment:
Q  126 ggcaacccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccatttggtgtattgtacgcagtcttacc 208  Q
    ||||||||| ||||||| ||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||| ||||||    
T  42798800 ggcaacccgatgcactatagctcccgcatatgcagggtccgggaaagggtcccaccatttggtgtattgtacgcagccttacc 42798718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 126 - 210
Target Start/End: Complemental strand, 11741924 - 11741840
Alignment:
Q  126 ggcaacccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccatttggtgtattgtacgcagtcttaccct 210  Q
    ||||||||||||||||||||||||||||| ||| |  ||||||||||| ||||||||||||||||||||||||||| ||||||||    
T  11741924 ggcaacccggtgcactagagctcccgcatgtgcagaatccgggaagggatcccaccatttggtgtattgtacgcagccttaccct 11741840  T

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Target: chr7; HSP #13
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 129 - 211
Target Start/End: Original strand, 2541026 - 2541108
Alignment:
Q  129 aacccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccatttggtgtattgtacgcagtcttaccctg 211  Q
    |||||||||||||| |||||||||||| || ||| ||||||||||||||||||||||||||||| |||||||| |||||||||    
T  2541026 aacccggtgcactaaagctcccgcatacgcagggaccgggaaggggtcccaccatttggtgtatagtacgcagccttaccctg 2541108  T

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Target: chr7; HSP #14
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 129 - 211
Target Start/End: Original strand, 35334823 - 35334905
Alignment:
Q  129 aacccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccatttggtgtattgtacgcagtcttaccctg 211  Q
    |||||||||||||| |||||| ||||| || ||||||||||||||||||||||||| |||||||||||| |||||||||||||    
T  35334823 aacccggtgcactaaagctcctgcatacgcagggtccgggaaggggtcccaccattcggtgtattgtacacagtcttaccctg 35334905  T

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Target: chr7; HSP #15
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 126 - 224
Target Start/End: Complemental strand, 42477002 - 42476904
Alignment:
Q  126 ggcaacccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccatttggtgtattgtacgcagtcttaccctgatgtacacaagag 224  Q
    ||||||| ||||||||||||||||||||||||| | | |  ||||||||||||||||||||||||||||||||||| |||||| || | ||||||||||    
T  42477002 ggcaacctggtgcactagagctcccgcatatgcagagcctaggaaggggtcccaccatttggtgtattgtacgcagccttaccttgttttacacaagag 42476904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 124 - 232
Target Start/End: Original strand, 33871912 - 33872021
Alignment:
Q  124 aaggcaacccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccatttggtgtattgtacgcagtcttaccctg-atgtacacaag 222  Q
    ||||||||| ||||||||| ||||| ||||||  | ||||| |||||||||||||||||||||||||||||||||||| |||| ||||  | ||||||||    
T  33871912 aaggcaacctggtgcactaaagctctcgcatacacagggtctgggaaggggtcccaccatttggtgtattgtacgcagccttatcctgtttttacacaag 33872011  T
Q  223 aggttgtttc 232  Q
    ||||||||||    
T  33872012 aggttgtttc 33872021  T

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Target: chr7; HSP #17
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 126 - 210
Target Start/End: Original strand, 18512457 - 18512541
Alignment:
Q  126 ggcaacccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccatttggtgtattgtacgcagtcttaccct 210  Q
    |||||||| |||||| | |||||||||||| || ||||||||||||||||||||||||| |||||||||||||||| ||||||||    
T  18512457 ggcaacccagtgcaccaaagctcccgcatacgcagggtccgggaaggggtcccaccattcggtgtattgtacgcagccttaccct 18512541  T

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Target: chr7; HSP #18
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 126 - 210
Target Start/End: Original strand, 19426894 - 19426977
Alignment:
Q  126 ggcaacccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccatttggtgtattgtacgcagtcttaccct 210  Q
    ||||||||||||||||  ||||| ||||||||| ||||||| |||||| ||||||||||||||||||||||||||||||||||||    
T  19426894 ggcaacccggtgcactgaagctctcgcatatgcagggtccgagaaggg-tcccaccatttggtgtattgtacgcagtcttaccct 19426977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 126 - 201
Target Start/End: Original strand, 27889320 - 27889395
Alignment:
Q  126 ggcaacccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccatttggtgtattgtacgcag 201  Q
    |||||||||||| || | |||||||||||| || ||||||||||||||||||||||||||||||||||||||||||    
T  27889320 ggcaacccggtgtaccaaagctcccgcatacgcagggtccgggaaggggtcccaccatttggtgtattgtacgcag 27889395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 126 - 211
Target Start/End: Complemental strand, 27629765 - 27629680
Alignment:
Q  126 ggcaacccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccatttggtgtattgtacgcagtcttaccctg 211  Q
    ||||||||||||||||  |||| |||||||||| ||| |||||||||||||||||||||||||||||| ||||||  |||||||||    
T  27629765 ggcaacccggtgcactgaagctaccgcatatgcagggcccgggaaggggtcccaccatttggtgtattttacgcaaccttaccctg 27629680  T

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Target: chr7; HSP #21
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 126 - 211
Target Start/End: Original strand, 34626212 - 34626297
Alignment:
Q  126 ggcaacccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccatttggtgtattgtacgcagtcttaccctg 211  Q
    ||||||||| || |||| |||||||||||| || |||||||||||||| |||||||||||||||||||| |||||| |||||||||    
T  34626212 ggcaacccgatgaactaaagctcccgcatacgcagggtccgggaagggatcccaccatttggtgtattgaacgcagccttaccctg 34626297  T

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Target: chr7; HSP #22
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 132 - 232
Target Start/End: Original strand, 2662946 - 2663045
Alignment:
Q  132 ccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccatttggtgtattgtacgcagtcttaccctgatgtacacaagaggttgttt 231  Q
    ||||||| ||||||||||||||||||| ||||| |  ||||| ||||||||||||||||||||||||||| ||||||||  | ||||||||||| |||||    
T  2662946 ccggtgcgctagagctcccgcatatgcagggtctgaaaaggg-tcccaccatttggtgtattgtacgcagccttaccctattttacacaagaggctgttt 2663044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 126 - 210
Target Start/End: Complemental strand, 19265944 - 19265861
Alignment:
Q  126 ggcaacccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccatttggtgtattgtacgcagtcttaccct 210  Q
    |||| |||||||||||| ||||||| ||||||  || ||||||||||||||||||||||||||||||||||||||| ||||||||    
T  19265944 ggcagcccggtgcactaaagctcccacatatgtagg-tccgggaaggggtcccaccatttggtgtattgtacgcagccttaccct 19265861  T

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Target: chr7; HSP #24
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 130 - 232
Target Start/End: Complemental strand, 38604654 - 38604550
Alignment:
Q  130 acccggtgcact-agagctcccgcatatgcggggtccgggaaggggtcccaccatttggtgtattgtacgcagtcttaccctg-atgtacacaagaggtt 227  Q
    |||||||||||| | |||||||||||| || |||||||| |||||||| |||||||||||||||||||||||| |||||||||  | ||||||||||| |    
T  38604654 acccggtgcacttaaagctcccgcatacgcagggtccggaaaggggtctcaccatttggtgtattgtacgcagccttaccctgtttttacacaagaggct 38604555  T
Q  228 gtttc 232  Q
    |||||    
T  38604554 gtttc 38604550  T

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Target: chr7; HSP #25
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 124 - 200
Target Start/End: Original strand, 47077857 - 47077933
Alignment:
Q  124 aaggcaacccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccatttggtgtattgtacgca 200  Q
    ||||||| ||||||||||||||||||||||||||  ||||  |||||||||||||||||||| ||||||||||||||    
T  47077857 aaggcaatccggtgcactagagctcccgcatatgtagggtttgggaaggggtcccaccattttgtgtattgtacgca 47077933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 131 - 205
Target Start/End: Complemental strand, 21566562 - 21566487
Alignment:
Q  131 cccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccacca-tttggtgtattgtacgcagtctt 205  Q
    |||||||||||| ||||||||||||||| |||| ||||||||||||| |||| |||||||||||||||||||||||    
T  21566562 cccggtgcactaaagctcccgcatatgcagggttcgggaaggggtcctaccattttggtgtattgtacgcagtctt 21566487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 126 - 209
Target Start/End: Complemental strand, 40464007 - 40463924
Alignment:
Q  126 ggcaacccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccatttggtgtattgtacgcagtcttaccc 209  Q
    |||||| |||||||||  |||||||||||| || ||||||| |||||||||||||||||||||||||| ||||||| |||||||    
T  40464007 ggcaactcggtgcactgaagctcccgcatacgcagggtccgagaaggggtcccaccatttggtgtattatacgcagccttaccc 40463924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 151 - 232
Target Start/End: Complemental strand, 46354302 - 46354217
Alignment:
Q  151 gcatatgcggggtccgggaaggggtcccaccat--ttggtgtattgtacgcagtcttaccctg--atgtacacaagaggttgtttc 232  Q
    |||||||||||||||||||||||||||||||||  |||||||||||||||||| |||||||||   | ||||||||||||||||||    
T  46354302 gcatatgcggggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgttttttacacaagaggttgtttc 46354217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 126 - 211
Target Start/End: Complemental strand, 18747618 - 18747533
Alignment:
Q  126 ggcaacccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccatttggtgtattgtacgcagtcttaccctg 211  Q
    |||| |||||||||||| |||||||||||| || |||| | |||||||||||||||| |||||||||| ||||||| |||||||||    
T  18747618 ggcagcccggtgcactaaagctcccgcatacgcagggttcaggaaggggtcccaccaattggtgtattatacgcagccttaccctg 18747533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 144 - 211
Target Start/End: Complemental strand, 19266563 - 19266496
Alignment:
Q  144 agctcccgcatatgcggggtccgggaaggggtcccaccatttggtgtattgtacgcagtcttaccctg 211  Q
    |||||||||||| || |||||||||||||| |||||| |||||||||||||||||||| |||||||||    
T  19266563 agctcccgcatacgcagggtccgggaagggatcccacaatttggtgtattgtacgcagccttaccctg 19266496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 129 - 211
Target Start/End: Original strand, 22698974 - 22699059
Alignment:
Q  129 aacccggtgcactagagctcccgcatatgcggggtccgggaag-gggtcccaccattt--ggtgtattgtacgcagtcttaccctg 211  Q
    |||||||||||||| ||||||||||||  | |||||||||||  ||||||||||||||  ||||||||||||||||||||||||||    
T  22698974 aacccggtgcactatagctcccgcatacacagggtccgggaaaagggtcccaccatttttggtgtattgtacgcagtcttaccctg 22699059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 126 - 200
Target Start/End: Original strand, 35787273 - 35787347
Alignment:
Q  126 ggcaacccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccatttggtgtattgtacgca 200  Q
    |||||||||||||| |  |||||||||||| ||  |||||||||||||||||| |||||||||||||||||||||    
T  35787273 ggcaacccggtgcattgaagctcccgcatacgcaaggtccgggaaggggtcccgccatttggtgtattgtacgca 35787347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 126 - 211
Target Start/End: Original strand, 23419678 - 23419763
Alignment:
Q  126 ggcaacccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccatttggtgtattgtacgcagtcttaccctg 211  Q
    |||| |||| ||||||| ||| |||||| | ||  ||||  |||||||||||||||||||||||||||||||||||||||||||||    
T  23419678 ggcagcccgatgcactaaagcccccgcacacgcaaggtctaggaaggggtcccaccatttggtgtattgtacgcagtcttaccctg 23419763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 131 - 208
Target Start/End: Original strand, 28362155 - 28362231
Alignment:
Q  131 cccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccatttggtgtattgtacgcagtcttacc 208  Q
    |||||||||| | ||||||| |||||||  |||| |||||||||||||||||||||||||||||||||||| ||||||    
T  28362155 cccggtgcacaa-agctcccacatatgcaaggtctgggaaggggtcccaccatttggtgtattgtacgcagccttacc 28362231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 146 - 232
Target Start/End: Original strand, 48123508 - 48123596
Alignment:
Q  146 ctcccgcatatgcggggtccgggaaggggtcccaccatttggtgtattgtacgcagtcttaccctg--atgtacacaagaggttgtttc 232  Q
    |||||||||||||  ||||| | |||||||||||||||||||||||||||| ||||| ||||||||  || ||||||||||| ||||||    
T  48123508 ctcccgcatatgcatggtccagaaaggggtcccaccatttggtgtattgtatgcagttttaccctgttatttacacaagaggctgtttc 48123596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 160 - 211
Target Start/End: Original strand, 14099044 - 14099095
Alignment:
Q  160 gggtccgggaaggggtcccaccatttggtgtattgtacgcagtcttaccctg 211  Q
    |||| |||||||||||||||||||||||||||||||||||||||||| ||||    
T  14099044 gggttcgggaaggggtcccaccatttggtgtattgtacgcagtcttaacctg 14099095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 160 - 211
Target Start/End: Original strand, 14409061 - 14409112
Alignment:
Q  160 gggtccgggaaggggtcccaccatttggtgtattgtacgcagtcttaccctg 211  Q
    |||| |||||||||||||||||||||||||||||||||||||||||| ||||    
T  14409061 gggttcgggaaggggtcccaccatttggtgtattgtacgcagtcttaacctg 14409112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 126 - 207
Target Start/End: Complemental strand, 29907549 - 29907469
Alignment:
Q  126 ggcaacccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccacca-tttggtgtattgtacgcagtcttac 207  Q
    ||||||||||||||||| ||||||||||||  | |||||||||| |||||||||||| |||||||||||| |||||| |||||    
T  29907549 ggcaacccggtgcactaaagctcccgcata--cagggtccgggatggggtcccaccattttggtgtattgaacgcagccttac 29907469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 126 - 196
Target Start/End: Original strand, 38262200 - 38262270
Alignment:
Q  126 ggcaacccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccatttggtgtattgta 196  Q
    ||||| ||||||||||| |||||||||||| || | || ||||||||||||||| ||||||||||||||||    
T  38262200 ggcaatccggtgcactaaagctcccgcatacgcagtgttcgggaaggggtcccatcatttggtgtattgta 38262270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 144 - 209
Target Start/End: Complemental strand, 13805214 - 13805149
Alignment:
Q  144 agctcccgcatatgcggggtccgggaaggggtcccaccatttggtgtattgtacgcagtcttaccc 209  Q
    |||||||||||| || |||||| ||||| ||||||||||||||||||||||||| ||| |||||||    
T  13805214 agctcccgcatacgcagggtccaggaagtggtcccaccatttggtgtattgtacacagccttaccc 13805149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 126 - 207
Target Start/End: Complemental strand, 43557606 - 43557522
Alignment:
Q  126 ggcaacccggtgcactaga-gctcccgcatatgcggggtccgggaaggggtcccaccat--ttggtgtattgtacgcagtcttac 207  Q
    ||||||||||||||||| | ||||||||||| || | |||||||| |||||||||||||  |||||||||||||||||| |||||    
T  43557606 ggcaacccggtgcactaaaagctcccgcatacgcagagtccgggagggggtcccaccattattggtgtattgtacgcagccttac 43557522  T

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Target: chr7; HSP #42
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 124 - 208
Target Start/End: Complemental strand, 1408590 - 1408506
Alignment:
Q  124 aaggcaacccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccatttggtgtattgtacgcagtcttacc 208  Q
    ||||||| |||||| |||| || | | ||||| || ||||||||||||||||||||||||||| |||||||||| ||| ||||||    
T  1408590 aaggcaatccggtgaactaaagattctgcatacgcagggtccgggaaggggtcccaccatttgctgtattgtacacagccttacc 1408506  T

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Target: chr7; HSP #43
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 126 - 233
Target Start/End: Complemental strand, 16341410 - 16341300
Alignment:
Q  126 ggcaacccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccacca-tttggtgtattgtacgcagtcttaccctg--atgtacacaag 222  Q
    |||| |||||||||| | ||||||||||||||   ||||||||||| || ||||||| |||||||||||||||| || |||||||||   | ||||||||    
T  16341410 ggcagcccggtgcaccaaagctcccgcatatgataggtccgggaagagggcccaccattttggtgtattgtacgtagccttaccctgttttttacacaag 16341311  T
Q  223 aggttgtttct 233  Q
    ||| |||||||    
T  16341310 aggctgtttct 16341300  T

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Target: chr7; HSP #44
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 133 - 208
Target Start/End: Complemental strand, 23231681 - 23231606
Alignment:
Q  133 cggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccatttggtgtattgtacgcagtcttacc 208  Q
    |||||||||| |||| ||||||| || |||| ||||||||||||||| |||| |||||||| ||||||| ||||||    
T  23231681 cggtgcactaaagctgccgcatacgcagggttcgggaaggggtcccatcattcggtgtattatacgcagccttacc 23231606  T

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Target: chr7; HSP #45
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 126 - 232
Target Start/End: Original strand, 32233139 - 32233246
Alignment:
Q  126 ggcaacccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccatttggtgtattgtacgcagtcttaccctg-atgtacacaagag 224  Q
    |||| |||||||||||  ||||||| ||||||| ||||  |||||||  ||||||||||||||||| | ||||| | |||||||||  | ||||||||||    
T  32233139 ggcagcccggtgcactgaagctccctcatatgcagggtttgggaaggaatcccaccatttggtgtaatatacgctgccttaccctgtttttacacaagag 32233238  T
Q  225 gttgtttc 232  Q
    ||||||||    
T  32233239 gttgtttc 32233246  T

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Target: chr7; HSP #46
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 147 - 211
Target Start/End: Complemental strand, 33500625 - 33500559
Alignment:
Q  147 tcccgcatatgcggggtccgggaaggggtcccacca--tttggtgtattgtacgcagtcttaccctg 211  Q
    ||||||||| || |||||||||||||||||||||||  ||| |||||| ||||||||||||||||||    
T  33500625 tcccgcatacgcagggtccgggaaggggtcccaccattttttgtgtatagtacgcagtcttaccctg 33500559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 126 - 211
Target Start/End: Original strand, 39093443 - 39093529
Alignment:
Q  126 ggcaacccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccatt-tggtgtattgtacgcagtcttaccctg 211  Q
    |||| |||||||||||| |||| | ||||||||  | ||||||||||| |||||| ||| ||||||||||||| |||||||||||||    
T  39093443 ggcagcccggtgcactaaagcttctgcatatgcaagttccgggaagggttcccactattatggtgtattgtacacagtcttaccctg 39093529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 126 - 201
Target Start/End: Original strand, 45018927 - 45019006
Alignment:
Q  126 ggcaacccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccacca----tttggtgtattgtacgcag 201  Q
    ||||||| ||||||||| |||||||||||| || |||||||||||||||| ||||||    |||||| ||||||||||||    
T  45018927 ggcaacctggtgcactaaagctcccgcatacgcagggtccgggaaggggttccaccagttttttggtatattgtacgcag 45019006  T

