View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF19278_high_12 (Length: 238)
Name: NF19278_high_12
Description: NF19278
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19278_high_12 |
 | |
|
| [»] scaffold0007 (1 HSPs) |
| | |
|
| [»] scaffold0122 (1 HSPs) |
| | |
|
| [»] scaffold0001 (1 HSPs) |
| | |
|
Alignment Details
Target: chr7 (Bit Score: 50; Significance: 9e-20; HSPs: 30)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 139 - 223
Target Start/End: Original strand, 10467118 - 10467203
Alignment:
| Q |
139 |
attcgaacctcaaatcttgcatatattatgcattatcc-taccaactgagttaaactcataagataactaagttgtagttaaatat |
223 |
Q |
| |
|
||||||||| |||| |||||| |||||||||||||||| |||||||||| ||||||||| |||||||||||||||||||||||| |
|
|
| T |
10467118 |
attcgaaccccaaaccttgcaaatattatgcattatccctaccaactgatctaaactcatgggataactaagttgtagttaaatat |
10467203 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 46 - 93
Target Start/End: Original strand, 10466878 - 10466925
Alignment:
| Q |
46 |
aatagtgagacaaaagtttacatgagcaaggtgaggtgaaaaatcaac |
93 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
10466878 |
aatagtgagacaaaagcttacatgagcaaggtgaggtgaaaaatcaac |
10466925 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 14 - 49
Target Start/End: Original strand, 20544096 - 20544131
Alignment:
| Q |
14 |
tttttgttcctacattttgcatgactttgaagaata |
49 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| |
|
|
| T |
20544096 |
tttttgttcctacattttgcatgactttgaagaata |
20544131 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 139 - 196
Target Start/End: Complemental strand, 5833101 - 5833043
Alignment:
| Q |
139 |
attcgaacctcaaatcttgcatatattatgcattat-cctaccaactgagttaaactca |
196 |
Q |
| |
|
||||||||| ||||| |||||||||||||||||||| ||||||||||||| ||| |||| |
|
|
| T |
5833101 |
attcgaaccacaaatattgcatatattatgcattatccctaccaactgagctaagctca |
5833043 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 150 - 191
Target Start/End: Original strand, 39458557 - 39458599
Alignment:
| Q |
150 |
aaatcttgcatatattatgcattat-cctaccaactgagttaa |
191 |
Q |
| |
|
||||||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
39458557 |
aaatcttgcatatattatgcattatccctaccaactgagttaa |
39458599 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 138 - 191
Target Start/End: Original strand, 44941414 - 44941468
Alignment:
| Q |
138 |
gattcgaacctcaaatcttgcatatattatgcattat-cctaccaactgagttaa |
191 |
Q |
| |
|
|||| |||||| ||| ||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
44941414 |
gatttgaaccttaaaccttgcatatattatgcattatccctaccaactgagttaa |
44941468 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 132 - 188
Target Start/End: Complemental strand, 36593693 - 36593636
Alignment:
| Q |
132 |
gtctgagattcgaacctcaaatcttgcatatattatgcattat-cctaccaactgagt |
188 |
Q |
| |
|
|||||||||||||||| |||| |||||||||||||| |||||| || ||||||||||| |
|
|
| T |
36593693 |
gtctgagattcgaaccacaaaccttgcatatattattcattatcccaaccaactgagt |
36593636 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 132 - 191
Target Start/End: Original strand, 32896459 - 32896519
Alignment:
| Q |
132 |
gtctgagattcgaacctcaaatcttgcatatattatgcattatcc-taccaactgagttaa |
191 |
Q |
| |
|
||||||| |||||||| ||||||||| |||||||||||||| ||| | ||||||||||||| |
|
|
| T |
32896459 |
gtctgaggttcgaaccccaaatcttgtatatattatgcattgtccttcccaactgagttaa |
32896519 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 154 - 196
Target Start/End: Complemental strand, 19599189 - 19599146
Alignment:
| Q |
154 |
cttgcatatattatgcattatcc-taccaactgagttaaactca |
196 |
Q |
| |
|
||||||||||||||||||| ||| |||||||||||||||||||| |
|
|
| T |
19599189 |
cttgcatatattatgcattgtccataccaactgagttaaactca |
19599146 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 154 - 196
Target Start/End: Complemental strand, 4047829 - 4047787
Alignment:
| Q |
154 |
cttgcatatattatgcattatcctaccaactgagttaaactca |
196 |
Q |
| |
|
||||||||||||||||||||||||| |||||||| ||| |||| |
|
|
| T |
4047829 |
cttgcatatattatgcattatcctatcaactgagctaagctca |
4047787 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 154 - 196
Target Start/End: Original strand, 20085776 - 20085818
Alignment:
| Q |
154 |
cttgcatatattatgcattatcctaccaactgagttaaactca |
196 |
Q |
| |
|
||||||||||||||||||| || |||| ||||||||||||||| |
|
|
| T |
20085776 |
cttgcatatattatgcattgtcttaccgactgagttaaactca |
20085818 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 151 - 196
Target Start/End: Complemental strand, 22267628 - 22267582
Alignment:
| Q |
151 |
aatcttgcatatattatgcattatc-ctaccaactgagttaaactca |
196 |
Q |
| |
|
|||||| ||||||||||||||| || ||||||||||||||||||||| |
|
|
| T |
22267628 |
aatcttacatatattatgcattgtctctaccaactgagttaaactca |
22267582 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 158 - 196
Target Start/End: Complemental strand, 36755054 - 36755016
Alignment:
| Q |
158 |
catatattatgcattatcctaccaactgagttaaactca |
196 |
Q |
| |
|
||||||||||||||| |||||||||||||||||| |||| |
|
|
| T |
36755054 |
catatattatgcattgtcctaccaactgagttaagctca |
36755016 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 158 - 196
Target Start/End: Complemental strand, 36760851 - 36760813
Alignment:
| Q |
158 |
catatattatgcattatcctaccaactgagttaaactca |
196 |
Q |
| |
|
||||||||||||||| |||||||||||||||||| |||| |
|
|
| T |
36760851 |
catatattatgcattgtcctaccaactgagttaagctca |
36760813 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 152 - 196
Target Start/End: Original strand, 1285084 - 1285129
Alignment:
| Q |
152 |
atcttgcatatattatgcatt-atcctaccaactgagttaaactca |
196 |
Q |
| |
|
||||||||||||||||||||| ||||| ||||||||||||||||| |
|
|
| T |
1285084 |
atcttgcatatattatgcattgttcctatcaactgagttaaactca |
1285129 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 140 - 196
Target Start/End: Complemental strand, 1399220 - 1399163
Alignment:
| Q |
140 |
ttcgaacctcaaatcttgcatatattatgcattatcc-taccaactgagttaaactca |
196 |
Q |
| |
|
|||||| |||| | ||||||||||| ||||||| ||| |||||||||||||||||||| |
|
|
| T |
1399220 |
ttcgaatctcagaccttgcatatatcatgcattgtccataccaactgagttaaactca |
1399163 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 163 - 196
Target Start/End: Complemental strand, 7946720 - 7946687
Alignment:
| Q |
163 |
attatgcattatcctaccaactgagttaaactca |
196 |
Q |
| |
|
|||||||||||| ||||||||||||||||||||| |
|
|
| T |
7946720 |
attatgcattattctaccaactgagttaaactca |
7946687 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 152 - 196
Target Start/End: Original strand, 9819564 - 9819609
Alignment:
| Q |
152 |
atcttgcatatattatgcatt-atcctaccaactgagttaaactca |
196 |
Q |
| |
|
||||||||||||||||||||| |||||||||||||| |||||||| |
|
|
| T |
9819564 |
atcttgcatatattatgcattgttcctaccaactgagataaactca |
9819609 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 140 - 196
Target Start/End: Original strand, 10236908 - 10236965
Alignment:
| Q |
140 |
ttcgaacctcaaatcttgcatatattatgcattatcct-accaactgagttaaactca |
196 |
Q |
| |
|
|||||||||| || |||||||| |||||||||| | || ||||||||||||||||||| |
|
|
| T |
10236908 |
ttcgaacctcgaaccttgcatacattatgcattgttcttaccaactgagttaaactca |
10236965 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 152 - 196
Target Start/End: Original strand, 10721489 - 10721534
Alignment:
| Q |
152 |
atcttgcatatattatgcatt-atcctaccaactgagttaaactca |
196 |
Q |
| |
|
||||||||||||||||||||| |||||||||||||| |||||||| |
|
|
| T |
10721489 |
atcttgcatatattatgcattgttcctaccaactgagataaactca |
10721534 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 140 - 196
Target Start/End: Complemental strand, 21105661 - 21105604
Alignment:
| Q |
140 |
ttcgaacctcaaatcttgcatatattatgcattatcc-taccaactgagttaaactca |
196 |
Q |
| |
|
|||||||||| || ||||||||||||||||||| ||| ||||||||||| ||| |||| |
|
|
| T |
21105661 |
ttcgaacctcgaaccttgcatatattatgcattttccataccaactgagctaagctca |
21105604 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 144 - 196
Target Start/End: Original strand, 21164765 - 21164818
Alignment:
| Q |
144 |
aacctcaaatcttgcatatattatgcattatcc-taccaactgagttaaactca |
196 |
Q |
| |
|
||||||||| ||| |||||||||||||||||| ||||||||||||||| |||| |
|
|
| T |
21164765 |
aacctcaaaccttatatatattatgcattatccataccaactgagttaagctca |
21164818 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 22 - 51
Target Start/End: Complemental strand, 22948775 - 22948746
Alignment:
| Q |
22 |
cctacattttgcatgactttgaagaatagt |
51 |
Q |
| |
|
|||||||||||||||||||||||||||||| |
|
|
| T |
22948775 |
