View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19281_low_16 (Length: 275)

Name: NF19281_low_16
Description: NF19281
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19281_low_16
NF19281_low_16
[»] chr2 (53 HSPs)
chr2 (11-275)||(18702707-18702971)
chr2 (12-275)||(18430808-18431071)
chr2 (41-264)||(26618998-26619221)
chr2 (27-264)||(19115063-19115300)
chr2 (30-264)||(22272112-22272347)
chr2 (39-257)||(44881154-44881372)
chr2 (39-243)||(23595464-23595666)
chr2 (30-243)||(41121605-41121818)
chr2 (62-243)||(30666990-30667172)
chr2 (27-243)||(22454872-22455089)
chr2 (130-243)||(39037628-39037741)
chr2 (24-243)||(24377102-24377322)
chr2 (70-238)||(25189404-25189572)
chr2 (70-243)||(13963903-13964077)
chr2 (70-243)||(23235008-23235182)
chr2 (71-238)||(25829140-25829308)
chr2 (25-243)||(21537128-21537347)
chr2 (149-243)||(18376911-18377005)
chr2 (27-243)||(19540417-19540634)
chr2 (149-243)||(20568755-20568849)
chr2 (62-243)||(30621217-30621399)
chr2 (62-243)||(30623838-30624020)
chr2 (27-228)||(24844149-24844352)
chr2 (70-244)||(6574047-6574224)
chr2 (149-243)||(10009755-10009849)
chr2 (109-243)||(25037224-25037358)
chr2 (109-243)||(25041331-25041465)
chr2 (136-262)||(10896425-10896552)
chr2 (154-243)||(22188112-22188201)
chr2 (152-244)||(28711706-28711798)
chr2 (149-243)||(9015375-9015467)
chr2 (204-246)||(1587093-1587135)
chr2 (158-244)||(33074226-33074312)
chr2 (39-243)||(23184207-23184403)
chr2 (195-244)||(31800938-31800987)
chr2 (191-264)||(20568113-20568187)
chr2 (204-244)||(28550978-28551018)
chr2 (204-244)||(31968103-31968143)
chr2 (204-244)||(44840434-44840474)
chr2 (204-246)||(22802458-22802500)
chr2 (70-226)||(20151960-20152117)
chr2 (204-244)||(22776348-22776388)
chr2 (204-244)||(22781726-22781766)
chr2 (149-237)||(40782484-40782572)
chr2 (204-242)||(3277032-3277070)
chr2 (195-237)||(24576042-24576084)
chr2 (204-246)||(30557381-30557423)
chr2 (208-246)||(31328030-31328068)
chr2 (208-246)||(31334751-31334789)
chr2 (195-244)||(38781399-38781448)
chr2 (204-240)||(14581519-14581555)
chr2 (204-244)||(35744060-35744100)
chr2 (204-244)||(40332087-40332127)
[»] chr3 (60 HSPs)
chr3 (12-262)||(26417601-26417851)
chr3 (11-264)||(12968291-12968544)
chr3 (66-264)||(23538142-23538340)
chr3 (30-246)||(20725090-20725306)
chr3 (31-246)||(19249353-19249568)
chr3 (41-275)||(12397042-12397278)
chr3 (31-244)||(12388813-12389026)
chr3 (48-244)||(16032530-16032726)
chr3 (70-243)||(41495005-41495179)
chr3 (123-264)||(6253403-6253545)
chr3 (27-244)||(6090737-6090955)
chr3 (114-244)||(12726254-12726384)
chr3 (70-243)||(49642741-49642915)
chr3 (115-236)||(37467346-37467467)
chr3 (74-237)||(14392987-14393151)
chr3 (109-243)||(15903204-15903339)
chr3 (149-243)||(31303392-31303486)
chr3 (73-244)||(47207711-47207884)
chr3 (27-238)||(13948347-13948559)
chr3 (115-238)||(22804048-22804171)
chr3 (149-244)||(38177702-38177797)
chr3 (149-243)||(13780643-13780737)
chr3 (62-237)||(16658589-16658765)
chr3 (115-243)||(20646160-20646288)
chr3 (70-244)||(2561193-2561368)
chr3 (149-244)||(14955432-14955527)
chr3 (149-244)||(49553548-49553643)
chr3 (204-246)||(11223566-11223608)
chr3 (195-244)||(25398360-25398409)
chr3 (195-244)||(40799879-40799928)
chr3 (109-242)||(46349863-46349996)
chr3 (204-252)||(5213574-5213622)
chr3 (149-237)||(17238981-17239069)
chr3 (140-256)||(17697600-17697715)
chr3 (204-244)||(21605768-21605808)
chr3 (155-238)||(12963150-12963233)
chr3 (70-244)||(28582111-28582286)
chr3 (70-244)||(47405400-47405575)
chr3 (195-241)||(18121727-18121773)
chr3 (195-241)||(18142857-18142903)
chr3 (130-244)||(29855414-29855528)
chr3 (149-243)||(29951497-29951591)
chr3 (149-243)||(30000651-30000745)
chr3 (27-244)||(52920411-52920628)
chr3 (203-244)||(11868274-11868315)
chr3 (204-244)||(1728129-1728169)
chr3 (204-244)||(46796481-46796521)
chr3 (204-240)||(49666519-49666555)
chr3 (204-244)||(53056841-53056881)
chr3 (204-243)||(37412611-37412650)
chr3 (204-246)||(2785067-2785109)
chr3 (214-264)||(10851790-10851842)
chr3 (211-244)||(13557776-13557809)
chr3 (200-233)||(19889055-19889088)
chr3 (207-244)||(21640872-21640909)
chr3 (204-244)||(9700150-9700190)
chr3 (204-244)||(20627545-20627585)
chr3 (204-244)||(21636784-21636824)
chr3 (204-244)||(24775648-24775688)
chr3 (204-244)||(30054331-30054371)
[»] scaffold0273 (1 HSPs)
scaffold0273 (8-275)||(5602-5868)
[»] scaffold0040 (1 HSPs)
scaffold0040 (27-264)||(1409-1646)
[»] chr1 (52 HSPs)
chr1 (41-275)||(18896468-18896703)
chr1 (70-243)||(12613716-12613888)
chr1 (70-243)||(21191766-21191939)
chr1 (30-246)||(17024825-17025041)
chr1 (98-264)||(17018563-17018728)
chr1 (69-275)||(18614874-18615068)
chr1 (70-243)||(33256251-33256425)
chr1 (70-243)||(33276423-33276597)
chr1 (27-244)||(22153862-22154080)
chr1 (70-243)||(28492304-28492478)
chr1 (71-243)||(1577873-1578046)
chr1 (149-244)||(22600162-22600257)
chr1 (70-243)||(20954373-20954547)
chr1 (109-243)||(21028799-21028933)
chr1 (149-243)||(22201716-22201810)
chr1 (70-233)||(19717540-19717704)
chr1 (149-244)||(32785917-32786012)
chr1 (109-244)||(39200932-39201067)
chr1 (28-238)||(48704215-48704426)
chr1 (27-235)||(12284437-12284646)
chr1 (130-242)||(2834697-2834809)
chr1 (149-244)||(25448546-25448641)
chr1 (70-244)||(29215802-29215977)
chr1 (70-244)||(38282572-38282746)
chr1 (158-275)||(20909380-20909496)
chr1 (203-244)||(30572202-30572243)
chr1 (195-244)||(36134195-36134244)
chr1 (204-244)||(21702819-21702859)
chr1 (112-244)||(35401814-35401946)
chr1 (204-244)||(44821580-44821620)
chr1 (204-244)||(46088994-46089034)
chr1 (204-244)||(48570266-48570306)
chr1 (70-244)||(1900350-1900525)
chr1 (70-244)||(2267094-2267269)
chr1 (195-238)||(16235322-16235365)
chr1 (149-244)||(22427337-22427432)
chr1 (142-237)||(26702102-26702197)
chr1 (149-243)||(10757427-10757521)
chr1 (195-244)||(2268536-2268585)
chr1 (203-244)||(19215617-19215658)
chr1 (200-237)||(30893104-30893141)
chr1 (204-244)||(10250991-10251031)
chr1 (204-244)||(14263486-14263526)
chr1 (204-244)||(23024793-23024833)
chr1 (204-244)||(35040171-35040211)
chr1 (109-244)||(22464749-22464884)
chr1 (200-242)||(7309826-7309868)
chr1 (206-244)||(17371047-17371085)
chr1 (204-246)||(21204958-21205000)
chr1 (195-244)||(23036553-23036602)
chr1 (204-240)||(2327475-2327511)
chr1 (204-244)||(21135195-21135235)
[»] chr4 (50 HSPs)
chr4 (23-256)||(41114660-41114893)
chr4 (30-275)||(17787950-17788187)
chr4 (44-248)||(11915696-11915900)
chr4 (22-264)||(17540375-17540615)
chr4 (94-275)||(11901157-11901337)
chr4 (30-243)||(6641685-6641898)
chr4 (39-243)||(40846100-40846305)
chr4 (98-264)||(10661132-10661298)
chr4 (98-264)||(10875277-10875443)
chr4 (27-243)||(55380291-55380508)
chr4 (24-245)||(45833393-45833615)
chr4 (200-264)||(8685510-8685574)
chr4 (152-264)||(10249792-10249903)
chr4 (148-244)||(14604922-14605018)
chr4 (149-243)||(12601102-12601196)
chr4 (27-244)||(37435428-37435646)
chr4 (149-243)||(37985628-37985722)
chr4 (27-112)||(22089721-22089805)
chr4 (149-244)||(19884702-19884797)
chr4 (70-244)||(22675456-22675631)
chr4 (149-243)||(9140913-9141007)
chr4 (109-238)||(29680520-29680649)
chr4 (149-243)||(3395591-3395685)
chr4 (109-243)||(19666373-19666507)
chr4 (31-235)||(19620958-19621163)
chr4 (204-244)||(3105490-3105530)
chr4 (204-244)||(6517485-6517525)
chr4 (70-233)||(16632451-16632615)
chr4 (27-238)||(56034580-56034792)
chr4 (149-244)||(29121370-29121465)
chr4 (130-244)||(17247244-17247358)
chr4 (25-243)||(23750523-23750740)
chr4 (195-244)||(10072935-10072984)
chr4 (202-243)||(12811244-12811285)
chr4 (204-244)||(17398745-17398785)
chr4 (204-244)||(20977457-20977497)
chr4 (204-244)||(54679930-54679970)
chr4 (109-244)||(13576090-13576225)
chr4 (204-242)||(1672391-1672429)
chr4 (204-242)||(1674866-1674904)
chr4 (204-246)||(8105635-8105677)
chr4 (149-243)||(14904372-14904466)
chr4 (204-246)||(25651175-25651217)
chr4 (204-246)||(56533133-56533175)
chr4 (204-244)||(10692851-10692891)
chr4 (204-244)||(10906617-10906657)
chr4 (204-244)||(14154065-14154105)
chr4 (204-244)||(16940016-16940056)
chr4 (204-244)||(22190846-22190886)
chr4 (204-244)||(27188709-27188749)
[»] scaffold0078 (1 HSPs)
scaffold0078 (41-275)||(31686-31920)
[»] chr8 (49 HSPs)
chr8 (12-264)||(26833014-26833267)
chr8 (41-256)||(22461588-22461803)
chr8 (31-248)||(18722585-18722803)
chr8 (31-248)||(18730930-18731148)
chr8 (70-243)||(43644895-43645068)
chr8 (39-243)||(19707505-19707709)
chr8 (31-248)||(18685336-18685554)
chr8 (62-243)||(19156195-19156377)
chr8 (152-275)||(18772587-18772709)
chr8 (70-243)||(24646337-24646511)
chr8 (27-226)||(33082873-33083073)
chr8 (41-246)||(19956289-19956496)
chr8 (70-244)||(23185204-23185379)
chr8 (149-243)||(12757821-12757915)
chr8 (70-243)||(39693534-39693708)
chr8 (70-238)||(16188988-16189157)
chr8 (71-243)||(16681282-16681455)
chr8 (149-238)||(17914463-17914552)
chr8 (24-243)||(602652-602872)
chr8 (149-244)||(16207304-16207399)
chr8 (27-243)||(18321094-18321311)
chr8 (29-243)||(17701744-17701959)
chr8 (109-244)||(17797420-17797555)
chr8 (149-238)||(17441866-17441954)
chr8 (154-243)||(18719000-18719089)
chr8 (149-244)||(17267472-17267567)
chr8 (149-243)||(17525787-17525881)
chr8 (158-244)||(40845454-40845540)
chr8 (154-243)||(18679814-18679903)
chr8 (149-244)||(15336146-15336241)
chr8 (149-244)||(15425211-15425306)
chr8 (149-244)||(15516515-15516610)
chr8 (202-245)||(19943232-19943275)
chr8 (204-246)||(9320564-9320606)
chr8 (200-238)||(25164074-25164112)
chr8 (149-243)||(29693314-29693408)
chr8 (207-244)||(6407724-6407761)
chr8 (204-244)||(14989564-14989604)
chr8 (204-244)||(18151759-18151799)
chr8 (204-244)||(22673776-22673816)
chr8 (208-244)||(43639781-43639817)
chr8 (204-244)||(45538552-45538592)
chr8 (200-235)||(20382503-20382538)
chr8 (203-244)||(30421541-30421582)
chr8 (204-244)||(13430741-13430781)
chr8 (202-238)||(21932887-21932923)
chr8 (204-244)||(22663114-22663154)
chr8 (204-244)||(24551272-24551312)
chr8 (206-246)||(28903455-28903495)
[»] chr6 (46 HSPs)
chr6 (48-246)||(10640365-10640564)
chr6 (42-242)||(19470678-19470878)
chr6 (27-264)||(25930459-25930700)
chr6 (41-264)||(17927774-17928000)
chr6 (152-264)||(19625794-19625905)
chr6 (139-264)||(23297932-23298056)
chr6 (85-244)||(26943582-26943741)
chr6 (98-264)||(12348079-12348246)
chr6 (70-243)||(32544272-32544446)
chr6 (136-264)||(7811996-7812123)
chr6 (71-243)||(15987240-15987414)
chr6 (149-243)||(18378321-18378415)
chr6 (109-243)||(20112708-20112842)
chr6 (152-275)||(25592592-25592710)
chr6 (149-246)||(14100488-14100585)
chr6 (70-244)||(9717849-9718024)
chr6 (156-243)||(13602179-13602266)
chr6 (149-243)||(24116835-24116929)
chr6 (154-244)||(29918023-29918113)
chr6 (70-238)||(15302212-15302381)
chr6 (39-243)||(23284571-23284776)
chr6 (155-243)||(19086165-19086253)
chr6 (27-241)||(15531549-15531764)
chr6 (149-243)||(19623986-19624080)
chr6 (71-244)||(21625107-21625280)
chr6 (154-243)||(12715473-12715562)
chr6 (204-244)||(12423267-12423307)
chr6 (204-244)||(22076510-22076550)
chr6 (149-240)||(21235135-21235226)
chr6 (149-244)||(22802147-22802242)
chr6 (114-244)||(15954709-15954839)
chr6 (130-244)||(20487947-20488061)
chr6 (154-244)||(21618250-21618340)
chr6 (203-244)||(16336133-16336174)
chr6 (204-244)||(12348999-12349039)
chr6 (195-239)||(13435543-13435587)
chr6 (195-243)||(16265244-16265292)
chr6 (204-244)||(16877219-16877259)
chr6 (204-244)||(19482758-19482798)
chr6 (204-248)||(19833136-19833180)
chr6 (204-244)||(33352029-33352069)
chr6 (149-244)||(20730752-20730847)
chr6 (107-175)||(16462658-16462727)
chr6 (204-244)||(17316628-17316668)
chr6 (204-244)||(19066121-19066161)
chr6 (195-243)||(25594075-25594123)
[»] scaffold0004 (4 HSPs)
scaffold0004 (23-243)||(244169-244388)
scaffold0004 (27-243)||(220245-220461)
scaffold0004 (149-243)||(377569-377663)
scaffold0004 (204-244)||(211404-211444)
[»] chr7 (58 HSPs)
chr7 (31-246)||(13893941-13894156)
chr7 (27-243)||(39284503-39284719)
chr7 (63-215)||(13880620-13880772)
chr7 (27-243)||(19236982-19237198)
chr7 (70-243)||(16316538-16316712)
chr7 (149-238)||(13880112-13880201)
chr7 (130-226)||(9098288-9098384)
chr7 (39-244)||(44467066-44467273)
chr7 (70-243)||(13302813-13302987)
chr7 (27-243)||(10883111-10883328)
chr7 (27-243)||(21695404-21695621)
chr7 (149-243)||(2913669-2913763)
chr7 (77-243)||(13018494-13018660)
chr7 (70-243)||(13730656-13730830)
chr7 (159-264)||(16411974-16412078)
chr7 (136-244)||(23280006-23280114)
chr7 (74-237)||(29935344-29935507)
chr7 (70-243)||(15088523-15088697)
chr7 (150-244)||(16111946-16112040)
chr7 (27-244)||(21283311-21283529)
chr7 (154-243)||(13137961-13138050)
chr7 (72-244)||(28409041-28409214)
chr7 (70-229)||(13032053-13032213)
chr7 (149-244)||(30944384-30944479)
chr7 (109-244)||(33691733-33691868)
chr7 (149-244)||(48236963-48237058)
chr7 (110-244)||(4821476-4821609)
chr7 (149-243)||(5000883-5000977)
chr7 (24-233)||(11792920-11793130)
chr7 (149-243)||(16309968-16310062)
chr7 (149-243)||(21692290-21692384)
chr7 (109-238)||(13648737-13648866)
chr7 (193-261)||(7488011-7488078)
chr7 (70-243)||(2500041-2500215)
chr7 (27-244)||(22577959-22578177)
chr7 (27-244)||(24788143-24788361)