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Target: chr7; HSP #49
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 166 - 210
Target Start/End: Original strand, 8148989 - 8149033
Alignment:
Q  166 gggaaggggtcccaccatttggtgtattgtacgcagtcttaccct 210  Q
    |||||||||||||||||||||||||||||||||||  ||||||||    
T  8148989 gggaaggggtcccaccatttggtgtattgtacgcaaccttaccct 8149033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 144 - 211
Target Start/End: Original strand, 28078154 - 28078221
Alignment:
Q  144 agctcccgcatatgcggggtccgggaaggggtcccaccatttggtgtattgtacgcagtcttaccctg 211  Q
    ||||| ||||||||| || | |||||||||||||||||||||||||||||| | |||  |||||||||    
T  28078154 agctctcgcatatgcaggattcgggaaggggtcccaccatttggtgtattgcatgcaaccttaccctg 28078221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 132 - 201
Target Start/End: Original strand, 36267827 - 36267897
Alignment:
Q  132 ccggtgcactagagctcccgcatatgcggggtccgggaag-gggtcccaccatttggtgtattgtacgcag 201  Q
    ||||||||||| ||||||||||||  | |||| ||||||  |||||| |||||||||||||||||||||||    
T  36267827 ccggtgcactaaagctcccgcatacacagggttcgggaaatgggtccaaccatttggtgtattgtacgcag 36267897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 134 - 201
Target Start/End: Complemental strand, 39124018 - 39123949
Alignment:
Q  134 ggtgcactagagctcccgcatatgcggggtccgggaaggggtcccacca--tttggtgtattgtacgcag 201  Q
    ||||||| | ||||||| |||| || |||||||||||||||||||||||  ||||||||||| |||||||    
T  39124018 ggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcag 39123949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 133 - 208
Target Start/End: Original strand, 13792161 - 13792237
Alignment:
Q  133 cggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccattt-ggtgtattgtacgcagtcttacc 208  Q
    |||||||| | |||||| ||||| || |||| || ||||||||||| |||||| ||||||||||| |||||||||||    
T  13792161 cggtgcacaaaagctccagcatacgcagggttcgagaaggggtcccgccatttgggtgtattgtatgcagtcttacc 13792237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 126 - 197
Target Start/End: Original strand, 23618981 - 23619052
Alignment:
Q  126 ggcaacccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccatttggtgtattgtac 197  Q
    ||||||||| ||||||| |||||| ||| | ||  |||| | ||||||||||||||||||| ||||||||||    
T  23618981 ggcaacccgctgcactaaagctcctgcaaacgcaaggtctgcgaaggggtcccaccatttgatgtattgtac 23619052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 200
Target Start/End: Original strand, 23065929 - 23066003
Alignment:
Q  126 ggcaacccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccatttggtgtattgtacgca 200  Q
    ||||| ||||||||| | ||||||| ||||||| || | ||| ||||| ||||| ||| ||||||||||||||||    
T  23065929 ggcaatccggtgcaccaaagctcccacatatgcaggattcggaaagggatcccatcatatggtgtattgtacgca 23066003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 126 - 200
Target Start/End: Original strand, 3469179 - 3469255
Alignment:
Q  126 ggcaacccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccacca--tttggtgtattgtacgca 200  Q
    |||||||| | |||||| ||||||||||||  | |||||  |||||||||||| |||  ||||||||||||||||||    
T  3469179 ggcaacccagcgcactaaagctcccgcatacacagggtctaggaaggggtcccgccatttttggtgtattgtacgca 3469255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 135 - 196
Target Start/End: Original strand, 21139761 - 21139822
Alignment:
Q  135 gtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccatttggtgtattgta 196  Q
    |||||||| |||| |||||||  | | || ||||||||||||||||||||||||||| ||||    
T  21139761 gtgcactaaagcttccgcatacacagagttcgggaaggggtcccaccatttggtgtactgta 21139822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 127 - 208
Target Start/End: Complemental strand, 25198856 - 25198775
Alignment:
Q  127 gcaacccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccatttggtgtattgtacgcagtcttacc 208  Q
    |||||||||||||||| ||||| | |||| |  ||||| |||||||| ||| ||||||| ||| ||| ||||| ||||||||    
T  25198856 gcaacccggtgcactaaagctctcacatacgaagggtctgggaagggatcctaccatttagtgcattatacgcggtcttacc 25198775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 87; Significance: 8e-42; HSPs: 37)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 126 - 232
Target Start/End: Original strand, 1354761 - 1354867
Alignment:
Q  126 ggcaacccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccatttggtgtattgtacgcagtcttaccctgatgtacacaagagg 225  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||| | |||||||||||    
T  1354761 ggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgttttacacaagagg 1354860  T
Q  226 ttgtttc 232  Q
     ||||||    
T  1354861 ctgtttc 1354867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 126 - 232
Target Start/End: Complemental strand, 1347093 - 1346987
Alignment:
Q  126 ggcaacccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccatttggtgtattgtacgcagtcttaccctgatgtacacaagagg 225  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||| | |||||||| ||    
T  1347093 ggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgttttacacaagtgg 1346994  T
Q  226 ttgtttc 232  Q
     ||||||    
T  1346993 ctgtttc 1346987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 126 - 232
Target Start/End: Complemental strand, 26097289 - 26097183
Alignment:
Q  126 ggcaacccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccatttggtgtattgtacgcagtcttaccctgatgtacacaagagg 225  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||  ||||||||||||||||||||| ||||||||| | |||||||||||    
T  26097289 ggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccttcatttggtgtattgtacgcagccttaccctgttttacacaagagg 26097190  T
Q  226 ttgtttc 232  Q
     ||||||    
T  26097189 ctgtttc 26097183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 126 - 232
Target Start/End: Complemental strand, 25557854 - 25557748
Alignment:
Q  126 ggcaacccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccatttggtgtattgtacgcagtcttaccctgatgtacacaagagg 225  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||| ||  ||||||||||||||||||||| ||||||||| | |||||||||||    
T  25557854 ggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggttccttcatttggtgtattgtacgcagccttaccctgttttacacaagagg 25557755  T
Q  226 ttgtttc 232  Q
     ||||||    
T  25557754 ctgtttc 25557748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 126 - 211
Target Start/End: Original strand, 29355859 - 29355946
Alignment:
Q  126 ggcaacccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccat--ttggtgtattgtacgcagtcttaccctg 211  Q
    ||||||||||||||||| |||||||||||| || ||||||||||||||||||||||||  |||||||||||||||||| |||||||||    
T  29355859 ggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctg 29355946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 126 - 200
Target Start/End: Complemental strand, 12892140 - 12892064
Alignment:
Q  126 ggcaacccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccat--ttggtgtattgtacgca 200  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||  |||||||||| ||||||    
T  12892140 ggcaacccggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtattatacgca 12892064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 126 - 211
Target Start/End: Original strand, 12221918 - 12222006
Alignment:
Q  126 ggcaacccggtgcactaga-gctcccgcatatgcggggtccgggaaggggtcccaccat--ttggtgtattgtacgcagtcttaccctg 211  Q
    ||||||||||||||||| | ||||||||||| || ||||||||||||||||||||||||  |||||||||||||||||| |||||||||    
T  12221918 ggcaacccggtgcactaaaagctcccgcatacgcagggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctg 12222006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 126 - 200
Target Start/End: Original strand, 23930131 - 23930205
Alignment:
Q  126 ggcaacccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccatttggtgtattgtacgca 200  Q
    |||||| |||||||||| |||||||||||| || ||||||| |||||||||||||||| ||||||||||||||||    
T  23930131 ggcaactcggtgcactaaagctcccgcataagcagggtccgtgaaggggtcccaccatctggtgtattgtacgca 23930205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 132 - 225
Target Start/End: Complemental strand, 28007750 - 28007658
Alignment:
Q  132 ccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccatttggtgtattgtacgcagtcttaccctgatgtacacaagagg 225  Q
    |||||||||||||||| ||||||||| | |||  |||||||||||||| ||||||||||||||||||||| || |||||| | |||||||||||    
T  28007750 ccggtgcactagagcttccgcatatg-gaggttagggaaggggtcccagcatttggtgtattgtacgcagcctgaccctgttttacacaagagg 28007658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 139 - 208
Target Start/End: Complemental strand, 32579543 - 32579474
Alignment:
Q  139 actagagctcccgcatatgcggggtccgggaaggggtcccaccatttggtgtattgtacgcagtcttacc 208  Q
    |||| ||||||||||||||| ||||| |||||||||||||||||||||| ||||||||||||| ||||||    
T  32579543 actaaagctcccgcatatgcagggtctgggaaggggtcccaccatttggggtattgtacgcaggcttacc 32579474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 126 - 232
Target Start/End: Original strand, 2166414 - 2166524
Alignment:
Q  126 ggcaacccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccat--ttggtgtattgtacgcagtcttaccctg--atgtacacaa 221  Q
    ||||||||||||||||| |||||||| ||||   ||||||||||||||||||||||||  |||||||||||||||||  |||| ||||   | |||||||    
T  2166414 ggcaacccggtgcactaaagctcccgaatatatagggtccgggaaggggtcccaccattattggtgtattgtacgcaaccttatcctgtattttacacaa 2166513  T
Q  222 gaggttgtttc 232  Q
    |||||||||||    
T  2166514 gaggttgtttc 2166524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 126 - 232
Target Start/End: Original strand, 2178047 - 2178157
Alignment:
Q  126 ggcaacccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccat--ttggtgtattgtacgcagtcttaccctg--atgtacacaa 221  Q
    ||||||||||||||||| |||||||| ||||   ||||||||||||||||||||||||  |||||||||||||||||  |||| ||||   | |||||||    
T  2178047 ggcaacccggtgcactaaagctcccgaatatatagggtccgggaaggggtcccaccattattggtgtattgtacgcaaccttatcctgtattttacacaa 2178146  T
Q  222 gaggttgtttc 232  Q
    |||||||||||    
T  2178147 gaggttgtttc 2178157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 126 - 194
Target Start/End: Complemental strand, 13267856 - 13267788
Alignment:
Q  126 ggcaacccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccatttggtgtattg 194  Q
    ||||||||||||||||  |||||||||||| || |||||| ||||||||||||||||||||||||||||    
T  13267856 ggcaacccggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttggtgtattg 13267788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 129 - 208
Target Start/End: Original strand, 3815084 - 3815163
Alignment:
Q  129 aacccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccatttggtgtattgtacgcagtcttacc 208  Q
    |||||||||||||| |||| ||||||| |  |||| |||||| |||||||||||||||||||||||||||||||| ||||    
T  3815084 aacccggtgcactaaagcttccgcatacgtagggttcgggaaagggtcccaccatttggtgtattgtacgcagtcgtacc 3815163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 126 - 194
Target Start/End: Original strand, 14975094 - 14975164
Alignment:
Q  126 ggcaacccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccat--ttggtgtattg 194  Q
    ||||||||||||||||| | |||||||||||||||||| |||||||||||||||||||  |||||||||||    
T  14975094 ggcaacccggtgcactaaaactcccgcatatgcggggttcgggaaggggtcccaccattattggtgtattg 14975164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 126 - 184
Target Start/End: Complemental strand, 6808526 - 6808468
Alignment:
Q  126 ggcaacccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccatt 184  Q
    ||||||||||||||||| ||||||||||||  | |||||||||||||||||||||||||    
T  6808526 ggcaacccggtgcactaaagctcccgcatacacagggtccgggaaggggtcccaccatt 6808468  T

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Target: chr6; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 126 - 232
Target Start/End: Complemental strand, 9161255 - 9161146
Alignment:
Q  126 ggcaacccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccat--ttggtgtattgtacgcagtcttaccctg-atgtacacaag 222  Q
    ||||||| ||||||||| |||| ||||||| || ||||||| ||||||||||||||||  ||| |||||||||||||| ||||| |||  | ||||||||    
T  9161255 ggcaacctggtgcactaaagcttccgcatacgcagggtccgagaaggggtcccaccattattgatgtattgtacgcagccttactctgtttttacacaag 9161156  T
Q  223 aggttgtttc 232  Q
    ||| ||||||    
T  9161155 aggctgtttc 9161146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 126 - 201
Target Start/End: Complemental strand, 12886044 - 12885967
Alignment:
Q  126 ggcaacccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccacca--tttggtgtattgtacgcag 201  Q
    ||||||||||||||||| ||||||| |||| || ||||| |||||||||||||||||  ||| |||||||||||||||    
T  12886044 ggcaacccggtgcactaaagctcccacatacgcagggtctgggaaggggtcccaccattttttgtgtattgtacgcag 12885967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 126 - 232
Target Start/End: Original strand, 23240828 - 23240934
Alignment:
Q  126 ggcaacccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccatttggtgtattgtacgcagtcttaccctgatgtacacaagagg 225  Q
    |||| ||| |||||||| |||||||||||| ||   ||||  ||||||||||||||| ||||| |||||||||||  ||||||||| | |||||||||||    
T  23240828 ggcagcccagtgcactaaagctcccgcatacgcattgtcctagaaggggtcccaccaattggtatattgtacgcaaacttaccctgttttacacaagagg 23240927  T
Q  226 ttgtttc 232  Q
     ||||||    
T  23240928 ctgtttc 23240934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 126 - 199
Target Start/End: Original strand, 383764 - 383837
Alignment:
Q  126 ggcaacccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccatttggtgtattgtacgc 199  Q
    |||||||||||| |||  |||||||||||| || ||||| | ||||||||||||| ||||||||||||||||||    
T  383764 ggcaacccggtggactgaagctcccgcatacgcagggtctgagaaggggtcccacaatttggtgtattgtacgc 383837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 135 - 211
Target Start/End: Original strand, 7947384 - 7947461
Alignment:
Q  135 gtgcactagagctcccgcatatgcggggtccgggaaggggtcccacca-tttggtgtattgtacgcagtcttaccctg 211  Q
    |||||||| ||||||| |||| ||  |||||||||||||| ||||||| ||||||||||||||||||| |||||||||    
T  7947384 gtgcactaaagctcccacatacgcaaggtccgggaagggggcccaccattttggtgtattgtacgcagccttaccctg 7947461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 126 - 193
Target Start/End: Original strand, 15866043 - 15866110
Alignment:
Q  126 ggcaacccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccatttggtgtatt 193  Q
    |||||| | |||||||| || ||||||| | || ||||||||||||||||||||||||||||||||||    
T  15866043 ggcaactcagtgcactatagatcccgcaaacgcagggtccgggaaggggtcccaccatttggtgtatt 15866110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 154 - 208
Target Start/End: Complemental strand, 6024338 - 6024282
Alignment:
Q  154 tatgcggggtccgggaaggggtcccaccatt--tggtgtattgtacgcagtcttacc 208  Q
    |||||||||||||||||| ||||||| ||||  ||||||||||||||||||||||||    
T  6024338 tatgcggggtccgggaagaggtcccatcattattggtgtattgtacgcagtcttacc 6024282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 126 - 231
Target Start/End: Complemental strand, 1941986 - 1941879
Alignment:
Q  126 ggcaacccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccatttggtgtattgtacgcagtcttaccctg--atgtacacaaga 223  Q
    |||||| |||||||| | | ||||||||||  |  | ||| ||| |||||||||||||| |||||||||||||||| |||||||||   | |||||||||    
T  1941986 ggcaacacggtgcacaaaaactcccgcatacacaagatccaggatggggtcccaccattcggtgtattgtacgcagccttaccctgttttttacacaaga 1941887  T
Q  224 ggttgttt 231  Q
    ||||||||    
T  1941886 ggttgttt 1941879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 126 - 203
Target Start/End: Original strand, 3116133 - 3116212
Alignment:
Q  126 ggcaacccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccacca--tttggtgtattgtacgcagtc 203  Q
    ||||| |||||| |||| |||||||||||| ||  |||||| |||||||||||||||  ||||||||||||| |||||||    
T  3116133 ggcaatccggtgtactaaagctcccgcatacgcaaggtccgagaaggggtcccaccatttttggtgtattgtgcgcagtc 3116212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 128 - 232
Target Start/End: Original strand, 18277199 - 18277305
Alignment:
Q  128 caacccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccatttggtgtattgtacgcagtcttaccctga--tgtacacaagagg 225  Q
    |||||||||||| || |||||||||||| |  | |||  ||||||||||||||||||||||||  ||||| ||  ||||||||||  | |||||||||||    
T  18277199 caacccggtgcagtaaagctcccgcatacgtagagtctaggaaggggtcccaccatttggtgttctgtactcaaccttaccctgatttttacacaagagg 18277298  T
Q  226 ttgtttc 232  Q
     ||||||    
T  18277299 ctgtttc 18277305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 146 - 196
Target Start/End: Complemental strand, 22967287 - 22967237
Alignment:
Q  146 ctcccgcatatgcggggtccgggaaggggtcccaccatttggtgtattgta 196  Q
    |||||||||| || ||||||  |||||||||||||||||||||||||||||    
T  22967287 ctcccgcataggcagggtccaagaaggggtcccaccatttggtgtattgta 22967237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 146 - 196
Target Start/End: Original strand, 23821106 - 23821156
Alignment:
Q  146 ctcccgcatatgcggggtccgggaaggggtcccaccatttggtgtattgta 196  Q
    |||||||||| || ||||||  |||||||||||||||||||||||||||||    
T  23821106 ctcccgcataggcagggtccaagaaggggtcccaccatttggtgtattgta 23821156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 138 - 188
Target Start/End: Complemental strand, 24097696 - 24097646
Alignment:
Q  138 cactagagctcccgcatatgcggggtccgggaaggggtcccaccatttggt 188  Q
    ||||| |||| ||||||| || |||||||||||||||||||||||||||||    
T  24097696 cactaaagcttccgcatacgcagggtccgggaaggggtcccaccatttggt 24097646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 133 - 199
Target Start/End: Complemental strand, 33138957 - 33138891
Alignment:
Q  133 cggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccatttggtgtattgtacgc 199  Q
    |||||||||| |||| | |||||  | |||||||| || ||||||||||||||||||||||||||||    
T  33138957 cggtgcactaaagctactgcatacacagggtccggaaaagggtcccaccatttggtgtattgtacgc 33138891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 126 - 190
Target Start/End: Original strand, 10734909 - 10734974
Alignment:
Q  126 ggcaacccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccacca-tttggtgt 190  Q
    |||| ||||||| |||| |||||||||||| || ||||||||||||||| ||||||| ||||||||    
T  10734909 ggcagcccggtggactaaagctcccgcatacgcagggtccgggaagggggcccaccactttggtgt 10734974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 132 - 190
Target Start/End: Complemental strand, 11395886 - 11395827
Alignment:
Q  132 ccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccacca-tttggtgt 190  Q
    |||||| |||| |||||||||||| || || |||||||||||||||||||| ||||||||    
T  11395886 ccggtggactaaagctcccgcatacgcaggatccgggaaggggtcccaccactttggtgt 11395827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 126 - 193
Target Start/End: Original strand, 15865861 - 15865928
Alignment:
Q  126 ggcaacccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccatttggtgtatt 193  Q
    |||||| | |||||||| || || |||| | || |||||| |||||||||||||||||||||||||||    
T  15865861 ggcaactcagtgcactatagatcacgcaaacgcagggtccaggaaggggtcccaccatttggtgtatt 15865928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 138 - 177
Target Start/End: Original strand, 20906802 - 20906841
Alignment:
Q  138 cactagagctcccgcatatgcggggtccgggaaggggtcc 177  Q
    ||||| ||||||||||||||||||||| ||||||||||||    
T  20906802 cactaaagctcccgcatatgcggggtctgggaaggggtcc 20906841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 126 - 157
Target Start/End: Complemental strand, 25997780 - 25997749
Alignment:
Q  126 ggcaacccggtgcactagagctcccgcatatg 157  Q
    ||||||||||||||||||||||||||||||||    
T  25997780 ggcaacccggtgcactagagctcccgcatatg 25997749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 124 - 175
Target Start/End: Original strand, 30786376 - 30786427
Alignment:
Q  124 aaggcaacccggtgcactagagctcccgcatatgcggggtccgggaaggggt 175  Q
    ||||||||||||||||||| |||||||||||| ||  ||||| |||||||||    
T  30786376 aaggcaacccggtgcactaaagctcccgcatacgcacggtccaggaaggggt 30786427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 131 - 195
Target Start/End: Complemental strand, 19340954 - 19340889
Alignment:
Q  131 cccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccacca-tttggtgtattgt 195  Q
    |||| ||||||| |||| ||||||| || |||||| ||||||||||||| || |||||||||||||    
T  19340954 cccgttgcactaaagcttccgcatacgccgggtccaggaaggggtcccatcattttggtgtattgt 19340889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 87; Significance: 8e-42; HSPs: 55)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 126 - 232
Target Start/End: Complemental strand, 32703553 - 32703447
Alignment:
Q  126 ggcaacccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccatttggtgtattgtacgcagtcttaccctgatgtacacaagagg 225  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||| | |||||||||||    
T  32703553 ggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgttttacacaagagg 32703454  T
Q  226 ttgtttc 232  Q
     ||||||    
T  32703453 ctgtttc 32703447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 126 - 232
Target Start/End: Complemental strand, 7368527 - 7368421
Alignment:
Q  126 ggcaacccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccatttggtgtattgtacgcagtcttaccctgatgtacacaagagg 225  Q
    ||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||| |||||||||||||||||| ||||||||| | |||||||||||    
T  7368527 ggcaacccggtgcactagagctcccacatatgcagggtccgggaaggggtcccaccaattggtgtattgtacgcagccttaccctgttttacacaagagg 7368428  T
Q  226 ttgtttc 232  Q
     ||||||    
T  7368427 ctgtttc 7368421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 126 - 213
Target Start/End: Original strand, 34154818 - 34154905
Alignment:
Q  126 ggcaacccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccatttggtgtattgtacgcagtcttaccctgat 213  Q
    |||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  34154818 ggcaacccggtgcactagagctaccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgat 34154905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 126 - 232
Target Start/End: Complemental strand, 41014449 - 41014342
Alignment:
Q  126 ggcaacccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccatttggtgtattgtacgcagtcttaccctg-atgtacacaagag 224  Q
    ||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||  | ||||||||||    
T  41014449 ggcaacccggtgcactaaagctcccgcatatgcggggtccaggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttttacacaagag 41014350  T
Q  225 gttgtttc 232  Q
    | ||||||    
T  41014349 gctgtttc 41014342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 126 - 232
Target Start/End: Original strand, 8169988 - 8170094
Alignment:
Q  126 ggcaacccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccatttggtgtattgtacgcagtcttaccctgatgtacacaagagg 225  Q
    ||||||||||||||||  | ||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||| | ||||||| |||    
T  8169988 ggcaacccggtgcactgaaactcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgttttacacaaaagg 8170087  T
Q  226 ttgtttc 232  Q
     ||||||    
T  8170088 ctgtttc 8170094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 126 - 232
Target Start/End: Complemental strand, 35710442 - 35710336
Alignment:
Q  126 ggcaacccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccatttggtgtattgtacgcagtcttaccctgatgtacacaagagg 225  Q
    |||||||||||||||||||||||||||||||||  | |||||||||||||||||||||||||||||||| |||||| ||||||||  | |||||||||||    
T  35710442 ggcaacccggtgcactagagctcccgcatatgcatgttccgggaaggggtcccaccatttggtgtattgaacgcagccttaccctattttacacaagagg 35710343  T
Q  226 ttgtttc 232  Q
     ||||||    
T  35710342 ctgtttc 35710336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 126 - 211
Target Start/End: Original strand, 4619108 - 4619195
Alignment:
Q  126 ggcaacccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccat--ttggtgtattgtacgcagtcttaccctg 211  Q
    ||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||  |||||||||||||||||| |||||||||    
T  4619108 ggcaacccggtgcactaaagctctcgcatatgcggggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctg 4619195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 126 - 211
Target Start/End: Original strand, 13801771 - 13801858
Alignment:
Q  126 ggcaacccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccat--ttggtgtattgtacgcagtcttaccctg 211  Q
    ||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||  |||||||||||||||||| |||||||||    
T  13801771 ggcaacccggtgcactaaagctctcgcatatgcggggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctg 13801858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 126 - 210
Target Start/End: Complemental strand, 24449021 - 24448937
Alignment:
Q  126 ggcaacccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccatttggtgtattgtacgcagtcttaccct 210  Q
    ||||||||||||||||| |||||| ||||| || |||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  24449021 ggcaacccggtgcactaaagctcctgcatacgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccct 24448937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 126 - 211
Target Start/End: Complemental strand, 38879714 - 38879627
Alignment:
Q  126 ggcaacccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccat--ttggtgtattgtacgcagtcttaccctg 211  Q
    ||||||||||||||||| |||||||||||| || ||||||||||||||||||||||||  |||||||||||||||||| |||||||||    
T  38879714 ggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctg 38879627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 126 - 197
Target Start/End: Complemental strand, 16957445 - 16957374
Alignment:
Q  126 ggcaacccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccatttggtgtattgtac 197  Q
    ||||||||||||||||| |||||||||||| || ||||||||||||||||||||||||||||||||||||||    
T  16957445 ggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccatttggtgtattgtac 16957374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 126 - 208
Target Start/End: Complemental strand, 20135737 - 20135653
Alignment:
Q  126 ggcaacccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccat--ttggtgtattgtacgcagtcttacc 208  Q
    ||||||||||||||||  |||||| |||||||||||||||||||||||||||||||||  |||||||||||||||||| ||||||    
T  20135737 ggcaacccggtgcactgaagctcctgcatatgcggggtccgggaaggggtcccaccattattggtgtattgtacgcagccttacc 20135653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 131 - 211
Target Start/End: Complemental strand, 43574732 - 43574652
Alignment:
Q  131 cccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccatttggtgtattgtacgcagtcttaccctg 211  Q
    |||||||| ||| |||||||||||| || ||||||||||||||||||||||||||||| |||||||||||| |||||||||    
T  43574732 cccggtgctctaaagctcccgcatacgcagggtccgggaaggggtcccaccatttggtatattgtacgcagccttaccctg 43574652  T