cctacattttgcatgactttgaagaatagt |
22948746 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 156 - 196
Target Start/End: Original strand, 29461840 - 29461881
Alignment:
| Q |
156 |
tgcatatattatgcattatcc-taccaactgagttaaactca |
196 |
Q |
| |
|
||||||||||||||||| ||| |||||||||||||||||||| |
|
|
| T |
29461840 |
tgcatatattatgcattgtccctaccaactgagttaaactca |
29461881 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 144 - 196
Target Start/End: Original strand, 44558781 - 44558834
Alignment:
| Q |
144 |
aacctcaaatcttgcatatattatgcattatcc-taccaactgagttaaactca |
196 |
Q |
| |
|
||||||| | ||||||||||||||||||| ||| ||||||||||| |||||||| |
|
|
| T |
44558781 |
aacctcagaccttgcatatattatgcattgtccataccaactgagctaaactca |
44558834 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 153 - 196
Target Start/End: Complemental strand, 3948099 - 3948055
Alignment:
| Q |
153 |
tcttgcatatattatgcattatc-ctaccaactgagttaaactca |
196 |
Q |
| |
|
|||||||||||||||||||| || ||| ||||||||||||||||| |
|
|
| T |
3948099 |
tcttgcatatattatgcattgtctctatcaactgagttaaactca |
3948055 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 136 - 172
Target Start/End: Original strand, 6768706 - 6768742
Alignment:
| Q |
136 |
gagattcgaacctcaaatcttgcatatattatgcatt |
172 |
Q |
| |
|
||||||||||||||| | ||||||||||||||||||| |
|
|
| T |
6768706 |
gagattcgaacctcagaccttgcatatattatgcatt |
6768742 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 51
Target Start/End: Original strand, 10466620 - 10466664
Alignment:
| Q |
7 |
gaatatatttttgttcctacattttgcatgactttgaagaatagt |
51 |
Q |
| |
|
||||||||| ||| ||||||||||||| |||||||||| |||||| |
|
|
| T |
10466620 |
gaatatattcttggtcctacattttgcgtgactttgaaaaatagt |
10466664 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 149 - 196
Target Start/End: Original strand, 21751638 - 21751686
Alignment:
| Q |
149 |
caaatcttgcatatattatgca-ttatcctaccaactgagttaaactca |
196 |
Q |
| |
|
|||||||||||||||||||||| || ||||||||||| |||||| |||| |
|
|
| T |
21751638 |
caaatcttgcatatattatgcatttttcctaccaactaagttaagctca |
21751686 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 140 - 191
Target Start/End: Complemental strand, 48837925 - 48837873
Alignment:
| Q |
140 |
ttcgaacctcaaatcttgcatatattatgcattatcc-taccaactgagttaa |
191 |
Q |
| |
|
|||||||| |||| |||||||||||||||||||||| |||||| |||||||| |
|
|
| T |
48837925 |
ttcgaaccccaaactttgcatatattatgcattatccataccaattgagttaa |
48837873 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 14)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 136 - 196
Target Start/End: Original strand, 30639425 - 30639486
Alignment:
| Q |
136 |
gagattcgaacctcaaatcttgcatatattatgcatta-tcctaccaactgagttaaactca |
196 |
Q |
| |
|
||||||||||||||| | |||||||||||||||||||| |||||||||||||| |||||||| |
|
|
| T |
30639425 |
gagattcgaacctcagaccttgcatatattatgcattattcctaccaactgagctaaactca |
30639486 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 154 - 196
Target Start/End: Complemental strand, 5340123 - 5340081
Alignment:
| Q |
154 |
cttgcatatattatgcattatcctaccaactgagttaaactca |
196 |
Q |
| |
|
|||||||||||||| |||||||||||||| ||||||||||||| |
|
|
| T |
5340123 |
cttgcatatattatacattatcctaccaattgagttaaactca |
5340081 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 158 - 196
Target Start/End: Complemental strand, 10018439 - 10018401
Alignment:
| Q |
158 |
catatattatgcattatcctaccaactgagttaaactca |
196 |
Q |
| |
|
|||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
10018439 |
catatattatgcattatcctaccaactgagctaaactca |
10018401 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 143 - 196
Target Start/End: Original strand, 1989049 - 1989102
Alignment:
| Q |
143 |
gaacctcaaatcttgcatatattatgcattatcctaccaactgagttaaactca |
196 |
Q |
| |
|
|||||||||| ||| ||||||||||||||| || ||||||||||||||| |||| |
|
|
| T |
1989049 |
gaacctcaaaccttacatatattatgcattgtcataccaactgagttaagctca |
1989102 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 138 - 192
Target Start/End: Original strand, 3373382 - 3373437
Alignment:
| Q |
138 |
gattcgaacctcaaatcttgcatatattatgcattatcc-taccaactgagttaaa |
192 |
Q |
| |
|
|||||||| | |||||||||||||||||||||||| ||| || ||||||||||||| |
|
|
| T |
3373382 |
gattcgaatcccaaatcttgcatatattatgcattgtccatatcaactgagttaaa |
3373437 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 148 - 187
Target Start/End: Original strand, 12735153 - 12735192
Alignment:
| Q |
148 |
tcaaatcttgcatatattatgcattatcctaccaactgag |
187 |
Q |
| |
|
||||| ||||||||||||||||||| |||||||||||||| |
|
|
| T |
12735153 |
tcaaaccttgcatatattatgcattgtcctaccaactgag |
12735192 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 177
Target Start/End: Original strand, 1874963 - 1874997
Alignment:
| Q |
143 |
gaacctcaaatcttgcatatattatgcattatcct |
177 |
Q |
| |
|
||||||||||||||||||||||||||||| ||||| |
|
|
| T |
1874963 |
gaacctcaaatcttgcatatattatgcatcatcct |
1874997 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 196
Target Start/End: Original strand, 9311936 - 9311990
Alignment:
| Q |
143 |
gaacctcaaatcttgcatatattatgcatta-tcctaccaactgagttaaactca |
196 |
Q |
| |
|
|||||||||||||| ||||||||||| |||| || ||||||||||||||| |||| |
|
|
| T |
9311936 |
gaacctcaaatcttacatatattatgtattattcataccaactgagttaagctca |
9311990 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 140 - 196
Target Start/End: Original strand, 1918461 - 1918518
Alignment:
| Q |
140 |
ttcgaacctcaaatcttgcatatattatgcattatc-ctaccaactgagttaaactca |
196 |
Q |
| |
|
|||||||||| | ||||||||||||||||||| || |||||||||||||||||||| |
|
|
| T |
1918461 |
ttcgaacctcggaccttgcatatattatgcattgtctataccaactgagttaaactca |
1918518 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 140 - 196
Target Start/End: Original strand, 15291693 - 15291750
Alignment:
| Q |
140 |
ttcgaacctcaaatcttgcatatattatgcattatcc-taccaactgagttaaactca |
196 |
Q |
| |
|
||||||||||||| |||||||||||||| |||| ||| |||||||| |||||| |||| |
|
|
| T |
15291693 |
ttcgaacctcaaaccttgcatatattattcattgtccttaccaactaagttaagctca |
15291750 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 143 - 196
Target Start/End: Complemental strand, 28987931 - 28987878
Alignment:
| Q |
143 |
gaacctcaaatcttgcatatattatgcattatcctaccaactgagttaaactca |
196 |
Q |
| |
|
||||||| || ||||||| ||||||| ||| |||||||||||||||||| |||| |
|
|
| T |
28987931 |
gaacctctaaccttgcatttattatgtattgtcctaccaactgagttaagctca |
28987878 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 140 - 196
Target Start/End: Complemental strand, 35110112 - 35110055
Alignment:
| Q |
140 |
ttcgaacctcaaatcttgcatatattatgcattatcct-accaactgagttaaactca |
196 |
Q |
| |
|
||||||||||||| ||| |||||||||||||||||| | ||||| |||| |||||||| |
|
|
| T |
35110112 |
ttcgaacctcaaaccttacatatattatgcattatcttgaccaattgagctaaactca |
35110055 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 149 - 196
Target Start/End: Original strand, 331898 - 331946
Alignment:
| Q |
149 |
caaatcttgcatatattatgcattatc-ctaccaactgagttaaactca |
196 |
Q |
| |
|
|||| ||||||||||||||||||| || |||||||||||||||| |||| |
|
|
| T |
331898 |
caaaccttgcatatattatgcattgtctctaccaactgagttaagctca |
331946 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 132 - 191
Target Start/End: Original strand, 10497147 - 10497207
Alignment:
| Q |
132 |
gtctgagattcgaacctcaaatcttgcatatattatgcattatcc-taccaactgagttaa |
191 |
Q |
| |
|
||||| |||||||||| |||| ||| ||||||||||||||| ||| ||| ||||||||||| |
|
|
| T |
10497147 |
gtctgggattcgaaccgcaaaccttacatatattatgcattgtccttacaaactgagttaa |
10497207 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 23)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 138 - 196
Target Start/End: Complemental strand, 3156594 - 3156535
Alignment:
| Q |
138 |
gattcgaacctcaaatcttgcatatattatgcattatcc-taccaactgagttaaactca |
196 |
Q |
| |
|
|||||||||| |||||||| ||||| ||||||||||||| |||||||||||||||||||| |
|
|
| T |
3156594 |
gattcgaaccccaaatcttacatattttatgcattatccataccaactgagttaaactca |
3156535 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 138 - 196
Target Start/End: Complemental strand, 11017236 - 11017177
Alignment:
| Q |
138 |
gattcgaacctcaaatcttgcatatattatgcattat-cctaccaactgagttaaactca |
196 |
Q |
| |
|
||||||||||||| | ||||||||||||||||||||| ||||||||||||| |||||||| |
|
|
| T |
11017236 |
gattcgaacctcagaccttgcatatattatgcattatccctaccaactgagctaaactca |
11017177 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 138 - 191
Target Start/End: Complemental strand, 11647257 - 11647203
Alignment:
| Q |
138 |
