View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19278_low_13 (Length: 237)
Name: NF19278_low_13
Description: NF19278
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19278_low_13 |
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Alignment Details
Target: chr8 (Bit Score: 199; Significance: 1e-108; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 1 - 219
Target Start/End: Original strand, 21600012 - 21600230
Alignment:
| Q |
1 |
ttaaagaagcacaaaccaatccgaatcaaattttgattgaagtaccaaagattggtgataatcctctggtaccacctccaaggtctgtcatggacaattg |
100 |
Q |
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|||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
21600012 |
ttaaggaagcacaaaccaatccgaatcaaattttgattgaagtaccagagattggtgataatcctctggtaccacctccaaggtctgtcatggacaattg |
21600111 |
T |
|
| Q |
101 |
agttgggatttggataaggatcaccaacccgctcccttgaaaagaggagtctggtgaccaatattcagaagatattctaggatttttacgtcttagaagg |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | || |||||||||||||||||| |
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| T |
21600112 |
agttgggatttggataaggatcaccaacccgctcccttgaaaagaggagtctggtgaccaatattcagaagatattatggggtttttacgtcttagaagg |
21600211 |
T |
|
| Q |
201 |
gtttagaaacatttgaaat |
219 |
Q |
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||||||||||||||||||| |
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| T |
21600212 |
gtttagaaacatttgaaat |
21600230 |
T |
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