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Target: chr5; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 129 - 211
Target Start/End: Original strand, 16880654 - 16880736
Alignment:
Q  129 aacccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccatttggtgtattgtacgcagtcttaccctg 211  Q
    |||||||||||||| |||||||||||| ||  ||||||||||| |||| |||||||||||||||||||||||| |||||||||    
T  16880654 aacccggtgcactaaagctcccgcatacgcatggtccgggaagtggtcacaccatttggtgtattgtacgcagccttaccctg 16880736  T

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Target: chr5; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 135 - 232
Target Start/End: Original strand, 19142956 - 19143054
Alignment:
Q  135 gtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccatttggtgtattgtacgcagtcttaccctg-atgtacacaagaggttgtttc 232  Q
    |||||||| | |||||||||| ||  ||||||||||||||||||||||||||||||| ||||||||| |||||||||  | ||||||||||||||||||    
T  19142956 gtgcactaaatctcccgcatacgcatggtccgggaaggggtcccaccatttggtgtactgtacgcagccttaccctgtttttacacaagaggttgtttc 19143054  T

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Target: chr5; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 126 - 206
Target Start/End: Complemental strand, 1565562 - 1565483
Alignment:
Q  126 ggcaacccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccatttggtgtattgtacgcagtctta 206  Q
    ||||||||||||||||| ||||||| ||||||| ||||||||||||||||||| |||||||||| ||||||||||| ||||    
T  1565562 ggcaacccggtgcacta-agctcccacatatgcagggtccgggaaggggtcccgccatttggtgcattgtacgcagcctta 1565483  T

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Target: chr5; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 126 - 211
Target Start/End: Complemental strand, 43334335 - 43334249
Alignment:
Q  126 ggcaacccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccacca--tttggtgtattgtacgcagtcttaccctg 211  Q
    ||||||||||||||||| |||||||||||  || |||||||||||||||||||||||  ||||||||||||||||||| |||||||||    
T  43334335 ggcaacccggtgcactaaagctcccgcatc-gcagggtccgggaaggggtcccaccatttttggtgtattgtacgcagccttaccctg 43334249  T

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Target: chr5; HSP #18
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 126 - 181
Target Start/End: Original strand, 16028628 - 16028683
Alignment:
Q  126 ggcaacccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccacc 181  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  16028628 ggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccacc 16028683  T

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Target: chr5; HSP #19
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 126 - 200
Target Start/End: Complemental strand, 1405318 - 1405244
Alignment:
Q  126 ggcaacccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccatttggtgtattgtacgca 200  Q
    ||||| |||||| |||||||||||||||||||| |||| | |||| |||||||||||||||||||||||||||||    
T  1405318 ggcaatccggtgtactagagctcccgcatatgcagggttcaggaaagggtcccaccatttggtgtattgtacgca 1405244  T

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Target: chr5; HSP #20
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 134 - 231
Target Start/End: Original strand, 7097772 - 7097870
Alignment:
Q  134 ggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccatttggtgtattgtacgcagtcttaccctg-atgtacacaagaggttgttt 231  Q
    ||||||||| |||||||||||| || |||| |||||||||||| |||||||||||||||||||||||  |||||||||  | ||||||||||| |||||    
T  7097772 ggtgcactaaagctcccgcatacgcagggttcgggaaggggtctcaccatttggtgtattgtacgcaaccttaccctgtttttacacaagaggctgttt 7097870  T

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Target: chr5; HSP #21
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 133 - 207
Target Start/End: Original strand, 22861680 - 22861754
Alignment:
Q  133 cggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccatttggtgtattgtacgcagtcttac 207  Q
    |||||||||||||||||||||||||| |||| || ||||||||||||||||||| ||||||||  ||||||||||    
T  22861680 cggtgcactagagctcccgcatatgcagggttcgagaaggggtcccaccatttgatgtattgtgagcagtcttac 22861754  T

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Target: chr5; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 145 - 235
Target Start/End: Complemental strand, 2838890 - 2838799
Alignment:
Q  145 gctcccgcatatgcggggtccgggaaggggtcccaccatttggtgtattgtacgcagtcttaccctg-atgtacacaagaggttgtttctga 235  Q
    ||||||||||| || ||||||| |||||| ||||||||||||||||||||||||||| |||||||||  | ||||||||| | |||||||||    
T  2838890 gctcccgcatacgcagggtccgagaagggatcccaccatttggtgtattgtacgcagccttaccctgtttttacacaagatgctgtttctga 2838799  T

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Target: chr5; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 126 - 181
Target Start/End: Original strand, 30877568 - 30877623
Alignment:
Q  126 ggcaacccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccacc 181  Q
    ||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||    
T  30877568 ggcaacccggtgcactagagctcccacatatgcagggtccgggaaggggtcccacc 30877623  T

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Target: chr5; HSP #24
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 124 - 211
Target Start/End: Complemental strand, 27328887 - 27328798
Alignment:
Q  124 aaggcaacccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccat--ttggtgtattgtacgcagtcttaccctg 211  Q
    ||||||| ||| |||| || |||||||||||| || |||| |||||||||||||||||||  |||||||||||||||||| |||||||||    
T  27328887 aaggcaatccgatgcattaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagccttaccctg 27328798  T

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Target: chr5; HSP #25
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 132 - 211
Target Start/End: Original strand, 9794388 - 9794467
Alignment:
Q  132 ccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccatttggtgtattgtacgcagtcttaccctg 211  Q
    ||||||||||| |||| | |||||||| ||||| | |||||| |||||| ||||||||||||||| ||||||||||||||    
T  9794388 ccggtgcactaaagcttctgcatatgctgggtctgtgaagggatcccactatttggtgtattgtatgcagtcttaccctg 9794467  T

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Target: chr5; HSP #26
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 126 - 210
Target Start/End: Original strand, 12006332 - 12006418
Alignment:
Q  126 ggcaacccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccat--ttggtgtattgtacgcagtcttaccct 210  Q
    |||||| |||||||||| |||||||||||| || ||||| ||||||||||||||||||  ||||||||||||| | || ||||||||    
T  12006332 ggcaacacggtgcactaaagctcccgcataggcagggtctgggaaggggtcccaccattattggtgtattgtatggagccttaccct 12006418  T

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Target: chr5; HSP #27
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 144 - 211
Target Start/End: Complemental strand, 22600567 - 22600500
Alignment:
Q  144 agctcccgcatatgcggggtccgggaaggggtcccaccatttggtgtattgtacgcagtcttaccctg 211  Q
    |||||||||||| || || ||||||||||| ||||||||||||||||||||||| ||| |||||||||    
T  22600567 agctcccgcatacgcaggatccgggaagggatcccaccatttggtgtattgtacacagccttaccctg 22600500  T

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Target: chr5; HSP #28
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 124 - 211
Target Start/End: Complemental strand, 30006458 - 30006371
Alignment:
Q  124 aaggcaacccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccatttggtgtattgtacgcagtcttaccctg 211  Q
    ||||||||||||||||||| ||||||||||||    ||  |||||||||||||||||||||| ||||| ||||| ||| |||||||||    
T  30006458 aaggcaacccggtgcactaaagctcccgcatacataggccccgggaaggggtcccaccatttagtgtaatgtacacagccttaccctg 30006371  T

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Target: chr5; HSP #29
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 126 - 184
Target Start/End: Complemental strand, 25622591 - 25622533
Alignment:
Q  126 ggcaacccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccatt 184  Q
    ||||| ||||||||||| |||||||||||| || |||||||||||||||||||||||||    
T  25622591 ggcaatccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccatt 25622533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 126 - 211
Target Start/End: Complemental strand, 3771470 - 3771385
Alignment:
Q  126 ggcaacccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccatttggtgtattgtacgcagtcttaccctg 211  Q
    |||| |||||||||||| ||||||| ||||  | | ||||||||||||||||||||| |||||||||||| | ||| |||||||||    
T  3771470 ggcagcccggtgcactaaagctcccacatacacagagtccgggaaggggtcccaccaattggtgtattgttcacagccttaccctg 3771385  T

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Target: chr5; HSP #31
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 126 - 200
Target Start/End: Original strand, 12575664 - 12575739
Alignment:
Q  126 ggcaacccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccacca-tttggtgtattgtacgca 200  Q
    |||| |||||||||| | |||||| ||||| || |||||| |||||||||||||||| ||||||||||||||||||    
T  12575664 ggcagcccggtgcaccaaagctcctgcatacgcagggtccaggaaggggtcccaccattttggtgtattgtacgca 12575739  T

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Target: chr5; HSP #32
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 131 - 202
Target Start/End: Complemental strand, 13774991 - 13774920
Alignment:
Q  131 cccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccatttggtgtattgtacgcagt 202  Q
    |||||||||||| |||||||||||| || |||||||| ||||| |||  |||||||||||||||| ||||||    
T  13774991 cccggtgcactaaagctcccgcatacgcagggtccggaaagggatcctgccatttggtgtattgtgcgcagt 13774920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 144 - 232
Target Start/End: Original strand, 24323727 - 24323817
Alignment:
Q  144 agctcccgcatatgcggggtccgggaaggggtcccaccatttggtgtattgtacgcagtcttaccctg--atgtacacaagaggttgtttc 232  Q
    ||||||||||||| | ||||| ||||||||||||||| |||||| ||||| ||||||  |||||||||   | ||||||||||||||||||    
T  24323727 agctcccgcatatacagggtctgggaaggggtcccactatttggagtattatacgcaagcttaccctgtcttttacacaagaggttgtttc 24323817  T

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Target: chr5; HSP #34
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 144 - 232
Target Start/End: Original strand, 24360351 - 24360441
Alignment:
Q  144 agctcccgcatatgcggggtccgggaaggggtcccaccatttggtgtattgtacgcagtcttaccctg--atgtacacaagaggttgtttc 232  Q
    ||||||||||||| | ||||| ||||||||||||||| |||||| ||||| ||||||  |||||||||   | ||||||||||||||||||    
T  24360351 agctcccgcatatacagggtctgggaaggggtcccactatttggagtattatacgcaagcttaccctgtcttttacacaagaggttgtttc 24360441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 126 - 208
Target Start/End: Complemental strand, 29334527 - 29334444
Alignment:
Q  126 ggcaacccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccatt-tggtgtattgtacgcagtcttacc 208  Q
    |||| ||||||||| || || |||| |||| || ||||||||||| ||||||||||||| ||||||||||||||||| ||||||    
T  29334527 ggcagcccggtgcattaaagatcccacatacgcagggtccgggaatgggtcccaccattctggtgtattgtacgcagccttacc 29334444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 131 - 230
Target Start/End: Original strand, 208936 - 209037
Alignment:
Q  131 cccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccacca-tttggtgtattgtacgcagtcttaccctg-atgtacacaagaggttg 228  Q
    |||||||||||| |||||  |||||  | |||||| |||||||||||||||| |||||||||||| | |||| |||||||||  | ||||||||||||||    
T  208936 cccggtgcactaaagctcttgcatacccagggtccaggaaggggtcccaccattttggtgtattgaatgcagccttaccctgtttttacacaagaggttg 209035  T
Q  229 tt 230  Q
    ||    
T  209036 tt 209037  T