gattcgaacctcaaatcttgcatatattatgcattatcc-taccaactgagttaa |
191 |
Q |
| |
|
|||||||||| |||| ||||||||||||||||||| ||| ||||||||||||||| |
|
|
| T |
11647257 |
gattcgaaccccaaaccttgcatatattatgcattgtccttaccaactgagttaa |
11647203 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 140 - 196
Target Start/End: Complemental strand, 31545929 - 31545872
Alignment:
| Q |
140 |
ttcgaacctcaaatcttgcatatattatgcattatcct-accaactgagttaaactca |
196 |
Q |
| |
|
||||||||| || |||||||||||||||||||||||| |||||||||||||| |||| |
|
|
| T |
31545929 |
ttcgaaccttgaaccttgcatatattatgcattatcctaaccaactgagttaagctca |
31545872 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 136 - 196
Target Start/End: Complemental strand, 40446045 - 40445984
Alignment:
| Q |
136 |
gagattcgaacctcaaatcttgcatatattatgcattatcc-taccaactgagttaaactca |
196 |
Q |
| |
|
|||||| |||||||| | ||||||||||||||||||| ||| || ||||||||||||||||| |
|
|
| T |
40446045 |
gagatttgaacctcagaccttgcatatattatgcattgtccttatcaactgagttaaactca |
40445984 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 139 - 196
Target Start/End: Original strand, 42854322 - 42854379
Alignment:
| Q |
139 |
attcgaacctcaaatcttgcatatattatgcattatcctaccaactgagttaaactca |
196 |
Q |
| |
|
|||||||||||||| ||| ||||||||||||||| ||| |||| ||||||||| |||| |
|
|
| T |
42854322 |
attcgaacctcaaaccttacatatattatgcattgtccaaccagctgagttaagctca |
42854379 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 154 - 196
Target Start/End: Complemental strand, 20258589 - 20258546
Alignment:
| Q |
154 |
cttgcatatattatgcattatcc-taccaactgagttaaactca |
196 |
Q |
| |
|
||||||||||||||||||||||| ||||||||||||||| |||| |
|
|
| T |
20258589 |
cttgcatatattatgcattatccataccaactgagttaacctca |
20258546 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 155 - 196
Target Start/End: Original strand, 2642781 - 2642823
Alignment:
| Q |
155 |
ttgcatatattatgcattat-cctaccaactgagttaaactca |
196 |
Q |
| |
|
|||||||||||||||||||| |||||||||| ||||||||||| |
|
|
| T |
2642781 |
ttgcatatattatgcattatccctaccaactaagttaaactca |
2642823 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 154 - 196
Target Start/End: Complemental strand, 5015324 - 5015282
Alignment:
| Q |
154 |
cttgcatatattatgcattatcctaccaactgagttaaactca |
196 |
Q |
| |
|
|||||||||||||| |||| |||||||||||||| |||||||| |
|
|
| T |
5015324 |
cttgcatatattattcattgtcctaccaactgagctaaactca |
5015282 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 135 - 196
Target Start/End: Original strand, 6237717 - 6237779
Alignment:
| Q |
135 |
tgagattcgaacctcaaatcttgcatatattatgcattat-cctaccaactgagttaaactca |
196 |
Q |
| |
|
|||| |||||||| | |||||||||||||||||||||| | ||| |||||| ||||||||||| |
|
|
| T |
6237717 |
tgagtttcgaaccccgaatcttgcatatattatgcattgtccctgccaacttagttaaactca |
6237779 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 158 - 196
Target Start/End: Original strand, 14951676 - 14951714
Alignment:
| Q |
158 |
catatattatgcattatcctaccaactgagttaaactca |
196 |
Q |
| |
|
|||||| ||||||||||||||| |||||||||||||||| |
|
|
| T |
14951676 |
catatagtatgcattatcctactaactgagttaaactca |
14951714 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 138 - 191
Target Start/End: Original strand, 17145349 - 17145403
Alignment:
| Q |
138 |
gattcgaacctcaaatcttgcatatattatgcattatc-ctaccaactgagttaa |
191 |
Q |
| |
|
||||||||||||| |||||||||||||||| |||| || ||||||||||||||| |
|
|
| T |
17145349 |
gattcgaacctcagatcttgcatatattatacattgtctttaccaactgagttaa |
17145403 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #13
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 140 - 196
Target Start/End: Original strand, 5107248 - 5107305
Alignment:
| Q |
140 |
ttcgaacctcaaatcttgcatatattatgcatta-tcctaccaactgagttaaactca |
196 |
Q |
| |
|
|||||||||| | |||||||||||||||||||| || ||||||||||||||| |||| |
|
|
| T |
5107248 |
ttcgaacctcggaccttgcatatattatgcattattcataccaactgagttaagctca |
5107305 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 138 - 186
Target Start/End: Original strand, 16752503 - 16752552
Alignment:
| Q |
138 |
gattcgaacctcaaatcttgcatatattatgcattatcc-taccaactga |
186 |
Q |
| |
|
|||||||||| | |||||||||||||||||||||| ||| |||||||||| |
|
|
| T |
16752503 |
gattcgaaccccgaatcttgcatatattatgcattgtccttaccaactga |
16752552 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 152 - 196
Target Start/End: Complemental strand, 17046380 - 17046335
Alignment:
| Q |
152 |
atcttgcatatattatgcattatcc-taccaactgagttaaactca |
196 |
Q |
| |
|
||||||||||||||||||||| ||| ||||||||||||||| |||| |
|
|
| T |
17046380 |
atcttgcatatattatgcattgtccataccaactgagttaagctca |
17046335 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 155 - 191
Target Start/End: Complemental strand, 31198752 - 31198715
Alignment:
| Q |
155 |
ttgcatatattatgcattatcc-taccaactgagttaa |
191 |
Q |
| |
|
|||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
31198752 |
ttgcatatattatgcattatccttaccaactgagttaa |
31198715 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 132 - 177
Target Start/End: Original strand, 36683465 - 36683510
Alignment:
| Q |
132 |
gtctgagattcgaacctcaaatcttgcatatattatgcattatcct |
177 |
Q |
| |
|
||||| |||||||||| || ||||||||||||||||||||| |||| |
|
|
| T |
36683465 |
gtctgggattcgaaccccatatcttgcatatattatgcattgtcct |
36683510 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 143 - 190
Target Start/End: Complemental strand, 3389217 - 3389169
Alignment:
| Q |
143 |
gaacctcaaatcttgcatatattatgcattatcc-taccaactgagtta |
190 |
Q |
| |
|
||||| || ||||||||||||||||||||| ||| |||||||||||||| |
|
|
| T |
3389217 |
gaaccccagatcttgcatatattatgcattgtccataccaactgagtta |
3389169 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 51
Target Start/End: Complemental strand, 3935589 - 3935561
Alignment:
| Q |
23 |
ctacattttgcatgactttgaagaatagt |
51 |
Q |
| |
|
||||||||||||||||||||||||||||| |
|
|
| T |
3935589 |
ctacattttgcatgactttgaagaatagt |
3935561 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 149 - 196
Target Start/End: Complemental strand, 7713581 - 7713533
Alignment:
| Q |
149 |
caaatcttgcatatattatgcatta-tcctaccaactgagttaaactca |
196 |
Q |
| |
|
|||| |||||||||||||||||||| || || ||||||||||||||||| |
|
|
| T |
7713581 |
caaaccttgcatatattatgcattattcatatcaactgagttaaactca |
7713533 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 136 - 187
Target Start/End: Original strand, 11844437 - 11844489
Alignment:
| Q |
136 |
gagattcgaacctcaaatcttgcatatattatgcattatcc-taccaactgag |
187 |
Q |
| |
|
|||||||||||| ||| ||||||||||||||||||| ||| ||||||||||| |
|
|
| T |
11844437 |
gagattcgaaccctaaaccttgcatatattatgcattgtccttaccaactgag |
11844489 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 154 - 201
Target Start/End: Original strand, 19068456 - 19068504
Alignment:
| Q |
154 |
cttgcatatattatgcattatcc-taccaactgagttaaactcataaga |
201 |
Q |
| |
|
||||||||||||||||||||||| ||||||||||| ||| |||| |||| |
|
|
| T |
19068456 |
cttgcatatattatgcattatccataccaactgagctaagctcaaaaga |
19068504 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 137 - 196
Target Start/End: Complemental strand, 43108630 - 43108570
Alignment:
| Q |
137 |
agattcgaacctcaaatcttgcatatattatgcattatcc-taccaactgagttaaactca |
196 |
Q |
| |
|
||||||||||| || ||||||||||||||||||| ||| ||||||||||||||| |||| |
|
|
| T |
43108630 |
agattcgaaccctgaaccttgcatatattatgcattgtccttaccaactgagttaagctca |
43108570 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 21)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 138 - 196
Target Start/End: Original strand, 35126270 - 35126329
Alignment:
| Q |
138 |
gattcgaacctcaaatcttgcatatattatgcattat-cctaccaactgagttaaactca |
196 |
Q |
| |
|
|||| ||||| || ||||||||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
35126270 |
gatttgaaccccagatcttgcatatattatgcattatccctaccaactgagttaaactca |
35126329 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 140 - 196
Target Start/End: Original strand, 5702181 - 5702237
Alignment:
| Q |
140 |
ttcgaacctcaaatcttgcatatattatgcattatcctaccaactgagttaaactca |
196 |
Q |
| |
|
||||||||||||| ||||||||||||||||||| || ||||||||||| ||| |||| |
|
|
| T |
5702181 |
ttcgaacctcaaaccttgcatatattatgcattgtcttaccaactgagctaagctca |
5702237 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 138 - 196
Target Start/End: Complemental strand, 17588422 - 17588363
Alignment:
| Q |
138 |
gattcgaacctcaaatcttgcatatattatgcattatcc-taccaactgagttaaactca |
196 |
Q |
| |
|
|||||||||| || ||||||||||||||||||||| ||| ||||||||||||||| |||| |
|
|