chr7 (204-244)||(1293032-1293072)
chr7 (204-244)||(14425449-14425489)
chr7 (205-244)||(8182932-8182971)
chr7 (31-90)||(9098201-9098260)
chr7 (70-240)||(15467922-15468093)
chr7 (156-243)||(30025908-30025995)
chr7 (149-244)||(30945417-30945512)
chr7 (195-244)||(9069564-9069613)
chr7 (200-236)||(13260727-13260763)
chr7 (204-244)||(19711129-19711169)
chr7 (204-244)||(27871720-27871760)
chr7 (109-244)||(9709823-9709958)
chr7 (200-243)||(11319408-11319451)
chr7 (149-244)||(14426549-14426644)
chr7 (149-244)||(33605687-33605782)
chr7 (204-246)||(2265635-2265677)
chr7 (195-244)||(4494579-4494628)
chr7 (195-244)||(14193116-14193165)
chr7 (211-244)||(14745750-14745783)
chr7 (204-240)||(19339366-19339402)
chr7 (204-244)||(24794831-24794871)
chr7 (204-244)||(35952804-35952844)
[»] scaffold0056 (3 HSPs)
scaffold0056 (39-264)||(36084-36308)
scaffold0056 (204-244)||(25730-25770)
scaffold0056 (204-244)||(34869-34909)
[»] scaffold0081 (1 HSPs)
scaffold0081 (41-243)||(40644-40846)
[»] chr5 (42 HSPs)
chr5 (106-264)||(16607494-16607651)
chr5 (31-246)||(25096745-25096963)
chr5 (31-246)||(25154715-25154933)
chr5 (30-243)||(21198925-21199137)
chr5 (48-239)||(642646-642837)
chr5 (77-237)||(23881076-23881236)
chr5 (136-243)||(9398761-9398868)
chr5 (31-244)||(20550897-20551111)
chr5 (77-243)||(6499242-6499408)
chr5 (70-243)||(17814971-17815145)
chr5 (149-243)||(21910559-21910653)
chr5 (109-243)||(41566434-41566568)
chr5 (130-243)||(12352816-12352929)
chr5 (70-243)||(21099665-21099838)
chr5 (27-243)||(23412891-23413108)
chr5 (27-243)||(21072158-21072374)
chr5 (70-244)||(7745653-7745828)
chr5 (70-243)||(89382-89556)
chr5 (149-246)||(30742980-30743077)
chr5 (70-243)||(6512391-6512562)
chr5 (204-244)||(9088971-9089011)
chr5 (154-246)||(15516969-15517061)
chr5 (204-244)||(28139609-28139649)
chr5 (154-237)||(19536346-19536429)
chr5 (168-243)||(26784357-26784432)
chr5 (204-243)||(29138501-29138540)
chr5 (149-244)||(33022666-33022761)
chr5 (204-246)||(42243680-42243722)
chr5 (184-248)||(2152988-2153051)
chr5 (204-244)||(3245536-3245576)
chr5 (204-244)||(10848775-10848815)
chr5 (154-246)||(26765498-26765590)
chr5 (204-244)||(28464434-28464474)
chr5 (204-244)||(30115932-30115972)
chr5 (204-244)||(33933269-33933309)
chr5 (205-244)||(4887024-4887063)
chr5 (149-244)||(13545552-13545647)
chr5 (204-246)||(26759149-26759191)
chr5 (204-244)||(14086634-14086674)
chr5 (204-244)||(23391698-23391738)
chr5 (204-244)||(25930251-25930291)
chr5 (204-244)||(35932101-35932141)
[»] scaffold0064 (1 HSPs)
scaffold0064 (31-246)||(43811-44026)
[»] scaffold0035 (3 HSPs)
scaffold0035 (77-264)||(29780-29969)
scaffold0035 (204-244)||(99270-99310)
scaffold0035 (70-243)||(19402-19576)
[»] scaffold0324 (1 HSPs)
scaffold0324 (24-243)||(9963-10183)
[»] scaffold0022 (5 HSPs)
scaffold0022 (31-243)||(159062-159274)
scaffold0022 (189-244)||(37408-37463)
scaffold0022 (189-244)||(135468-135523)
scaffold0022 (70-172)||(39503-39606)
scaffold0022 (70-172)||(137563-137666)
[»] scaffold0364 (1 HSPs)
scaffold0364 (42-239)||(6018-6215)
[»] scaffold0047 (1 HSPs)
scaffold0047 (30-243)||(9910-10123)
[»] scaffold0498 (1 HSPs)
scaffold0498 (152-275)||(326-448)
[»] scaffold1747 (1 HSPs)
scaffold1747 (157-256)||(1311-1410)
[»] scaffold1745 (1 HSPs)
scaffold1745 (157-256)||(1-100)
[»] scaffold0020 (1 HSPs)
scaffold0020 (158-264)||(144891-144996)
[»] scaffold0116 (1 HSPs)
scaffold0116 (70-244)||(20901-21076)
[»] scaffold0479 (1 HSPs)
scaffold0479 (114-244)||(9975-10105)
[»] scaffold0210 (1 HSPs)
scaffold0210 (27-244)||(1666-1884)
[»] scaffold0037 (1 HSPs)
scaffold0037 (98-248)||(78397-78548)
[»] scaffold0084 (2 HSPs)
scaffold0084 (109-243)||(32492-32626)
scaffold0084 (149-243)||(49339-49433)
[»] scaffold0026 (3 HSPs)
scaffold0026 (44-174)||(151775-151905)
scaffold0026 (27-243)||(60023-60240)
scaffold0026 (149-236)||(7940-8027)
[»] scaffold0411 (1 HSPs)
scaffold0411 (149-238)||(12221-12310)
[»] scaffold0009 (1 HSPs)
scaffold0009 (70-264)||(268766-268959)
[»] scaffold0290 (1 HSPs)
scaffold0290 (70-243)||(18551-18725)
[»] scaffold0337 (1 HSPs)
scaffold0337 (27-243)||(14655-14872)
[»] scaffold0003 (2 HSPs)
scaffold0003 (159-264)||(686-790)
scaffold0003 (110-244)||(90026-90160)
[»] scaffold0005 (1 HSPs)
scaffold0005 (148-244)||(212360-212456)
[»] scaffold0025 (2 HSPs)
scaffold0025 (136-243)||(74588-74695)
scaffold0025 (30-112)||(74706-74788)
[»] scaffold0161 (2 HSPs)
scaffold0161 (114-243)||(10083-10212)
scaffold0161 (195-243)||(14828-14876)
[»] scaffold0771 (1 HSPs)
scaffold0771 (27-238)||(487-699)
[»] scaffold0065 (1 HSPs)
scaffold0065 (70-237)||(1703-1871)
[»] scaffold0227 (1 HSPs)
scaffold0227 (70-244)||(22682-22857)
[»] scaffold0217 (3 HSPs)
scaffold0217 (109-244)||(19037-19172)
scaffold0217 (205-244)||(9566-9605)
scaffold0217 (204-244)||(22196-22236)
[»] scaffold0120 (2 HSPs)
scaffold0120 (109-244)||(36745-36880)
scaffold0120 (109-244)||(42125-42260)
[»] scaffold0359 (1 HSPs)
scaffold0359 (157-243)||(5708-5794)
[»] scaffold0171 (1 HSPs)
scaffold0171 (27-244)||(27316-27534)
[»] scaffold0012 (1 HSPs)
scaffold0012 (114-244)||(215472-215602)
[»] scaffold0426 (1 HSPs)
scaffold0426 (149-243)||(13578-13672)
[»] scaffold0083 (2 HSPs)
scaffold0083 (27-243)||(25862-26079)
scaffold0083 (149-217)||(44714-44782)
[»] scaffold1359 (2 HSPs)
scaffold1359 (204-244)||(1820-1860)
scaffold1359 (149-244)||(665-760)
[»] scaffold0622 (1 HSPs)
scaffold0622 (152-264)||(2643-2754)
[»] scaffold0414 (1 HSPs)
scaffold0414 (204-244)||(7221-7261)
[»] scaffold0280 (1 HSPs)
scaffold0280 (204-244)||(2795-2835)
[»] scaffold0247 (2 HSPs)
scaffold0247 (204-244)||(25464-25504)
scaffold0247 (211-244)||(15811-15844)
[»] scaffold0146 (1 HSPs)
scaffold0146 (149-237)||(15130-15218)
[»] scaffold0015 (1 HSPs)
scaffold0015 (204-244)||(60809-60849)
[»] scaffold0043 (1 HSPs)
scaffold0043 (149-244)||(78376-78471)
[»] scaffold0530 (1 HSPs)
scaffold0530 (177-234)||(2033-2090)
[»] scaffold0251 (1 HSPs)
scaffold0251 (195-243)||(7710-7758)
[»] scaffold0249 (1 HSPs)
scaffold0249 (204-244)||(17830-17870)
[»] scaffold0176 (1 HSPs)
scaffold0176 (204-244)||(9161-9201)
[»] scaffold0028 (1 HSPs)
scaffold0028 (149-244)||(5612-5707)
[»] scaffold0023 (1 HSPs)
scaffold0023 (109-244)||(103578-103713)
[»] scaffold0352 (1 HSPs)
scaffold0352 (204-246)||(886-928)
[»] scaffold0211 (1 HSPs)
scaffold0211 (205-243)||(15688-15726)
[»] scaffold0132 (1 HSPs)
scaffold0132 (206-252)||(38152-38198)
[»] scaffold0473 (1 HSPs)
scaffold0473 (204-244)||(2756-2796)
[»] scaffold0387 (1 HSPs)
scaffold0387 (204-244)||(7387-7427)
[»] scaffold0193 (1 HSPs)
scaffold0193 (156-243)||(15800-15888)
[»] scaffold0016 (1 HSPs)
scaffold0016 (204-244)||(730-770)


Alignment Details
Target: chr2 (Bit Score: 233; Significance: 1e-129; HSPs: 53)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 233; E-Value: 1e-129
Query Start/End: Original strand, 11 - 275
Target Start/End: Complemental strand, 18702971 - 18702707
Alignment:
Q  11 atcatcagaggttctaaagatcatcaggagctgaagatcatcagaaactgaaagaattgaagcttcaaaggttgttcaaatgttttaatcacgcctatca 110  Q
    |||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  18702971 atcatcagaggttctaaagatcatcaggagttgaagatcatcagaagctgaaagaattgaagcttcaaaggttgttcaaatgttttaatcacgtctatca 18702872  T
Q  111 ttacagaagactagaagcatgaagtaacggctaattcaaaagaatttgaaggcattagatgcttactctttggagaacgttggaaaaggacaattgtacg 210  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18702871 ttacagaagactagaagcatgaagtaacggctaattcaaaagaatttgaaggcattagatgcttactctttggagaacgttggaaaaggacaattgtacg 18702772  T
Q  211 aagtgtacaacaactatctccactactctgttttgtgtatgcaatagtacaagagaaacagttgt 275  Q
    |||| | |||||||||||||||||||||| ||||||||||||||||||||||||  |||||||||    
T  18702771 aagtatgcaacaactatctccactactctattttgtgtatgcaatagtacaagaacaacagttgt 18702707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 12 - 275
Target Start/End: Original strand, 18430808 - 18431071
Alignment:
Q  12 tcatcagaggttctaaagatcatcaggagctgaagatcatcagaaactgaaagaattgaagcttcaaaggttgttcaaatgttttaatcacgcctatcat 111  Q
    |||||||||||||| |||||||||| ||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  18430808 tcatcagaggttctgaagatcatcaagagctgaagatcatcagaagctgaaagaattaaagcttcaaaggttgttcaaatgttttaatcacgcctatcat 18430907  T
Q  112 tacagaagactagaagcatgaagtaacggctaattcaaaagaatttgaaggcattagatgcttactctttggagaacgttggaaaaggacaattgtacga 211  Q
    | ||||||||||||||||||||| |||||||||||||||||||||||||||||||  ||||||| |||||||| |||||||||||| |||||| ||||||    
T  18430908 tgcagaagactagaagcatgaagcaacggctaattcaaaagaatttgaaggcattgaatgcttattctttggaaaacgttggaaaacgacaatagtacga 18431007  T
Q  212 agtgtacaacaactatctccactactctgttttgtgtatgcaatagtacaagagaaacagttgt 275  Q
    |||||||||| || | ||||||||||||| ||||||| ||| |||||||||||  |||||||||    
T  18431008 agtgtacaaccacgacctccactactctgatttgtgtctgctatagtacaagaacaacagttgt 18431071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 156; E-Value: 6e-83
Query Start/End: Original strand, 41 - 264
Target Start/End: Original strand, 26618998 - 26619221
Alignment:
Q  41 ctgaagatcatcagaaactgaaagaattgaagcttcaaaggttgttcaaatgttttaatcacgcctatcattacagaagactagaagcatgaagtaacgg 140  Q
    |||||||||| ||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||| |||| |||||| |||      
T  26618998 ctgaagatcaacagaagctgaaagaattgaagcttcaaaggttgttcaaatgatttaatcacgcctatcattgcagaagactggaagaatgaagcaacaa 26619097  T
Q  141 ctaattcaaaagaatttgaaggcattagatgcttactctttggagaacgttggaaaaggacaattgtacgaagtgtacaacaactatctccactactctg 240  Q
    ||| ||||||||||||||||||||||  ||||||| |||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||    
T  26619098 ctatttcaaaagaatttgaaggcattgaatgcttattctttggagaacgttgaaaaaggacaattgtacgaagtgtacaaccactatctccactactctg 26619197  T
Q  241 ttttgtgtatgcaatagtacaaga 264  Q
    |||||||| |||||||| ||||||    
T  26619198 ttttgtgtctgcaataggacaaga 26619221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 27 - 264
Target Start/End: Complemental strand, 19115300 - 19115063
Alignment:
Q  27 aagatcatcaggagctgaagatcatcagaaactgaaagaattgaagcttcaaaggttgttcaaatgttttaatcacgcctatcattacagaagactagaa 126  Q
    |||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||   ||||||| ||||||  ||| ||||||||| |||    
T  19115300 aagatcatcaggtgctgaagatcatcagaagctgaaagaattgaagcttcaaaggttgttcaaagaatttaatctcgcctactattgcagaagactggaa 19115201  T
Q  127 gcatgaagtaacggctaattcaaaagaatttgaaggcattagatgcttactctttggagaacgttggaaaaggacaattgtacgaagtgtacaacaacta 226  Q
    | |||||| |||  |||||||| | | || ||||| || | ||||| || || |||||||  |||| |||||||||||||||||||||||||||| ||||    
T  19115200 gaatgaagcaacaactaattcagatggatgtgaagccagtggatgcctattcgttggagagtgttgaaaaaggacaattgtacgaagtgtacaaccacta 19115101  T
Q  227 tctccactactctgttttgtgtatgcaatagtacaaga 264  Q
    |||||||||||||| ||||||| |||||||| ||||||    
T  19115100 tctccactactctgatttgtgtctgcaataggacaaga 19115063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 30 - 264
Target Start/End: Complemental strand, 22272347 - 22272112
Alignment:
Q  30 atcatcaggagctgaagatcatcagaaactgaaagaattgaagcttcaaaggttgttcaaatgttttaatcacgcctatcattacagaagactagaagca 129  Q
    |||| ||| |||||||||||||||||| |||| ||||||| || ||||||||||||||||||| |||||||||| |||||||| ||||||||| |||| |    
T  22272347 atcaccagaagctgaagatcatcagaagctgagagaattggagtttcaaaggttgttcaaatgatttaatcacgtctatcattgcagaagactggaagaa 22272248  T
Q  130 tgaagtaacggctaattcaaaagaatttgaaggcattagatgc-ttactctttggagaacgttggaaaaggacaattgtacgaagtgtacaacaactatc 228  Q
    ||||| || | |||||||||| | ||||||||||||| ||||| ||  || |||||||  |||| ||||||| ||||||| |||||||||||| ||||||    
T  22272247 tgaagcaatgactaattcaaatggatttgaaggcattggatgcttttttcgttggagagagttgaaaaaggaaaattgtaagaagtgtacaaccactatc 22272148  T
Q  229 tccactactctgttttgtgtatgcaatagtacaaga 264  Q
    ||||||||| || ||||||| |||||||| ||||||    
T  22272147 tccactactgtgatttgtgtctgcaataggacaaga 22272112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 39 - 257
Target Start/End: Complemental strand, 44881372 - 44881154
Alignment:
Q  39 agctgaagatcatcagaaactgaaagaattgaagcttcaaaggttgttcaaatgttttaatcacgcctatcattacagaagactagaagcatgaagtaac 138  Q
    |||||||||||||||||| |||| | ||||||||||||||||| ||||||||||  ||||||||| |||||||| ||||||||| |||| |||||| | |    
T  44881372 agctgaagatcatcagaagctgagataattgaagcttcaaaggctgttcaaatgacttaatcacgtctatcattgcagaagactggaagaatgaagcagc 44881273  T
Q  139 ggctaattcaaaagaatttgaaggcattagatgcttactctttggagaacgttggaaaaggacaattgtacgaagtgtacaacaactatctccactactc 238  Q
     ||||||||||| |  |||||||||||| |||| ||  |  |||||||  |||| |||||||||||||||||||||||||||| ||||||||||||||||    
T  44881272 agctaattcaaatgggtttgaaggcattggatgtttttttgttggagagagttgaaaaaggacaattgtacgaagtgtacaaccactatctccactactc 44881173  T
Q  239 tgttttgtgtatgcaatag 257  Q
    ||  |||||||||||||||    
T  44881172 tgaattgtgtatgcaatag 44881154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 39 - 243
Target Start/End: Original strand, 23595464 - 23595666
Alignment:
Q  39 agctgaagatcatcagaaactgaaagaattgaagcttcaaaggttgttcaaatgttttaatcacgcctatcattacagaagactagaagcatgaagtaac 138  Q
    ||||||||||||||||||  |||||||||| ||||||||||||||||||||| | ||||||||| |||| |||| |||||||| |||||  ||||| |||    