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Target: chr5; HSP #37
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 132 - 200
Target Start/End: Complemental strand, 1850764 - 1850696
Alignment:
Q  132 ccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccatttggtgtattgtacgca 200  Q
    ||||||||||| |||| ||||||  || |||||| ||||| |||||||||||||| |||||||||||||    
T  1850764 ccggtgcactaaagcttccgcatccgcagggtccaggaagtggtcccaccatttgatgtattgtacgca 1850696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 144 - 195
Target Start/End: Original strand, 10306496 - 10306548
Alignment:
Q  144 agctcccgcatatgcggggtccgggaaggggtcccacca-tttggtgtattgt 195  Q
    |||||||||||| || ||||||||||||||||||||||| |||||||||||||    
T  10306496 agctcccgcatacgcagggtccgggaaggggtcccaccattttggtgtattgt 10306548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 126 - 182
Target Start/End: Complemental strand, 39801647 - 39801591
Alignment:
Q  126 ggcaacccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccacca 182  Q
    ||||||||||||||||| |||||||||||| |  ||||| |||||||||||||||||    
T  39801647 ggcaacccggtgcactaaagctcccgcatacgtagggtctgggaaggggtcccacca 39801591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 126 - 185
Target Start/End: Original strand, 21784336 - 21784395
Alignment:
Q  126 ggcaacccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccattt 185  Q
    |||||| |||||||||| | |||||||||| || |||||||| |||||||||||||||||    
T  21784336 ggcaactcggtgcactaaacctcccgcatacgcagggtccggaaaggggtcccaccattt 21784395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 131 - 210
Target Start/End: Original strand, 24903705 - 24903784
Alignment:
Q  131 cccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccatttggtgtattgtacgcagtcttaccct 210  Q
    |||||||||| | || |||||| ||||| | ||||||||||||||| ||||| |||||| ||||||| || |||||||||    
T  24903705 cccggtgcaccaaagttcccgcgtatgcagtgtccgggaaggggtctcaccaattggtggattgtacacaatcttaccct 24903784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 126 - 192
Target Start/End: Original strand, 10943849 - 10943914
Alignment:
Q  126 ggcaacccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccatttggtgtat 192  Q
    |||| |||||||||||| ||||||||||| ||| |||||||||||||||||||   |||||||||||    
T  10943849 ggcagcccggtgcactaaagctcccgcat-tgcagggtccgggaaggggtcccgttatttggtgtat 10943914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 126 - 207
Target Start/End: Original strand, 11657703 - 11657785
Alignment:
Q  126 ggcaacccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccacca-tttggtgtattgtacgcagtcttac 207  Q
    |||| ||||||| |||| || |||||| | ||| |||| |||||||||||||||||| |||||||||||||| |||| |||||    
T  11657703 ggcagcccggtgaactaaagttcccgcgtgtgcagggttcgggaaggggtcccaccattttggtgtattgtatgcagccttac 11657785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 134 - 206
Target Start/End: Original strand, 12477132 - 12477205
Alignment:
Q  134 ggtgcactagagctcccgcatatgcggggtccgggaaggggtcccacca-tttggtgtattgtacgcagtctta 206  Q
    ||||||||| |||||  ||||| || |  |||||||||||||||||||| ||||||||||||||||||| ||||    
T  12477132 ggtgcactaaagctcttgcatacgcagaatccgggaaggggtcccaccattttggtgtattgtacgcagcctta 12477205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 166 - 211
Target Start/End: Complemental strand, 41426039 - 41425994
Alignment:
Q  166 gggaaggggtcccaccatttggtgtattgtacgcagtcttaccctg 211  Q
    ||||||||||||||||| ||||||||||||| |||| |||||||||    
T  41426039 gggaaggggtcccaccaattggtgtattgtatgcagccttaccctg 41425994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 126 - 210
Target Start/End: Original strand, 5873326 - 5873410
Alignment:
Q  126 ggcaacccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccatttggtgtattgtacgcagtcttaccct 210  Q
    |||| |||| ||||||| |||||||||||| || | ||||||| ||| ||||||||| |||||||| |||||  || ||||||||    
T  5873326 ggcatcccgatgcactaaagctcccgcatacgcagtgtccggggaggagtcccaccaattggtgtagtgtacttagccttaccct 5873410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 126 - 158
Target Start/End: Complemental strand, 11462956 - 11462924
Alignment:
Q  126 ggcaacccggtgcactagagctcccgcatatgc 158  Q
    |||||||||||||||||||||||||||||||||    
T  11462956 ggcaacccggtgcactagagctcccgcatatgc 11462924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 126 - 166
Target Start/End: Complemental strand, 19438797 - 19438757
Alignment:
Q  126 ggcaacccggtgcactagagctcccgcatatgcggggtccg 166  Q
    ||||||| ||||||||||||||||||||||||| |||||||    
T  19438797 ggcaacctggtgcactagagctcccgcatatgcagggtccg 19438757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 134 - 185
Target Start/End: Original strand, 4654427 - 4654478
Alignment:
Q  134 ggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccattt 185  Q
    ||||||||| ||||||||||||||| |||| || |||||| |||||||||||    
T  4654427 ggtgcactaaagctcccgcatatgcagggttcgagaagggatcccaccattt 4654478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 144 - 187
Target Start/End: Original strand, 21542489 - 21542532
Alignment:
Q  144 agctcccgcatatgcggggtccgggaaggggtcccaccatttgg 187  Q
    |||||||||||| || | ||||||||||||||||||||||||||    
T  21542489 agctcccgcatacgcagagtccgggaaggggtcccaccatttgg 21542532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 126 - 173
Target Start/End: Complemental strand, 32354258 - 32354211
Alignment:
Q  126 ggcaacccggtgcactagagctcccgcatatgcggggtccgggaaggg 173  Q
    ||||||||||||||||| ||||||||||||  | ||||||||||||||    
T  32354258 ggcaacccggtgcactaaagctcccgcatacacagggtccgggaaggg 32354211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 134 - 184
Target Start/End: Complemental strand, 29297914 - 29297864
Alignment:
Q  134 ggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccatt 184  Q
    ||||||||| ||| |||| || |||||||||||||||||| ||||||||||    
T  29297914 ggtgcactaaagcacccgtatttgcggggtccgggaagggatcccaccatt 29297864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 161 - 197
Target Start/End: Original strand, 39079790 - 39079827
Alignment:
Q  161 ggtccgggaaggggtcccacca-tttggtgtattgtac 197  Q
    |||||||||||||||||||||| |||||||||||||||    
T  39079790 ggtccgggaaggggtcccaccattttggtgtattgtac 39079827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 170 - 233
Target Start/End: Original strand, 22907913 - 22907977
Alignment:
Q  170 aggggtcccaccatttggtgtattgtacgcagtcttaccctg-atgtacacaagaggttgtttct 233  Q
    ||||||||||||||||||||||||||| |||  ||||| |||  | ||||||||||| |||||||    
T  22907913 aggggtcccaccatttggtgtattgtatgcaaccttactctgtttttacacaagaggctgtttct 22907977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 201
Target Start/End: Original strand, 28516437 - 28516513
Alignment:
Q  126 ggcaacccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccacca-tttggtgtattgtacgcag 201  Q
    ||||||| ||| ||||| |||||| ||||  || ||||| ||||| ||||||||||| |||| ||||||||||||||    
T  28516437 ggcaacctggtccactaaagctcctgcatgcgcagggtctgggaatgggtcccaccattttgatgtattgtacgcag 28516513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 84; Significance: 5e-40; HSPs: 54)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 129 - 232
Target Start/End: Original strand, 12670257 - 12670360
Alignment:
Q  129 aacccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccatttggtgtattgtacgcagtcttaccctgatgtacacaagaggttg 228  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||| | ||||||||||| ||    
T  12670257 aacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgttttacacaagaggctg 12670356  T
Q  229 tttc 232  Q
    ||||    
T  12670357 tttc 12670360  T

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Target: chr8; HSP #2
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 126 - 232
Target Start/End: Original strand, 30454101 - 30454207
Alignment:
Q  126 ggcaacccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccatttggtgtattgtacgcagtcttaccctgatgtacacaagagg 225  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||| |||||| || | |||||||||||    
T  30454101 ggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtatcgtacgcagccttaccttgttttacacaagagg 30454200  T
Q  226 ttgtttc 232  Q
     ||||||    
T  30454201 ctgtttc 30454207  T

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Target: chr8; HSP #3
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 129 - 232
Target Start/End: Original strand, 7136534 - 7136641
Alignment:
Q  129 aacccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccat--ttggtgtattgtacgcagtcttaccctg--atgtacacaagag 224  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||| |||||||||   | ||||||||||    
T  7136534 aacccggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctggtttttacacaagag 7136633  T
Q  225 gttgtttc 232  Q
    ||||||||    
T  7136634 gttgtttc 7136641  T

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Target: chr8; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 126 - 232
Target Start/End: Complemental strand, 12626021 - 12625912
Alignment:
Q  126 ggcaacccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccatttggtgtattgtacgcagtcttaccctg---atgtacacaag 222  Q
    ||||||||||||||||| |||||||||||| || |||||||||| |||||||||||||||||||||||||| ||||||||||||||    | ||||||||    
T  12626021 ggcaacccggtgcactaaagctcccgcatacgcagggtccgggagggggtcccaccatttggtgtattgtatgcagtcttaccctgtttttttacacaag 12625922  T
Q  223 aggttgtttc 232  Q
    ||||||||||    
T  12625921 aggttgtttc 12625912  T

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Target: chr8; HSP #5
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 128 - 232
Target Start/End: Complemental strand, 44530278 - 44530172
Alignment:
Q  128 caacccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccatttggtgtattgtacgcagtcttaccctg--atgtacacaagagg 225  Q
    ||||||||||||||| |||||||||||| || |||||| ||||||||||||||||||||||||||||||||||| |||||||||   | |||||||||||    
T  44530278 caacccggtgcactaaagctcccgcatacgcagggtccaggaaggggtcccaccatttggtgtattgtacgcagccttaccctgttttttacacaagagg 44530179  T
Q  226 ttgtttc 232  Q
    |||||||    
T  44530178 ttgtttc 44530172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 128 - 211
Target Start/End: Complemental strand, 16225150 - 16225065
Alignment:
Q  128 caacccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccat--ttggtgtattgtacgcagtcttaccctg 211  Q
    ||||||||||||||| |||||||||||||||||||||||||||||| |||||||||  ||||||||||||||||||||||||||||    
T  16225150 caacccggtgcactaaagctcccgcatatgcggggtccgggaagggatcccaccattattggtgtattgtacgcagtcttaccctg 16225065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 126 - 233
Target Start/End: Complemental strand, 13160832 - 13160724
Alignment:
Q  126 ggcaacccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccatttggtgtattgtacgcagtcttaccctg-atgtacacaagag 224  Q
    |||||||||| |||||  |||||||||||| || |||||||||||||||||||||||||||||||||||||||||| |||||||||  | ||||||||||    
T  13160832 ggcaacccggcgcactgaagctcccgcatacgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttttacacaagag 13160733  T
Q  225 gttgtttct 233  Q
    | |||||||    
T  13160732 gctgtttct 13160724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 126 - 211
Target Start/End: Complemental strand, 20870056 - 20869969
Alignment:
Q  126 ggcaacccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccat--ttggtgtattgtacgcagtcttaccctg 211  Q
    ||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||  |||||||||||||||||| |||||||||    
T  20870056 ggcaacccggtgcactaaagctcccgcatatgcggggtcctggaaggggtcccaccattattggtgtattgtacgcagccttaccctg 20869969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 126 - 232
Target Start/End: Complemental strand, 45071395 - 45071288
Alignment:
Q  126 ggcaacccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccatttggtgtattgtacgcagtcttaccctg-atgtacacaagag 224  Q
    ||||||||||||||||  |||||||||||| ||  ||||||||||||||||||||||||||||||||||||||||| |||||||||  | ||||||||||    
T  45071395 ggcaacccggtgcactgaagctcccgcatacgcaaggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttttacacaagag 45071296  T
Q  225 gttgtttc 232  Q
    | ||||||    
T  45071295 gctgtttc 45071288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 126 - 224
Target Start/End: Complemental strand, 19729471 - 19729373
Alignment:
Q  126 ggcaacccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccatttggtgtattgtacgcagtcttaccctgatgtacacaagag 224  Q
    ||||| || ||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||| ||| ||||||||| | |||| |||||    
T  19729471 ggcaatccagtgcactagagctcccgtatatgcagggtccgggaaggggtcccaccatttggtgtattgtacacagccttaccctgttttacataagag 19729373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 126 - 196
Target Start/End: Complemental strand, 26102648 - 26102578
Alignment:
Q  126 ggcaacccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccatttggtgtattgta 196  Q
    |||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||    
T  26102648 ggcaacccggtgcactagagctcccgcataagcagggtccgggaaggggtcccaccatttggtgtattgta 26102578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 126 - 211
Target Start/End: Original strand, 28817630 - 28817715
Alignment:
Q  126 ggcaacccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccatttggtgtattgtacgcagtcttaccctg 211  Q
    ||||||||| ||||||| |||||||||||| || ||||||||||||||||||||||||| |||||||||||||||| |||||||||    
T  28817630 ggcaacccgatgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccattgggtgtattgtacgcagccttaccctg 28817715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 126 - 211
Target Start/End: Complemental strand, 35261810 - 35261725
Alignment:
Q  126 ggcaacccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccatttggtgtattgtacgcagtcttaccctg 211  Q
    ||||||||||||||||| |||||||||||| || |||||| ||||||||||||||||||||||||||||||||||  |||||||||    
T  35261810 ggcaacccggtgcactaaagctcccgcatacgcagggtccaggaaggggtcccaccatttggtgtattgtacgcaaccttaccctg 35261725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 126 - 211
Target Start/End: Complemental strand, 36720927 - 36720842
Alignment:
Q  126 ggcaacccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccatttggtgtattgtacgcagtcttaccctg 211  Q
    ||||||| ||||||||| |||| ||||||| || |||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  36720927 ggcaaccgggtgcactaaagcttccgcatacgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctg 36720842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 126 - 211
Target Start/End: Complemental strand, 6760955 - 6760868
Alignment:
Q  126 ggcaacccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccat--ttggtgtattgtacgcagtcttaccctg 211  Q
    ||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||  ||||||||||||||| || |||||||||    
T  6760955 ggcaacccggtgcactaaagctcccgcatatgcggggtccgagaaggggtcccaccattattggtgtattgtacgaagccttaccctg 6760868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 126 - 210
Target Start/End: Original strand, 8897768 - 8897852
Alignment:
Q  126 ggcaacccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccatttggtgtattgtacgcagtcttaccct 210  Q
    ||||||| |||||| || ||||||||||||||| ||||||||||||||||||||||||||||||||||||||| || ||||||||    
T  8897768 ggcaaccgggtgcagtaaagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgtagccttaccct 8897852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 134 - 211
Target Start/End: Complemental strand, 2626645 - 2626568
Alignment:
Q  134 ggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccatttggtgtattgtacgcagtcttaccctg 211  Q
    ||||||||  ||||||||||||||| ||||| |||||||||||||| |||||||||||||||||||||||||||||||    
T  2626645 ggtgcactgaagctcccgcatatgcagggtctgggaaggggtcccatcatttggtgtattgtacgcagtcttaccctg 2626568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 126 - 211
Target Start/End: Complemental strand, 17823707 - 17823622
Alignment:
Q  126 ggcaacccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccatttggtgtattgtacgcagtcttaccctg 211  Q
    ||||||||||||||||| |||||| |||||||| |||| ||||||||||| ||||||||||||||||| |||||||||||| ||||    
T  17823707 ggcaacccggtgcactaaagctcctgcatatgcagggttcgggaaggggttccaccatttggtgtattttacgcagtcttatcctg 17823622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 134 - 211
Target Start/End: Complemental strand, 29877217 - 29877140
Alignment:
Q  134 ggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccatttggtgtattgtacgcagtcttaccctg 211  Q
    |||||||||  ||||||||||| || |||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  29877217 ggtgcactaacgctcccgcatacgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctg 29877140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 126 - 211
Target Start/End: Complemental strand, 26954266 - 26954179
Alignment:
Q  126 ggcaacccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccat--ttggtgtattgtacgcagtcttaccctg 211  Q
    |||||||| |||||||| |||||||||||||||| |||| ||||||||||||||||||  |||||||||||||||||| |||||||||    
T  26954266 ggcaacccagtgcactaaagctcccgcatatgcgaggtctgggaaggggtcccaccattattggtgtattgtacgcagccttaccctg 26954179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 127 - 211
Target Start/End: Original strand, 29521690 - 29521774
Alignment:
Q  127 gcaacccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccatttggtgtattgtacgcagtcttaccctg 211  Q
    |||||||||||||||| |||||||||||| || ||||| |||| ||| ||||||||||||||||||||||||||| |||||||||    
T  29521690 gcaacccggtgcactaaagctcccgcatacgcagggtctgggatgggttcccaccatttggtgtattgtacgcagccttaccctg 29521774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 126 - 210
Target Start/End: Complemental strand, 25250655 - 25250569
Alignment:
Q  126 ggcaacccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccat--ttggtgtattgtacgcagtcttaccct 210  Q
    ||||||||||||||||| | |||||||||||||||||| |||||||||||||||||||  |||||||||||||||||| | ||||||    
T  25250655 ggcaacccggtgcactaaatctcccgcatatgcggggttcgggaaggggtcccaccattattggtgtattgtacgcagccataccct 25250569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 128 - 210
Target Start/End: Original strand, 20284075 - 20284159
Alignment:
Q  128 caacccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccat--ttggtgtattgtacgcagtcttaccct 210  Q
    ||||||||||||||| | |||||||||| || ||||||||||||||||||||||||  |||||||||||||||||| ||||||||    
T  20284075 caacccggtgcactaaaactcccgcatacgcagggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccct 20284159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 128 - 210
Target Start/End: Original strand, 21070703 - 21070787
Alignment:
Q  128 caacccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccat--ttggtgtattgtacgcagtcttaccct 210  Q
    ||||||||||||||| | |||||||||| || ||||||||||||||||||||||||  |||||||||||||||||| ||||||||    
T  21070703 caacccggtgcactaaaactcccgcatacgcagggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccct 21070787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 126 - 207
Target Start/End: Original strand, 39460998 - 39461081
Alignment:
Q  126 ggcaacccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccat--ttggtgtattgtacgcagtcttac 207  Q
    ||||||||||||||||| |||||||||||| || ||||||||||||||||| ||||||  |||||||||||||||||| |||||    
T  39460998 ggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtctcaccattattggtgtattgtacgcagccttac 39461081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 144 - 233
Target Start/End: Original strand, 24365081 - 24365173
Alignment:
Q  144 agctcccgcatatgcggggtccgggaaggggtcccaccatttggtgtattgtacgcagtcttaccctga---tgtacacaagaggttgtttct 233  Q
    ||||||| |||| || |||||||||||||||||||||||||||||||||||| ||||| ||||||||||   | ||||||||||| |||||||    
T  24365081 agctcccacatacgcagggtccgggaaggggtcccaccatttggtgtattgttcgcagccttaccctgattttttacacaagaggctgtttct 24365173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 126 - 211
Target Start/End: Complemental strand, 10857960 - 10857875
Alignment:
Q  126 ggcaacccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccatttggtgtattgtacgcagtcttaccctg 211  Q
    ||||||||||||||||| |||||||||||| ||  ||||| ||||| |||||||||| |||||||||||| ||||| |||||||||    
T  10857960 ggcaacccggtgcactaaagctcccgcatacgcaaggtccaggaagtggtcccaccaattggtgtattgtgcgcagccttaccctg 10857875  T

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Target: chr8; HSP #28
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 126 - 210
Target Start/End: Original strand, 5135294 - 5135377
Alignment:
Q  126 ggcaacccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccatttggtgtattgtacgcagtcttaccct 210  Q
    |||| |||||||||| | |||||| ||||| || |||||||||||||||||||||||||||||||||||||| ||| ||||||||    
T  5135294 ggcagcccggtgcacaa-agctcctgcatacgcagggtccgggaaggggtcccaccatttggtgtattgtacacagccttaccct 5135377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 127 - 211
Target Start/End: Complemental strand, 5689761 - 5689677
Alignment:
Q  127 gcaacccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccatttggtgtattgtacgcagtcttaccctg 211  Q
    |||| ||||||||||| ||||||| |||| ||  ||| ||||||||||| ||||||||||||||||||||||||| |||||||||    
T  5689761 gcaaaccggtgcactaaagctcccacatacgcatggttcgggaaggggttccaccatttggtgtattgtacgcagccttaccctg 5689677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 131 - 232
Target Start/End: Original strand, 8483947 - 8484050
Alignment:
Q  131 cccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccatttggtgtattgtacgcagtcttaccctg--atgtacacaagaggttg 228  Q
    |||||||| ||| |||||||||||| || ||||| |||| |||||||||||| |||||||||||||||||| ||| |||||   | ||||||||||||||    
T  8483947 cccggtgccctaaagctcccgcatacgcagggtctgggatggggtcccaccaattggtgtattgtacgcagccttgccctgttttttacacaagaggttg 8484046  T
Q  229 tttc 232  Q
    ||||    
T  8484047 tttc 8484050  T