| T |
17588422 |
gattcgaaccccagatcttgcatatattatgcattgtccttaccaactgagttaagctca |
17588363 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 138 - 191
Target Start/End: Complemental strand, 14771391 - 14771337
Alignment:
| Q |
138 |
gattcgaacctcaaatcttgcatatattatgcattat-cctaccaactgagttaa |
191 |
Q |
| |
|
||||||||||||| | ||||||||||||||||||||| ||||| ||||||||||| |
|
|
| T |
14771391 |
gattcgaacctcagaccttgcatatattatgcattatgcctactaactgagttaa |
14771337 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 139 - 196
Target Start/End: Complemental strand, 22486742 - 22486684
Alignment:
| Q |
139 |
attcgaacctcaaatcttgcatatattatgcatt-atcctaccaactgagttaaactca |
196 |
Q |
| |
|
||||||||| |||||||||||||||||||||||| || ||||||||||||||| |||| |
|
|
| T |
22486742 |
attcgaaccccaaatcttgcatatattatgcattgttcttaccaactgagttaagctca |
22486684 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 136 - 197
Target Start/End: Original strand, 39869806 - 39869868
Alignment:
| Q |
136 |
gagattcgaacctcaaatcttgcatatattatgcattatcc-taccaactgagttaaactcat |
197 |
Q |
| |
|
|||||||||||||| | |||| |||||||||||||| ||| ||||||||||||||||||||| |
|
|
| T |
39869806 |
gagattcgaacctcggaccttgtatatattatgcattgtccttaccaactgagttaaactcat |
39869868 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 140 - 197
Target Start/End: Original strand, 54230102 - 54230160
Alignment:
| Q |
140 |
ttcgaacctcaaatcttgcatatattatgcattatcc-taccaactgagttaaactcat |
197 |
Q |
| |
|
|||||||| |||| ||||||||||||||||||| ||| ||||||||||| ||||||||| |
|
|
| T |
54230102 |
ttcgaaccccaaaccttgcatatattatgcattgtccttaccaactgagctaaactcat |
54230160 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 134 - 198
Target Start/End: Complemental strand, 43815580 - 43815515
Alignment:
| Q |
134 |
ctgagattcgaacctcaaatcttgcatatattatgcattatc-ctaccaactgagttaaactcata |
198 |
Q |
| |
|
|||||||||||||| | ||||||||||| ||||||||| || |||||||||||||||||||||| |
|
|
| T |
43815580 |
ctgagattcgaaccatagatcttgcatatgttatgcattgtcattaccaactgagttaaactcata |
43815515 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 140 - 196
Target Start/End: Original strand, 53681880 - 53681937
Alignment:
| Q |
140 |
ttcgaacctcaaatcttgcatatattatgcatt-atcctaccaactgagttaaactca |
196 |
Q |
| |
|
||||||||||||||||||||||||||||||||| || ||||||||||| ||| |||| |
|
|
| T |
53681880 |
ttcgaacctcaaatcttgcatatattatgcattgttcttaccaactgaggtaagctca |
53681937 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 140 - 192
Target Start/End: Original strand, 26610496 - 26610548
Alignment:
| Q |
140 |
ttcgaacctcaaatcttgcatatattatgcattatcctaccaactgagttaaa |
192 |
Q |
| |
|
|||||||| || | ||| ||||||||||||||| ||||||||||||||||||| |
|
|
| T |
26610496 |
ttcgaaccccataccttacatatattatgcattgtcctaccaactgagttaaa |
26610548 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 140 - 187
Target Start/End: Complemental strand, 48688172 - 48688125
Alignment:
| Q |
140 |
ttcgaacctcaaatcttgcatatattatgcattatcctaccaactgag |
187 |
Q |
| |
|
||||||||||||| ||| ||||||||||||||| || ||||||||||| |
|
|
| T |
48688172 |
ttcgaacctcaaaccttacatatattatgcattgtcataccaactgag |
48688125 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 154 - 201
Target Start/End: Original strand, 48849780 - 48849827
Alignment:
| Q |
154 |
cttgcatatattatgcattatcctaccaactgagttaaactcataaga |
201 |
Q |
| |
|
||||||||||||||||||| || ||||||||||||||| |||| |||| |
|
|
| T |
48849780 |
cttgcatatattatgcattgtcataccaactgagttaagctcacaaga |
48849827 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 197
Target Start/End: Original strand, 21914074 - 21914132
Alignment:
| Q |
140 |
ttcgaacctcaaatcttgcatatattatgcattatcc-taccaactgagttaaactcat |
197 |
Q |
| |
|
|||||||| || | ||||||||||||||||||| ||| ||||||||||||||| ||||| |
|
|
| T |
21914074 |
ttcgaaccccataccttgcatatattatgcattgtccttaccaactgagttaagctcat |
21914132 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 143 - 191
Target Start/End: Complemental strand, 2078295 - 2078246
Alignment:
| Q |
143 |
gaacctcaaatcttgcatatattatgcattatc-ctaccaactgagttaa |
191 |
Q |
| |
|
||||| |||| ||||||||||||||||||| || |||||||||||||||| |
|
|
| T |
2078295 |
gaaccccaaaccttgcatatattatgcattgtctctaccaactgagttaa |
2078246 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 152 - 196
Target Start/End: Original strand, 10922323 - 10922368
Alignment:
| Q |
152 |
atcttgcatatattatgcattat-cctaccaactgagttaaactca |
196 |
Q |
| |
|
||||||||||||||||||||| | ||||||||||||||||| |||| |
|
|
| T |
10922323 |
atcttgcatatattatgcattgtccctaccaactgagttaagctca |
10922368 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 152 - 196
Target Start/End: Complemental strand, 19883133 - 19883088
Alignment:
| Q |
152 |
atcttgcatatattatgcattatcc-taccaactgagttaaactca |
196 |
Q |
| |
|
||||||||||| ||||||||||||| |||||||| ||||||||||| |
|
|
| T |
19883133 |
atcttgcatattttatgcattatccataccaactaagttaaactca |
19883088 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 3 - 51
Target Start/End: Complemental strand, 25770638 - 25770589
Alignment:
| Q |
3 |
ggttgaatatatttttgttc-ctacattttgcatgactttgaagaatagt |
51 |
Q |
| |
|
|||| |||||||||||| || ||||||||||| ||||||||||||||||| |
|
|
| T |
25770638 |
ggttaaatatatttttgatctctacattttgcgtgactttgaagaatagt |
25770589 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 140 - 196
Target Start/End: Original strand, 27397615 - 27397672
Alignment:
| Q |
140 |
ttcgaacctcaaatcttgcatatattatgcattatcc-taccaactgagttaaactca |
196 |
Q |
| |
|
||||||||| | | |||||||||||||| |||| ||| |||||||||||||||||||| |
|
|
| T |
27397615 |
ttcgaaccttagaccttgcatatattatacattgtccataccaactgagttaaactca |
27397672 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 140 - 177
Target Start/End: Complemental strand, 30200884 - 30200847
Alignment:
| Q |
140 |
ttcgaacctcaaatcttgcatatattatgcattatcct |
177 |
Q |
| |
|
||||||||||||| ||||||||||||||||||| |||| |
|
|
| T |
30200884 |
ttcgaacctcaaaccttgcatatattatgcattgtcct |
30200847 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 136 - 200
Target Start/End: Complemental strand, 51505935 - 51505870
Alignment:
| Q |
136 |
gagattcgaacctcaaatcttgcatatattatgcattatcc-taccaactgagttaaactcataag |
200 |
Q |
| |
|
|||||||||| | |||| ||||||||| ||||||||| ||| || |||||||| |||||||||||| |
|
|
| T |
51505935 |
gagattcgaatcccaaaccttgcatattttatgcattgtccatatcaactgagctaaactcataag |
51505870 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 152 - 196
Target Start/End: Original strand, 51882215 - 51882260
Alignment:
| Q |
152 |
atcttgcatatattatgcattatcc-taccaactgagttaaactca |
196 |
Q |
| |
|
||||||||||||||||||||| ||| ||||||||||||||| |||| |
|
|
| T |
51882215 |
atcttgcatatattatgcattgtccataccaactgagttaagctca |
51882260 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 29)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 138 - 196
Target Start/End: Original strand, 19396192 - 19396251
Alignment:
| Q |
138 |
gattcgaacctcaaatcttgcatatattatgcattat-cctaccaactgagttaaactca |
196 |
Q |
| |
|
||||| ||| ||||| ||||||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
19396192 |
gattcaaacatcaaaccttgcatatattatgcattatccctaccaactgagttaaactca |
19396251 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 138 - 196
Target Start/End: Complemental strand, 24631899 - 24631840
Alignment:
| Q |
138 |
gattcgaacctcaaatcttgcatatattatgcattatcc-taccaactgagttaaactca |
196 |
Q |
| |
|
||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
24631899 |
gattcgaaccttggatcttgcatatattatgcattatccttaccaactgagttaaactca |
24631840 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 139 - 196
Target Start/End: Complemental strand, 23460535 - 23460478
Alignment:
| Q |
139 |
attcgaacctcaaatcttgcatatattatgcattatcctaccaactgagttaaactca |
196 |
Q |
| |
|
|||||||||||||| ||||||||| ||||||||||| ||||||||| || |||||||| |
|
|
| T |
23460535 |
attcgaacctcaaaccttgcatattttatgcattattctaccaacttagctaaactca |
23460478 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 140 - 187
Target Start/End: Original strand, 9872108 - 9872156
Alignment:
| Q |
140 |
ttcgaacctcaaatcttgcatatattatgcattatcc-taccaactgag |
187 |
Q |
| |
|
|||||||| |||| ||||||||||||||||||||||| ||||||||||| |
|
|
| T |
9872108 |
ttcgaaccgcaaaccttgcatatattatgcattatccttaccaactgag |
9872156 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 132 - 191
Target Start/End: Complemental strand, 30248120 - 30248060
Alignment:
| Q |
132 |
gtctgagattcgaacctcaaatcttgcatatattatgcattat-cctaccaactgagttaa |
191 |
Q |