T  23595464 agctgaagatcatcagaagatgaaagaattaaagcttcaaaggttgttcaaaggatttaatcacacctagcattgcagaagaccagaagagtgaagcaac 23595563  T
Q  139 ggctaattcaaaagaatttgaaggcattagatgcttactctttggagaacgttggaaaaggacaattgtacgaagtgtacaacaactatctccactactc 238  Q
    | |||||||||| ||||||||||||||| ||| |||  ||| || ||  |||||  |||| |||||||||||||||||| ||| |||| |||| ||||||    
T  23595564 gactaattcaaatgaatttgaaggcattggattcttgttctctgaag--cgttgacaaagtacaattgtacgaagtgtagaaccactacctcctctactc 23595661  T
Q  239 tgttt 243  Q
     ||||    
T  23595662 agttt 23595666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 30 - 243
Target Start/End: Original strand, 41121605 - 41121818
Alignment:
Q  30 atcatcaggagctgaagatcatcagaaactgaaagaattgaagcttcaaaggttgttcaaatgttttaatcacgcctatcattacagaagactagaagca 129  Q
    |||| ||| |||||||||||||||||| |||  |||||| |||||||||||| |||||||| | |||||||||||||| |||| ||||||| | || |      
T  41121605 atcaccagaagctgaagatcatcagaagctgtgagaattaaagcttcaaaggctgttcaaaggatttaatcacgcctagcattgcagaagattggatgag 41121704  T
Q  130 tgaagtaacggctaattcaaaagaatttgaaggcattagatgcttactctttggagaacgttggaaaaggacaattgtacgaagtgtacaacaactatct 229  Q
    ||||| || | |||||||||||| ||||||||||||| |||  || ||||||| ||| | |||  |||| |||||||| |||| |||||||| |||| ||    
T  41121705 tgaagcaaagactaattcaaaaggatttgaaggcattggattattgctctttgaagagcattgacaaagtacaattgtgcgaaatgtacaaccactacct 41121804  T
Q  230 ccactactctgttt 243  Q
    ||||||||||||||    
T  41121805 ccactactctgttt 41121818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 62 - 243
Target Start/End: Complemental strand, 30667172 - 30666990
Alignment:
Q  62 aagaattgaagcttcaaaggttgttcaaatgttttaatcacgcctat-cattacagaagactagaagcatgaagtaacggctaattcaaaagaatttgaa 160  Q
    ||||||| ||||||||||||||||||||  | ||||||| || |||  |||| ||||||||| |||| |||||| |||| ||| ||  |||| |||||||    
T  30667172 aagaattaaagcttcaaaggttgttcaatggatttaatctcgtctaagcattgcagaagactggaagaatgaagcaacgactattttgaaaggatttgaa 30667073  T
Q  161 ggcattagatgcttactctttggagaacgttggaaaaggacaattgtacgaagtgtacaacaactatctccactactctgttt 243  Q
    |||||| |||||||  |||||| ||| |||||  |||| |||||||||||||||||||||| |||||||||||||||| ||||    
T  30667072 ggcattggatgcttgatctttgaagagcgttgacaaagtacaattgtacgaagtgtacaaccactatctccactactcagttt 30666990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 27 - 243
Target Start/End: Original strand, 22454872 - 22455089
Alignment:
Q  27 aagatcatcaggagctgaagatcatcagaaactgaaagaattgaagcttcaaa-ggttgttcaaatgttttaatcacgcctatcattacagaagactaga 125  Q
    ||||||| ||| |||||||| || ||||||  ||| ||| || |||||||||| || |||||||  | |||||||||||| | |||| |||||||| |||    
T  22454872 aagatcaccagaagctgaagttcttcagaagatgagagacttaaagcttcaaaagggtgttcaatggatttaatcacgcccaacattgcagaagaccaga 22454971  T
Q  126 agcatgaagtaacggctaattcaaaagaatttgaaggcattagatgcttactctttggagaacgttggaaaaggacaattgtacgaagtgtacaacaact 225  Q
    ||  ||||| ||| | ||||||||| ||| ||||||||||| ||||||| || |||| | | |||||  |||| |||||||||||||||||||||| | |    
T  22454972 agagtgaagcaacagttaattcaaatgaagttgaaggcattggatgcttgctttttgaaaagcgttgacaaagtacaattgtacgaagtgtacaaccagt 22455071  T
Q  226 atctccactactctgttt 243  Q
    | ||||||||||| ||||    
T  22455072 acctccactactcagttt 22455089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 130 - 243
Target Start/End: Original strand, 39037628 - 39037741
Alignment:
Q  130 tgaagtaacggctaattcaaaagaatttgaaggcattagatgcttactctttggagaacgttggaaaaggacaattgtacgaagtgtacaacaactatct 229  Q
    ||||| ||||||||||||||| ||| ||||||||||||||||||| || |||| ||| |||||  |||| |||||||||||||||||||||| |||| ||    
T  39037628 tgaagcaacggctaattcaaatgaagttgaaggcattagatgcttgctttttgaagagcgttgacaaagtacaattgtacgaagtgtacaaccactacct 39037727  T
Q  230 ccactactctgttt 243  Q
    ||||||||| ||||    
T  39037728 ccactactcagttt 39037741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 24 - 243
Target Start/End: Complemental strand, 24377322 - 24377102
Alignment:
Q  24 ctaaagatcatcaggagctgaagatcatcagaaactgaaagaattgaagcttcaaa-ggttgttcaaatgttttaatcacgcctatcattacagaagact 122  Q
    |||||||||| ||| |||||||| ||||||  |  || |||| || |||||||||| ||||||||||  | |||||||||||||| |||| ||||||||     
T  24377322 ctaaagatcaccagaagctgaagttcatcaagagatgcaagacttaaagcttcaaaaggttgttcaatggatttaatcacgcctagcattgcagaagacc 24377223  T
Q  123 agaagcatgaagtaacggctaattcaaaagaatttgaaggcattagatgcttactctttggagaacgttggaaaaggacaattgtacgaagtgtacaaca 222  Q
    |||||  ||||| |||| ||| ||  ||||  |||||  ||||| |||||||  |||||| ||| |||||  | || ||||||||||||||||||||||     
T  24377222 agaagagtgaagcaacgactattttgaaaggttttgagagcattggatgcttgttctttgaagagcgttgacatagtacaattgtacgaagtgtacaacc 24377123  T
Q  223 actatctccactactctgttt 243  Q
    |||||||||||||||| ||||    
T  24377122 actatctccactactcagttt 24377102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 70 - 238
Target Start/End: Complemental strand, 25189572 - 25189404
Alignment:
Q  70 aagcttcaaaggttgttcaaatgttttaatcacgcctatcattacagaagactagaagcatgaagtaacggctaattcaaaagaatttgaaggcattaga 169  Q
    ||||||||||||||||||||  | ||||||||| |||| |||| |||||||| || ||  ||||| || | |||||||||| ||| ||||||||||| ||    
T  25189572 aagcttcaaaggttgttcaatggatttaatcacacctagcattgcagaagaccaggagagtgaagcaatgactaattcaaatgaagttgaaggcattgga 25189473  T
Q  170 tgcttactctttggagaacgttggaaaaggacaattgtacgaagtgtacaacaactatctccactactc 238  Q
    | ||| || |||| ||| |||||  |||| ||||||||||||| |||||||| |||| |||||||||||    
T  25189472 ttcttgctttttgaagagcgttgacaaagtacaattgtacgaaatgtacaaccactacctccactactc 25189404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 70 - 243
Target Start/End: Original strand, 13963903 - 13964077
Alignment:
Q  70 aagcttcaaaggttgttcaaatgttttaatcacgcctat-cattacagaagactagaagcatgaagtaacggctaattcaaaagaatttgaaggcattag 168  Q
    ||||||||||||||||||||  | ||||||| || |||  ||||  ||||||||  |||  ||||| |||| ||| ||  |||||||||||||||||| |    
T  13963903 aagcttcaaaggttgttcaatggatttaatctcgtctaagcattgtagaagactgaaagagtgaagcaacgactattttgaaagaatttgaaggcattgg 13964002  T
Q  169 atgcttactctttggagaacgttggaaaaggacaattgtacgaagtgtacaacaactatctccactactctgttt 243  Q
    ||||||  |||||| ||| |||||  |||| |||||||||||||||||||||| |||||||||||||||| ||||    
T  13964003 atgcttgttctttgaagagcgttgacaaagtacaattgtacgaagtgtacaaccactatctccactactcagttt 13964077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 70 - 243
Target Start/End: Complemental strand, 23235182 - 23235008
Alignment:
Q  70 aagcttcaaaggttgttcaaatgttttaatcacgcctat-cattacagaagactagaagcatgaagtaacggctaattcaaaagaatttgaaggcattag 168  Q
    |||||||||||| |||||||  | ||||||| || |||  |||| ||||||||| ||||  | ||| |||| ||| ||  |||||||||||||||||| |    
T  23235182 aagcttcaaaggctgttcaatggatttaatctcgtctaagcattgcagaagactggaagagtaaagcaacgactattttgaaagaatttgaaggcattgg 23235083  T
Q  169 atgcttactctttggagaacgttggaaaaggacaattgtacgaagtgtacaacaactatctccactactctgttt 243  Q
    ||||||| |||||| |||  ||||  |||| |||||||||||||||||||||| |||||||||||||||| ||||    
T  23235082 atgcttattctttgaagagtgttgacaaagtacaattgtacgaagtgtacaaccactatctccactactcagttt 23235008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 71 - 238
Target Start/End: Complemental strand, 25829308 - 25829140
Alignment:
Q  71 agcttcaaaggttgttcaaatgttttaatcacgcctat-cattacagaagactagaagcatgaagtaacggctaattcaaaagaatttgaaggcattaga 169  Q
    ||||||||||| |||||||  | ||||||| || |||  |||| ||||||||| ||||  ||||| |||| ||| ||  |||| ||||||||||||| ||    
T  25829308 agcttcaaaggatgttcaatggatttaatctcgtctaagcattgcagaagactggaagagtgaagcaacgactattttgaaaggatttgaaggcattgga 25829209  T
Q  170 tgcttactctttggagaacgttggaaaaggacaattgtacgaagtgtacaacaactatctccactactc 238  Q
    |||||  |||||| ||| |||||  |||| |||||||||||||||||||||| ||||||||||||||||    
T  25829208 tgcttgttctttgaagagcgttgacaaagtacaattgtacgaagtgtacaaccactatctccactactc 25829140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 25 - 243
Target Start/End: Original strand, 21537128 - 21537347
Alignment:
Q  25 taaagatcatcaggagctgaagatcatcagaaactgaaagaattgaagcttcaaaggttgttcaaatgttttaatcacgcctat-cattacagaagacta 123  Q
    |||||||||  || || ||||| ||||||| |  || |||| || ||||||||||||||||||||  | ||||||| ||  ||  |||| |||||||| |    
T  21537128 taaagatcactagaagatgaagttcatcaggagatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtttaaacattgcagaagacca 21537227  T
Q  124 gaagcatgaagtaacggctaattcaaaagaatttgaaggcattagatgcttactctttggagaacgttggaaaaggacaattgtacgaagtgtacaacaa 223  Q
    ||||  ||||| |||| ||| ||  ||||  |||| ||||||| ||||||| || |||| ||| |||||  |||| |||||||||||||||||||||| |    
T  21537228 gaagagtgaagcaacgactattttgaaaggttttggaggcattggatgcttgctttttgaagagcgttgacaaagtacaattgtacgaagtgtacaacca 21537327  T
Q  224 ctatctccactactctgttt 243  Q
    ||||||||||||||| ||||    
T  21537328 ctatctccactactcagttt 21537347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 149 - 243
Target Start/End: Original strand, 18376911 - 18377005
Alignment:
Q  149 aaagaatttgaaggcattagatgcttactctttggagaacgttggaaaaggacaattgtacgaagtgtacaacaactatctccactactctgttt 243  Q
    |||| ||||||||||||| |||||||  |||||| ||| |||||  |||| |||||||||||||||||||||| |||||||||||||||| ||||    
T  18376911 aaaggatttgaaggcattggatgcttgttctttgaagagcgttgacaaagtacaattgtacgaagtgtacaaccactatctccactactcagttt 18377005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 27 - 243
Target Start/End: Complemental strand, 19540634 - 19540417
Alignment:
Q  27 aagatcatcaggagctgaagatcatcagaaactgaaagaattgaagcttcaaaggttgttcaaatgttttaatcacgcctat-cattacagaagactaga 125  Q
    ||||||| ||| |||||||| ||||||  |  || |||| || |||||||||| |||||||||  | ||||||| |  |||  |||| |||||||||||     
T  19540634 aagatcaccagaagctgaagttcatcatgagatgcaagacttaaagcttcaaatgttgttcaatggatttaatctcatctaagcattgcagaagactagg 19540535  T
Q  126 agcatgaagtaacggctaattcaaaagaatttgaaggcattagatgcttactctttggagaacgttggaaaaggacaattgtacgaagtgtacaacaact 225  Q
    ||  ||||| |||||||| ||| ||||  |||||||| ||| |||||||  |||||  ||| |||||  | || |||||||||||||||||||||| |||    
T  19540534 agagtgaagcaacggctatttcgaaaggttttgaaggtattggatgcttgttctttaaagagcgttgacatagtacaattgtacgaagtgtacaaccact 19540435  T
Q  226 atctccactactctgttt 243  Q
    ||||||||||||| ||||    
T  19540434 atctccactactcagttt 19540417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 149 - 243
Target Start/End: Original strand, 20568755 - 20568849
Alignment:
Q  149 aaagaatttgaaggcattagatgcttactctttggagaacgttggaaaaggacaattgtacgaagtgtacaacaactatctccactactctgttt 243  Q
    |||| ||||||||||||| |||||||  |||||| ||| |||||  |||| |||||||||||||||||||||| |||||| ||||||||| ||||    
T  20568755 aaaggatttgaaggcattggatgcttgttctttgaagagcgttgacaaagtacaattgtacgaagtgtacaaccactatccccactactcagttt 20568849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 62 - 243
Target Start/End: Complemental strand, 30621399 - 30621217
Alignment:
Q  62 aagaattgaagcttcaaaggttgttcaaatgttttaatcacgcctat-cattacagaagactagaagcatgaagtaacggctaattcaaaagaatttgaa 160  Q
    ||||||| ||| ||||||||||||||||  | ||||||| ||  ||  |||| ||||||||| ||||  ||||| | || ||| ||  |||| |||||||    
T  30621399 aagaattaaaggttcaaaggttgttcaatggatttaatctcgtgtaagcattgcagaagactggaagagtgaagcagcgactattttgaaaggatttgaa 30621300  T
Q  161 ggcattagatgcttactctttggagaacgttggaaaaggacaattgtacgaagtgtacaacaactatctccactactctgttt 243  Q
    |||||| |||| ||  |||||| ||| |||||  |||| |||||||||||||||||| ||| |||||||||||||||| ||||    
T  30621299 ggcattggatgtttgatctttgaagagcgttgacaaagtacaattgtacgaagtgtaaaaccactatctccactactcagttt 30621217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 62 - 243
Target Start/End: Complemental strand, 30624020 - 30623838
Alignment:
Q  62 aagaattgaagcttcaaaggttgttcaaatgttttaatcacgcctat-cattacagaagactagaagcatgaagtaacggctaattcaaaagaatttgaa 160  Q
    ||||||| ||| ||||||||||||||||  | ||||||| ||  ||  |||| ||||||||| ||||  ||||| | || ||| ||  |||| |||||||    
T  30624020 aagaattaaaggttcaaaggttgttcaatggatttaatctcgtgtaagcattgcagaagactggaagagtgaagcagcgactattttgaaaggatttgaa 30623921  T
Q  161 ggcattagatgcttactctttggagaacgttggaaaaggacaattgtacgaagtgtacaacaactatctccactactctgttt 243  Q
    |||||| |||| ||  |||||| ||| |||||  |||| |||||||||||||||||| ||| |||||||||||||||| ||||    
T  30623920 ggcattggatgtttgatctttgaagagcgttgacaaagtacaattgtacgaagtgtaaaaccactatctccactactcagttt 30623838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 27 - 228
Target Start/End: Complemental strand, 24844352 - 24844149
Alignment:
Q  27 aagatcatcaggagctgaagatcatcagaaactgaaagaattgaagcttcaaaggttgttcaaatgttttaa--tcacgcctatcattacagaa-gacta 123  Q
    |||||| |||| || ||||||||||||||| |||||||| | |||||||||| | ||||  | || | ||||  ||| |||||||||| ||||| || ||    
T  24844352 aagatcgtcagaagttgaagatcatcagaagctgaaagactggaagcttcaatgtttgtaaagatatgttaaaatcatgcctatcattgcagaaagaata 24844253  T
Q  124 gaagcatgaagtaacggctaattcaaaagaatttgaaggcattagatgcttactctttggagaacgttggaaaaggacaattgtacgaagtgtacaacaa 223  Q
    ||||| || || |||| ||| |||| | || || ||||||||| ||||| || |||||||||| | ||||||||||||||| |||| || |||||||| |    
T  24844252 gaagcctggagcaacgactatttcagaggagttggaaggcattggatgcctattctttggagagccttggaaaaggacaatagtac-aattgtacaacca 24844154  T
Q  224 ctatc 228  Q
    |||||    
T  24844153 ctatc 24844149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 70 - 244