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Target: chr8; HSP #31
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 145 - 232
Target Start/End: Original strand, 20869523 - 20869608
Alignment:
Q  145 gctcccgcatatgcggggtccgggaaggggtcccaccatttggtgtattgtacgcagtcttaccctgatgtacacaagaggttgtttc 232  Q
    |||||||||||||| ||||||||||||||||| ||||  |||||||||||||| ||| ||||||||| | ||||||||||| ||||||    
T  20869523 gctcccgcatatgcagggtccgggaaggggtctcacc--ttggtgtattgtacacagccttaccctgttttacacaagaggctgtttc 20869608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 126 - 232
Target Start/End: Original strand, 18164764 - 18164871
Alignment:
Q  126 ggcaacccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccatttggtgtattgtacgcagtcttaccctg-atgtacacaagag 224  Q
    ||||||||||||||||| |||||||||||| || |||||||||||  |||| || | ||||||||||||||||||  |||||||||  | ||||||||||    
T  18164764 ggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaatggtcacatcctttggtgtattgtacgcaaccttaccctgtttttacacaagag 18164863  T
Q  225 gttgtttc 232  Q
    | ||||||    
T  18164864 gctgtttc 18164871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 126 - 201
Target Start/End: Complemental strand, 31457303 - 31457228
Alignment:
Q  126 ggcaacccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccatttggtgtattgtacgcag 201  Q
    ||||| |||||||||||||||||||||||| || ||||  |||||||||||| |||||||| ||||||||||||||    
T  31457303 ggcaatccggtgcactagagctcccgcatacgcagggtttgggaaggggtcctaccatttgatgtattgtacgcag 31457228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 126 - 189
Target Start/End: Complemental strand, 28407534 - 28407471
Alignment:
Q  126 ggcaacccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccatttggtg 189  Q
    |||||||||||||| || |||||||||||| |  ||||||||||||||||||||||||||||||    
T  28407534 ggcaacccggtgcagtaaagctcccgcatacgtagggtccgggaaggggtcccaccatttggtg 28407471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 132 - 211
Target Start/End: Complemental strand, 389770 - 389691
Alignment:
Q  132 ccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccatttggtgtattgtacgcagtcttaccctg 211  Q
    ||||||||||| ||||| |||||| || ||||| || ||||| ||||| ||||||||||||||||||||  |||||||||    
T  389770 ccggtgcactaaagctctcgcatacgcagggtcaggaaagggatcccatcatttggtgtattgtacgcaaccttaccctg 389691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 128 - 200
Target Start/End: Complemental strand, 16013585 - 16013511
Alignment:
Q  128 caacccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccacca--tttggtgtattgtacgca 200  Q
    ||||||||||||||| |||||||||||| || ||||| ||||||||||| |||||  ||| ||||||||||||||    
T  16013585 caacccggtgcactaaagctcccgcataggcagggtctgggaaggggtcgcaccatttttagtgtattgtacgca 16013511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 124 - 210
Target Start/End: Complemental strand, 26457860 - 26457776
Alignment:
Q  124 aaggcaacccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccatttggtgtattgtacgcagtcttaccct 210  Q
    |||| |||||||||||||| ||||||| |||| ||  |||| ||  ||||||||||||| |||||||||||||||||| ||||||||    
T  26457860 aaggaaacccggtgcactaaagctccctcatacgcaaggtcagg--aggggtcccaccaattggtgtattgtacgcagccttaccct 26457776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 135 - 232
Target Start/End: Original strand, 44781517 - 44781618
Alignment:
Q  135 gtgcactagagctcccgcatatgcggggtccgggaaggggtcccacca--tttggtgtattgtacgcagtcttaccctg--atgtacacaagaggttgtt 230  Q
    |||||||| |||||||||||| || ||||| |||| ||||||||| ||  ||||||||||||||| ||| |||||||||   | ||||||||||||||||    
T  44781517 gtgcactaaagctcccgcatacgcagggtctgggacggggtcccaacatttttggtgtattgtacacagccttaccctgtcttttacacaagaggttgtt 44781616  T
Q  231 tc 232  Q
    ||    
T  44781617 tc 44781618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 128 - 182
Target Start/End: Complemental strand, 27508039 - 27507985
Alignment:
Q  128 caacccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccacca 182  Q
    ||||||||||||||| |||||||||||| || |||| ||||||||||||||||||    
T  27508039 caacccggtgcactaaagctcccgcatacgcagggttcgggaaggggtcccacca 27507985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 126 - 211
Target Start/End: Original strand, 44742522 - 44742608
Alignment:
Q  126 ggcaacccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccattt-ggtgtattgtacgcagtcttaccctg 211  Q
    |||| ||||||||||||  ||||||||||  |  ||||||  |||||||||||||||||| |||||||||||||||| |||||||||    
T  44742522 ggcaccccggtgcactaatgctcccgcatccgtagggtccaagaaggggtcccaccattttggtgtattgtacgcagccttaccctg 44742608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 172 - 225
Target Start/End: Original strand, 23286375 - 23286428
Alignment:
Q  172 gggtcccaccatttggtgtattgtacgcagtcttaccctgatgtacacaagagg 225  Q
    ||||||||||||||||||||||||||||||  |||||||| | |||||||||||    
T  23286375 gggtcccaccatttggtgtattgtacgcagctttaccctgttttacacaagagg 23286428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 126 - 185
Target Start/End: Original strand, 35107315 - 35107374
Alignment:
Q  126 ggcaacccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccattt 185  Q
    ||||||||||||||||| |||| |||||||  | | ||||||||||||||||||||||||    
T  35107315 ggcaacccggtgcactaaagcttccgcatacacagcgtccgggaaggggtcccaccattt 35107374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 126 - 196
Target Start/End: Original strand, 23000232 - 23000293
Alignment:
Q  126 ggcaacccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccatttggtgtattgta 196  Q
    ||||||||||||||||| |||||||||||         |||||||||||||||||||||||||||||||||    
T  23000232 ggcaacccggtgcactaaagctcccgcat---------ccgggaaggggtcccaccatttggtgtattgta 23000293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 134 - 232
Target Start/End: Complemental strand, 22598279 - 22598180
Alignment:
Q  134 ggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccatttggtgtattgtacgcagtcttaccctg--atgtacacaagaggttgttt 231  Q
    ||||||||| || ||||||||| ||  |||||||||| ||||| ||||| ||||||||||||||  || |||||||||   | |||||||||||||||||    
T  22598279 ggtgcactaaag-tcccgcatacgcaaggtccgggaaagggtctcaccaattggtgtattgtacatagccttaccctgttttttacacaagaggttgttt 22598181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 126 - 171
Target Start/End: Original strand, 27468096 - 27468141
Alignment:
Q  126 ggcaacccggtgcactagagctcccgcatatgcggggtccgggaag 171  Q
    ||||||||||||||||| |||||||||||| || ||||||||||||    
T  27468096 ggcaacccggtgcactaaagctcccgcatacgcagggtccgggaag 27468141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 144 - 211
Target Start/End: Original strand, 14017990 - 14018058
Alignment:
Q  144 agctcccgcatatgcggggtccgggaaggggtcccacca-tttggtgtattgtacgcagtcttaccctg 211  Q
    |||| |||||| ||| |||||| ||||| |||||||||| ||| |||||||||||||||||| ||||||    
T  14017990 agctaccgcatctgcagggtccaggaagtggtcccaccaatttagtgtattgtacgcagtctcaccctg 14018058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 144 - 211
Target Start/End: Complemental strand, 24245562 - 24245492
Alignment:
Q  144 agctcccgcatatgcggggtccgggaaggggtcccacca---tttggtgtattgtacgcagtcttaccctg 211  Q
    |||||||||||| || |||||| |||||||||||||| |   ||||||| |||||||| ||||||||||||    
T  24245562 agctcccgcatacgcagggtccaggaaggggtcccacaattttttggtgcattgtacgtagtcttaccctg 24245492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 166 - 211
Target Start/End: Complemental strand, 43942417 - 43942370
Alignment:
Q  166 gggaaggggtcccaccattt--ggtgtattgtacgcagtcttaccctg 211  Q
    ||||||||||||||||||||  |||||||||||||||| |||||||||    
T  43942417 gggaaggggtcccaccatttttggtgtattgtacgcagccttaccctg 43942370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 206
Target Start/End: Original strand, 11000987 - 11001033
Alignment:
Q  160 gggtccgggaaggggtcccaccatttggtgtattgtacgcagtctta 206  Q
    |||| |||| |||||||||||||||||||||||||||| ||| ||||    
T  11000987 gggttcgggtaggggtcccaccatttggtgtattgtacacagcctta 11001033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 124 - 177
Target Start/End: Complemental strand, 18595971 - 18595918
Alignment:
Q  124 aaggcaacccggtgcactagagctcccgcatatgcggggtccgggaaggggtcc 177  Q
    ||||||||||| ||||||| | ||||||||||  | ||||||||||||||||||    
T  18595971 aaggcaacccgatgcactaaaactcccgcatacacagggtccgggaaggggtcc 18595918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 126 - 183
Target Start/End: Original strand, 36486570 - 36486627
Alignment:
Q  126 ggcaacccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccat 183  Q
    |||||||||| |||||| |||||| ||||| ||  ||||||||||| |||||||||||    
T  36486570 ggcaacccggggcactaaagctcctgcatacgcaaggtccgggaagaggtcccaccat 36486627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 199
Target Start/End: Original strand, 17250880 - 17250954
Alignment:
Q  126 ggcaacccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccat--ttggtgtattgtacgc 199  Q
    ||||||||| ||||||| ||||||  |||| || |||| |||||| ||||||||||||  ||||||||||||||||    
T  17250880 ggcaacccg-tgcactaaagctccttcatacgcagggttcgggaaagggtcccaccattattggtgtattgtacgc 17250954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 158
Target Start/End: Original strand, 23286341 - 23286373
Alignment:
Q  126 ggcaacccggtgcactagagctcccgcatatgc 158  Q
    |||| ||||||||||||||||||||||||||||    
T  23286341 ggcagcccggtgcactagagctcccgcatatgc 23286373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 160 - 207
Target Start/End: Complemental strand, 35106021 - 35105973
Alignment:
Q  160 gggtccgggaaggggtcccaccatt-tggtgtattgtacgcagtcttac 207  Q
    |||||| ||||| |||||||||||| ||||||||||||||||| |||||    
T  35106021 gggtccaggaagaggtcccaccattctggtgtattgtacgcagccttac 35105973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 83; Significance: 2e-39; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 126 - 232
Target Start/End: Complemental strand, 30708 - 30602
Alignment:
Q  126 ggcaacccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccatttggtgtattgtacgcagtcttaccctgatgtacacaagagg 225  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| | ||||||| | |||||||||||    
T  30708 ggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccctaccctgttttacacaagagg 30609  T
Q  226 ttgtttc 232  Q
     ||||||    
T  30608 ctgtttc 30602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 83; Significance: 2e-39; HSPs: 64)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 126 - 232
Target Start/End: Complemental strand, 1217241 - 1217135
Alignment:
Q  126 ggcaacccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccatttggtgtattgtacgcagtcttaccctgatgtacacaagagg 225  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||| ||||||||| | |||||||||||    
T  1217241 ggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccgccatttggtgtattgtacgcagccttaccctgttttacacaagagg 1217142  T
Q  226 ttgtttc 232  Q
     ||||||    
T  1217141 ctgtttc 1217135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 126 - 232
Target Start/End: Complemental strand, 31593000 - 31592894
Alignment:
Q  126 ggcaacccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccatttggtgtattgtacgcagtcttaccctgatgtacacaagagg 225  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||| ||||||||| | |||||||||||    
T  31593000 ggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggagtcccaccatttggtgtattgtacgcagccttaccctgttttacacaagagg 31592901  T
Q  226 ttgtttc 232  Q
     ||||||    
T  31592900 ctgtttc 31592894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 126 - 225
Target Start/End: Complemental strand, 15797373 - 15797274
Alignment:
Q  126 ggcaacccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccatttggtgtattgtacgcagtcttaccctgatgtacacaagagg 225  Q
    ||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||| | |||||||||||    
T  15797373 ggcaacccggtgcactagagctcccacatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgttttacacaagagg 15797274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 126 - 224
Target Start/End: Original strand, 22122921 - 22123019
Alignment:
Q  126 ggcaacccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccatttggtgtattgtacgcagtcttaccctgatgtacacaagag 224  Q
    ||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||| | ||||||||||    
T  22122921 ggcaacccggtgcactagagctctcgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgttttacacaagag 22123019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 126 - 232
Target Start/End: Complemental strand, 39203667 - 39203561
Alignment:
Q  126 ggcaacccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccatttggtgtattgtacgcagtcttaccctgatgtacacaagagg 225  Q
    ||||||||||||||||| |||||||||||||||  ||||||||||||||||||||||||||||||||||||||||  ||||||||| | |||||||||||    
T  39203667 ggcaacccggtgcactaaagctcccgcatatgcaaggtccgggaaggggtcccaccatttggtgtattgtacgcaaccttaccctgttttacacaagagg 39203568  T
Q  226 ttgtttc 232  Q
     ||||||    
T  39203567 ctgtttc 39203561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 126 - 211
Target Start/End: Original strand, 34771368 - 34771453
Alignment:
Q  126 ggcaacccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccatttggtgtattgtacgcagtcttaccctg 211  Q
    |||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  34771368 ggcagcccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctg 34771453  T

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Target: chr3; HSP #7
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 126 - 232
Target Start/End: Original strand, 40272816 - 40272924
Alignment:
Q  126 ggcaacccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccatttggtgtattgtacgcagtcttaccctg--atgtacacaaga 223  Q
    ||||||||||||||||| |||||||||||| || |||||||||||||||||||||||||||||||||||||||||| |||||||||   | |||||||||    
T  40272816 ggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgttttttacacaaga 40272915  T
Q  224 ggttgtttc 232  Q
    |||||||||    
T  40272916 ggttgtttc 40272924  T

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Target: chr3; HSP #8
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 126 - 211
Target Start/End: Original strand, 353353 - 353440
Alignment:
Q  126 ggcaacccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccat--ttggtgtattgtacgcagtcttaccctg 211  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||| |||||||||    
T  353353 ggcaacccggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctg 353440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 126 - 208
Target Start/End: Complemental strand, 54484844 - 54484762
Alignment:
Q  126 ggcaacccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccatttggtgtattgtacgcagtcttacc 208  Q
    ||||||||||||||||| |||||||||||| || |||||||||||||||||||||||||||||||||||||||||| ||||||    
T  54484844 ggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttacc 54484762  T

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Target: chr3; HSP #10
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 126 - 211
Target Start/End: Original strand, 13730606 - 13730693
Alignment:
Q  126 ggcaacccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccat--ttggtgtattgtacgcagtcttaccctg 211  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||  |||||||||||||| ||| |||||||||    
T  13730606 ggcaacccggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtattgtacacagccttaccctg 13730693  T

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Target: chr3; HSP #11
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 126 - 211
Target Start/End: Original strand, 49013477 - 49013564
Alignment:
Q  126 ggcaacccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccat--ttggtgtattgtacgcagtcttaccctg 211  Q
    ||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||  |||||||||||||||||| |||||||||    
T  49013477 ggcaacccggtgcactaaagctcccgcgtatgcggggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctg 49013564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 126 - 232
Target Start/End: Complemental strand, 22609918 - 22609811
Alignment:
Q  126 ggcaacccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccatttggtgtattgtacgcagtcttaccctg-atgtacacaagag 224  Q
    ||||||||||||||||  |||||||||||| ||  ||||||||||||||||||||||||||||||||||||||||| |||||||||  | ||||||||||    
T  22609918 ggcaacccggtgcactgaagctcccgcatacgcaaggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttttacacaagag 22609819  T
Q  225 gttgtttc 232  Q
    | ||||||    
T  22609818 gctgtttc 22609811  T

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Target: chr3; HSP #13
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 128 - 225
Target Start/End: Complemental strand, 26292481 - 26292384
Alignment:
Q  128 caacccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccatttggtgtattgtacgcagtcttaccctgatgtacacaagagg 225  Q
    |||||||||||||||||| |||||||||||| |||| ||||||||| ||||| |||||||||||| |||||| ||||||||||| | |||||||||||    
T  26292481 caacccggtgcactagagttcccgcatatgcagggttcgggaagggatcccatcatttggtgtatcgtacgcggtcttaccctgttttacacaagagg 26292384  T

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Target: chr3; HSP #14
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 126 - 211
Target Start/End: Original strand, 13628794 - 13628881
Alignment:
Q  126 ggcaacccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccat--ttggtgtattgtacgcagtcttaccctg 211  Q
    ||||||||||||||||| |||||||||||| || ||||||||||||||||||||||||  |||||||||||||||||| |||||||||    
T  13628794 ggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctg 13628881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 126 - 211
Target Start/End: Complemental strand, 26869859 - 26869774
Alignment:
Q  126 ggcaacccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccatttggtgtattgtacgcagtcttaccctg 211  Q
    ||||||||||||||| | |||||||||||| ||  ||||||| ||||||||||||||||||||||||||||||||| |||||||||    
T  26869859 ggcaacccggtgcaccaaagctcccgcatacgcatggtccggcaaggggtcccaccatttggtgtattgtacgcagccttaccctg 26869774  T

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Target: chr3; HSP #16
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 126 - 207
Target Start/End: Original strand, 52926223 - 52926304
Alignment:
Q  126 ggcaacccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccatttggtgtattgtacgcagtcttac 207  Q
    ||||||||||||| ||| |||||||||||| || ||||||||||||| |||||||||||||||||||||||||||| |||||    
T  52926223 ggcaacccggtgcgctaaagctcccgcatacgcagggtccgggaaggtgtcccaccatttggtgtattgtacgcagccttac 52926304  T

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Target: chr3; HSP #17
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 126 - 211
Target Start/End: Original strand, 12914039 - 12914124
Alignment:
Q  126 ggcaacccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccatttggtgtattgtacgcagtcttaccctg 211  Q
    |||||||||||||| |  ||||||||||||||| ||||| ||||||||||| |||||||||||||||||||||| | |||||||||    
T  12914039 ggcaacccggtgcattgaagctcccgcatatgcagggtctgggaaggggtctcaccatttggtgtattgtacgccgccttaccctg 12914124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 129 - 211
Target Start/End: Complemental strand, 14987109 - 14987025
Alignment:
Q  129 aacccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccat--ttggtgtattgtacgcagtcttaccctg 211  Q
    |||||||||||||| |||||||||||||||  |||||||||| ||||||||||||  |||||||||||||||||| |||||||||    
T  14987109 aacccggtgcactaaagctcccgcatatgcaaggtccgggaatgggtcccaccattattggtgtattgtacgcagccttaccctg 14987025  T

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Target: chr3; HSP #19
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 126 - 211
Target Start/End: Complemental strand, 16735593 - 16735508
Alignment:
Q  126 ggcaacccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccatttggtgtattgtacgcagtcttaccctg 211  Q
    |||||||| |||||||  |||| ||||||| || | |||||||||||||||||||||||||||||||||||||||| |||||||||    
T  16735593 ggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctg 16735508  T

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Target: chr3; HSP #20
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 126 - 211
Target Start/End: Original strand, 29366724 - 29366811
Alignment:
Q  126 ggcaacccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccat--ttggtgtattgtacgcagtcttaccctg 211  Q
    |||||||| |||||||| ||||||| |||| || ||||||||||||||||||||||||  |||||||||||||||||| |||||||||    
T  29366724 ggcaacccagtgcactaaagctcccacatacgcagggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctg 29366811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 126 - 182
Target Start/End: Complemental strand, 30452948 - 30452892
Alignment:
Q  126 ggcaacccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccacca 182  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  30452948 ggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccacca 30452892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 126 - 211
Target Start/End: Original strand, 45786218 - 45786305
Alignment:
Q  126 ggcaacccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccacca--tttggtgtattgtacgcagtcttaccctg 211  Q
    ||||||||||||||||| |||||| ||||  || |||||||||||||||||||||||  ||||||||||||||||||| |||||||||    
T  45786218 ggcaacccggtgcactaaagctccagcattcgcagggtccgggaaggggtcccaccatttttggtgtattgtacgcagccttaccctg 45786305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 133 - 231
Target Start/End: Original strand, 6411833 - 6411932
Alignment:
Q  133 cggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccatttggtgtattgtacgcagtcttaccctg-atgtacacaagaggttgttt 231  Q
    |||||||||| |||||||||||| ||  |||| |||||||||||||| ||||||||||||||||||||| |||||||||  | ||||||||||| |||||    
T  6411833 cggtgcactaaagctcccgcatacgcaaggtctgggaaggggtcccatcatttggtgtattgtacgcagccttaccctgtttttacacaagaggctgttt 6411932  T