| |
|
||||||||||| || ||||||||| ||||||||||||||||| ||| ||||||||||||| |
|
|
| T |
30248120 |
gtctgagattcaaatatcaaatcttacatatattatgcattatccctgccaactgagttaa |
30248060 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 153 - 196
Target Start/End: Complemental strand, 40618955 - 40618911
Alignment:
| Q |
153 |
tcttgcatatattatgcattatc-ctaccaactgagttaaactca |
196 |
Q |
| |
|
||||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
40618955 |
tcttgcatatattatgcattatctttaccaactgagttaaactca |
40618911 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 154 - 196
Target Start/End: Complemental strand, 1854313 - 1854270
Alignment:
| Q |
154 |
cttgcatatattatgcattat-cctaccaactgagttaaactca |
196 |
Q |
| |
|
||||||| ||||||||||||| |||||||||||||||||||||| |
|
|
| T |
1854313 |
cttgcatctattatgcattattcctaccaactgagttaaactca |
1854270 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 154 - 196
Target Start/End: Original strand, 6000160 - 6000203
Alignment:
| Q |
154 |
cttgcatatattatgcattatcct-accaactgagttaaactca |
196 |
Q |
| |
|
||||||||||||||||||| |||| ||||||||||||||||||| |
|
|
| T |
6000160 |
cttgcatatattatgcattgtcctaaccaactgagttaaactca |
6000203 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 136 - 175
Target Start/End: Original strand, 28979275 - 28979314
Alignment:
| Q |
136 |
gagattcgaacctcaaatcttgcatatattatgcattatc |
175 |
Q |
| |
|
|||||| ||||||| ||||||||||||||||||||||||| |
|
|
| T |
28979275 |
gagatttgaacctcgaatcttgcatatattatgcattatc |
28979314 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 144 - 194
Target Start/End: Original strand, 30433515 - 30433566
Alignment:
| Q |
144 |
aacctcaaatcttgcatatattatgcattatc-ctaccaactgagttaaact |
194 |
Q |
| |
|
|||||||||||||| |||||||||| |||||| ||| ||||||||||||||| |
|
|
| T |
30433515 |
aacctcaaatcttgtatatattatgtattatctctatcaactgagttaaact |
30433566 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 154 - 196
Target Start/End: Original strand, 47719124 - 47719167
Alignment:
| Q |
154 |
cttgcatatattatgcattatcc-taccaactgagttaaactca |
196 |
Q |
| |
|
||||||||||||||||||||||| ||||||||||||||| |||| |
|
|
| T |
47719124 |
cttgcatatattatgcattatccttaccaactgagttaagctca |
47719167 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 154 - 196
Target Start/End: Complemental strand, 49868055 - 49868012
Alignment:
| Q |
154 |
cttgcatatattatgcattatcc-taccaactgagttaaactca |
196 |
Q |
| |
|
||||||||||||||||||||||| || ||||||||||||||||| |
|
|
| T |
49868055 |
cttgcatatattatgcattatccatatcaactgagttaaactca |
49868012 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 155 - 196
Target Start/End: Complemental strand, 3431373 - 3431331
Alignment:
| Q |
155 |
ttgcatatattatgcattat-cctaccaactgagttaaactca |
196 |
Q |
| |
|
|||||||||||||||||| | |||||||||||||||||||||| |
|
|
| T |
3431373 |
ttgcatatattatgcattcttcctaccaactgagttaaactca |
3431331 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 196
Target Start/End: Original strand, 12852208 - 12852262
Alignment:
| Q |
143 |
gaacctcaaatcttgcatatattatgcattat-cctaccaactgagttaaactca |
196 |
Q |
| |
|
||||| || ||||| ||||||||||||||||| ||||||||||||||||| |||| |
|
|
| T |
12852208 |
gaaccccagatcttacatatattatgcattatccctaccaactgagttaacctca |
12852262 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 155 - 196
Target Start/End: Complemental strand, 29936026 - 29935984
Alignment:
| Q |
155 |
ttgcatatattatgcattatcc-taccaactgagttaaactca |
196 |
Q |
| |
|
|||||||||||||||||| ||| |||||||||||||||||||| |
|
|
| T |
29936026 |
ttgcatatattatgcattgtccataccaactgagttaaactca |
29935984 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 196
Target Start/End: Complemental strand, 41974816 - 41974762
Alignment:
| Q |
143 |
gaacctcaaatcttgcatatattatgcattat-cctaccaactgagttaaactca |
196 |
Q |
| |
|
|||||||||| ||||||||||||||||||||| |||| ||||||| |||||||| |
|
|
| T |
41974816 |
gaacctcaaaccttgcatatattatgcattatccctatcaactgaactaaactca |
41974762 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 154 - 187
Target Start/End: Complemental strand, 10385332 - 10385299
Alignment:
| Q |
154 |
cttgcatatattatgcattatcctaccaactgag |
187 |
Q |
| |
|
||||||||||||||||||||||||| |||||||| |
|
|
| T |
10385332 |
cttgcatatattatgcattatcctatcaactgag |
10385299 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 144 - 196
Target Start/End: Original strand, 28039867 - 28039920
Alignment:
| Q |
144 |
aacctcaaatcttgcatatattatgcattatcc-taccaactgagttaaactca |
196 |
Q |
| |
|
||||||| | ||||||||||||||||||| ||| ||||||||||||||| |||| |
|
|
| T |
28039867 |
aacctcagaccttgcatatattatgcattgtccttaccaactgagttaagctca |
28039920 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 155 - 196
Target Start/End: Original strand, 33437656 - 33437697
Alignment:
| Q |
155 |
ttgcatatattatgcattatcctaccaactgagttaaactca |
196 |
Q |
| |
|
|||||||||||||| ||| |||||||||||||||||| |||| |
|
|
| T |
33437656 |
ttgcatatattatgtattgtcctaccaactgagttaagctca |
33437697 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 136 - 177
Target Start/End: Original strand, 34808562 - 34808603
Alignment:
| Q |
136 |
gagattcgaacctcaaatcttgcatatattatgcattatcct |
177 |
Q |
| |
|
|||||||||||||| || ||||||||||||||||||| |||| |
|
|
| T |
34808562 |
gagattcgaacctcgaaccttgcatatattatgcattgtcct |
34808603 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 140 - 177
Target Start/End: Complemental strand, 42416861 - 42416824
Alignment:
| Q |
140 |
ttcgaacctcaaatcttgcatatattatgcattatcct |
177 |
Q |
| |
|
|||||||| |||| |||||||||||||||||||||||| |
|
|
| T |
42416861 |
ttcgaaccccaaaccttgcatatattatgcattatcct |
42416824 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 14 - 51
Target Start/End: Original strand, 42723135 - 42723172
Alignment:
| Q |
14 |
tttttgttcctacattttgcatgactttgaagaatagt |
51 |
Q |
| |
|
||||||| |||||||||||| ||||||||||||||||| |
|
|
| T |
42723135 |
tttttgtccctacattttgcttgactttgaagaatagt |
42723172 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 149 - 196
Target Start/End: Complemental strand, 8153184 - 8153136
Alignment:
| Q |
149 |
caaatcttgcatatattatgcattatcc-taccaactgagttaaactca |
196 |
Q |
| |
|
|||||||| ||||||||||||||| || |||||||||||||||||||| |
|
|
| T |
8153184 |
caaatcttacatatattatgcattgtctataccaactgagttaaactca |
8153136 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 140 - 191
Target Start/End: Original strand, 18056719 - 18056771
Alignment:
| Q |
140 |
ttcgaacctcaaatcttgcatatattatgcattatcc-taccaactgagttaa |
191 |
Q |
| |
|
||||||||||| | |||||||||||||||||| ||| ||||||||||||||| |
|
|
| T |
18056719 |
ttcgaacctcacacattgcatatattatgcattgtccttaccaactgagttaa |
18056771 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 51
Target Start/End: Complemental strand, 19895712 - 19895668
Alignment:
| Q |
8 |
aatatatttttgttcc-tacattttgcatgactttgaagaatagt |
51 |
Q |
| |
|
|||||||||||| ||| ||||||||||| |||||||||||||||| |
|
|
| T |
19895712 |
aatatatttttgatccctacattttgcaagactttgaagaatagt |
19895668 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 138 - 201
Target Start/End: Original strand, 28832172 - 28832236
Alignment:
| Q |
138 |
gattcgaacctcaaatcttgcatatattatgcatt-atcctaccaactgagttaaactcataaga |
201 |
Q |
| |
|
|||| |||||||| | ||||||||||||||||||| || ||||||||||||||| |||| |||| |
|
|
| T |
28832172 |
gatttgaacctcagaccttgcatatattatgcattgttcataccaactgagttaagctcacaaga |
28832236 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 149 - 196
Target Start/End: Original strand, 37014191 - 37014239
Alignment:
| Q |
149 |
caaatcttgcatatattatgcattatcc-taccaactgagttaaactca |
196 |
Q |
| |
|
||||||||| ||||||||||||||| || ||||||||||||||| |||| |
|
|
| T |
37014191 |
caaatcttgtatatattatgcattaaccataccaactgagttaatctca |
37014239 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 156 - 191
Target Start/End: Original strand, 41972749 - 41972785
Alignment:
| Q |
156 |
tgcatatattatgcattat-cctaccaactgagttaa |
191 |
Q |
| |
|
||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
41972749 |
tgcatatattatgcattatccctaccaactgagttaa |
41972785 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 140 - 172
Target Start/End: Original strand, 52853033 - 52853065
Alignment:
| Q |
140 |
ttcgaacctcaaatcttgcatatattatgcatt |
172 |
Q |
| |
|
|||||||||||||||||| |||||||||||||| |
|
|
| T |
52853033 |
ttcgaacctcaaatcttgtatatattatgcatt |
52853065 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 37; Significance: 0.000000000005; HSPs: 17)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 138 - 197