Target Start/End: Original strand, 6574047 - 6574224
Alignment:
Q  70 aagcttcaaaggttgttcaaatgttttaatcacgccta--tcattacagaagactagaagcatgaagtaacggctaattcaaaagaatttgaaggcatta 167  Q
    |||||||||||||||||||| || ||||||| || |||   |||| ||||||||| |||   ||||| |||| ||| ||  |||| |||||||||||||     
T  6574047 aagcttcaaaggttgttcaattgatttaatctcgtctaatgcattgcagaagactggaaaagtgaagcaacgactagtttgaaaggatttgaaggcattg 6574146  T
Q  168 gatgcttactctttggagaacgttggaaaaggac-aattgtacgaagtgtacaacaactatctccactactctgtttt 244  Q
    |||| ||  ||||   ||| |||||  |||| || |||||||||||||||||||| |||| |||||||||||||||||    
T  6574147 gatgtttgttcttcaaagagcgttgacaaagtacaaattgtacgaagtgtacaaccactacctccactactctgtttt 6574224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 149 - 243
Target Start/End: Original strand, 10009755 - 10009849
Alignment:
Q  149 aaagaatttgaaggcattagatgcttactctttggagaacgttggaaaaggacaattgtacgaagtgtacaacaactatctccactactctgttt 243  Q
    |||| ||||||| ||||| |||||||  |||||| |||||||||  | || ||||||||||||| |||||||| |||||||||||||||| ||||    
T  10009755 aaaggatttgaaagcattggatgcttgttctttgaagaacgttgacatagtacaattgtacgaaatgtacaaccactatctccactactcagttt 10009849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 109 - 243
Target Start/End: Original strand, 25037224 - 25037358
Alignment:
Q  109 cattacagaagactagaagcatgaagtaacggctaattcaaaagaatttgaaggcattagatgcttactctttggagaacgttggaaaaggacaattgta 208  Q
    |||| ||||||||| ||||  ||| |||||| ||||||  |||| ||||||| ||||| |||| ||  |||||| | | |||||  |||| ||||||||     
T  25037224 cattgcagaagactggaagagtgatgtaacgactaatttgaaaggatttgaaagcattggatgtttgttctttgaaaagcgttgacaaagtacaattgtt 25037323  T
Q  209 cgaagtgtacaacaactatctccactactctgttt 243  Q
    ||||||||||||| |||||||||||||||| ||||    
T  25037324 cgaagtgtacaaccactatctccactactcagttt 25037358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 109 - 243
Target Start/End: Original strand, 25041331 - 25041465
Alignment:
Q  109 cattacagaagactagaagcatgaagtaacggctaattcaaaagaatttgaaggcattagatgcttactctttggagaacgttggaaaaggacaattgta 208  Q
    |||| ||||||||| ||||  ||| |||||| ||||||  |||| ||||||| ||||| |||| ||  |||||| | | |||||  |||| ||||||||     
T  25041331 cattgcagaagactggaagagtgatgtaacgactaatttgaaaggatttgaaagcattggatgtttgttctttgaaaagcgttgacaaagtacaattgtt 25041430  T
Q  209 cgaagtgtacaacaactatctccactactctgttt 243  Q
    ||||||||||||| |||||||||||||||| ||||    
T  25041431 cgaagtgtacaaccactatctccactactcagttt 25041465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 136 - 262
Target Start/End: Original strand, 10896425 - 10896552
Alignment:
Q  136 aacggctaattcaaaagaatttgaaggcattagatgcttactctttggagaacgttggaaaaggacaattgtacgaagtgtacaacaactatctccacta 235  Q
    |||||||| |||| ||||||| ||||||||| |||||||| ||   | ||| |||| |||||||||||| |||| || |||||||| |||||||||||||    
T  10896425 aacggctatttcagaagaattagaaggcattggatgcttattcgccgaagagcgttagaaaaggacaatagtac-aattgtacaaccactatctccacta 10896523  T
Q  236 ctctgt--tttgtgtatgcaatagtacaa 262  Q
    ||  ||  ||||||| |||||||||||||    
T  10896524 cttcgttatttgtgtctgcaatagtacaa 10896552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 154 - 243
Target Start/End: Original strand, 22188112 - 22188201
Alignment:
Q  154 atttgaaggcattagatgcttactctttggagaacgttggaaaaggacaattgtacgaagtgtacaacaactatctccactactctgttt 243  Q
    ||||||||||||| |||||||  |||||| ||| ||||   |||| | |||||||||||||||||||| |||||||||||||||| ||||    
T  22188112 atttgaaggcattggatgcttgttctttgaagagcgttaacaaagtataattgtacgaagtgtacaaccactatctccactactcagttt 22188201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 152 - 244
Target Start/End: Original strand, 28711706 - 28711798
Alignment:
Q  152 gaatttgaaggcattagatgcttactctttggagaacgttggaaaaggacaattgtacgaagtgtacaacaactatctccactactctgtttt 244  Q
    ||||||||||||||| |||||||  ||||   ||| ||||| ||||| ||  |||||||||||||||||| |||| |||||||||||||||||    
T  28711706 gaatttgaaggcattggatgcttgttcttcaaagagcgttgaaaaagtacgtttgtacgaagtgtacaaccactacctccactactctgtttt 28711798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 149 - 243
Target Start/End: Original strand, 9015375 - 9015467
Alignment:
Q  149 aaagaatttgaaggcattagatgcttactctttggagaacgttggaaaaggacaattgtacgaagtgtacaacaactatctccactactctgttt 243  Q
    |||| ||||||| ||||| |||||||| |||||| ||| |||||  |||| |||||||||||  ||||||||| |||||||||||||||| ||||    
T  9015375 aaaggatttgaaagcattggatgcttattctttgaagagcgttgacaaagtacaattgtacg--gtgtacaaccactatctccactactcagttt 9015467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 204 - 246
Target Start/End: Original strand, 1587093 - 1587135
Alignment:
Q  204 ttgtacgaagtgtacaacaactatctccactactctgttttgt 246  Q
    |||||||||||||||||| ||||||||||||||||||||||||    
T  1587093 ttgtacgaagtgtacaaccactatctccactactctgttttgt 1587135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 158 - 244
Target Start/End: Complemental strand, 33074312 - 33074226
Alignment:
Q  158 gaaggcattagatgcttactctttggagaacgttggaaaaggacaattgtacgaagtgtacaacaactatctccactactctgtttt 244  Q
    |||||||||||||||||| ||||   | |||||||  | |  || ||||||||||||||||||| ||||||||||||||||||||||    
T  33074312 gaaggcattagatgcttattcttcaaaaaacgttgacataatacgattgtacgaagtgtacaaccactatctccactactctgtttt 33074226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 39 - 243
Target Start/End: Original strand, 23184207 - 23184403
Alignment:
Q  39 agctgaagatcatcagaaactgaaagaattgaagcttcaaaggttgttcaaatgttttaatcacgcctatcattacagaagactagaagcatgaagtaac 138  Q
    ||||||||||||||||||  |||| ||||| ||||||||||||||||||||| | || |||||| |||| |||  |||||||| |||||  ||||| | |    
T  23184207 agctgaagatcatcagaagatgaa-gaatt-aagcttcaaaggttgttcaaaggatt-aatcacacctagcatg-cagaagaccagaagagtgaagca-c 23184301  T
Q  139 ggctaattcaaaagaatttgaaggcattagatgcttactctttggagaacgttggaaaaggacaattgtacgaagtgtacaacaactatctccactactc 238  Q
    | |||||||||| ||||||||||||||| ||| | |  ||| || ||  |||||  |||| |||||||||||||||||| ||| |||| |||| ||||||    
T  23184302 gactaattcaaatgaatttgaaggcattggattc-tgttctctgaag--cgttgacaaagtacaattgtacgaagtgtagaaccactacctcctctactc 23184398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 195 - 244
Target Start/End: Original strand, 31800938 - 31800987
Alignment:
Q  195 aaaggacaattgtacgaagtgtacaacaactatctccactactctgtttt 244  Q
    |||| ||| |||||||||||||||||| ||||||||||||||||||||||    
T  31800938 aaagtacatttgtacgaagtgtacaaccactatctccactactctgtttt 31800987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 191 - 264
Target Start/End: Complemental strand, 20568187 - 20568113
Alignment:
Q  191 tggaaaaggacaattgtacgaagtgtacaacaactatctccactactctg--ttttgtgtatgcaatagtacaaga 264  Q
    |||||||||||||| |||| || |||||||| |||| |||||||||||||  |||||||| |||||||||||||||    
T  20568187 tggaaaaggacaatagtac-aattgtacaaccactacctccactactctgttttttgtgtctgcaatagtacaaga 20568113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 204 - 244
Target Start/End: Original strand, 28550978 - 28551018
Alignment:
Q  204 ttgtacgaagtgtacaacaactatctccactactctgtttt 244  Q
    |||||||||||||||||| ||||||||||||||||||||||    
T  28550978 ttgtacgaagtgtacaaccactatctccactactctgtttt 28551018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 204 - 244
Target Start/End: Original strand, 31968103 - 31968143
Alignment:
Q  204 ttgtacgaagtgtacaacaactatctccactactctgtttt 244  Q
    |||||||||||||||||| ||||||||||||||||||||||    
T  31968103 ttgtacgaagtgtacaaccactatctccactactctgtttt 31968143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 204 - 244
Target Start/End: Complemental strand, 44840474 - 44840434
Alignment:
Q  204 ttgtacgaagtgtacaacaactatctccactactctgtttt 244  Q
    |||||||||||||||||| ||||||||||||||||||||||    
T  44840474 ttgtacgaagtgtacaaccactatctccactactctgtttt 44840434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 204 - 246
Target Start/End: Complemental strand, 22802500 - 22802458
Alignment:
Q  204 ttgtacgaagtgtacaacaactatctccactactctgttttgt 246  Q
    |||||||||||||||||| |||| |||||||||||||||||||    
T  22802500 ttgtacgaagtgtacaaccactacctccactactctgttttgt 22802458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 70 - 226
Target Start/End: Original strand, 20151960 - 20152117
Alignment:
Q  70 aagcttcaaaggttgttcaaatgttttaatcacgcctat-cattacagaagactagaagcatgaagtaacggctaattcaaaagaatttgaaggcattag 168  Q
    |||||||||| |||||||||  | ||||||| || |||  |||| ||||||||| |||   ||||| ||||| || ||  |||| ||||||||||||| |    
T  20151960 aagcttcaaaagttgttcaatggatttaatctcgtctaagcattgcagaagactggaaaagtgaagcaacggttagtttgaaaggatttgaaggcattgg 20152059  T
Q  169 atgcttactctttggagaacgttggaaaaggacaattgtacgaagtgtacaacaacta 226  Q
    ||||||  ||||   ||| |||||  |||| |||||||||||||||||||||| ||||    
T  20152060 atgcttgttcttcaaagagcgttgacaaagtacaattgtacgaagtgtacaaccacta 20152117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 204 - 244
Target Start/End: Original strand, 22776348 - 22776388
Alignment:
Q  204 ttgtacgaagtgtacaacaactatctccactactctgtttt 244  Q
    |||||||||||||||||| |||||||||| |||||||||||    
T  22776348 ttgtacgaagtgtacaaccactatctccagtactctgtttt 22776388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 204 - 244
Target Start/End: Original strand, 22781726 - 22781766
Alignment:
Q  204 ttgtacgaagtgtacaacaactatctccactactctgtttt 244  Q
    |||||||||||||||||| |||||||||| |||||||||||    
T  22781726 ttgtacgaagtgtacaaccactatctccagtactctgtttt 22781766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 149 - 237
Target Start/End: Complemental strand, 40782572 - 40782484
Alignment:
Q  149 aaagaatttgaaggcattagatgcttactctttggagaacgttggaaaaggacaattgtacgaagtgtacaacaactatctccactact 237  Q
    |||| ||||||| ||||| |||| ||  |||||| ||| |||||  | || |||||||||||||||||||||| |||||||||| ||||    
T  40782572 aaaggatttgaaagcattggatgtttgttctttgaagagcgttgacatagtacaattgtacgaagtgtacaaccactatctccaatact 40782484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 204 - 242
Target Start/End: Complemental strand, 3277070 - 3277032
Alignment:
Q  204 ttgtacgaagtgtacaacaactatctccactactctgtt 242  Q
    |||||||||||||||||| ||||||||||||||| ||||    
T  3277070 ttgtacgaagtgtacaaccactatctccactactatgtt 3277032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 195 - 237
Target Start/End: Complemental strand, 24576084 - 24576042
Alignment:
Q  195 aaaggacaattgtacgaagtgtacaacaactatctccactact 237  Q
    |||| |||||||||||||||||||||| |||| ||||||||||    
T  24576084 aaagtacaattgtacgaagtgtacaaccactacctccactact 24576042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 204 - 246
Target Start/End: Original strand, 30557381 - 30557423
Alignment:
Q  204 ttgtacgaagtgtacaacaactatctccactactctgttttgt 246  Q
    |||||||||||||||||| |||| |||||||||||| ||||||    
T  30557381 ttgtacgaagtgtacaaccactacctccactactctattttgt 30557423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 208 - 246
Target Start/End: Original strand, 31328030 - 31328068
Alignment:
Q  208 acgaagtgtacaacaactatctccactactctgttttgt 246  Q
    |||||||||||||| |||| |||||||||||||||||||    
T  31328030 acgaagtgtacaaccactacctccactactctgttttgt 31328068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 208 - 246
Target Start/End: Original strand, 31334751 - 31334789
Alignment:
Q  208 acgaagtgtacaacaactatctccactactctgttttgt 246  Q
    |||||||||||||| |||| |||||||||||||||||||    
T  31334751 acgaagtgtacaaccactacctccactactctgttttgt 31334789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 195 - 244
Target Start/End: Complemental strand, 38781448 - 38781399
Alignment:
Q  195 aaaggacaattgtacgaagtgtacaacaactatctccactactctgtttt 244  Q
    |||| |||||||||||||||||||||| ||||  ||||||||||| ||||    
T  38781448 aaagtacaattgtacgaagtgtacaaccactacatccactactctatttt 38781399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 204 - 240
Target Start/End: Complemental strand, 14581555 - 14581519
Alignment:
Q  204 ttgtacgaagtgtacaacaactatctccactactctg 240  Q
    |||||||||||||||||| |||||||||||| |||||    
T  14581555 ttgtacgaagtgtacaaccactatctccacttctctg 14581519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 204 - 244
Target Start/End: Original strand, 35744060 - 35744100
Alignment:
Q  204 ttgtacgaagtgtacaacaactatctccactactctgtttt 244  Q
    ||||||||| |||||||| |||||||||||||||| |||||    
T  35744060 ttgtacgaaatgtacaactactatctccactactcagtttt 35744100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 204 - 244
Target Start/End: Complemental strand, 40332127 - 40332087
Alignment:
Q  204 ttgtacgaagtgtacaacaactatctccactactctgtttt 244  Q
    |||||||||||||||||| |||| ||||| |||||||||||    
T  40332127 ttgtacgaagtgtacaaccactaactccattactctgtttt 40332087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 187; Significance: 1e-101; HSPs: 60)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 12 - 262
Target Start/End: Original strand, 26417601 - 26417851
Alignment:
Q  12 tcatcagaggttctaaagatcatcaggagctgaagatcatcagaaactgaaagaattgaagcttcaaaggttgttcaaatgttttaatcacgcctatcat 111  Q
    |||||||||||||| |||||||||||||| ||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  26417601 tcatcagaggttctgaagatcatcaggagttgaagatcatcagaagctgaaagaattgaagcttcaaagtttgttcaaatgttttaatcacgcctatcat 26417700  T
Q  112 tacagaagactagaagcatgaagtaacggctaattcaaaagaatttgaaggcattagatgcttactctttggagaacgttggaaaaggacaattgtacga 211  Q