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Target: chr3; HSP #24
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 129 - 224
Target Start/End: Original strand, 7696899 - 7696989
Alignment:
Q  129 aacccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccatttggtgtattgtacgcagtcttaccctgatgtacacaagag 224  Q
    |||||||||||||||||||||| ||||||| | |||||||||||||     |||||||||||||||||||||| ||||||||| | ||||||||||    
T  7696899 aacccggtgcactagagctcccacatatgcagtgtccgggaagggg-----ccatttggtgtattgtacgcagccttaccctgttttacacaagag 7696989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 124 - 211
Target Start/End: Complemental strand, 7943145 - 7943058
Alignment:
Q  124 aaggcaacccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccatttggtgtattgtacgcagtcttaccctg 211  Q
    |||||||||| |||||||| |||||||||||| ||  |||| || ||||| |||||||||||| ||||||||||||||||||||||||    
T  7943145 aaggcaacccagtgcactaaagctcccgcatacgcatggtctggaaagggatcccaccatttgatgtattgtacgcagtcttaccctg 7943058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 126 - 201
Target Start/End: Original strand, 25517174 - 25517249
Alignment:
Q  126 ggcaacccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccatttggtgtattgtacgcag 201  Q
    ||||||||||||||||| |||||| ||||| || || ||||||||||||||||||||||| |||||||||||||||    
T  25517174 ggcaacccggtgcactaaagctccagcatacgcaggatccgggaaggggtcccaccattttgtgtattgtacgcag 25517249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 132 - 232
Target Start/End: Original strand, 45948848 - 45948950
Alignment:
Q  132 ccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccatttggtgtattgtacgcagtcttaccc--tgatgtacacaagaggttgt 229  Q
    ||||||||||| |||||||||||| || ||||||| ||||||||||||||| ||||||||||||| |||| |||||||  |  | |||||||||||||||    
T  45948848 ccggtgcactaaagctcccgcatacgcagggtccgagaaggggtcccaccaattggtgtattgtatgcagccttaccctattttttacacaagaggttgt 45948947  T
Q  230 ttc 232  Q
    |||    
T  45948948 ttc 45948950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 126 - 188
Target Start/End: Original strand, 24851305 - 24851367
Alignment:
Q  126 ggcaacccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccatttggt 188  Q
    ||||||||||||||||| ||||||||||||||| || ||||||||||||||||||||||||||    
T  24851305 ggcaacccggtgcactaaagctcccgcatatgcaggatccgggaaggggtcccaccatttggt 24851367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 134 - 232
Target Start/End: Original strand, 54374357 - 54374458
Alignment:
Q  134 ggtgcactagagctcccgcatatgcggggtccgggaaggggtcccacca-tttggtgtattgtacgcagtcttaccc--tgatgtacacaagaggttgtt 230  Q
    |||| |||| ||||||||||||||| ||||||||||||||||||||||| ||||||| ||||||||||| |||||||  |  | ||||||||||||||||    
T  54374357 ggtgaactaaagctcccgcatatgcagggtccgggaaggggtcccaccattttggtggattgtacgcagccttaccctattttttacacaagaggttgtt 54374456  T
Q  231 tc 232  Q
    ||    
T  54374457 tc 54374458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 134 - 211
Target Start/End: Complemental strand, 26573272 - 26573195
Alignment:
Q  134 ggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccatttggtgtattgtacgcagtcttaccctg 211  Q
    ||||||||| ||||| |||||| || |||||||||| |||||||||||| |||||||||||||||||| |||||||||    
T  26573272 ggtgcactaaagctcacgcatacgcagggtccgggatggggtcccaccaattggtgtattgtacgcagccttaccctg 26573195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 126 - 211
Target Start/End: Original strand, 46421038 - 46421126
Alignment:
Q  126 ggcaacccggtgcact-agagctcccgcatatgcggggtccgggaaggggtcccaccat--ttggtgtattgtacgcagtcttaccctg 211  Q
    ||||| |||||||||| | |||||||||||| || ||||||||||||||||||||||||  |||||||||||||||||| |||||||||    
T  46421038 ggcaaaccggtgcacttaaagctcccgcatacgcagggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctg 46421126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 126 - 211
Target Start/End: Original strand, 10795427 - 10795514
Alignment:
Q  126 ggcaacccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccacca--tttggtgtattgtacgcagtcttaccctg 211  Q
    ||||||| ||||||||  |||||||||||| || |||||| ||||||||||||||||  ||||||||||||||||||| |||||||||    
T  10795427 ggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctg 10795514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 160 - 231
Target Start/End: Complemental strand, 47624160 - 47624088
Alignment:
Q  160 gggtccgggaaggggtcccaccatttggtgtattgtacgcagtcttaccctg-atgtacacaagaggttgttt 231  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||  | ||||||||||| |||||    
T  47624160 gggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttttacacaagaggctgttt 47624088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 126 - 232
Target Start/End: Original strand, 53996569 - 53996678
Alignment:
Q  126 ggcaacccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccacca-tttggtgtattgtacgcagtcttaccctg--atgtacacaag 222  Q
    |||| |||||||||||| ||||||| |||| || | ||| ||||||||||||||||| |||||||||||||| |||| |||||||||   | ||||||||    
T  53996569 ggcagcccggtgcactaaagctcccacatacgcagtgtcagggaaggggtcccaccattttggtgtattgtaagcagccttaccctgttttttacacaag 53996668  T
Q  223 aggttgtttc 232  Q
    ||||||||||    
T  53996669 aggttgtttc 53996678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 139 - 211
Target Start/End: Complemental strand, 9607345 - 9607271
Alignment:
Q  139 actagagctcccgcatatgcggggtccgggaaggggtcccaccat--ttggtgtattgtacgcagtcttaccctg 211  Q
    |||| ||||||||||||||||||||| |||||||||||||| |||  |||||||||| ||||||| |||||||||    
T  9607345 actaaagctcccgcatatgcggggtctgggaaggggtcccaacattattggtgtattctacgcagccttaccctg 9607271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 126 - 197
Target Start/End: Complemental strand, 24577988 - 24577917
Alignment:
Q  126 ggcaacccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccatttggtgtattgtac 197  Q
    ||||| |||||||||||||||||||| |||||| ||||| ||||| || ||||||||||| |||||||||||    
T  24577988 ggcaatccggtgcactagagctcccgtatatgcagggtctgggaaaggatcccaccatttagtgtattgtac 24577917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 126 - 197
Target Start/End: Complemental strand, 24578078 - 24578007
Alignment:
Q  126 ggcaacccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccatttggtgtattgtac 197  Q
    |||||||||||||||||||| |||||||||||  ||||| ||||| | |||||||||||| |||||||||||    
T  24578078 ggcaacccggtgcactagagttcccgcatatgtagggtctgggaaagagtcccaccatttagtgtattgtac 24578007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 126 - 211
Target Start/End: Complemental strand, 516565 - 516477
Alignment:
Q  126 ggcaacccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccacca---tttggtgtattgtacgcagtcttaccctg 211  Q
    ||||||||||||||||| |||||||||||| || ||||| ||||||||||||| |||   |||||| |||||| ||||| |||||||||    
T  516565 ggcaacccggtgcactaaagctcccgcatacgcagggtcggggaaggggtcccgccattttttggtttattgtgcgcagccttaccctg 516477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 138 - 211
Target Start/End: Complemental strand, 33926224 - 33926150
Alignment:
Q  138 cactagagctcccgcatatgcggggtccgggaaggggtcccaccatt-tggtgtattgtacgcagtcttaccctg 211  Q
    ||||| ||||| ||||||||| |||||| |||||||||||||||||| ||||||||||||| ||| |||||||||    
T  33926224 cactaaagctctcgcatatgcagggtccaggaaggggtcccaccattatggtgtattgtacacagccttaccctg 33926150  T

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Target: chr3; HSP #40
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 132 - 200
Target Start/End: Original strand, 829452 - 829521
Alignment:
Q  132 ccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccacca-tttggtgtattgtacgca 200  Q
    ||||||||||| |||||| ||||| || |||| |||||||||||||||||| ||||||||||||||||||    
T  829452 ccggtgcactaaagctcctgcatacgcagggttcgggaaggggtcccaccattttggtgtattgtacgca 829521  T

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Target: chr3; HSP #41
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 126 - 211
Target Start/End: Original strand, 8247690 - 8247778
Alignment:
Q  126 ggcaacccggtgcact-agagctcccgcatatgcggggtccgggaaggggtcccaccat--ttggtgtattgtacgcagtcttaccctg 211  Q
    |||||||| ||||||| | |||||||||||| || ||||||||||||| ||||||||||  |||||||||||||||||  |||||||||    
T  8247690 ggcaacccagtgcacttaaagctcccgcatacgcagggtccgggaaggagtcccaccattattggtgtattgtacgcaaccttaccctg 8247778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 135 - 211
Target Start/End: Original strand, 34420656 - 34420733
Alignment:
Q  135 gtgcactagagctcccgcatatgcggggtccgggaaggggtcccacca-tttggtgtattgtacgcagtcttaccctg 211  Q
    |||||||| ||||||| |||| ||  |||||||||||||||||||||| |||||||||| |||||||| |||||||||    
T  34420656 gtgcactaaagctcccacatacgcaaggtccgggaaggggtcccaccattttggtgtatggtacgcagccttaccctg 34420733  T

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Target: chr3; HSP #43
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 126 - 187
Target Start/End: Complemental strand, 35418057 - 35417996
Alignment:
Q  126 ggcaacccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccatttgg 187  Q
    |||| |||| ||||||| ||||| ||||| ||||||||||||||||||||||||||||||||    
T  35418057 ggcagcccgatgcactaaagctctcgcatttgcggggtccgggaaggggtcccaccatttgg 35417996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 147 - 211
Target Start/End: Complemental strand, 9276395 - 9276332
Alignment:
Q  147 tcccgcatatgcggggtccgggaaggggtcccaccatttggtgtattgtacgcagtcttaccctg 211  Q
    ||||||||| || ||||||||||| |||||| ||||||||||||||||||||||| |||||||||    
T  9276395 tcccgcatacgcagggtccgggaaagggtcc-accatttggtgtattgtacgcagccttaccctg 9276332  T

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Target: chr3; HSP #45
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 126 - 185
Target Start/End: Original strand, 5173723 - 5173782
Alignment:
Q  126 ggcaacccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccattt 185  Q
    ||||||||||||||||| |||||||||||| ||  |||||||||||||| ||||||||||    
T  5173723 ggcaacccggtgcactaaagctcccgcatacgcaaggtccgggaaggggccccaccattt 5173782  T

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Target: chr3; HSP #46
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 126 - 232
Target Start/End: Complemental strand, 31831339 - 31831244
Alignment:
Q  126 ggcaacccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccatttggtgtattgtacgcagtcttaccctgatgtacacaagagg 225  Q
    ||||||||||||||||||||| ||||||||||| ||||||||           |||||||||||||||||| |||| ||||||||  | |||||||||||    
T  31831339 ggcaacccggtgcactagagcacccgcatatgcagggtccgg-----------accatttggtgtattgtatgcagccttaccctattttacacaagagg 31831251  T

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Target: chr3; HSP #47
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 171 - 211
Target Start/End: Original strand, 31904906 - 31904946
Alignment:
Q  171 ggggtcccaccatttggtgtattgtacgcagtcttaccctg 211  Q
    ||||||||||||||||||||||||||||||||| |||||||    
T  31904906 ggggtcccaccatttggtgtattgtacgcagtcataccctg 31904946  T

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Target: chr3; HSP #48
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 124 - 211
Target Start/End: Complemental strand, 55401332 - 55401244
Alignment:
Q  124 aaggcaacccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccacca-tttggtgtattgtacgcagtcttaccctg 211  Q
    |||||| |||||||||  | |||||||||||| |   |||||| ||||||||||||||| ||||||||||| |||||||||||| ||||    
T  55401332 aaggcagcccggtgcaaaaaagctcccgcatacggaaggtccgagaaggggtcccaccattttggtgtattatacgcagtcttaacctg 55401244  T

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Target: chr3; HSP #49
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 172 - 211
Target Start/End: Original strand, 4495714 - 4495753
Alignment:
Q  172 gggtcccaccatttggtgtattgtacgcagtcttaccctg 211  Q
    |||||||||||||||||||||||||||||| |||||||||    
T  4495714 gggtcccaccatttggtgtattgtacgcagccttaccctg 4495753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 126 - 177
Target Start/End: Original strand, 10484620 - 10484671
Alignment:
Q  126 ggcaacccggtgcactagagctcccgcatatgcggggtccgggaaggggtcc 177  Q
    ||||||||||||||||| |||||||||||| || |||||| |||||||||||    
T  10484620 ggcaacccggtgcactaaagctcccgcatacgcagggtccaggaaggggtcc 10484671  T

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Target: chr3; HSP #51
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 126 - 168
Target Start/End: Original strand, 6242289 - 6242331
Alignment:
Q  126 ggcaacccggtgcactagagctcccgcatatgcggggtccggg 168  Q
    |||||||||||||||||||||||| |||||||| |||||||||    
T  6242289 ggcaacccggtgcactagagctcctgcatatgcagggtccggg 6242331  T

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Target: chr3; HSP #52
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 144 - 193
Target Start/End: Original strand, 30928169 - 30928218
Alignment:
Q  144 agctcccgcatatgcggggtccgggaaggggtcccaccatttggtgtatt 193  Q
    ||||||| ||||||| ||||||||||||||||||| ||| ||||||||||    
T  30928169 agctcccacatatgcagggtccgggaaggggtcccgccaattggtgtatt 30928218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 170 - 211
Target Start/End: Complemental strand, 33235641 - 33235600
Alignment:
Q  170 aggggtcccaccatttggtgtattgtacgcagtcttaccctg 211  Q
    |||||||||||||||| ||||||||||| |||||||||||||    
T  33235641 aggggtcccaccatttagtgtattgtacacagtcttaccctg 33235600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 136 - 196
Target Start/End: Original strand, 43114882 - 43114942
Alignment:
Q  136 tgcactagagctcccgcatatgc-ggggtccgggaaggggtcccaccatttggtgtattgta 196  Q
    ||||||| |||||||||||| || ||||||| ||||||| ||||||||||||||||||||||    
T  43114882 tgcactaaagctcccgcatacgcaggggtccaggaaggg-tcccaccatttggtgtattgta 43114942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 124 - 185
Target Start/End: Original strand, 44403557 - 44403618
Alignment:
Q  124 aaggcaacccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccattt 185  Q
    |||||| |||||||||||| |||| | ||||| |  ||||||||||||||||||||||||||    
T  44403557 aaggcagcccggtgcactaaagcttcagcatacgtagggtccgggaaggggtcccaccattt 44403618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 161 - 232
Target Start/End: Original strand, 45139515 - 45139590
Alignment:
Q  161 ggtccgggaaggggtcccacca--tttggtgtattgtacgcagtcttaccc--tgatgtacacaagaggttgtttc 232  Q
    |||| |||||||||||||||||  |||||||||||||| |||| |||||||  || | ||||||||||||||||||    
T  45139515 ggtctgggaaggggtcccaccatttttggtgtattgtatgcagccttaccctgtgttttacacaagaggttgtttc 45139590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 144 - 193
Target Start/End: Original strand, 46169989 - 46170038
Alignment:
Q  144 agctcccgcatatgcggggtccgggaaggggtcccaccatttggtgtatt 193  Q
    ||||||| ||||||| |||||||||||||||||| |||||||||| ||||    
T  46169989 agctcccacatatgcagggtccgggaaggggtcctaccatttggtttatt 46170038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 134 - 197
Target Start/End: Complemental strand, 25944615 - 25944551
Alignment:
Q  134 ggtgcactagagctcccgcatatgcggggtccgggaaggggtcccacca-tttggtgtattgtac 197  Q
    ||||| ||| ||||||| |||| || ||||| ||||||||||||||||| |||||||||||||||    
T  25944615 ggtgcgctaaagctcccacatacgcagggtcagggaaggggtcccaccattttggtgtattgtac 25944551  T

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Target: chr3; HSP #59
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 126 - 170
Target Start/End: Complemental strand, 47624252 - 47624208
Alignment:
Q  126 ggcaacccggtgcactagagctcccgcatatgcggggtccgggaa 170  Q
    ||||||||||||||||| |||||||||||| || |||||||||||    
T  47624252 ggcaacccggtgcactaaagctcccgcatacgcagggtccgggaa 47624208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 172 - 232
Target Start/End: Original strand, 54032609 - 54032671
Alignment:
Q  172 gggtcccaccatttggtgtattgtacgcagtcttaccctg--atgtacacaagaggttgtttc 232  Q
    ||||||||||||| ||||||||||| |||| |||||||||   | ||||||||||||||||||    
T  54032609 gggtcccaccattcggtgtattgtatgcagccttaccctgttttttacacaagaggttgtttc 54032671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 200
Target Start/End: Complemental strand, 19731155 - 19731081
Alignment:
Q  126 ggcaacccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccatttggtgtattgtacgca 200  Q
    |||| |||||||||||| |||||| |||||  | | ||| ||||| ||||||||||| | |||||||||||||||    
T  19731155 ggcagcccggtgcactaaagctcctgcatacacagagtctgggaaagggtcccaccaataggtgtattgtacgca 19731081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 126 - 199
Target Start/End: Original strand, 50624957 - 50625030
Alignment:
Q  126 ggcaacccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccatttggtgtattgtacgc 199  Q
    |||| |||||||||||| ||||||| | || || ||| || |||||| |||||||||  |||||||||||||||    
T  50624957 ggcagcccggtgcactaaagctcccacttacgcagggcccaggaaggcgtcccaccaaatggtgtattgtacgc 50625030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 175 - 211
Target Start/End: Original strand, 45620881 - 45620917
Alignment:
Q  175 tcccaccatttggtgtattgtacgcagtcttaccctg 211  Q
    |||||||| |||||||||||||||||| |||||||||    
T  45620881 tcccaccaattggtgtattgtacgcagccttaccctg 45620917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 171 - 211
Target Start/End: Original strand, 52428526 - 52428566
Alignment:
Q  171 ggggtcccaccatttggtgtattgtacgcagtcttaccctg 211  Q
    ||||| |||| |||||||||||||||||||| |||||||||    
T  52428526 ggggttccactatttggtgtattgtacgcagccttaccctg 52428566  T