Target Start/End: Original strand, 8984495 - 8984555
Alignment:
| Q |
138 |
gattcgaacctcaaatcttgcatatattatgcattatcc-taccaactgagttaaactcat |
197 |
Q |
| |
|
||||||||| ||||| |||||||||||||| |||||||| ||||||||||||||| ||||| |
|
|
| T |
8984495 |
gattcgaacatcaaaccttgcatatattatacattatccataccaactgagttaagctcat |
8984555 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 134 - 195
Target Start/End: Original strand, 1230658 - 1230720
Alignment:
| Q |
134 |
ctgagattcgaacctcaaatcttgcatatattatgcatt-atcctaccaactgagttaaactc |
195 |
Q |
| |
|
||||| || |||||||||| ||| ||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
1230658 |
ctgagttttgaacctcaaaccttacatatattatgcattgttcctaccaactgagttaaactc |
1230720 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 138 - 186
Target Start/End: Complemental strand, 9067142 - 9067093
Alignment:
| Q |
138 |
gattcgaacctcaaatcttgcatatattatgcattatcc-taccaactga |
186 |
Q |
| |
|
||||||||||||| |||||||||| |||||||||||||| |||||||||| |
|
|
| T |
9067142 |
gattcgaacctcagatcttgcataaattatgcattatccttaccaactga |
9067093 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 143 - 195
Target Start/End: Original strand, 42575968 - 42576021
Alignment:
| Q |
143 |
gaacctcaaatcttgcatatattatgcattatcc-taccaactgagttaaactc |
195 |
Q |
| |
|
|||||||||| |||||||||||||||||||||| |||| |||||||||||||| |
|
|
| T |
42575968 |
gaacctcaaacattgcatatattatgcattatccataccgactgagttaaactc |
42576021 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 149 - 201
Target Start/End: Original strand, 12674877 - 12674929
Alignment:
| Q |
149 |
caaatcttgcatatattatgcattatcctaccaactgagttaaactcataaga |
201 |
Q |
| |
|
|||||||||||||||||||| ||| |||||||||||||| ||| || |||||| |
|
|
| T |
12674877 |
caaatcttgcatatattatgtattgtcctaccaactgagctaagcttataaga |
12674929 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 155 - 197
Target Start/End: Original strand, 989595 - 989638
Alignment:
| Q |
155 |
ttgcatatattatgcattatcc-taccaactgagttaaactcat |
197 |
Q |
| |
|
|||||||||||| ||||||||| ||||||||||||||||||||| |
|
|
| T |
989595 |
ttgcatatattaggcattatccctaccaactgagttaaactcat |
989638 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 154 - 196
Target Start/End: Complemental strand, 6447233 - 6447190
Alignment:
| Q |
154 |
cttgcatatattatgcattatcc-taccaactgagttaaactca |
196 |
Q |
| |
|
||||||||||||||||||| ||| |||||||||||||||||||| |
|
|
| T |
6447233 |
cttgcatatattatgcattgtccataccaactgagttaaactca |
6447190 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 154 - 196
Target Start/End: Complemental strand, 7553723 - 7553680
Alignment:
| Q |
154 |
cttgcatatattatgcattatcc-taccaactgagttaaactca |
196 |
Q |
| |
|
||||||||||||||||||| ||| |||||||||||||||||||| |
|
|
| T |
7553723 |
cttgcatatattatgcattgtccctaccaactgagttaaactca |
7553680 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 154 - 196
Target Start/End: Original strand, 37999437 - 37999480
Alignment:
| Q |
154 |
cttgcatatattatgcattatcc-taccaactgagttaaactca |
196 |
Q |
| |
|
||||||||||||||||||||||| ||||||||||||||| |||| |
|
|
| T |
37999437 |
cttgcatatattatgcattatccataccaactgagttaagctca |
37999480 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 155 - 196
Target Start/End: Complemental strand, 37938538 - 37938496
Alignment:
| Q |
155 |
ttgcatatattatgcattatcc-taccaactgagttaaactca |
196 |
Q |
| |
|
|||||||||||||||||||||| ||||||||||| |||||||| |
|
|
| T |
37938538 |
ttgcatatattatgcattatccataccaactgagctaaactca |
37938496 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 138 - 184
Target Start/End: Complemental strand, 45396624 - 45396578
Alignment:
| Q |
138 |
gattcgaacctcaaatcttgcatatattatgcattatcctaccaact |
184 |
Q |
| |
|
||||||||| ||| | ||||||||||||||||||| ||||||||||| |
|
|
| T |
45396624 |
gattcgaacttcagaccttgcatatattatgcattgtcctaccaact |
45396578 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #12
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 154 - 194
Target Start/End: Original strand, 7869658 - 7869699
Alignment:
| Q |
154 |
cttgcatatattatgcattatcct-accaactgagttaaact |
194 |
Q |
| |
|
||||||||||||||||||| |||| ||||||||||||||||| |
|
|
| T |
7869658 |
cttgcatatattatgcattgtcctcaccaactgagttaaact |
7869699 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #13
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 143 - 191
Target Start/End: Original strand, 8442493 - 8442542
Alignment:
| Q |
143 |
gaacctcaaatcttgcatatattatgcattatcc-taccaactgagttaa |
191 |
Q |
| |
|
|||||||| | ||||||||||||||||||| ||| ||||||||||||||| |
|
|
| T |
8442493 |
gaacctcagaccttgcatatattatgcattgtccttaccaactgagttaa |
8442542 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 3 - 51
Target Start/End: Original strand, 21005895 - 21005944
Alignment:
| Q |
3 |
ggttgaatatatttttgttcc-tacattttgcatgactttgaagaatagt |
51 |
Q |
| |
|
|||| |||||||||||| ||| |||||||||||| ||||||||||||||| |
|
|
| T |
21005895 |
ggttaaatatatttttggtccctacattttgcataactttgaagaatagt |
21005944 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 152 - 196
Target Start/End: Complemental strand, 23816836 - 23816791
Alignment:
| Q |
152 |
atcttgcatatattatgcattatcc-taccaactgagttaaactca |
196 |
Q |
| |
|
||||||||||||||||||||||||| ||||||||||| ||| |||| |
|
|
| T |
23816836 |
atcttgcatatattatgcattatccttaccaactgagctaagctca |
23816791 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 143 - 191
Target Start/End: Original strand, 24212162 - 24212211
Alignment:
| Q |
143 |
gaacctcaaatcttgcatatattatgcattatcc-taccaactgagttaa |
191 |
Q |
| |
|
||||| |||||||||||||||||||||||| ||| || |||||||||||| |
|
|
| T |
24212162 |
gaaccacaaatcttgcatatattatgcattgtccatagcaactgagttaa |
24212211 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 132 - 196
Target Start/End: Complemental strand, 33445636 - 33445571
Alignment:
| Q |
132 |
gtctgagattcgaacctcaaatcttgcatatattatgcatt-atcctaccaactgagttaaactca |
196 |
Q |
| |
|
||||||| |||||| |||||| |||| |||||||||||||| |||||||||||||| ||| |||| |
|
|
| T |
33445636 |
gtctgaggttcgaatctcaaaccttgtatatattatgcattgttcctaccaactgagctaagctca |
33445571 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 36; Significance: 0.00000000002; HSPs: 25)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 154 - 196
Target Start/End: Original strand, 20096287 - 20096330
Alignment:
| Q |
154 |
cttgcatatattatgcattat-cctaccaactgagttaaactca |
196 |
Q |
| |
|
||||||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
20096287 |
cttgcatatattatgcattatccctaccaactgagttaaactca |
20096330 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 138 - 196
Target Start/End: Original strand, 21052558 - 21052617
Alignment:
| Q |
138 |
gattcgaacctcaaatcttgcatatattatgcattatcc-taccaactgagttaaactca |
196 |
Q |
| |
|
||||||||||||| | ||||||||||||||| ||||||| ||||||||||| |||||||| |
|
|
| T |
21052558 |
gattcgaacctcataccttgcatatattatgtattatccataccaactgagctaaactca |
21052617 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 138 - 196
Target Start/End: Complemental strand, 23673160 - 23673102
Alignment:
| Q |
138 |
gattcgaacctcaaatcttgcatatattatgcattatcct-accaactgagttaaactca |
196 |
Q |
| |
|
|||||||||| |||||||| ||||||||||||||||| || ||||||||||||||||||| |
|
|
| T |
23673160 |
gattcgaacc-caaatcttacatatattatgcattattctcaccaactgagttaaactca |
23673102 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 138 - 196
Target Start/End: Complemental strand, 38416117 - 38416058
Alignment:
| Q |
138 |
gattcgaacctcaaatcttgcatatattatgcattatcc-taccaactgagttaaactca |
196 |
Q |
| |
|
||||||||||||| | ||||||||||||||||||||||| ||||||||||| ||| |||| |
|
|
| T |
38416117 |
gattcgaacctcataccttgcatatattatgcattatccttaccaactgagctaagctca |
38416058 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 154 - 196
Target Start/End: Complemental strand, 55430640 - 55430597
Alignment:
| Q |
154 |
cttgcatatattatgcattat-cctaccaactgagttaaactca |
196 |
Q |
| |
|
||||||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
55430640 |
cttgcatatattatgcattattcctaccaactgagttaaactca |
55430597 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 139 - 196
Target Start/End: Complemental strand, 30380589 - 30380531
Alignment:
| Q |
139 |
attcgaacctcaaatcttgcatatattatgcattatcc-taccaactgagttaaactca |
196 |
Q |
| |
|
||||||||| |||| |||||||||||||| |||| ||| |||||||||||||||||||| |
|
|
| T |
30380589 |
attcgaaccccaaaccttgcatatattatacattgtccttaccaactgagttaaactca |
30380531 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 152 - 196