    | |||||||||||||| |||||| ||||||||||||||||||||||||||||||| |||||| | ||||||||||||||||||||| ||||||||||| |    
T  26417701 tccagaagactagaagaatgaagcaacggctaattcaaaagaatttgaaggcattggatgctcattctttggagaacgttggaaaatgacaattgtacaa 26417800  T
Q  212 agtgtacaacaactatctccactactctgttttgtgtatgcaatagtacaa 262  Q
    |||||||||| ||||||| |||||||||||||||||| |||||||| ||||    
T  26417801 agtgtacaaccactatcttcactactctgttttgtgtctgcaataggacaa 26417851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 11 - 264
Target Start/End: Complemental strand, 12968544 - 12968291
Alignment:
Q  11 atcatcagaggttctaaagatcatcaggagctgaagatcatcagaaactgaaagaattgaagcttcaaaggttgttcaaatgttttaatcacgcctatca 110  Q
    ||||||||||||||| |||||||||||||||||| || |||||||| |||||||| |||||||||||||||||||| |||||||||||||||  ||||||    
T  12968544 atcatcagaggttctgaagatcatcaggagctgaggaccatcagaagctgaaagatttgaagcttcaaaggttgtttaaatgttttaatcacatctatca 12968445  T
Q  111 ttacagaagactagaagcatgaagtaacggctaattcaaaagaatttgaaggcattagatgcttactctttggagaacgttggaaaaggacaattgtacg 210  Q
    || |||||||||||||||||||||||||| |||||||||||||||||||||||||| ||| |||| |||||| |||||||||||||||||||||| ||||    
T  12968444 ttgcagaagactagaagcatgaagtaacgactaattcaaaagaatttgaaggcattggatacttattctttgaagaacgttggaaaaggacaattatacg 12968345  T
Q  211 aagtgtacaacaactatctccactactctgttttgtgtatgcaatagtacaaga 264  Q
    ||||||||||| |||||||||||||||||||||||||| |||||||||||||||    
T  12968344 aagtgtacaaccactatctccactactctgttttgtgtctgcaatagtacaaga 12968291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 66 - 264
Target Start/End: Original strand, 23538142 - 23538340
Alignment:
Q  66 attgaagcttcaaaggttgttcaaatgttttaatcacgcctatcattacagaagactagaagcatgaagtaacggctaattcaaaagaatttgaaggcat 165  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||| |||| |||||  ||||| || |||||||||||||||||||||    
T  23538142 attgaagcttcaaagtttgttcaaatgttttaatcacgcctatcattgcagaagactggaagaatgaaacaacggttatttcaaaagaatttgaaggcat 23538241  T
Q  166 tagatgcttactctttggagaacgttggaaaaggacaattgtacgaagtgtacaacaactatctccactactctgttttgtgtatgcaatagtacaaga 264  Q
    |  ||||||| ||||| |||||||||| |||||||||||||||||||||||||||| ||||||||||||||  |||||| ||| | |||||| ||||||    
T  23538242 tgaatgcttattctttagagaacgttgaaaaaggacaattgtacgaagtgtacaaccactatctccactacattgttttatgtcttcaataggacaaga 23538340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 30 - 246
Target Start/End: Complemental strand, 20725306 - 20725090
Alignment:
Q  30 atcatcaggagctgaagatcatcagaaactgaaagaattgaagcttcaaaggttgttcaaatgttttaatcacgcctatcattacagaagactagaagca 129  Q
    |||| ||| ||||||||||||||| || |||| |||||| |||||||||||| |||||||| | | |||||||| ||| |||| |||||||| |||||      
T  20725306 atcaccagaagctgaagatcatcataagctgagagaattaaagcttcaaaggctgttcaaaagatctaatcacgtctagcattgcagaagaccagaagag 20725207  T
Q  130 tgaagtaacggctaattcaaaagaatttgaaggcattagatgcttactctttggagaacgttggaaaaggacaattgtacgaagtgtacaacaactatct 229  Q
    ||||| |||| |||||||||||| |||||||| |||| |||||||  |  ||| ||| ||||| ||||||||||||||||||||||||||| ||||||||    
T  20725206 tgaagcaacgactaattcaaaaggatttgaagacattggatgcttgtttcttgaagagcgttgaaaaaggacaattgtacgaagtgtacaataactatct 20725107  T
Q  230 ccactactctgttttgt 246  Q
    |||||||||||||||||    
T  20725106 ccactactctgttttgt 20725090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 31 - 246
Target Start/End: Original strand, 19249353 - 19249568
Alignment:
Q  31 tcatcaggagctgaagatcatcagaaactgaaagaattgaagcttcaaaggttgttcaaatgttttaatcacgcctatcattacagaagactagaagcat 130  Q
    ||||||||||||||||||||| ||||  ||| ||| || ||||||||||||||||||||| | |||||||||||||| |||| |||||||| |||||  |    
T  19249353 tcatcaggagctgaagatcattagaagatgagagacttaaagcttcaaaggttgttcaaacgatttaatcacgcctagcattgcagaagaccagaagagt 19249452  T
Q  131 gaagtaacggctaattcaaaagaatttgaaggcattagatgcttactctttggagaacgttggaaaaggacaattgtacgaagtgtacaacaactatctc 230  Q
    |||| ||| ||||||||||||| ||||||||||||| |||| ||  |||||| ||| || || || ||||||||||||||||||||||||| |||  |||    
T  19249453 gaagcaacagctaattcaaaaggatttgaaggcattggatgtttgttctttgaagagcgctgaaataggacaattgtacgaagtgtacaaccacttactc 19249552  T
Q  231 cactactctgttttgt 246  Q
    ||||||  ||||||||    
T  19249553 cactacattgttttgt 19249568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 41 - 275
Target Start/End: Complemental strand, 12397278 - 12397042
Alignment:
Q  41 ctgaagatcatcagaaactgaaagaattgaagcttcaaaggttgttcaaatgtt-tta--atcacgcctatcattacagaagactagaagcatgaagtaa 137  Q
    |||||||||||||||| |   |||| | ||||||||||| || ||| ||||||| |||  |||| || ||||||| ||||||| ||||||| | ||| ||    
T  12397278 ctgaagatcatcagaagccagaagactggaagcttcaaaagtggtt-aaatgttgttattatcaagcttatcattgcagaagaatagaagcctaaagcaa 12397180  T
Q  138 cggctaattcaaaagaat-ttgaaggcattagatgcttactctttggagaacgttggaaaaggacaattgtacgaagtgtacaacaactatctccactac 236  Q
    ||||||||||| | |||| ||||||| ||| |||||||| |||||||||||||||||||||||||||| |||| || |||||||| |||||||||||||     
T  12397179 cggctaattcagaggaatgttgaaggtatttgatgcttattctttggagaacgttggaaaaggacaatagtac-aattgtacaactactatctccactat 12397081  T
Q  237 tctgttttgtgtatgcaatagtacaagagaaacagttgt 275  Q
    |||||||||||| |||||||||||||||| |||||||||    
T  12397080 tctgttttgtgtctgcaatagtacaagagcaacagttgt 12397042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 31 - 244
Target Start/End: Original strand, 12388813 - 12389026
Alignment:
Q  31 tcatcaggagctgaagatcatcagaaactgaaagaattgaagcttcaaaggttgttcaaatgttttaatcacgcctatcattacagaagactagaagcat 130  Q
    |||||| |||||||||||||| ||||  ||| ||| || ||||||||||||||||||||| | |||||||| | |||  ||| |||||||  ||||   |    
T  12388813 tcatcaagagctgaagatcataagaagatgagagacttaaagcttcaaaggttgttcaaaggatttaatcatgtctagaattgcagaagatcagaacagt 12388912  T
Q  131 gaagtaacggctaattcaaaagaatttgaaggcattagatgcttactctttggagaacgttggaaaaggacaattgtacgaagtgtacaacaactatctc 230  Q
    ||||  ||| ||||||||||||||||| |||||||| |||||||  |||||| ||| |||||| ||||||||||||||||||||||||||| |||| |||    
T  12388913 gaagctacgactaattcaaaagaattttaaggcattggatgcttcttctttgaagagcgttggcaaaggacaattgtacgaagtgtacaaccactacctc 12389012  T
Q  231 cactactctgtttt 244  Q
    ||||||||||||||    
T  12389013 cactactctgtttt 12389026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 48 - 244
Target Start/End: Complemental strand, 16032726 - 16032530
Alignment:
Q  48 tcatcagaaactgaaagaattgaagcttcaaaggttgttcaaatgttttaatcacgcctatcattacagaagactagaagcatgaagtaacggctaattc 147  Q
    |||||||||  ||| ||| || ||||||||||||||||||||| | |||||||| |||||||| | |||||||| || ||  || |  |||| ||| ||     
T  16032726 tcatcagaagatgagagacttaaagcttcaaaggttgttcaaaggatttaatcatgcctatcactgcagaagaccaggagagtgtatcaacgactatttt 16032627  T
Q  148 aaaagaatttgaaggcattagatgcttactctttggagaacgttggaaaaggacaattgtacgaagtgtacaacaactatctccactactctgtttt 244  Q
     |||| ||||||||||||| |||||||  |||||| ||| | |||  |||| |||||||||||||||||||||| |||| |||||||||||||||||    
T  16032626 gaaaggatttgaaggcattggatgcttgttctttgaagagcattgacaaagtacaattgtacgaagtgtacaaccactacctccactactctgtttt 16032530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 70 - 243
Target Start/End: Complemental strand, 41495179 - 41495005
Alignment:
Q  70 aagcttcaaaggttgttcaaatgttttaatcacgcctat-cattacagaagactagaagcatgaagtaacggctaattcaaaagaatttgaaggcattag 168  Q
    |||||||||||| |||||||  | ||||||| || |||  |||| ||||||||| ||||  ||||| |||| ||| ||  |||| ||||||||||||| |    
T  41495179 aagcttcaaaggctgttcaatggatttaatctcgtctaaacattgcagaagactggaagagtgaagcaacgactattttgaaaggatttgaaggcattgg 41495080  T
Q  169 atgcttactctttggagaacgttggaaaaggacaattgtacgaagtgtacaacaactatctccactactctgttt 243  Q
    ||||||  |||||| ||| |||||  |||| |||||||||||||||||||||| |||||||||||||||| ||||    
T  41495079 atgcttgttctttgaagagcgttgacaaagtacaattgtacgaagtgtacaaccactatctccactactcagttt 41495005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 123 - 264
Target Start/End: Complemental strand, 6253545 - 6253403
Alignment:
Q  123 agaagcatgaagtaacggctaattcaaaagaatttgaa-ggcattagatgcttactctttggagaacgttggaaaaggacaattgtacgaagtgtacaac 221  Q
    |||||| || || ||||||||||||| | |||||| || |||||| |||||||| |||||| ||||||||||||||||||||| |||| || ||||| ||    
T  6253545 agaagcctggagcaacggctaattcagaggaattttaaaggcattggatgcttattctttgaagaacgttggaaaaggacaatagtac-aattgtactac 6253447  T
Q  222 aactatctccactactct-gttttgtgtatgcaatagtacaaga 264  Q
     |||| ||||| ||||||  |||||||| |||||||||||||||    
T  6253446 cactacctccattactctatttttgtgtctgcaatagtacaaga 6253403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 27 - 244
Target Start/End: Complemental strand, 6090955 - 6090737
Alignment:
Q  27 aagatcatcaggagctgaagatcatcagaaactgaaagaattgaagcttcaaaggttgttcaaatgttttaatcacgcctat-cattacagaagactaga 125  Q
    ||||||| ||| |||||||| ||||||| |  || |||| || || |||||||||||| ||||  | ||||||| || |||  |||| ||||||||||||    
T  6090955 aagatcaccagaagctgaagttcatcaggagatgcaagacttaaaacttcaaaggttgctcaatggatttaatctcgtctaagcattgcagaagactaga 6090856  T
Q  126 agcatgaagtaacggctaattcaaaagaatttgaaggcattagatgcttactctttggagaacgttggaaaaggacaattgtacgaagtgtacaacaact 225  Q
    ||  ||||| |||  ||||||  |||| |||||||||||||  ||||||  |||||  | | | |||  |||| |||||||||||||||||||||| |||    
T  6090855 agagtgaagcaacatctaatttgaaaggatttgaaggcattgaatgcttgttctttaaaaagctttgacaaagtacaattgtacgaagtgtacaaccact 6090756  T
Q  226 atctccactactctgtttt 244  Q
    | |||||||||||||||||    
T  6090755 acctccactactctgtttt 6090737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 114 - 244
Target Start/End: Original strand, 12726254 - 12726384
Alignment:
Q  114 cagaagactagaagcatgaagtaacggctaattcaaaagaatttgaaggcattagatgcttactctttggagaacgttggaaaaggacaattgtacgaag 213  Q
    ||||||||||||||  |||||||||| ||| ||  |||| ||||||| ||||| ||||||||||||||  |||  |||   |||| |||||||||| |||    
T  12726254 cagaagactagaagagtgaagtaacgactattttgaaaggatttgaaagcattggatgcttactctttaaagagagttaacaaagtacaattgtacaaag 12726353  T
Q  214 tgtacaacaactatctccactactctgtttt 244  Q
    |||||||| |||| |||||||||||||||||    
T  12726354 tgtacaaccactacctccactactctgtttt 12726384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 70 - 243
Target Start/End: Original strand, 49642741 - 49642915
Alignment:
Q  70 aagcttcaaaggttgttcaaatgttttaatcacgcctat-cattacagaagactagaagcatgaagtaacggctaattcaaaagaatttgaaggcattag 168  Q
    ||||||||||||||||||||  | ||||||| || |||  |||| ||||||||| ||||  ||||| |||| ||| ||  |||| ||||||||||||| |    
T  49642741 aagcttcaaaggttgttcaatagatttaatctcgtctaagcattgcagaagactggaagagtgaagcaacgactattttgaaaggatttgaaggcattgg 49642840  T
Q  169 atgcttactctttggagaacgttggaaaaggacaattgtacgaagtgtacaacaactatctccactactctgttt 243  Q
    ||| ||  |||||  ||| |||||  |||| |||||||||| ||||||||||| |||||||||||||||| ||||    
T  49642841 atgattgttcttttaagagcgttgacaaagtacaattgtacaaagtgtacaaccactatctccactactcagttt 49642915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 115 - 236
Target Start/End: Complemental strand, 37467467 - 37467346
Alignment:
Q  115 agaagactagaagcatgaagtaacggctaattcaaaagaatttgaaggcattagatgcttactctttggagaacgttggaaaaggacaattgtacgaagt 214  Q
    |||||||| ||||  ||||| |||| ||| ||  |||| ||||||||||||| |||||||  |||||| ||| |||||  |||| |||||||||||||||    
T  37467467 agaagactggaagagtgaagcaacgactattttgaaaggatttgaaggcattggatgcttgttctttgaagagcgttgacaaagtacaattgtacgaagt 37467368  T
Q  215 gtacaacaactatctccactac 236  Q
    ||||||| ||||||||||||||    
T  37467367 gtacaaccactatctccactac 37467346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 74 - 237
Target Start/End: Original strand, 14392987 - 14393151
Alignment:
Q  74 ttcaaaggttgttcaaatgttttaatcacgcctat-cattacagaagactagaagcatgaagtaacggctaattcaaaagaatttgaaggcattagatgc 172  Q
    ||||||||||||||||  | ||||||| || |||  |||| |||||||| |||||  ||||  |||| ||| ||  |||| ||||||| ||||| |||||    
T  14392987 ttcaaaggttgttcaatggatttaatctcgtctaagcattgcagaagaccagaagagtgaaacaacgactattttgaaaggatttgaaagcattggatgc 14393086  T
Q  173 ttactctttggagaacgttggaaaaggacaattgtacgaagtgtacaacaactatctccactact 237  Q
    ||  |||||| ||| |||||  |||| |||||||||||||||||||||| |||||||||||||||    
T  14393087 ttgttctttgaagagcgttgacaaagtacaattgtacgaagtgtacaaccactatctccactact 14393151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 109 - 243
Target Start/End: Complemental strand, 15903339 - 15903204
Alignment:
Q  109 cattacagaagactagaagcatgaagtaacggctaattcaaaagaatttgaaggcattagatgcttact-ctttggagaacgttggaaaaggacaattgt 207  Q
    |||||||||||||||||||  ||||| |||| ||| ||  |||| ||||||| |||||  ||||||  | ||||| ||| | |||  |||| ||||||||    
T  15903339 cattacagaagactagaagagtgaagcaacgactattttgaaaggatttgaaagcattgcatgctttgttctttgaagagcattgacaaagtacaattgt 15903240  T
Q  208 acgaagtgtacaacaactatctccactactctgttt 243  Q
    ||||||||||||||||||||||||||||||| ||||    
T  15903239 acgaagtgtacaacaactatctccactactcagttt 15903204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 149 - 243
Target Start/End: Complemental strand, 31303486 - 31303392
Alignment:
Q  149 aaagaatttgaaggcattagatgcttactctttggagaacgttggaaaaggacaattgtacgaagtgtacaacaactatctccactactctgttt 243  Q
    |||| |||||||| |||| |||| ||  |||||| ||| |||||  |||| ||||||||||||||||||||||||||||||||||||||| ||||    