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Target: chr2 (Bit Score: 80; Significance: 1e-37; HSPs: 66)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 126 - 225
Target Start/End: Original strand, 21779265 - 21779364
Alignment:
Q  126 ggcaacccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccatttggtgtattgtacgcagtcttaccctgatgtacacaagagg 225  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||  ||||||||| | |||||||||||    
T  21779265 ggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcaaccttaccctgttttacacaagagg 21779364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 126 - 232
Target Start/End: Complemental strand, 9671310 - 9671204
Alignment:
Q  126 ggcaacccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccatttggtgtattgtacgcagtcttaccctgatgtacacaagagg 225  Q
    ||||||||||||||||| |||||||||||| || |||||||||||||||||||||||||||||||||||||||||| ||||||||| | |||||||||||    
T  9671310 ggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgttttacacaagagg 9671211  T
Q  226 ttgtttc 232  Q
     ||||||    
T  9671210 ctgtttc 9671204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 126 - 232
Target Start/End: Complemental strand, 23397895 - 23397789
Alignment:
Q  126 ggcaacccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccatttggtgtattgtacgcagtcttaccctgatgtacacaagagg 225  Q
    ||||||||||||||||||||||||||||||||  ||||||| ||||||||||||||||||||||||||||||| || ||||||||  | |||||||||||    
T  23397895 ggcaacccggtgcactagagctcccgcatatgtagggtccgagaaggggtcccaccatttggtgtattgtacgtagccttaccctattttacacaagagg 23397796  T
Q  226 ttgtttc 232  Q
     ||||||    
T  23397795 ctgtttc 23397789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 126 - 211
Target Start/End: Complemental strand, 10546294 - 10546209
Alignment:
Q  126 ggcaacccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccatttggtgtattgtacgcagtcttaccctg 211  Q
    ||||||||||||||||| |||||||||||| || |||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  10546294 ggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctg 10546209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 126 - 211
Target Start/End: Original strand, 8455320 - 8455405
Alignment:
Q  126 ggcaacccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccatttggtgtattgtacgcagtcttaccctg 211  Q
    ||||||||||||||||| |||||| ||||| || |||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  8455320 ggcaacccggtgcactaaagctccggcatacgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctg 8455405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 126 - 232
Target Start/End: Complemental strand, 36871622 - 36871516
Alignment:
Q  126 ggcaacccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccatttggtgtattgtacgcagtcttaccctgatgt-acacaagag 224  Q
    ||||||||||||||||| |||||||||||| || || ||||||||||||||||||||||||||||||||||||||| ||||||||| | | |||||||||    
T  36871622 ggcaacccggtgcactaaagctcccgcatacgcagg-tccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgttttcacacaagag 36871524  T
Q  225 gttgtttc 232  Q
    | ||||||    
T  36871523 gctgtttc 36871516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 126 - 211
Target Start/End: Complemental strand, 10543831 - 10543744
Alignment:
Q  126 ggcaacccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccacca--tttggtgtattgtacgcagtcttaccctg 211  Q
    ||||||||||||||||| |||||||||||| || |||||||||||||||||||||||  ||||||||||||||||||| |||||||||    
T  10543831 ggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccatttttggtgtattgtacgcagccttaccctg 10543744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 126 - 232
Target Start/End: Complemental strand, 14444859 - 14444752
Alignment:
Q  126 ggcaacccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccatttggtgtattgtacgcagtcttaccctg-atgtacacaagag 224  Q
    ||||||| ||||||||| |||||||||||| || ||||||||||||||||||||||||||||||||| |||| ||| |||||||||  | ||||||||||    
T  14444859 ggcaacctggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccatttggtgtatcgtacacagccttaccctgtttttacacaagag 14444760  T
Q  225 gttgtttc 232  Q
    | ||||||    
T  14444759 gctgtttc 14444752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 126 - 224
Target Start/End: Original strand, 25249742 - 25249841
Alignment:
Q  126 ggcaacccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccatttggtgtattgtacgcagtcttaccctg-atgtacacaagag 224  Q
    ||||||||||||||||| ||||| |||||| || |||| ||||||||| ||||||||||||||||||||||||||| |||||||||  ||||||||||||    
T  25249742 ggcaacccggtgcactaaagctcacgcatacgcagggttcgggaagggatcccaccatttggtgtattgtacgcagccttaccctgtttgtacacaagag 25249841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 126 - 211
Target Start/End: Complemental strand, 14530451 - 14530364
Alignment:
Q  126 ggcaacccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccat--ttggtgtattgtacgcagtcttaccctg 211  Q
    ||||||||||||||||| |||||||||||| || ||||||||||||||||||||||||  ||||||||||||||| || |||||||||    
T  14530451 ggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccattattggtgtattgtacgtagccttaccctg 14530364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 126 - 210
Target Start/End: Complemental strand, 5841161 - 5841075
Alignment:
Q  126 ggcaacccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccat--ttggtgtattgtacgcagtcttaccct 210  Q
    |||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||  ||| |||||||||||||  ||||||||    
T  5841161 ggcaactcggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattgatgtattgtacgcatccttaccct 5841075  T

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Target: chr2; HSP #12
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 144 - 232
Target Start/End: Original strand, 32781310 - 32781400
Alignment:
Q  144 agctcccgcatatgcggggtccgggaaggggtcccaccatttggtgtattgtacgcagtcttaccctg--atgtacacaagaggttgtttc 232  Q
    ||||||||||||  | ||||| ||||||||||||||||||||||||||||||||||||||||||||||   | ||||||||||||||||||    
T  32781310 agctcccgcatacacagggtctgggaaggggtcccaccatttggtgtattgtacgcagtcttaccctgttttttacacaagaggttgtttc 32781400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 126 - 232
Target Start/End: Complemental strand, 17623695 - 17623587
Alignment:
Q  126 ggcaacccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccatttggtgtattgtacgcagtcttaccctga--tgtacacaaga 223  Q
    |||||||| |||||||| |||| || |||| || || | ||||||||||| ||||||||||||||||||||||||| ||||||||||  | |||||||||    
T  17623695 ggcaacccagtgcactaaagcttccacatacgcaggattcgggaaggggttccaccatttggtgtattgtacgcagccttaccctgatttttacacaaga 17623596  T
Q  224 ggttgtttc 232  Q
    |||||||||    
T  17623595 ggttgtttc 17623587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 126 - 232
Target Start/End: Complemental strand, 17668133 - 17668025
Alignment:
Q  126 ggcaacccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccatttggtgtattgtacgcagtcttaccctga--tgtacacaaga 223  Q
    ||||||||||||||||| |||||||  ||| || |||| || |||||||| ||||||||||||||||||||||||| ||||||||||  | |||||||||    
T  17668133 ggcaacccggtgcactaaagctcccatatacgcagggttcgagaaggggttccaccatttggtgtattgtacgcagccttaccctgatttttacacaaga 17668034  T
Q  224 ggttgtttc 232  Q
    |||| ||||    
T  17668033 ggttctttc 17668025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 126 - 233
Target Start/End: Original strand, 25079721 - 25079831
Alignment:
Q  126 ggcaacccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccatttggtgtattgtacgcagtcttaccctg---atgtacacaag 222  Q
    ||||||||||||||||| |||||  ||||| || ||||||||||||||||||||||||| |||||||||||||||  |||||| ||    | ||||||||    
T  25079721 ggcaacccggtgcactaaagctcttgcatacgcagggtccgggaaggggtcccaccattcggtgtattgtacgcatccttaccttgtttttttacacaag 25079820  T
Q  223 aggttgtttct 233  Q
    |||||||||||    
T  25079821 aggttgtttct 25079831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 126 - 209
Target Start/End: Original strand, 40762238 - 40762321
Alignment:
Q  126 ggcaacccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccatttggtgtattgtacgcagtcttaccc 209  Q
    ||||||||||||||||| ||||||| |||| || |||||| |||| ||||||||||||||||||||||||||| || |||||||    
T  40762238 ggcaacccggtgcactaaagctcccacatacgcagggtccaggaaagggtcccaccatttggtgtattgtacgtagccttaccc 40762321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 126 - 207
Target Start/End: Complemental strand, 11514566 - 11514486
Alignment:
Q  126 ggcaacccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccatttggtgtattgtacgcagtcttac 207  Q
    ||||| ||||||||||| |||||||||||| || ||||| |||||||| ||||||||||||||||||||||||||| |||||    
T  11514566 ggcaatccggtgcactaaagctcccgcatacgcagggtctgggaaggg-tcccaccatttggtgtattgtacgcagccttac 11514486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 124 - 201
Target Start/End: Original strand, 24859990 - 24860067
Alignment:
Q  124 aaggcaacccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccatttggtgtattgtacgcag 201  Q
    ||||||| ||||||||||| |||||||||||| || ||||||| |||||||| | |||||||||||||||||||||||    
T  24859990 aaggcaatccggtgcactaaagctcccgcatacgcagggtccgagaaggggttctaccatttggtgtattgtacgcag 24860067  T

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Target: chr2; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 124 - 173
Target Start/End: Original strand, 39189506 - 39189555
Alignment:
Q  124 aaggcaacccggtgcactagagctcccgcatatgcggggtccgggaaggg 173  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39189506 aaggcaacccggtgcactagagctcccgcatatgcggggtccgggaaggg 39189555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 126 - 210
Target Start/End: Complemental strand, 17896391 - 17896307
Alignment:
Q  126 ggcaacccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccatttggtgtattgtacgcagtcttaccct 210  Q
    |||||| || ||||||| ||||||| |||| || ||||||| ||||||||||||||||||||| |||||||||||| ||||||||    
T  17896391 ggcaactcgatgcactaaagctcccacatacgcagggtccgagaaggggtcccaccatttggtatattgtacgcagccttaccct 17896307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 160 - 211
Target Start/End: Complemental strand, 22371151 - 22371100
Alignment:
Q  160 gggtccgggaaggggtcccaccatttggtgtattgtacgcagtcttaccctg 211  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  22371151 gggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctg 22371100  T

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Target: chr2; HSP #22
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 126 - 208
Target Start/End: Original strand, 13245099 - 13245181
Alignment:
Q  126 ggcaacccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccatttggtgtattgtacgcagtcttacc 208  Q
    ||||||||| | ||||| |||||||| ||||||  ||||||||||||||||||||||||| ||||| ||||||||| ||||||    
T  13245099 ggcaacccgatacactaaagctcccgtatatgcatggtccgggaaggggtcccaccatttagtgtaatgtacgcagccttacc 13245181  T

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Target: chr2; HSP #23
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 160 - 232
Target Start/End: Original strand, 12023957 - 12024030
Alignment:
Q  160 gggtccgggaaggggtcccaccatttggtgtattgtacgcagtcttaccctg-atgtacacaagaggttgtttc 232  Q
    |||||||||| ||||||||||||||||||||||||||||||| |||||||||  | ||||||||||| ||||||    
T  12023957 gggtccgggagggggtcccaccatttggtgtattgtacgcagccttaccctgtttttacacaagaggctgtttc 12024030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 135 - 208
Target Start/End: Complemental strand, 24890533 - 24890460
Alignment:
Q  135 gtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccatttggtgtattgtacgcagtcttacc 208  Q
    |||||||| |||||| ||||| || ||||||||||||||||||||||| ||||||||||||| |||| ||||||    
T  24890533 gtgcactaaagctcctgcatacgcagggtccgggaaggggtcccaccaattggtgtattgtatgcagccttacc 24890460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 126 - 211
Target Start/End: Complemental strand, 25632640 - 25632555
Alignment:
Q  126 ggcaacccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccatttggtgtattgtacgcagtcttaccctg 211  Q
    ||||||||||||||||| |||||||||||| |   ||| ||||||||  ||||||||||||||||||||||||||| |||| ||||    
T  25632640 ggcaacccggtgcactaaagctcccgcatacgtaaggttcgggaaggaatcccaccatttggtgtattgtacgcagccttatcctg 25632555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 126 - 183
Target Start/End: Complemental strand, 41409993 - 41409936
Alignment:
Q  126 ggcaacccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccat 183  Q
    ||||||||||||||||  ||||||||||||||| ||||||||||||||||||||||||    
T  41409993 ggcaacccggtgcactgaagctcccgcatatgcagggtccgggaaggggtcccaccat 41409936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 126 - 207
Target Start/End: Complemental strand, 44643654 - 44643573
Alignment:
Q  126 ggcaacccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccatttggtgtattgtacgcagtcttac 207  Q
    |||| ||||||||||||  ||||||||||| || ||||| |||||||||||||||||||||||  ||||||||||| |||||    
T  44643654 ggcagcccggtgcactaaggctcccgcatacgcagggtctgggaaggggtcccaccatttggtacattgtacgcagccttac 44643573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 126 - 211
Target Start/End: Original strand, 24200627 - 24200714
Alignment:
Q  126 ggcaacccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccacca--tttggtgtattgtacgcagtcttaccctg 211  Q
    ||||||||||||||||| ||||| | ||||  | |||||||||||||| ||||||||  ||||||||||||||||||| |||||||||    
T  24200627 ggcaacccggtgcactaaagctctcacatactcagggtccgggaagggttcccaccatttttggtgtattgtacgcagccttaccctg 24200714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 126 - 182
Target Start/End: Complemental strand, 34080232 - 34080176
Alignment:
Q  126 ggcaacccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccacca 182  Q
    ||||||||||||||||| | ||||||||||||| |||||||||||||||||||||||    
T  34080232 ggcaacccggtgcactaaaactcccgcatatgcagggtccgggaaggggtcccacca 34080176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 126 - 201
Target Start/End: Original strand, 4516355 - 4516430
Alignment:
Q  126 ggcaacccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccatttggtgtattgtacgcag 201  Q
    |||| |||||| ||||| |||| || |||| || ||||||||||||||||||||||| ||||||||||||||||||    
T  4516355 ggcagcccggtacactaaagcttccacatacgcagggtccgggaaggggtcccaccaattggtgtattgtacgcag 4516430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 127 - 203
Target Start/End: Complemental strand, 23488613 - 23488535
Alignment:
Q  127 gcaacccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccacca--tttggtgtattgtacgcagtc 203  Q
    |||||||||||||||| ||||| |||||| || |||||||||||||||||||||||  ||| |||||||| ||||||||    
T  23488613 gcaacccggtgcactaaagctctcgcatacgcagggtccgggaaggggtcccaccattttttgtgtattgcacgcagtc 23488535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 126 - 232
Target Start/End: Original strand, 39914310 - 39914418
Alignment:
Q  126 ggcaacccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccatttggtgtattgtacgcagtcttaccctg---atgtacacaag 222  Q
    ||||||||| ||||||| |||||||||||| || ||||| || |||||||||||||||| |||||||||||| ||  |||||||||    | ||||||||    
T  39914310 ggcaacccgatgcactaaagctcccgcatacgcagggtcagg-aaggggtcccaccattcggtgtattgtacacatccttaccctgtttttttacacaag 39914408  T
Q  223 aggttgtttc 232  Q
    ||||||||||    
T  39914409 aggttgtttc 39914418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 126 - 176
Target Start/End: Original strand, 3633712 - 3633762
Alignment:
Q  126 ggcaacccggtgcactagagctcccgcatatgcggggtccgggaaggggtc 176  Q
    |||||| |||||||||| |||||||||||||||||||||||||||||||||    
T  3633712 ggcaactcggtgcactaaagctcccgcatatgcggggtccgggaaggggtc 3633762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 135 - 188
Target Start/End: Complemental strand, 4794924 - 4794871
Alignment:
Q  135 gtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccatttggt 188  Q
    |||||||||||||||||||||||| || ||||||||||||||||| ||||||||    
T  4794924 gtgcactagagctcccgcatatgcaggatccgggaaggggtcccatcatttggt 4794871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 126 - 183
Target Start/End: Original strand, 40579753 - 40579810
Alignment:
Q  126 ggcaacccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccat 183  Q
    ||||||||||||||||| ||||||||||||  | ||||||||||||||||||||||||    
T  40579753 ggcaacccggtgcactaaagctcccgcatactcagggtccgggaaggggtcccaccat 40579810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 144 - 233
Target Start/End: Original strand, 21377095 - 21377186
Alignment:
Q  144 agctcccgcatatgcggggtccgggaaggggtcccaccatttggtgtattgtacgcagtcttaccctg--atgtacacaagaggttgtttct 233  Q
    ||||||| |||| || |||| ||||||||||||||||||||||||| ||||||| ||| |||||||||   | ||||||||||| |||||||    
T  21377095 agctcccacatacgcagggttcgggaaggggtcccaccatttggtgcattgtacccagccttaccctgttttttacacaagaggatgtttct 21377186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 132 - 208
Target Start/End: Original strand, 26684630 - 26684706
Alignment:
Q  132 ccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccatttggtgtattgtacgcagtcttacc 208  Q
    |||||||| || |||||||||||| || |||| ||||||| ||||||||||||| || |||||||||||| ||||||    
T  26684630 ccggtgcattaaagctcccgcatacgcagggttcgggaagaggtcccaccatttagtatattgtacgcagccttacc 26684706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 134 - 210
Target Start/End: Complemental strand, 30826158 - 30826083
Alignment:
Q  134 ggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccatttggtgtattgtacgcagtcttaccct 210  Q
    ||||||||| ||||||||||||||  ||||| |||||||| ||| ||||||||||||||||||||||  ||||||||    
T  30826158 ggtgcactaaagctcccgcatatgtagggtctgggaagggttcc-accatttggtgtattgtacgcaaccttaccct 30826083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 134 - 200
Target Start/End: Original strand, 19977726 - 19977792
Alignment:
Q  134 ggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccatttggtgtattgtacgca 200  Q
    ||||||||| ||||||||||||  |  ||| ||||||||| ||||||||||||||||||||||||||    
T  19977726 ggtgcactaaagctcccgcatacacaaggttcgggaagggatcccaccatttggtgtattgtacgca 19977792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 160 - 232
Target Start/End: Complemental strand, 5450383 - 5450308
Alignment:
Q  160 gggtccgggaaggggtcccaccatttggtgtattgtacgcagtcttaccctg---atgtacacaagaggttgtttc 232  Q
    |||||| ||||||||||||||| ||||||||||||||||||| |||||| ||    | ||||||||||||||||||    
T  5450383 gggtccaggaaggggtcccaccctttggtgtattgtacgcagccttaccatgtttttttacacaagaggttgtttc 5450308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 132 - 235
Target Start/End: Complemental strand, 17471675 - 17471568
Alignment:
Q  132 ccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccacca-tttggtgtattgtacgcagtcttaccctg---atgtacacaagaggtt 227  Q
    ||||||||||| | |||||||||| || ||||| ||||||||||| || || |||||| ||||||||||||||||| ||||    | ||||||||||| |    
T  17471675 ccggtgcactaaaactcccgcataggcagggtcagggaaggggtctcatcattttggtatattgtacgcagtcttatcctgtttttttacacaagaggct 17471576  T
Q  228 gtttctga 235  Q
    ||||||||    
T  17471575 gtttctga 17471568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 129 - 182
Target Start/End: Complemental strand, 34766383 - 34766330
Alignment:
Q  129 aacccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccacca 182  Q
    |||||| ||||||| |||||||||||| || |||||||||||||||||||||||    
T  34766383 aacccgttgcactaaagctcccgcatacgcagggtccgggaaggggtcccacca 34766330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 126 - 211
Target Start/End: Original strand, 40416875 - 40416960
Alignment:
Q  126 ggcaacccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccatttggtgtattgtacgcagtcttaccctg 211  Q
    ||||||||||||||||| ||||| ||||||||| ||||||   || |||||||| || |||||||||||||| ||| ||| |||||    
T  40416875 ggcaacccggtgcactaaagctctcgcatatgcagggtccaaaaaagggtcccatcaattggtgtattgtacacagcctttccctg 40416960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 134 - 211
Target Start/End: Complemental strand, 14544189 - 14544110
Alignment:
Q  134 ggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccatttggtg--tattgtacgcagtcttaccctg 211  Q
    ||||||||| |||||||||||| || |||||| ||||||||||| |||||||  ||  ||||| ||||||||||||||||    
T  14544189 ggtgcactaaagctcccgcatacgcagggtcccggaaggggtccgaccattttttggttattgcacgcagtcttaccctg 14544110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 132 - 200
Target Start/End: Complemental strand, 25641626 - 25641558
Alignment:
Q  132 ccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccatttggtgtattgtacgca 200  Q
    ||||| ||||| ||||| |||||| || || | |||||||||||||||| |||||||||||||||||||    
T  25641626 ccggttcactaaagctctcgcatacgcaggattcgggaaggggtcccacaatttggtgtattgtacgca 25641558  T

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Target: chr2; HSP #46
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 134 - 211
Target Start/End: Original strand, 31158451 - 31158530
Alignment:
Q  134 ggtgcactagagctcccgcatatgcggggtccgggaaggggtcccacca--tttggtgtattgtacgcagtcttaccctg 211  Q
    |||| |||| |||||||||||| || ||||| |||||||||||||||||  |||||| ||||||| ||| ||||||||||    
T  31158451 ggtgtactaaagctcccgcatacgcagggtctgggaaggggtcccaccatttttggtttattgtatgcaatcttaccctg 31158530  T

