View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19281_low_13 (Length: 337)
Name: NF19281_low_13
Description: NF19281
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19281_low_13 |
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Alignment Details
Target: chr7 (Bit Score: 303; Significance: 1e-170; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 303; E-Value: 1e-170
Query Start/End: Original strand, 14 - 320
Target Start/End: Complemental strand, 46961979 - 46961673
Alignment:
| Q |
14 |
agagctaggaggctgaaaataatccctggaagtaaacattattgcattcaaaacattgtttgtgtgatgactaatagtttcaccagactgatgaaataat |
113 |
Q |
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| T |
46961979 |
agagctaggaggctgaaaataatccctggaagtaaacattattgcattcaaaacattgtttgtgtgatgactaatagtttcaccagactgatgaaataat |
46961880 |
T |
|
| Q |
114 |
tcttgaacagtccttatccttagattatgtccaataacgaacataaacattgctaattgcttctaaattttgattcgattttttccacgcaataaacctt |
213 |
Q |
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| T |
46961879 |
tcttgaacagtccttatccttagattatgtccaataacgaacataaacattgctaattgcttctaaattttgattcgattttttccacacaataaacctt |
46961780 |
T |
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| Q |
214 |
ggtggtttccaaaataccacataacttgtatcatatatgtttatccatttggaaatcatctaaccaatgttgatttggatcattacgcacttaatcaaca |
313 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
46961779 |
ggtggtttccaaaataccacataacttgtatcatatatgtttatccatttggaaatcatctaaccaatgttgatttggatcattacgcacttaatcaaca |
46961680 |
T |
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| Q |
314 |
aattttg |
320 |
Q |
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| T |
46961679 |
aattttg |
46961673 |
T |
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