Target Start/End: Original strand, 8027412 - 8027457
Alignment:
| Q |
152 |
atcttgcatatattatgcattatcc-taccaactgagttaaactca |
196 |
Q |
| |
|
||||||||||||||||||||||||| ||||||||||| |||||||| |
|
|
| T |
8027412 |
atcttgcatatattatgcattatccttaccaactgagctaaactca |
8027457 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 154 - 201
Target Start/End: Complemental strand, 56204991 - 56204943
Alignment:
| Q |
154 |
cttgcatatattatgcattatcct-accaactgagttaaactcataaga |
201 |
Q |
| |
|
||||||||||||||||||| |||| ||||||||||||||||||| |||| |
|
|
| T |
56204991 |
cttgcatatattatgcattgtccttaccaactgagttaaactcacaaga |
56204943 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 138 - 196
Target Start/End: Complemental strand, 51002347 - 51002288
Alignment:
| Q |
138 |
gattcgaacctcaaatcttgcatatattatgcattatc-ctaccaactgagttaaactca |
196 |
Q |
| |
|
||||||||||||||| ||||||||| ||||||||| || ||||||||||||||| |||| |
|
|
| T |
51002347 |
gattcgaacctcaaaccttgcatattttatgcattgtctataccaactgagttaagctca |
51002288 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 196
Target Start/End: Original strand, 3299100 - 3299154
Alignment:
| Q |
143 |
gaacctcaaatcttgcatatattatgcattatcct-accaactgagttaaactca |
196 |
Q |
| |
|
|||||||||| ||||||||||||||||||| | | ||||||||||||||||||| |
|
|
| T |
3299100 |
gaacctcaaaccttgcatatattatgcattgttttaaccaactgagttaaactca |
3299154 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 154 - 196
Target Start/End: Complemental strand, 5520176 - 5520134
Alignment:
| Q |
154 |
cttgcatatattatgcattatcctaccaactgagttaaactca |
196 |
Q |
| |
|
||||||||||||||||||| |||| ||||||||||||||||| |
|
|
| T |
5520176 |
cttgcatatattatgcattgtccttgcaactgagttaaactca |
5520134 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 140 - 197
Target Start/End: Complemental strand, 12058377 - 12058319
Alignment:
| Q |
140 |
ttcgaacctcaaatcttgcatatattatgcattatcc-taccaactgagttaaactcat |
197 |
Q |
| |
|
||||||||| || ||||||||||||||||||||||| |||| |||||| ||||||||| |
|
|
| T |
12058377 |
ttcgaaccttgaaccttgcatatattatgcattatccttaccgactgagctaaactcat |
12058319 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 196
Target Start/End: Original strand, 43034348 - 43034402
Alignment:
| Q |
143 |
gaacctcaaatcttgcatatattatgcattatcc-taccaactgagttaaactca |
196 |
Q |
| |
|
|||||||| | ||||||||||||||||||| ||| ||||||||||||||| |||| |
|
|
| T |
43034348 |
gaacctcagaccttgcatatattatgcattgtccataccaactgagttaagctca |
43034402 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 196
Target Start/End: Complemental strand, 43155134 - 43155080
Alignment:
| Q |
143 |
gaacctcaaatcttgcatatattatgcattatcc-taccaactgagttaaactca |
196 |
Q |
| |
|
|||||||| ||||||||||||||||||||||||| || |||||||| ||| |||| |
|
|
| T |
43155134 |
gaacctcagatcttgcatatattatgcattatccataacaactgagctaagctca |
43155080 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 154 - 196
Target Start/End: Original strand, 44200573 - 44200615
Alignment:
| Q |
154 |
cttgcatatattatgcattatcctaccaactgagttaaactca |
196 |
Q |
| |
|
||||||||| |||| |||||||||||||||||| ||||||||| |
|
|
| T |
44200573 |
cttgcatattttatacattatcctaccaactgaattaaactca |
44200615 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 51
Target Start/End: Complemental strand, 51906725 - 51906687
Alignment:
| Q |
13 |
atttttgttcctacattttgcatgactttgaagaatagt |
51 |
Q |
| |
|
||||| || |||||||||||||||||||||||||||||| |
|
|
| T |
51906725 |
attttggtccctacattttgcatgactttgaagaatagt |
51906687 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 22 - 51
Target Start/End: Original strand, 5544977 - 5545006
Alignment:
| Q |
22 |
cctacattttgcatgactttgaagaatagt |
51 |
Q |
| |
|
|||||||||||||||||||||||||||||| |
|
|
| T |
5544977 |
cctacattttgcatgactttgaagaatagt |
5545006 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 140 - 196
Target Start/End: Complemental strand, 19908750 - 19908693
Alignment:
| Q |
140 |
ttcgaacctcaaatcttgcatatattatgcattatcc-taccaactgagttaaactca |
196 |
Q |
| |
|
|||||||||| | ||||||||||||||||||| ||| ||||||||||||||| |||| |
|
|
| T |
19908750 |
ttcgaacctcggaccttgcatatattatgcattgtccttaccaactgagttaagctca |
19908693 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 140 - 196
Target Start/End: Complemental strand, 44221505 - 44221448
Alignment:
| Q |
140 |
ttcgaacctcaaatcttgcatatattatgcattatcc-taccaactgagttaaactca |
196 |
Q |
| |
|
||||||||||| | ||||||||||||||||||| ||| |||||||||| |||| |||| |
|
|
| T |
44221505 |
ttcgaacctcagaccttgcatatattatgcattgtccataccaactgaattaagctca |
44221448 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 132 - 196
Target Start/End: Original strand, 50442743 - 50442807
Alignment:
| Q |
132 |
gtctgagattcgaacctcaaatcttgcatatattatgcattat-cctaccaactgagttaaactca |
196 |
Q |
| |
|
||||| |||||||||| || | ||||||||||||||||||||| ||||||||||||| ||| |||| |
|
|
| T |
50442743 |
gtctgggattcgaacc-cagaccttgcatatattatgcattatccctaccaactgagctaagctca |
50442807 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 51
Target Start/End: Original strand, 3296722 - 3296766
Alignment:
| Q |
8 |
aatatatttttgttcc-tacattttgcatgactttgaagaatagt |
51 |
Q |
| |
|
|||||||||||| ||| |||||||||| ||||||||||||||||| |
|
|
| T |
3296722 |
aatatatttttgatccctacattttgcgtgactttgaagaatagt |
3296766 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 140 - 172
Target Start/End: Complemental strand, 6520129 - 6520097
Alignment:
| Q |
140 |
ttcgaacctcaaatcttgcatatattatgcatt |
172 |
Q |
| |
|
||||||||||||| ||||||||||||||||||| |
|
|
| T |
6520129 |
ttcgaacctcaaaccttgcatatattatgcatt |
6520097 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 140 - 172
Target Start/End: Complemental strand, 9990324 - 9990292
Alignment:
| Q |
140 |
ttcgaacctcaaatcttgcatatattatgcatt |
172 |
Q |
| |
|
||||||||||| ||||||||||||||||||||| |
|
|
| T |
9990324 |
ttcgaacctcagatcttgcatatattatgcatt |
9990292 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 149 - 200
Target Start/End: Original strand, 24063220 - 24063272
Alignment:
| Q |
149 |
caaatcttgcatatattatgcattatc-ctaccaactgagttaaactcataag |
200 |
Q |
| |
|
|||||||||||||||||||||||| || ||| |||||||||||| ||||||| |
|
|
| T |
24063220 |
caaatcttgcatatattatgcattgtctctatcaactgagttaagatcataag |
24063272 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 132 - 196
Target Start/End: Complemental strand, 25978383 - 25978319
Alignment:
| Q |
132 |
gtctgagattcgaacctcaaatcttgcatatattatgcattatcctaccaactgagttaaactca |
196 |
Q |
| |
|
||||| |||||||||||| | ||||||||||||||||||| |||| |||||||| ||| |||| |
|
|
| T |
25978383 |
gtctgggattcgaacctcggaccttgcatatattatgcattgtccttacaactgagctaagctca |
25978319 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 34; Significance: 0.0000000003; HSPs: 24)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 147 - 196
Target Start/End: Original strand, 18041186 - 18041235
Alignment:
| Q |
147 |
ctcaaatcttgcatatattatgcattatcctaccaactgagttaaactca |
196 |
Q |
| |
|
||||||||||| |||||| ||||||| |||||||| |||||||||||||| |
|
|
| T |
18041186 |
ctcaaatcttgtatatatcatgcattgtcctaccatctgagttaaactca |
18041235 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 140 - 196
Target Start/End: Complemental strand, 27152411 - 27152354
Alignment:
| Q |
140 |
ttcgaacctcaaatcttgcatatattatgcattat-cctaccaactgagttaaactca |
196 |
Q |
| |
|
|||||||| || | ||||||||||||||||||||| ||||||||||||||||| |||| |
|
|
| T |
27152411 |
ttcgaaccccagaccttgcatatattatgcattatccctaccaactgagttaagctca |
27152354 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 147 - 194
Target Start/End: Complemental strand, 22267564 - 22267516
Alignment:
| Q |
147 |
ctcaaatcttgcatatattatgcattatcc-taccaactgagttaaact |
194 |
Q |
| |
|
|||||| ||||||||||||||||||| ||| |||||||||||||||||| |
|
|
| T |
22267564 |
ctcaaaccttgcatatattatgcattgtccgtaccaactgagttaaact |
22267516 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 137 - 196
Target Start/End: Original strand, 34364495 - 34364555
Alignment:
| Q |
137 |
agattcgaacctcaaatcttgcatatattatgcatta-tcctaccaactgagttaaactca |
196 |
Q |
| |
|
|||||| |||| |||| |||| ||||||||||||||| ||||||||||| ||||||||||| |
|
|
| T |
34364495 |
agattctaaccccaaaccttgtatatattatgcattattcctaccaactaagttaaactca |
34364555 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 138 - 188
Target Start/End: Original strand, 231594 - 231645
Alignment:
| Q |
138 |
gattcgaacctcaaatcttgcatatattatgcattatcc-taccaactgagt |
188 |
Q |
| |
|
||||||||||||||| ||||||||||||||| ||| ||| |||||||||||| |