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Target: chr2; HSP #47
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 138 - 201
Target Start/End: Original strand, 99281 - 99344
Alignment:
Q  138 cactagagctcccgcatatgcggggtccgggaaggggtcccaccatttggtgtattgtacgcag 201  Q
    ||||| ||||||||||||  | ||||| | |||||||| |||||||||||||||||||||||||    
T  99281 cactaaagctcccgcatacacagggtctgagaaggggttccaccatttggtgtattgtacgcag 99344  T

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Target: chr2; HSP #48
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 160 - 207
Target Start/End: Original strand, 23145736 - 23145783
Alignment:
Q  160 gggtccgggaaggggtcccaccatttggtgtattgtacgcagtcttac 207  Q
    ||||||||||| ||||||||||| |||||||||||||||||| |||||    
T  23145736 gggtccgggaaagggtcccaccaattggtgtattgtacgcagccttac 23145783  T

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Target: chr2; HSP #49
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 160 - 207
Target Start/End: Original strand, 23557526 - 23557573
Alignment:
Q  160 gggtccgggaaggggtcccaccatttggtgtattgtacgcagtcttac 207  Q
    ||||||||||| ||||||||||| |||||||||||||||||| |||||    
T  23557526 gggtccgggaaagggtcccaccaattggtgtattgtacgcagccttac 23557573  T

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Target: chr2; HSP #50
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 124 - 170
Target Start/End: Original strand, 124916 - 124962
Alignment:
Q  124 aaggcaacccggtgcactagagctcccgcatatgcggggtccgggaa 170  Q
    ||||||||||||||||||| |||||||||||| || |||||||||||    
T  124916 aaggcaacccggtgcactaaagctcccgcatacgcagggtccgggaa 124962  T

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Target: chr2; HSP #51
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 131 - 232
Target Start/End: Original strand, 17380247 - 17380348
Alignment:
Q  131 cccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccatttggtgtattgtacgcagtcttaccctg-atgtacacaagaggttgt 229  Q
    |||||||||| | |||||||||||  || |||||| ||||||||| ||| |||||||||||||| || ||  |||||||||  | |||||||||||||||    
T  17380247 cccggtgcacaa-agctcccgcatccgcagggtccaggaaggggttccatcatttggtgtattgcacacaaccttaccctgtttatacacaagaggttgt 17380345  T
Q  230 ttc 232  Q
    |||    
T  17380346 ttc 17380348  T

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Target: chr2; HSP #52
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 126 - 208
Target Start/End: Complemental strand, 27573751 - 27573669
Alignment:
Q  126 ggcaacccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccatttggtgtattgtacgcagtcttacc 208  Q
    ||||||||| ||||||| ||||||| ||||  | ||||  |||||  ||| ||||||||||||||||||||||||| ||||||    
T  27573751 ggcaacccgatgcactaaagctcccacatacacagggtttgggaaatggttccaccatttggtgtattgtacgcagccttacc 27573669  T

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Target: chr2; HSP #53
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 130 - 192
Target Start/End: Complemental strand, 31523358 - 31523296
Alignment:
Q  130 acccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccatttggtgtat 192  Q
    |||| |||||||| ||||||||||||||| ||||  ||||| |||| ||||||||||||||||    
T  31523358 acccagtgcactaaagctcccgcatatgcagggtttgggaaagggttccaccatttggtgtat 31523296  T

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Target: chr2; HSP #54
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 126 - 192
Target Start/End: Complemental strand, 31525837 - 31525771
Alignment:
Q  126 ggcaacccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccatttggtgtat 192  Q
    ||||| ||||| ||||| ||||||||||||||| ||||| || || |||||||| ||||||||||||    
T  31525837 ggcaatccggtacactaaagctcccgcatatgcagggtctggcaaagggtcccatcatttggtgtat 31525771  T

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Target: chr2; HSP #55
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 134 - 211
Target Start/End: Complemental strand, 19615116 - 19615038
Alignment:
Q  134 ggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccatt--tggtgtattgtacgcagtcttaccctg 211  Q
    ||||||||| |||||| ||||| || |||| ||||||||||||| || |||  |||| ||||||||||||||||||||||    
T  19615116 ggtgcactaaagctcctgcatacgcagggttcgggaaggggtcc-actattattggtatattgtacgcagtcttaccctg 19615038  T

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Target: chr2; HSP #56
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 126 - 170
Target Start/End: Complemental strand, 22371243 - 22371199
Alignment:
Q  126 ggcaacccggtgcactagagctcccgcatatgcggggtccgggaa 170  Q
    ||||||||||||||||| |||||||||||| || |||||||||||    
T  22371243 ggcaacccggtgcactaaagctcccgcatacgcagggtccgggaa 22371199  T

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Target: chr2; HSP #57
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 134 - 210
Target Start/End: Original strand, 39499242 - 39499318
Alignment:
Q  134 ggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccatttggtgtattgtacgcagtcttaccct 210  Q
    ||||||||| |||||||||||| || || | ||  ||||| |||||||||||| ||||||||||||||  |||||||    
T  39499242 ggtgcactaaagctcccgcatacgcaggattcgaaaagggatcccaccatttgatgtattgtacgcagctttaccct 39499318  T

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Target: chr2; HSP #58
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 160 - 211
Target Start/End: Original strand, 44449421 - 44449473
Alignment:
Q  160 gggtccgggaaggggtcccacca-tttggtgtattgtacgcagtcttaccctg 211  Q
    ||||||||||||||||||||| | ||||||||||||||||||| |||| ||||    
T  44449421 gggtccgggaaggggtcccactattttggtgtattgtacgcagccttatcctg 44449473  T

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Target: chr2; HSP #59
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 126 - 184
Target Start/End: Complemental strand, 1289154 - 1289095
Alignment:
Q  126 ggcaacccggtgcactaga-gctcccgcatatgcggggtccgggaaggggtcccaccatt 184  Q
    ||||| ||||||||||| | ||||||||||||||  | ||||||||||||||||||||||    
T  1289154 ggcaatccggtgcactaaaagctcccgcatatgcatgatccgggaaggggtcccaccatt 1289095  T

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Target: chr2; HSP #60
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 126 - 177
Target Start/End: Complemental strand, 8576026 - 8575975
Alignment:
Q  126 ggcaacccggtgcactagagctcccgcatatgcggggtccgggaaggggtcc 177  Q
    ||||||| ||||||||| ||||||| |||| || ||||||||||||||||||    
T  8576026 ggcaacctggtgcactaaagctcccacatacgcagggtccgggaaggggtcc 8575975  T

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Target: chr2; HSP #61
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 138 - 193
Target Start/End: Original strand, 24059012 - 24059067
Alignment:
Q  138 cactagagctcccgcatatgcggggtccgggaaggggtcccaccatttggtgtatt 193  Q
    ||||| ||||||| |||| || |||||||| ||||||||||||||| |||||||||    
T  24059012 cactaaagctcccacatacgcagggtccggaaaggggtcccaccatatggtgtatt 24059067  T

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Target: chr2; HSP #62
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 124 - 211
Target Start/End: Complemental strand, 7214669 - 7214580
Alignment:
Q  124 aaggcaacccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccatttg--gtgtattgtacgcagtcttaccctg 211  Q
    ||||||||| ||||||||| | ||| |||||| || | ||||| |||||| || ||||||||   ||||||||||||||| |||||||||    
T  7214669 aaggcaacctggtgcactaaaactctcgcatacgcagtgtccgagaagggatctcaccattttttgtgtattgtacgcagccttaccctg 7214580  T

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Target: chr2; HSP #63
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 124 - 210
Target Start/End: Original strand, 31821345 - 31821431
Alignment:
Q  124 aaggcaacccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccatttggtgtattgtacgcagtcttaccct 210  Q
    |||||| || |||||| || ||||||||||||  | || | ||| ||||||||||| ||||||||||||||||| ||  ||||||||    
T  31821345 aaggcagccaggtgcattaaagctcccgcatacacaggtttcggaaaggggtcccatcatttggtgtattgtacacaaccttaccct 31821431  T

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Target: chr2; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 191
Target Start/End: Complemental strand, 4252684 - 4252656
Alignment:
Q  163 tccgggaaggggtcccaccatttggtgta 191  Q
    |||||||||||||||||||||||||||||    
T  4252684 tccgggaaggggtcccaccatttggtgta 4252656  T

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Target: chr2; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 211
Target Start/End: Original strand, 12315697 - 12315741
Alignment:
Q  167 ggaaggggtcccaccatttggtgtattgtacgcagtcttaccctg 211  Q
    |||||| ||| ||| |||||||||||||||| |||||||||||||    
T  12315697 ggaaggagtctcactatttggtgtattgtacacagtcttaccctg 12315741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 211
Target Start/End: Complemental strand, 33795398 - 33795331
Alignment:
Q  144 agctcccgcatatgcggggtccgggaaggggtcccaccatttggtgta-ttgtacgcagtcttaccctg 211  Q
    ||||||||||||  | ||||| ||||||||||||||||| | |||||| |||||||||| |||||||||    
T  33795398 agctcccgcatacacagggtctgggaaggggtcccacca-taggtgtatttgtacgcagccttaccctg 33795331  T

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Target: scaffold0187 (Bit Score: 75; Significance: 1e-34; HSPs: 2)
Name: scaffold0187
Description:

Target: scaffold0187; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 126 - 232
Target Start/End: Original strand, 10054 - 10160
Alignment:
Q  126 ggcaacccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccatttggtgtattgtacgcagtcttaccctgatgtacacaagagg 225  Q
    |||||||||||||||| ||||||| |||||||| ||||||||||||||||||||| |||||||||||||||||||||||||| ||| | |||||||||||    
T  10054 ggcaacccggtgcactggagctcctgcatatgcagggtccgggaaggggtcccactatttggtgtattgtacgcagtcttactctgttttacacaagagg 10153  T
Q  226 ttgtttc 232  Q
     ||||||    
T  10154 ctgtttc 10160  T

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Target: scaffold0187; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 126 - 232
Target Start/End: Original strand, 20382 - 20488
Alignment:
Q  126 ggcaacccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccatttggtgtattgtacgcagtcttaccctgatgtacacaagagg 225  Q
    |||||||||||||||| ||||||| |||||||| ||||||||||||||||||||| |||||||||||||||||||||||||| ||| | |||||||||||    
T  20382 ggcaacccggtgcactggagctcctgcatatgcagggtccgggaaggggtcccactatttggtgtattgtacgcagtcttactctgttttacacaagagg 20481  T
Q  226 ttgtttc 232  Q
     ||||||    
T  20482 ctgtttc 20488  T

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Target: scaffold0180 (Bit Score: 72; Significance: 7e-33; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 126 - 209
Target Start/End: Original strand, 24137 - 24220
Alignment:
Q  126 ggcaacccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccatttggtgtattgtacgcagtcttaccc 209  Q
    ||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||    
T  24137 ggcaatccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccc 24220  T

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Target: scaffold1176 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold1176
Description:

Target: scaffold1176; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 124 - 231
Target Start/End: Original strand, 1589 - 1696
Alignment:
Q  124 aaggcaacccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccatttggtgtattgtacgcagtcttaccctgatgtacacaaga 223  Q
    ||||||||| ||||||||| |||||||||||| || |||||||||||||||||||| |||||||||||||||| |||| |||| |||| | |||||||||    
T  1589 aaggcaacctggtgcactaaagctcccgcatacgccgggtccgggaaggggtcccatcatttggtgtattgtatgcagccttatcctgttttacacaaga 1688  T
Q  224 ggttgttt 231  Q
    ||||||||    
T  1689 ggttgttt 1696  T

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Target: scaffold0223 (Bit Score: 67; Significance: 7e-30; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 126 - 232
Target Start/End: Complemental strand, 11260 - 11154
Alignment:
Q  126 ggcaacccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccatttggtgtattgtacgcagtcttaccctgatgtacacaagagg 225  Q
    ||||||| ||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||| |||| |||||  || | |||||||||||    
T  11260 ggcaacctggtgcactagagctcccgcatatgcagggtccgggaaggtgtcccaccatttggtgtattgtaagcagccttactttgttttacacaagagg 11161  T
Q  226 ttgtttc 232  Q
     ||||||    
T  11160 ctgtttc 11154  T

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Target: scaffold0057 (Bit Score: 66; Significance: 3e-29; HSPs: 4)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 126 - 232
Target Start/End: Complemental strand, 46962 - 46854
Alignment:
Q  126 ggcaacccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccatttggtgtattgtacgcagtcttaccc--tgatgtacacaaga 223  Q
    ||||||||||||||||| |||||||||||| || |||||||||||||||||||||||||||||||||||||||||  |||||||  |  | |||||||||    
T  46962 ggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccatttggtgtattgtacgcaaccttaccctattttttacacaaga 46863  T
Q  224 ggttgtttc 232  Q
    |||||||||    
T  46862 ggttgtttc 46854  T

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Target: scaffold0057; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 126 - 232
Target Start/End: Complemental strand, 43789 - 43682
Alignment:
Q  126 ggcaacccggtgcactagagctcccgcatatgcggggtccgggaa-ggggtcccaccatttggtgtattgtacgcagtcttaccctgatgtacacaagag 224  Q
    |||||| | |||||||||||||||||||||||| ||||||| ||| ||||||||||||||||||||||||||||||| |||||| || | |||||||||     
T  43789 ggcaactcagtgcactagagctcccgcatatgcagggtccgagaaaggggtcccaccatttggtgtattgtacgcagccttaccttgttttacacaagac 43690  T
Q  225 gttgtttc 232  Q
    | ||||||    
T  43689 gctgtttc 43682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057; HSP #3
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 126 - 211
Target Start/End: Original strand, 24776 - 24861
Alignment:
Q  126 ggcaacccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccatttggtgtattgtacgcagtcttaccctg 211  Q
    ||||||| | ||||||| |||||||||||| || |||| |||||||||||||||||||||||||| |||||||||| |||||||||    
T  24776 ggcaaccggctgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccatttggtgtgttgtacgcagccttaccctg 24861  T

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Target: scaffold0057; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 144 - 210
Target Start/End: Original strand, 46729 - 46796
Alignment:
Q  144 agctcccgcatatgcggggtccgggaaggggtcccacca-tttggtgtattgtacgcagtcttaccct 210  Q
    |||||||||||| || ||||| ||||||||||||||||| |||||| ||||||| |||  ||||||||    
T  46729 agctcccgcatacgcagggtctgggaaggggtcccaccattttggtatattgtatgcatccttaccct 46796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0311 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0311
Description:

Target: scaffold0311; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 127 - 231
Target Start/End: Complemental strand, 10940 - 10834
Alignment:
Q  127 gcaacccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccatttggtgtattgtacgcagtcttaccctg--atgtacacaagag 224  Q
    ||||||| |||||||| |||||||||||| || ||||||||||||||||||||||||||||||||||| |||||| | |||||||   | ||||||||||    
T  10940 gcaacccagtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccatttggtgtattggacgcagccctaccctgttttttacacaagag 10841  T
Q  225 gttgttt 231  Q
    |||||||    
T  10840 gttgttt 10834  T

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Target: scaffold0258 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0258
Description:

Target: scaffold0258; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 126 - 208
Target Start/End: Original strand, 13028 - 13110
Alignment:
Q  126 ggcaacccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccatttggtgtattgtacgcagtcttacc 208  Q
    ||||||||||||||||| ||| |||||||| || ||||| ||||||||||||||||||| |||||||||||||||| ||||||    
T  13028 ggcaacccggtgcactaaagcccccgcatacgcagggtctgggaaggggtcccaccattcggtgtattgtacgcagccttacc 13110  T

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Target: scaffold0049 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 126 - 211
Target Start/End: Complemental strand, 59110 - 59023
Alignment:
Q  126 ggcaacccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccacca--tttggtgtattgtacgcagtcttaccctg 211  Q
    ||||||||| ||||||| |||||||||||| || | ||| |||||||||||||||||  |||||||||||||||||||||||||||||    
T  59110 ggcaacccgatgcactaaagctcccgcatacgcagagtctgggaaggggtcccaccatttttggtgtattgtacgcagtcttaccctg 59023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 126 - 208
Target Start/End: Original strand, 72871 - 72953
Alignment:
Q  126 ggcaacccggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccatttggtgtattgtacgcagtcttacc 208  Q
    ||||||| ||||||||| |||||||||||| || || ||||||||||||| | |||||||||||||||||| |||| ||||||    
T  72871 ggcaacctggtgcactaaagctcccgcatacgcaggttccgggaaggggtactaccatttggtgtattgtaggcagccttacc 72953  T

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Target: scaffold0954 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0954
Description:

Target: scaffold0954; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 133 - 208
Target Start/End: Complemental strand, 3668 - 3593
Alignment:
Q  133 cggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccatttggtgtattgtacgcagtcttacc 208  Q
    |||||||||| |||| ||||||| || |||| ||||||||||||||| |||| |||||||| ||||||| ||||||    
T  3668 cggtgcactaaagctgccgcatacgcagggttcgggaaggggtcccatcattcggtgtattatacgcagccttacc 3593  T

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Target: scaffold0036 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 167 - 211
Target Start/End: Original strand, 35062 - 35106
Alignment:
Q  167 ggaaggggtcccaccatttggtgtattgtacgcagtcttaccctg 211  Q
    |||| |||||||||||||||||||||||||||||| |||||||||    
T  35062 ggaaagggtcccaccatttggtgtattgtacgcagccttaccctg 35106  T

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Target: scaffold0194 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0194
Description:

Target: scaffold0194; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 134 - 209
Target Start/End: Complemental strand, 24771 - 24696
Alignment:
Q  134 ggtgcactagagctcccgcatatgcggggtccgggaaggggtcccaccatttggtgtattgtacgcagtcttaccc 209  Q
    ||||||||  |||||||| ||| || ||||| || ||||||  |||| |||||||||||| |||||||||||||||    
T  24771 ggtgcactgaagctcccgtatacgcagggtctggaaagggggtccactatttggtgtattatacgcagtcttaccc 24696  T

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Target: scaffold0167 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0167
Description:

Target: scaffold0167; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 161 - 231
Target Start/End: Complemental strand, 23695 - 23623
Alignment:
Q  161 ggtccgggaaggggtcccaccatttggtgtattgtacgcagtcttaccctg--atgtacacaagaggttgttt 231  Q
    |||| ||||||||||||||||||||| |  ||||||||||| || ||||||   | |||||||||||||||||    
T  23695 ggtctgggaaggggtcccaccatttgctacattgtacgcagcctcaccctgttttttacacaagaggttgttt 23623  T

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Target: scaffold0867 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0867
Description:

Target: scaffold0867; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 172 - 200
Target Start/End: Original strand, 3719 - 3747
Alignment:
Q  172 gggtcccaccatttggtgtattgtacgca 200  Q
    |||||||||||||||||||||||||||||    
T  3719 gggtcccaccatttggtgtattgtacgca 3747  T

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Target: scaffold0254 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0254
Description:

Target: scaffold0254; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 160 - 232
Target Start/End: Complemental strand, 4257 - 4180
Alignment:
Q  160 gggtccgggaaggggtcccacca---tttggtgtattgtacgcagtcttaccctg--atgtacacaagaggttgtttc 232  Q
    |||||||||||||||||||||||    |||||||||||||||||  |||| ||||   | ||||||||||||||||||    
T  4257 gggtccgggaaggggtcccaccaattattggtgtattgtacgcaaccttatcctgtattttacacaagaggttgtttc 4180  T

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