T  31303486 aaaggatttgaagacatttgatgtttgttctttgaagagcgttgacaaagtacaattgtacgaagtgtacaacaactatctccactactcagttt 31303392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 73 - 244
Target Start/End: Complemental strand, 47207884 - 47207711
Alignment:
Q  73 cttcaaaggttgttcaaatgttttaatcacgcctat--cattacagaagactagaagcatgaagtaacggctaattcaaaagaatttgaaggcattagat 170  Q
    |||||||||||||||||  | ||||||| || |||   |||| ||||||||| |||   ||||| |||||||| ||  |||  ||||||||||||| |||    
T  47207884 cttcaaaggttgttcaatggatttaatctcgtctaaagcattgcagaagactggaaaagtgaagcaacggctagtttgaaatgatttgaaggcattggat 47207785  T
Q  171 gcttactctttggagaacgttggaaaaggacaattgtacgaagtgtacaacaactatctccactactctgtttt 244  Q
    ||||  ||||   ||| |||||  |||| |||||||||||||||||||||| |||| |||||||||||||||||    
T  47207784 gcttgttcttcaaagagcgttgacaaagtacaattgtacgaagtgtacaaccactacctccactactctgtttt 47207711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 27 - 238
Target Start/End: Complemental strand, 13948559 - 13948347
Alignment:
Q  27 aagatcatcaggagctgaagatcatcagaaactgaaagaattgaagcttcaaaggttgttcaaatgttttaatcacgcctat-cattacagaagactaga 125  Q
    ||||||| ||| |||| ||| ||||||| |  || |||| || |||| ||||||| ||||||| || ||||||| || |||  |||| ||||||||| ||    
T  13948559 aagatcaccagaagctaaagctcatcaggagatgcaagacttaaagcgtcaaaggatgttcaattgatttaatctcgtctaagcattgcagaagactgga 13948460  T
Q  126 agcatgaagtaacggctaattcaaaagaatttgaaggcattagatgcttactctttggagaacgttggaaaaggacaattgtacgaagtgtacaacaact 225  Q
    |   ||||| |||| ||| ||  |||| ||||||||||||| |||||||  |||||| ||| |||||  | || |||||||||||||||||||||| | |    
T  13948459 atagtgaagcaacgactattttgaaaggatttgaaggcattggatgcttgttctttgaagagcgttgacatagtacaattgtacgaagtgtacaaccatt 13948360  T
Q  226 atctccactactc 238  Q
    ||||||| |||||    
T  13948359 atctccattactc 13948347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 115 - 238
Target Start/End: Original strand, 22804048 - 22804171
Alignment:
Q  115 agaagactagaagcatgaagtaacggctaattcaaaagaatttgaaggcattagatgcttactctttggagaacgttggaaaaggacaattgtacgaagt 214  Q
    ||||||| |||||  ||||| |||||||| ||  |||| | ||||||||||| |||| ||  |||||| ||| |||||  |||| |||||||||||||||    
T  22804048 agaagaccagaagagtgaagcaacggctattttgaaaggacttgaaggcattcgatgattgttctttgaagagcgttgacaaagtacaattgtacgaagt 22804147  T
Q  215 gtacaacaactatctccactactc 238  Q
    ||| ||| ||||||||||||||||    
T  22804148 gtaaaaccactatctccactactc 22804171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 149 - 244
Target Start/End: Original strand, 38177702 - 38177797
Alignment:
Q  149 aaagaatttgaaggcattagatgcttactctttggagaacgttggaaaaggacaattgtacgaagtgtacaacaactatctccactactctgtttt 244  Q
    |||| ||||||||||||| |||||||  |||||  ||| |||||  |||| |||||||||||||||||||||| |||| |||||||||||| ||||    
T  38177702 aaaggatttgaaggcattggatgcttgttctttaaagagcgttgacaaagtacaattgtacgaagtgtacaaccactacctccactactctatttt 38177797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 149 - 243
Target Start/End: Original strand, 13780643 - 13780737
Alignment:
Q  149 aaagaatttgaaggcattagatgcttactctttggagaacgttggaaaaggacaattgtacgaagtgtacaacaactatctccactactctgttt 243  Q
    |||| ||||||||||||| |||||||  | |||| ||| |||||  |||| |||||||||||||||||||||| ||||||||||| |||| ||||    
T  13780643 aaaggatttgaaggcattggatgcttgttatttgaagagcgttgacaaagtacaattgtacgaagtgtacaaccactatctccacgactcagttt 13780737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 62 - 237
Target Start/End: Original strand, 16658589 - 16658765
Alignment:
Q  62 aagaattgaagcttcaaaggttgttcaaatgttttaatcacg-cctatcattacagaagactagaagca-tgaagtaacggctaattcaaaagaatttga 159  Q
    |||| ||||| ||||||||||||||||| || || |||| || || | ||||||| ||||| ||| ||| ||||| |||| ||| ||  |||| ||||||    
T  16658589 aagacttgaaacttcaaaggttgttcaattgattcaatctcgtccaagcattacaaaagaccaga-gcagtgaagcaacgactattttgaaaggatttga 16658687  T
Q  160 aggcattagatgcttactctttggagaacgttggaaaaggacaattgtacgaagtgtacaacaactatctccactact 237  Q
    | ||||| |||||||| |||||| ||| |||||  | |  |||||||||||||||||||||| |||| ||||||||||    
T  16658688 aagcattggatgcttattctttgaagagcgttgacataatacaattgtacgaagtgtacaaccactacctccactact 16658765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 115 - 243
Target Start/End: Complemental strand, 20646288 - 20646160
Alignment:
Q  115 agaagactagaagcatgaagtaacggctaattcaaaagaatttgaaggcattagatgcttactctttggagaacgttggaaaaggacaattgtacgaagt 214  Q
    ||||||| |||||  ||||| |||| ||| ||  |||| ||||||| ||||| |||||||  |||||| ||| |||||  | || |||||||||||||||    
T  20646288 agaagaccagaagagtgaagcaacgtctattttgaaaggatttgaaagcattggatgcttgttctttgaagagcgttgacatagtacaattgtacgaagt 20646189  T
Q  215 gtacaacaactatctccactactctgttt 243  Q
    ||||||| |||| ||||||||||| ||||    
T  20646188 gtacaaccactacctccactactcagttt 20646160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 70 - 244
Target Start/End: Complemental strand, 2561368 - 2561193
Alignment:
Q  70 aagcttcaaaggttgttcaaatgttttaatcacgcctat-cattacagaagactagaagcatgaagtaacggctaattcaaaagaatttgaaggcattag 168  Q
    ||||||||||||||||||||  | ||||||| || |||  |||| ||||||||| ||||  ||||| |||  ||| ||  |||| ||||||||  ||| |    
T  2561368 aagcttcaaaggttgttcaatggatttaatctcgtctaagcattgcagaagactggaagagtgaagcaacaactattttgaaaggatttgaagaaattgg 2561269  T
Q  169 atgcttactctttggagaacgttggaaaaggacaattgtacgaagtgtacaacaactatctccactactctgtttt 244  Q
    ||||||  ||||   ||| |||||  |||| |||| ||||||||||||||||| |||| |||||||||||||||||    
T  2561268 atgcttgttcttcaaagatcgttgacaaagtacaagtgtacgaagtgtacaaccactacctccactactctgtttt 2561193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 149 - 244
Target Start/End: Complemental strand, 14955527 - 14955432
Alignment:
Q  149 aaagaatttgaaggcattagatgcttactctttggagaacgttggaaaaggacaattgtacgaagtgtacaacaactatctccactactctgtttt 244  Q
    |||| ||||||||||||| |||||||| ||||   ||| |||||  |||| ||  |||||||||||||||||| |||| |||||||||||||||||    
T  14955527 aaagtatttgaaggcattggatgcttattcttcaaagagcgttgacaaagtacgtttgtacgaagtgtacaaccactacctccactactctgtttt 14955432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 149 - 244
Target Start/End: Original strand, 49553548 - 49553643
Alignment:
Q  149 aaagaatttgaaggcattagatgcttactctttggagaacgttggaaaaggacaattgtacgaagtgtacaacaactatctccactactctgtttt 244  Q
    |||| ||||||||||||| |||| ||  ||||  |||| |||||  |||| |||||||||||||||||||||| |||| |||||||||||| ||||    
T  49553548 aaaggatttgaaggcattggatgtttgttcttcagagagcgttgacaaagtacaattgtacgaagtgtacaaccactacctccactactctatttt 49553643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 204 - 246
Target Start/End: Complemental strand, 11223608 - 11223566
Alignment:
Q  204 ttgtacgaagtgtacaacaactatctccactactctgttttgt 246  Q
    |||||||||||||||||| ||||||||||||||||||||||||    
T  11223608 ttgtacgaagtgtacaaccactatctccactactctgttttgt 11223566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 195 - 244
Target Start/End: Original strand, 25398360 - 25398409
Alignment:
Q  195 aaaggacaattgtacgaagtgtacaacaactatctccactactctgtttt 244  Q
    |||| |||||||||||||||||||||| |||| |||||||||||||||||    
T  25398360 aaagcacaattgtacgaagtgtacaaccactacctccactactctgtttt 25398409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 195 - 244
Target Start/End: Complemental strand, 40799928 - 40799879
Alignment:
Q  195 aaaggacaattgtacgaagtgtacaacaactatctccactactctgtttt 244  Q
    |||| |||||||||||||||||||||| |||| |||||||||||||||||    
T  40799928 aaagtacaattgtacgaagtgtacaaccactacctccactactctgtttt 40799879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 109 - 242
Target Start/End: Original strand, 46349863 - 46349996
Alignment:
Q  109 cattacagaagactagaagcatgaagtaacggctaattcaaaagaatttgaaggcattagatgcttactctttggagaacgttggaaaaggacaattgta 208  Q
    |||| ||||||||| |||   ||||| |||| ||||||  |||| ||||||||||||| |||||||  ||||  |||||| |||  |||| || ||||||    
T  46349863 cattgcagaagactggaaaagtgaagcaacgactaatttgaaaggatttgaaggcattggatgcttgttcttcagagaacattgacaaagtacgattgta 46349962  T
Q  209 cgaagtgtacaacaactatctccactactctgtt 242  Q
    ||||||||||||| |||  |||||||||| ||||    
T  46349963 cgaagtgtacaaccactgcctccactactatgtt 46349996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 204 - 252
Target Start/End: Complemental strand, 5213622 - 5213574
Alignment:
Q  204 ttgtacgaagtgtacaacaactatctccactactctgttttgtgtatgc 252  Q
    |||||||||||||||||| |||| ||||||||||||||||||| |||||    
T  5213622 ttgtacgaagtgtacaaccactacctccactactctgttttgtctatgc 5213574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 149 - 237
Target Start/End: Original strand, 17238981 - 17239069
Alignment:
Q  149 aaagaatttgaaggcattagatgcttactctttggagaacgttggaaaaggacaattgtacgaagtgtacaacaactatctccactact 237  Q
    |||| ||||||| ||||| |||| ||  |||||| | | |||||  |||| |||||||||||||||||||||| |||||||||||||||    
T  17238981 aaaggatttgaaagcattggatgattgttctttgaatagcgttgacaaagtacaattgtacgaagtgtacaaccactatctccactact 17239069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 140 - 256
Target Start/End: Complemental strand, 17697715 - 17697600
Alignment:
Q  140 gctaattcaaaagaatttgaaggcattagatgcttactctttggagaacgttggaaaaggacaattgtacgaagtgtacaacaactatctccactactct 239  Q
    ||||||||| | ||||||||||||||| ||||||||  | | | |||||   | |||| |||||| |||| || |||||||| |||||||| ||||||||    
T  17697715 gctaattcagaggaatttgaaggcattggatgcttatccatagaagaacacagaaaaacgacaatagtac-aattgtacaaccactatctctactactct 17697617  T
Q  240 gttttgtgtatgcaata 256  Q
    ||||||||| |||||||    
T  17697616 gttttgtgtctgcaata 17697600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 204 - 244
Target Start/End: Original strand, 21605768 - 21605808
Alignment:
Q  204 ttgtacgaagtgtacaacaactatctccactactctgtttt 244  Q
    |||||||||||||||||| ||||||||||||||||||||||    
T  21605768 ttgtacgaagtgtacaaccactatctccactactctgtttt 21605808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 155 - 238
Target Start/End: Original strand, 12963150 - 12963233
Alignment:
Q  155 tttgaaggcattagatgcttactctttggagaacgttggaaaaggacaattgtacgaagtgtacaacaactatctccactactc 238  Q
    |||||| ||||| |||||||  |||||| |||  ||||  | || |||||||||||||||||||||| ||||||||||||||||    
T  12963150 tttgaaagcattggatgcttgttctttgaagagtgttgacatagtacaattgtacgaagtgtacaaccactatctccactactc 12963233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 70 - 244
Target Start/End: Complemental strand, 28582286 - 28582111
Alignment:
Q  70 aagcttcaaaggttgttcaaatgttttaatcacgcctat-cattacagaagactagaagcatgaagtaacggctaattcaaaagaatttgaaggcattag 168  Q
    |||||||||||| |||||||  | ||||||| || |||| |||| ||||||| | ||||  ||||| |||| ||| ||  |||| |||| | |||||| |    
T  28582286 aagcttcaaaggctgttcaatggatttaatctcgtctatgcattgcagaagattggaagagtgaagcaacgactattttgaaaggatttaatggcattgg 28582187  T
Q  169 atgcttactctttggagaacgttggaaaaggacaattgtacgaagtgtacaacaactatctccactactctgtttt 244  Q
    ||||||  ||||   ||| |||||  |||  |||||||||||||||||||||| |||| ||||||||||| |||||    
T  28582186 atgcttgttcttcaaagagcgttgacaaaatacaattgtacgaagtgtacaaccactacctccactactcagtttt 28582111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 70 - 244
Target Start/End: Original strand, 47405400 - 47405575
Alignment:
Q  70 aagcttcaaaggttgttcaaatgttttaatcacgcctat-cattacagaagactagaagcatgaagtaacggctaattcaaaagaatttgaaggcattag 168  Q
    |||||||||||| |||||||  | ||||||| || |||  |||| ||||||||| |||  |||||| |||  ||| ||  |||| ||||||||||||| |    
T  47405400 aagcttcaaaggctgttcaatggatttaatctcgtctaagcattgcagaagactggaaaaatgaagcaacaactagtttgaaaggatttgaaggcatttg 47405499  T
Q  169 atgcttactctttggagaacgttggaaaaggacaattgtacgaagtgtacaacaactatctccactactctgtttt 244  Q
    ||| ||  ||||   |||  ||||  |||| |||||||||||||||||||||| |||| |||||||||| ||||||    
T  47405500 atgtttgttcttcaaagagtgttgacaaagtacaattgtacgaagtgtacaaccactacctccactactatgtttt 47405575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 195 - 241
Target Start/End: Original strand, 18121727 - 18121773
Alignment:
Q  195 aaaggacaattgtacgaagtgtacaacaactatctccactactctgt 241  Q
    |||| |||||||||||||||||||||| |||| ||||||||||||||    
T  18121727 aaagtacaattgtacgaagtgtacaaccactacctccactactctgt 18121773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 195 - 241
Target Start/End: Original strand, 18142857 - 18142903
Alignment:
Q  195 aaaggacaattgtacgaagtgtacaacaactatctccactactctgt 241  Q
    |||| |||||||||||||||||||||| |||| ||||||||||||||    
T  18142857 aaagtacaattgtacgaagtgtacaaccactacctccactactctgt 18142903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 130 - 244
Target Start/End: Complemental strand, 29855528 - 29855414
Alignment:
Q  130 tgaagtaacggctaattcaaaagaatttgaaggcattagatgcttactctttggagaacgttggaaaaggacaattgtacgaagtgtacaacaactatct 229  Q
    ||||| |||||||| ||  |||||||||||||||||| |||||||  ||||   | | |||||  | || ||  |||||||||||||||||| |||| ||    
T  29855528 tgaagcaacggctagtttgaaagaatttgaaggcattggatgcttgttcttcaaaaagcgttgacagagtacgtttgtacgaagtgtacaaccactacct 29855429  T
Q  230 ccactactctgtttt 244  Q
    |||||||||||||||    
T  29855428 ccactactctgtttt 29855414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 149 - 243
Target Start/End: Original strand, 29951497 - 29951591
Alignment:
Q  149 aaagaatttgaaggcattagatgcttactctttggagaacgttggaaaaggacaattgtacgaagtgtacaacaactatctccactactctgttt 243  Q
    |||| ||||||||||||| |||||||  |||||| |||  |||   |||| |||||||||| ||||||||||| ||||||||||| |||| ||||    