|
|
| T |
231594 |
gattcgaacctcaaaccttgcatatattatgtattgtccataccaactgagt |
231645 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 51
Target Start/End: Complemental strand, 2606562 - 2606524
Alignment:
| Q |
13 |
atttttgttcctacattttgcatgactttgaagaatagt |
51 |
Q |
| |
|
||||| ||||||| ||||||||||||||||||||||||| |
|
|
| T |
2606562 |
attttggttcctatattttgcatgactttgaagaatagt |
2606524 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 151 - 196
Target Start/End: Complemental strand, 11839743 - 11839697
Alignment:
| Q |
151 |
aatcttgcatatatt-atgcattatcctaccaactgagttaaactca |
196 |
Q |
| |
|
||||||||||||||| ||||||||||| |||||||||||||| |||| |
|
|
| T |
11839743 |
aatcttgcatatatttatgcattatccaaccaactgagttaagctca |
11839697 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 139 - 196
Target Start/End: Original strand, 36547237 - 36547295
Alignment:
| Q |
139 |
attcgaacctcaaatcttgcatatattatgcattatcc-taccaactgagttaaactca |
196 |
Q |
| |
|
|||||||||||||| ||||||||||||| |||||||| ||||||||||| ||| |||| |
|
|
| T |
36547237 |
attcgaacctcaaactttgcatatattatacattatccttaccaactgagctaagctca |
36547295 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 196
Target Start/End: Original strand, 40967377 - 40967431
Alignment:
| Q |
143 |
gaacctcaaatcttgcatatattatgcattatcc-taccaactgagttaaactca |
196 |
Q |
| |
|
|||||||||| ||||||||||||||||||| ||| || |||||||||||| |||| |
|
|
| T |
40967377 |
gaacctcaaaccttgcatatattatgcattgtccttatcaactgagttaagctca |
40967431 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 196
Target Start/End: Original strand, 43117196 - 43117250
Alignment:
| Q |
143 |
gaacctcaaatcttgcatatattatgcattatcc-taccaactgagttaaactca |
196 |
Q |
| |
|
|||||||| | ||||||||||||||||||| ||| ||||||||||| |||||||| |
|
|
| T |
43117196 |
gaacctcagaccttgcatatattatgcattgtccttaccaactgagctaaactca |
43117250 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #11
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 140 - 196
Target Start/End: Complemental strand, 2257029 - 2256972
Alignment:
| Q |
140 |
ttcgaacctcaaatcttgcatatattatgcattatcc-taccaactgagttaaactca |
196 |
Q |
| |
|
|||||||| || | ||||||||||||||||||| ||| ||||||||||||||| |||| |
|
|
| T |
2257029 |
ttcgaaccccagaccttgcatatattatgcattgtccataccaactgagttaagctca |
2256972 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #12
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 152 - 196
Target Start/End: Original strand, 18324909 - 18324954
Alignment:
| Q |
152 |
atcttgcatatattatgcattatcc-taccaactgagttaaactca |
196 |
Q |
| |
|
||||||||||||||||||||| ||| ||||||||||||||| |||| |
|
|
| T |
18324909 |
atcttgcatatattatgcattgtccttaccaactgagttaagctca |
18324954 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #13
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 140 - 196
Target Start/End: Complemental strand, 27935114 - 27935057
Alignment:
| Q |
140 |
ttcgaacctcaaatcttgcatatattatgcattatcc-taccaactgagttaaactca |
196 |
Q |
| |
|
|||||||||| | |||||||||||| |||||| ||| |||||||||||||||||||| |
|
|
| T |
27935114 |
ttcgaacctcgtaccttgcatatattctgcattgtccctaccaactgagttaaactca |
27935057 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 152 - 196
Target Start/End: Complemental strand, 28771628 - 28771583
Alignment:
| Q |
152 |
atcttgcatatattatgcattatcc-taccaactgagttaaactca |
196 |
Q |
| |
|
||||||||||||||||||||| ||| ||||||||||| |||||||| |
|
|
| T |
28771628 |
atcttgcatatattatgcattgtccttaccaactgagctaaactca |
28771583 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 139 - 187
Target Start/End: Complemental strand, 31156872 - 31156823
Alignment:
| Q |
139 |
attcgaacctcaaatcttgcatatattatgcattat-cctaccaactgag |
187 |
Q |
| |
|
||||||||| || ||||| ||||||||||||||||| ||||||||||||| |
|
|
| T |
31156872 |
attcgaaccccagatcttacatatattatgcattatccctaccaactgag |
31156823 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 154 - 198
Target Start/End: Original strand, 35685078 - 35685123
Alignment:
| Q |
154 |
cttgcatatattatgcattatcc-taccaactgagttaaactcata |
198 |
Q |
| |
|
||||||||||||||||||| ||| ||||||||||| |||||||||| |
|
|
| T |
35685078 |
cttgcatatattatgcattgtccttaccaactgagctaaactcata |
35685123 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 140 - 196
Target Start/End: Complemental strand, 35727495 - 35727438
Alignment:
| Q |
140 |
ttcgaacctcaaatcttgcatatattatgcatt-atcctaccaactgagttaaactca |
196 |
Q |
| |
|
|||||||| |||| ||||||||||||||||||| || ||||||||||||||| |||| |
|
|
| T |
35727495 |
ttcgaaccccaaaccttgcatatattatgcattgttcttaccaactgagttaagctca |
35727438 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 140 - 196
Target Start/End: Original strand, 37320520 - 37320577
Alignment:
| Q |
140 |
ttcgaacctcaaatcttgcatatattatgcattatc-ctaccaactgagttaaactca |
196 |
Q |
| |
|
|||||||||| || ||||||||||||||||||| || ||||||||||||||| |||| |
|
|
| T |
37320520 |
ttcgaacctcgaaccttgcatatattatgcattgtctttaccaactgagttaagctca |
37320577 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 154 - 197
Target Start/End: Original strand, 5168596 - 5168640
Alignment:
| Q |
154 |
cttgcatatattatgcattat-cctaccaactgagttaaactcat |
197 |
Q |
| |
|
||||||||||||||||||||| |||| |||||||||||| ||||| |
|
|
| T |
5168596 |
cttgcatatattatgcattatccctatcaactgagttaagctcat |
5168640 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 139 - 175
Target Start/End: Complemental strand, 12619403 - 12619367
Alignment:
| Q |
139 |
attcgaacctcaaatcttgcatatattatgcattatc |
175 |
Q |
| |
|
||||||||| || |||||||||||||||||||||||| |
|
|
| T |
12619403 |
attcgaaccccagatcttgcatatattatgcattatc |
12619367 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 51
Target Start/End: Original strand, 21267257 - 21267285
Alignment:
| Q |
23 |
ctacattttgcatgactttgaagaatagt |
51 |
Q |
| |
|
||||||||||||||||||||||||||||| |
|
|
| T |
21267257 |
ctacattttgcatgactttgaagaatagt |
21267285 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 152 - 191
Target Start/End: Complemental strand, 22359051 - 22359011
Alignment:
| Q |
152 |
atcttgcatatattatgcattatcc-taccaactgagttaa |
191 |
Q |
| |
|
||||||||||||||||||||| ||| ||||||||||||||| |
|
|
| T |
22359051 |
atcttgcatatattatgcattgtccttaccaactgagttaa |
22359011 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 154 - 197
Target Start/End: Complemental strand, 30978406 - 30978362
Alignment:
| Q |
154 |
cttgcatatattatgcattatcc-taccaactgagttaaactcat |
197 |
Q |
| |
|
||||||||||||||||||||||| |||||| |||| ||||||||| |
|
|
| T |
30978406 |
cttgcatatattatgcattatccataccaattgagctaaactcat |
30978362 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 156 - 196
Target Start/End: Complemental strand, 44558047 - 44558007
Alignment:
| Q |
156 |
tgcatatattatgcattatcctaccaactgagttaaactca |
196 |
Q |
| |
|
|||||| |||||||| | ||||||||||||||||||||||| |
|
|
| T |
44558047 |
tgcataaattatgcaatgtcctaccaactgagttaaactca |
44558007 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0007 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0007
Description:
Target: scaffold0007; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 155 - 200
Target Start/End: Original strand, 221031 - 221077
Alignment:
| Q |
155 |
ttgcatatattatgcattatcc-taccaactgagttaaactcataag |
200 |
Q |
| |
|
|||||||||||||| ||||||| ||||||||||| |||||||||||| |
|
|
| T |
221031 |
ttgcatatattatgtattatccctaccaactgagctaaactcataag |
221077 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0122 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0122
Description:
Target: scaffold0122; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 143 - 195
Target Start/End: Original strand, 31161 - 31214
Alignment:
| Q |
143 |
gaacctcaaatcttgcatatattatgcattatcc-taccaactgagttaaactc |
195 |
Q |
| |
|
||||| || ||||||||||||||||||||| ||| ||||||||||| ||||||| |
|
|
| T |
31161 |
gaaccgcagatcttgcatatattatgcattgtccataccaactgagctaaactc |
31214 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0001 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0001
Description:
Target: scaffold0001; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 196
Target Start/End: Complemental strand, 505064 - 505012
Alignment:
| Q |
144 |
aacctcaaatcttgcatatattatgcattatcctaccaactgagttaaactca |
196 |
Q |
| |
|
||||||| | ||||||||| ||||||||| |||||||||||||| ||| |||| |
|
|
| T |
505064 |
aacctcataccttgcatattttatgcattgtcctaccaactgagctaagctca |
505012 |
T |
|
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