T  29951497 aaaggatttgaaggcattggatgcttgttctttgaagagagttaacaaagtacaattgtacaaagtgtacaaccactatctccaccactcagttt 29951591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 149 - 243
Target Start/End: Original strand, 30000651 - 30000745
Alignment:
Q  149 aaagaatttgaaggcattagatgcttactctttggagaacgttggaaaaggacaattgtacgaagtgtacaacaactatctccactactctgttt 243  Q
    |||| ||||||||||||| |||||||  |||||| |||  |||   |||| |||||||||| ||||||||||| ||||||||||| |||| ||||    
T  30000651 aaaggatttgaaggcattggatgcttgttctttgaagagagttaacaaagtacaattgtacaaagtgtacaaccactatctccaccactcagttt 30000745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 27 - 244
Target Start/End: Complemental strand, 52920628 - 52920411
Alignment:
Q  27 aagatcatcaggagctgaagatcatcagaaactgaaagaattgaagcttcaaaggttgttcaaatgttttaatcacgcctat-cattacagaagactaga 125  Q
    ||||||| ||| |||||||| ||||||| |  || |||| || ||| |||||||| || ||||  | ||||||| || |||  |||| ||||||||||||    
T  52920628 aagatcaccagaagctgaagttcatcaggagatgcaagacttaaagtttcaaaggctgctcaatggatttaatctcgtctaagcattgcagaagactaga 52920529  T
Q  126 agcatgaagtaacggctaattcaaaagaatttgaaggcattagatgcttactctttggagaacgttggaaaaggacaattgtacgaagtgtacaacaact 225  Q
    ||  ||||| |||  |||||| ||| | ||||||||||||| |||||||  |||||  ||| |||||  |||  | ||||||||||||| |||||| |||    
T  52920528 agagtgaagcaacaactaatttaaa-gtatttgaaggcatttgatgcttgttctttaaagagcgttgacaaattaaaattgtacgaagtatacaaccact 52920430  T
Q  226 atctccactactctgtttt 244  Q
    | ||| ||||| |||||||    
T  52920429 acctctactaccctgtttt 52920411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 203 - 244
Target Start/End: Complemental strand, 11868315 - 11868274
Alignment:
Q  203 attgtacgaagtgtacaacaactatctccactactctgtttt 244  Q
    ||||||||||||||||||| |||| |||||||||||||||||    
T  11868315 attgtacgaagtgtacaaccactacctccactactctgtttt 11868274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 204 - 244
Target Start/End: Original strand, 1728129 - 1728169
Alignment:
Q  204 ttgtacgaagtgtacaacaactatctccactactctgtttt 244  Q
    |||||||||||||||||| ||||||| ||||||||||||||    
T  1728129 ttgtacgaagtgtacaaccactatctgcactactctgtttt 1728169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 204 - 244
Target Start/End: Original strand, 46796481 - 46796521
Alignment:
Q  204 ttgtacgaagtgtacaacaactatctccactactctgtttt 244  Q
    |||||||||||||||||| ||||||||||||||| ||||||    
T  46796481 ttgtacgaagtgtacaaccactatctccactactttgtttt 46796521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 204 - 240
Target Start/End: Original strand, 49666519 - 49666555
Alignment:
Q  204 ttgtacgaagtgtacaacaactatctccactactctg 240  Q
    |||||||||||||||||| ||||||||||||||||||    
T  49666519 ttgtacgaagtgtacaaccactatctccactactctg 49666555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 204 - 244
Target Start/End: Original strand, 53056841 - 53056881
Alignment:
Q  204 ttgtacgaagtgtacaacaactatctccactactctgtttt 244  Q
    |||||||||||||||||| |||| |||||||||||||||||    
T  53056841 ttgtacgaagtgtacaaccactacctccactactctgtttt 53056881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 204 - 243
Target Start/End: Complemental strand, 37412650 - 37412611
Alignment:
Q  204 ttgtacgaagtgtacaacaactatctccactactctgttt 243  Q
    ||||||||| |||||||| |||||||||||||||||||||    
T  37412650 ttgtacgaaatgtacaaccactatctccactactctgttt 37412611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 204 - 246
Target Start/End: Complemental strand, 2785109 - 2785067
Alignment:
Q  204 ttgtacgaagtgtacaacaactatctccactactctgttttgt 246  Q
    |||||||||||||||||| |||| ||||||||||||| |||||    
T  2785109 ttgtacgaagtgtacaaccactacctccactactctgatttgt 2785067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 214 - 264
Target Start/End: Complemental strand, 10851842 - 10851790
Alignment:
Q  214 tgtacaacaactatctccactactctg--ttttgtgtatgcaatagtacaaga 264  Q
    |||||||| || |||||||||||||||  |||||||| |||||||||||||||    
T  10851842 tgtacaaccaccatctccactactctgttttttgtgtctgcaatagtacaaga 10851790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 211 - 244
Target Start/End: Complemental strand, 13557809 - 13557776
Alignment:
Q  211 aagtgtacaacaactatctccactactctgtttt 244  Q
    ||||||||||| ||||||||||||||||||||||    
T  13557809 aagtgtacaaccactatctccactactctgtttt 13557776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 200 - 233
Target Start/End: Original strand, 19889055 - 19889088
Alignment:
Q  200 acaattgtacgaagtgtacaacaactatctccac 233  Q
    |||||||||||||||||||||| |||||||||||    
T  19889055 acaattgtacgaagtgtacaaccactatctccac 19889088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 207 - 244
Target Start/End: Complemental strand, 21640909 - 21640872
Alignment:
Q  207 tacgaagtgtacaacaactatctccactactctgtttt 244  Q
    ||||||||||||||| ||||||||||||||||| ||||    
T  21640909 tacgaagtgtacaaccactatctccactactctatttt 21640872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 204 - 244
Target Start/End: Original strand, 9700150 - 9700190
Alignment:
Q  204 ttgtacgaagtgtacaacaactatctccactactctgtttt 244  Q
    |||||||||||||| ||| ||||||| ||||||||||||||    
T  9700150 ttgtacgaagtgtataaccactatctgcactactctgtttt 9700190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 204 - 244
Target Start/End: Original strand, 20627545 - 20627585
Alignment:
Q  204 ttgtacgaagtgtacaacaactatctccactactctgtttt 244  Q
    |||||||||||||||||| |||| |||||||||| ||||||    
T  20627545 ttgtacgaagtgtacaaccactacctccactactttgtttt 20627585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 204 - 244
Target Start/End: Original strand, 21636784 - 21636824
Alignment:
Q  204 ttgtacgaagtgtacaacaactatctccactactctgtttt 244  Q
    |||||||||||||||||| ||||  ||||||||||||||||    
T  21636784 ttgtacgaagtgtacaaccactacttccactactctgtttt 21636824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 204 - 244
Target Start/End: Original strand, 24775648 - 24775688
Alignment:
Q  204 ttgtacgaagtgtacaacaactatctccactactctgtttt 244  Q
    |||||||||||||||||| ||||  ||||||||||||||||    
T  24775648 ttgtacgaagtgtacaaccactacatccactactctgtttt 24775688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 204 - 244
Target Start/End: Original strand, 30054331 - 30054371
Alignment:
Q  204 ttgtacgaagtgtacaacaactatctccactactctgtttt 244  Q
    ||||||||| |||||||| |||| |||||||||||||||||    
T  30054331 ttgtacgaaatgtacaaccactaactccactactctgtttt 30054371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0273 (Bit Score: 172; Significance: 2e-92; HSPs: 1)
Name: scaffold0273
Description:

Target: scaffold0273; HSP #1
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 8 - 275
Target Start/End: Complemental strand, 5868 - 5602
Alignment:
Q  8 gacatcatcagaggttctaaagatcatcaggagctgaagatcatcagaaactgaaagaattgaagcttcaaaggttgttcaaatgttttaatcacgccta 107  Q
    |||||||||||| | ||| |||||||||||||| ||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||| |||||    
T  5868 gacatcatcagaagctctgaagatcatcaggagttgaagatcatcagaagctgaaagaattgaagcttcaaaggctgttcaaatgttttaatcatgccta 5769  T
Q  108 tcattacagaagactagaagcatgaagtaacggctaattcaaaagaatttgaaggcattagatgcttactctttggagaacgttggaaaaggacaattgt 207  Q
    ||||| |||||||||||||| |||||| |||| ||| |||||| ||||||||||||||| |||||||| |||||||||||||||||||||  ||||||||    
T  5768 tcattccagaagactagaagaatgaagcaacgactatttcaaatgaatttgaaggcattggatgcttattctttggagaacgttggaaaa-tacaattgt 5670  T
Q  208 acgaagtgtacaacaactatctccactactctgttttgtgtatgcaatagtacaagagaaacagttgt 275  Q
    |||||||||||||| |||| ||||||||||| ||||||||| |||||||||||||||  |||||||||    
T  5669 acgaagtgtacaaccactacctccactactcagttttgtgtctgcaatagtacaagaacaacagttgt 5602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 146; Significance: 6e-77; HSPs: 1)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 146; E-Value: 6e-77
Query Start/End: Original strand, 27 - 264
Target Start/End: Original strand, 1409 - 1646
Alignment:
Q  27 aagatcatcaggagctgaagatcatcagaaactgaaagaattgaagcttcaaaggttgttcaaatgttttaatcacgcctatcattacagaagactagaa 126  Q
    |||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||| |||||||||||| |||||| |||||||||| |     
T  1409 aagatcatcaggagctgaagatcatcagaagctgagagaattgaagcttcaaaggttgttcaaatgatttaatcacgcccatcattgcagaagactatag 1508  T
Q  127 gcatgaagtaacggctaattcaaaagaatttgaaggcattagatgcttactctttggagaacgttggaaaaggacaattgtacgaagtgtacaacaacta 226  Q
    |  ||||| |||| ||| |||||||| ||||||||||||| || | ||| |||||| |||||||||||||||||||||||||||||||||||||| ||||    
T  1509 gagtgaagcaacgactatttcaaaaggatttgaaggcattggacgtttattctttgaagaacgttggaaaaggacaattgtacgaagtgtacaaccacta 1608  T
Q  227 tctccactactctgttttgtgtatgcaatagtacaaga 264  Q
    ||||||||||| | |||||||| |||||||| ||||||    
T  1609 tctccactactttattttgtgtctgcaataggacaaga 1646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 144; Significance: 9e-76; HSPs: 52)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 144; E-Value: 9e-76
Query Start/End: Original strand, 41 - 275
Target Start/End: Original strand, 18896468 - 18896703
Alignment:
Q  41 ctgaagatcatcagaaactgaaagaattgaagcttcaaaggttgttcaaatgtt-ttaatcacgcctatcattacagaagactagaagcatgaagtaacg 139  Q
    ||||||||| |||||| ||||||| ||||||| |||||| | |||| ||||| | |||||||||||||||||| |||||||||||||||| |||| ||||    
T  18896468 ctgaagatcttcagaagctgaaaggattgaagtttcaaaagatgtttaaatgatgttaatcacgcctatcattgcagaagactagaagcaagaagcaacg 18896567  T
Q  140 gctaattcaaaagaatttgaaggcattagatgcttactctttggagaacgttggaaaaggacaattgtacgaagtgtacaacaactatctccactactct 239  Q
    ||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||| |||||||||||||||||| |||| |||||||||| |    
T  18896568 gctaattcaaaagaatttgaaggcattggatgcttagtctttggagaacgttggaaaaggacagttgtacgaagtgtacaaccactacctccactacttt 18896667  T
Q  240 gttttgtgtatgcaatagtacaagagaaacagttgt 275  Q
    ||||| ||| |||||||||||||||  |||||||||    
T  18896668 gttttatgtctgcaatagtacaagaacaacagttgt 18896703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 70 - 243
Target Start/End: Original strand, 12613716 - 12613888
Alignment:
Q  70 aagcttcaaaggttgttcaaatgttttaatcacgcctatcattacagaagactagaagcatgaagtaacggctaattcaaaagaatttgaaggcattaga 169  Q
    ||||||||||||||||||||| | |||||||||||||| |||| |||||||| |||||  ||||| ||||||||||||||||| ||||||| ||||| |     
T  12613716 aagcttcaaaggttgttcaaaagatttaatcacgcctagcattgcagaagaccagaagagtgaagcaacggctaattcaaaag-atttgaaagcattggt 12613814  T
Q  170 tgcttactctttggagaacgttggaaaaggacaattgtacgaagtgtacaacaactatctccactactctgttt 243  Q
    |||||  |||||| ||| |||||| |||| |||||||||||||||||||||| |||| || |||||||||||||    
T  12613815 tgcttgttctttgaagagcgttggcaaagtacaattgtacgaagtgtacaaccactaccttcactactctgttt 12613888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 70 - 243
Target Start/End: Original strand, 21191766 - 21191939
Alignment:
Q  70 aagcttcaaaggttgttcaaatgttttaatcacgcctatcattacagaagactagaagcatgaagtaacggctaattcaaaagaatttgaaggcattaga 169  Q
    |||||||||||||||||||||   ||||||||| || | |||| |||||||| |||||  ||||| ||| ||||||||||||| ||||||||||||| ||    
T  21191766 aagcttcaaaggttgttcaaagtatttaatcacacccaacattgcagaagaccagaagagtgaagcaacagctaattcaaaaggatttgaaggcattgga 21191865  T
Q  170 tgcttactctttggagaacgttggaaaaggacaattgtacgaagtgtacaacaactatctccactactctgttt 243  Q
    |||||  |||||| ||| |||||| |||| |||||||||||||||||||||| |||| ||||||||||||||||    
T  21191866 tgcttgttctttgaagagcgttggcaaagtacaattgtacgaagtgtacaaccactacctccactactctgttt 21191939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 30 - 246
Target Start/End: Original strand, 17024825 - 17025041
Alignment:
Q  30 atcatcaggagctgaagatcatcagaaactgaaagaattgaagcttcaaaggttgttcaaatgttttaatcacgcctatcattacagaagactagaagca 129  Q
    |||| ||| |||||||||||||||||| |||| |||||| ||||||||| |  |||||||| | ||||||||||| || |||| || ||||| | |||      
T  17024825 atcaccagaagctgaagatcatcagaagctgagagaattaaagcttcaatgtctgttcaaaggatttaatcacgcataacattgcaaaagaccataagag 17024924  T
Q  130 tgaagtaacggctaattcaaaagaatttgaaggcattagatgcttactctttggagaacgttggaaaaggacaattgtacgaagtgtacaacaactatct 229  Q
    ||||| |||| |||||||||||| ||||||||||||| |||||||  |||||  ||| ||||| |||| ||||||||||||||||||||||| |||| ||    
T  17024925 tgaagcaacgactaattcaaaaggatttgaaggcattggatgcttgttctttaaagagcgttgaaaaatgacaattgtacgaagtgtacaaccactacct 17025024  T
Q  230 ccactactctgttttgt 246  Q
    ||||| || ||||||||    
T  17025025 ccacttctttgttttgt 17025041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 98 - 264
Target Start/End: Complemental strand, 17018728 - 17018563
Alignment:
Q  98 atcacgcctatcattacagaagactagaagcatgaagtaacggctaattcaaaagaatttgaaggcattagatgcttactctttggagaacgttggaaaa 197  Q
    ||||||||||||||| ||||||| ||||||| || || |||  ||| |||| | ||||| ||| ||||| |||||||| |||||||||||||||||||||    
T  17018728 atcacgcctatcattgcagaagaatagaagcttggagcaacaactacttcagaggaattggaaagcattggatgcttattctttggagaacgttggaaaa 17018629  T
Q  198 ggacaattgtacgaagtgtacaacaactatctccactactctgttttgtgtatgcaatagtacaaga 264  Q
    ||||||| || | ||||||||||| ||||||| ||||||| |||||||||| |||||||||||||||    
T  17018628 ggacaatagtgc-aagtgtacaaccactatcttcactactttgttttgtgtctgcaatagtacaaga 17018563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 69 - 275
Target Start/End: Complemental strand, 18615068 - 18614874
Alignment:
Q  69 gaagcttcaaaggttgttcaaatgttttaatcacgcctatcattacagaagactagaagcatgaagtaacggctaattcaaa-agaatttgaaggcatta 167  Q
    |||||||||||| ||||||||||||| | |||||||||||||||||||||||    |||| | ||| || | |||||||||| | | ||||||||||||     
T  18615068 gaagcttcaaagtttgttcaaatgttattatcacgcctatcattacagaaga----aagcttaaagcaatgactaattcaaagaaattttgaaggcattg 18614973  T
Q  168 gatgcttactctttggagaacgttggaaaaggacaattgtacgaagtgtacaacaactatctccactactctgttttgtgtatgcaatagtacaagagaa 267  Q
     |||||||  |||||||||||||||||||||||||||          ||||||| | ||||||||||||| |||||||||| |||||||||||||||  |    
T  18614972 tatgcttatactttggagaacgttggaaaaggacaat---------agtacaaccattatctccactactatgttttgtgtctgcaatagtacaagaaca 18614882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 70 - 243
Target Start/End: Original strand, 33256251 - 33256425
Alignment:
Q  70 aagcttcaaaggttgttcaaatgttttaatcacgcctat-cattacagaagactagaagcatgaagtaacggctaattcaaaagaatttgaaggcattag 168  Q
    ||||||||||||||||||||  | ||||||| || |||  |||| ||||||||| ||||  ||||| |||| ||| || ||||| ||||||||||||| |    
T  33256251 aagcttcaaaggttgttcaatggatttaatctcgtctaagcattgcagaagactggaagagtgaagcaacgactattttaaaaggatttgaaggcattgg 33256350  T
Q  169 atgcttactctttggagaacgttggaaaaggacaattgtacgaagtgtacaacaactatctccactactctgttt 243  Q
    ||||||  |||||| ||  |||||  |||| |||||||||||||||||||||| |||||||||||||||| ||||    
T  33256351 atgcttgttctttgaagggcgttgacaaagtacaattgtacgaagtgtacaaccactatctccactactcagttt 33256425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 70 - 243
Target Start/End: Original strand, 33276423 - 33276597
Alignment:
Q  70 aagcttcaaaggttgttcaaatgttttaatcacgcctat-cattacagaagactagaagcatgaagtaacggctaattcaaaagaatttgaaggcattag 168  Q
    ||||||||||||||||||||  | ||||||| || |||  |||| ||||||||| ||||  ||||| |||| ||| || ||||| ||||||||||||| |    
T  33276423 aagcttcaaaggttgttcaatggatttaatctcgtctaagcattgcagaagactggaagagtgaagcaacgactattttaaaaggatttgaaggcattgg 33276522  T
Q  169 atgcttactctttggagaacgttggaaaaggacaattgtacgaagtgtacaacaactatctccactactctgttt 243  Q
    ||||||  |||||| ||  |||||  |||| |||||||||||||||||||||| |||||||||||||||| ||||    
T  33276523 atgcttgttctttgaagggcgttgacaaagtacaattgtacgaagtgtacaaccactatctccactactcagttt 33276597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 27 - 244
Target Start/End: Complemental strand, 22154080 - 22153862
Alignment:
Q  27 aagatcatcaggagctgaagatcatcagaaactgaaagaattgaagcttcaaaggttgttcaaatgttttaatcacgcctat-cattacagaagactaga 125  Q
    ||||||| ||| |||||||| ||||||| |  || |||| || |||||||||||| |||||||  | ||||||| || |||  |||| ||||||||||||    
T  22154080 aagatcaccagaagctgaagttcatcaggagatgcaagacttaaagcttcaaaggctgttcaatggatttaatctcgtctaagcattgcagaagactaga 22153981  T
Q  126 agcatgaagtaacggctaattcaaaagaatttgaaggcattagatgcttactctttggagaacgttggaaaaggacaattgtacgaagtgtacaacaact 225  Q
    |   ||||| |||  ||||||  |||| ||||||| ||||| |||| ||  |||||| ||| |||||  |||| |||||||||||||||||||||| |||    
T  22153980 atagtgaagcaacaactaatttgaaaggatttgaaagcattggatgattgttctttgaagagcgttgacaaagtacaattgtacgaagtgtacaaccact 22153881  T
Q  226 atctccactactctgtttt 244  Q
    | |||||||||||||||||    
T  22153880 acctccactactctgtttt 22153862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 70 - 243
Target Start/End: Original strand, 28492304 - 28492478
Alignment:
Q  70 aagcttcaaaggttgttcaaatgttttaatcacgcctat-cattacagaagactagaagcatgaagtaacggctaattcaaaagaatttgaaggcattag 168  Q
    ||||||||||||||||||||  | ||||||  || |||  |||| ||||||||||||||  ||||| |||  ||| ||  |||| ||||||||||||| |    
T  28492304 aagcttcaaaggttgttcaatggatttaatatcgtctaagcattgcagaagactagaagagtgaagcaacaactattttgaaaggatttgaaggcattgg 28492403  T
Q  169 atgcttactctttggagaacgttggaaaaggacaattgtacgaagtgtacaacaactatctccactactctgttt 243  Q
    ||||||  |||||| | | |||||  |||| |||||||||||||||||||||| |||||||||||||||| ||||    
T  28492404 atgcttgttctttgaatagcgttgacaaagtacaattgtacgaagtgtacaaccactatctccactactcagttt 28492478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 71 - 243
Target Start/End: Complemental strand, 1578046 - 1577873
Alignment:
Q  71 agcttcaaaggttgttcaaatgttttaatcacgcctat-cattacagaagactagaagcatgaagtaacggctaattcaaaagaatttgaaggcattaga 169  Q
    |||||||||||||||||||  | ||||||| || |||  |||| ||||||||| ||||  ||||| |||| ||| ||  |||||||||||| ||||| ||    
T  1578046 agcttcaaaggttgttcaatagatttaatctcgtctaagcattgcagaagactggaagagtgaagcaacgactattttgaaagaatttgaaagcattgga 1577947  T
Q  170 tgcttactctttggagaacgttggaaaaggacaattgtacgaagtgtacaacaactatctccactactctgttt 243  Q
    |||||  |||||  ||| |||||  |||| | |||||||| ||||||||||| |||||||||||||||| ||||    
T  1577946 tgcttgttcttttaagagcgttgacaaagtataattgtactaagtgtacaaccactatctccactactcagttt 1577873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 149 - 244
Target Start/End: Original strand, 22600162 - 22600257
Alignment:
Q  149 aaagaatttgaaggcattagatgcttactctttggagaacgttggaaaaggacaattgtacgaagtgtacaacaactatctccactactctgtttt 244  Q
    |||| ||||||||||||| |||||||  ||||   ||| |||||  |||| |||||||||||||||||||||| ||||||||||||||||||||||    
T  22600162 aaaggatttgaaggcattggatgcttgttcttcaaagagcgttgacaaagtacaattgtacgaagtgtacaaccactatctccactactctgtttt 22600257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 70 - 243
Target Start/End: Original strand, 20954373 - 20954547
Alignment:
Q  70 aagcttcaaaggttgttcaaatgttttaatcacgcctat-cattacagaagactagaagcatgaagtaacggctaattcaaaagaatttgaaggcattag 168  Q
    ||||||||||||||||||||  | ||||||| || |||  |||| ||||||||  ||||  ||||| || ||| | ||  |||| ||||||| ||||| |    
T  20954373 aagcttcaaaggttgttcaatggatttaatctcgtctaagcattgcagaagacaggaagagtgaagcaatggccattttgaaaggatttgaaagcattgg 20954472  T
Q  169 atgcttactctttggagaacgttggaaaaggacaattgtacgaagtgtacaacaactatctccactactctgttt 243  Q
    | ||||| |||||| ||| |||||  |||| |||||||||| ||||||||||| |||||||||||||||| ||||    
T  20954473 aggcttattctttgaagagcgttgacaaagtacaattgtaccaagtgtacaaccactatctccactactcagttt 20954547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 109 - 243
Target Start/End: Complemental strand, 21028933 - 21028799
Alignment:
Q  109 cattacagaagactagaagcatgaagtaacggctaattcaaaagaatttgaaggcattagatgcttactctttggagaacgttggaaaaggacaattgta 208  Q
    |||| |||||||| | |||  ||||| |||| |||||||||| ||| ||||||||||| ||||||| || |||| ||| || ||  |||| |||||||||    
T  21028933 cattgcagaagaccataagagtgaagcaacgactaattcaaatgaagttgaaggcattggatgcttgctttttgaagagcgctgacaaagtacaattgta 21028834  T
Q  209 cgaagtgtacaacaactatctccactactctgttt 243  Q
     |||||||||| | |||||||||||||||| ||||    
T  21028833 tgaagtgtacagccactatctccactactcagttt 21028799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 149 - 243
Target Start/End: Original strand, 22201716 - 22201810
Alignment:
Q  149 aaagaatttgaaggcattagatgcttactctttggagaacgttggaaaaggacaattgtacgaagtgtacaacaactatctccactactctgttt 243  Q
    |||| ||||||||||||| |||||||  ||| || ||| |||||  |||| |||||||||||||||||||||| |||||||||||||||| ||||    
T  22201716 aaaggatttgaaggcattggatgcttgttctatgaagagcgttgacaaagtacaattgtacgaagtgtacaaccactatctccactactcagttt 22201810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 70 - 233
Target Start/End: Complemental strand, 19717704 - 19717540
Alignment:
Q  70 aagcttcaaaggttgttcaaatgttttaatcacgcctat-cattacagaagactagaagcatgaagtaacggctaattcaaaagaatttgaaggcattag 168  Q
    ||||||||||||||||||||  | ||||||| || | |  |||| |||| |||| ||||  ||||| |||| ||| ||  |||| ||||||||||||  |    
T  19717704 aagcttcaaaggttgttcaatggatttaatctcgtcgaagcattgcagaggactggaagagtgaagcaacgactattttgaaaggatttgaaggcatcgg 19717605  T
Q  169 atgcttactctttggagaacgttggaaaaggacaattgtacgaagtgtacaacaactatctccac 233  Q
    ||||||  |||||| ||| |||||  |||| ||||||||||||||||||||||||||| ||||||    
T  19717604 atgcttgttctttgaagagcgttgacaaagtacaattgtacgaagtgtacaacaactaactccac 19717540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 149 - 244
Target Start/End: Original strand, 32785917 - 32786012
Alignment:
Q  149 aaagaatttgaaggcattagatgcttactctttggagaacgttggaaaaggacaattgtacgaagtgtacaacaactatctccactactctgtttt 244  Q
    |||| ||||||||||||| |||||||  ||||   ||| |||||  |||| |||||||||||||||||||||| ||||||||||||||| ||||||    
T  32785917 aaaggatttgaaggcattggatgcttgttcttaaaagagcgttgacaaagtacaattgtacgaagtgtacaaccactatctccactactatgtttt 32786012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 109 - 244
Target Start/End: Original strand, 39200932 - 39201067
Alignment:
Q  109 cattacagaagactagaagcatgaagtaacggctaattcaaaagaatttgaaggcattagatgcttactctttggagaacgttggaaaaggacaattgta 208  Q
    |||| |||||||||  |||  ||||| |||||||| ||  |||| |||||||| |||| |||||||  ||||   ||| |||||  |||| |||||||||    
T  39200932 cattgcagaagactgaaagagtgaagcaacggctagtttgaaaggatttgaagacattggatgcttgttcttcaaagagcgttgacaaagtacaattgta 39201031  T
Q  209 cgaagtgtacaacaactatctccactactctgtttt 244  Q
    ||||||||||||| |||| |||||||||||||||||    
T  39201032 cgaagtgtacaaccactacctccactactctgtttt 39201067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 28 - 238
Target Start/End: Complemental strand, 48704426 - 48704215
Alignment:
Q  28 agatcatcaggagctgaagatcatcagaaactgaaagaattgaagcttcaaaggttgttcaaatgttttaatcacgcctat-cattacagaagactagaa 126  Q
    |||||| ||| |||| ||| |||||||||  || |||| || ||||||||||||||||||||  | ||||||| ||  ||  || | ||||||||| |||    
T  48704426 agatcaccagaagctaaagttcatcagaagatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtttaagcaatgcagaagactggaa 48704327  T
Q  127 gcatgaagtaacggctaattcaaaagaatttgaaggcattagatgcttactctttggagaacgttggaaaaggacaattgtacgaagtgtacaacaacta 226  Q
    |  ||||  |||  ||| ||  |||| ||||||||||| | |||||||  |||||| |||||||||  |||| |||||||||||||||||||||| | |     
T  48704326 gagtgaaacaacaactattttgaaaggatttgaaggcactggatgcttgttctttgaagaacgttgacaaagtacaattgtacgaagtgtacaaccaatg 48704227  T
Q  227 tctccactactc 238  Q
    ||||||||||||    
T  48704226 tctccactactc 48704215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 27 - 235
Target Start/End: Complemental strand, 12284646 - 12284437
Alignment:
Q  27 aagatcatcaggagctgaagatcatcagaaactgaaagaattgaagcttcaaaggttgttcaaatgttttaatcacg-cctatcattacagaagactaga 125  Q
    ||||||| ||| |||||||| |||||||||  || |||| ||  |||||||||||||||||||  | || |||| || || | |||| || ||||| |||    
T  12284646 aagatcaccagaagctgaagttcatcagaagatgcaagacttagagcttcaaaggttgttcaatggattcaatctcgtccaagcattgcaaaagaccaga 12284547  T
Q  126 agcatgaagtaacggctaattcaaaagaatttgaaggcattagatgcttactctttggagaacgttggaaaaggacaattgtacgaagtgtacaacaact 225  Q
     |  ||||| |||| ||| ||  |||| ||||||| ||||| |||||||  |||||| ||| |||||  | || |||||||||||||||||||||  |||    
T  12284546 ggagtgaagcaacgactattttgaaaggatttgaaagcattggatgcttgttctttgaagagcgttgacatagtacaattgtacgaagtgtacaaacact 12284447  T
Q  226 atctccacta 235  Q
    ||||||||||    
T  12284446 atctccacta 12284437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 130 - 242
Target Start/End: Complemental strand, 2834809 - 2834697
Alignment:
Q  130 tgaagtaacggctaattcaaaagaatttgaaggcattagatgcttactctttggagaacgttggaaaaggacaattgtacgaagtgtacaacaactatct 229  Q
    ||||| |||||||||||  |||| ||||||||||||| |||||||  ||||   |||||||||  |||| || |||||||||| |||||||| |||  ||    
T  2834809 tgaagcaacggctaatttgaaaggatttgaaggcattggatgcttgttcttcaaagaacgttgacaaagtacgattgtacgaattgtacaaccactgcct 2834710  T
Q  230 ccactactctgtt 242  Q
    |||||||||||||    
T  2834709 ccactactctgtt 2834697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 149 - 244
Target Start/End: Original strand, 25448546 - 25448641
Alignment:
Q  149 aaagaatttgaaggcattagatgcttactctttggagaacgttggaaaaggacaattgtacgaagtgtacaacaactatctccactactctgtttt 244  Q
    |||| ||||||||||||| |||||||| ||||   ||| |||||  |||| ||  |||||||||||||||||| |||| |||||||||||||||||    
T  25448546 aaaggatttgaaggcattggatgcttattcttcaaagagcgttgacaaagtacgtttgtacgaagtgtacaaccactacctccactactctgtttt 25448641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 70 - 244
Target Start/End: Complemental strand, 29215977 - 29215802
Alignment:
Q  70 aagcttcaaaggttgttcaaatgttttaatcacgcctat-cattacagaagactagaagcatgaagtaacggctaattcaaaagaatttgaaggcattag 168  Q
    ||||||||||||||||| ||  | ||||||| || |||  |||| || ||||||||||   ||||| |||||||| ||  |||| ||||||||||||| |    
T  29215977 aagcttcaaaggttgtttaatggatttaatctcgtctaagcattgcaaaagactagaaaagtgaagcaacggctagtttgaaaggatttgaaggcattgg 29215878  T
Q  169 atgcttactctttggagaacgttggaaaaggacaattgtacgaagtgtacaacaactatctccactactctgtttt 244  Q
    ||||||  ||||   ||| || |   |||| |||||||||||||||||||||  |||| |||||||||||||||||    
T  29215877 atgcttgttcttcaaagagcgataacaaagtacaattgtacgaagtgtacaatcactagctccactactctgtttt 29215802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 70 - 244
Target Start/End: Complemental strand, 38282746 - 38282572
Alignment:
Q  70 aagcttcaaaggttgttcaaatgttttaatcacgcctat-cattacagaagactagaagcatgaagtaacggctaattcaaaagaatttgaaggcattag 168  Q
    ||||||||||||||||||||  | ||||||| || |||  |||  ||||||||| ||||  ||||| ||||| || ||  |||| |||| ||||||||      
T  38282746 aagcttcaaaggttgttcaatggatttaatctcgtctaagcatcgcagaagactggaagagtgaagcaacgggtattttgaaaggatttaaaggcattga 38282647  T
Q  169 atgcttactctttggagaacgttggaaaaggacaattgtacgaagtgtacaacaactatctccactactctgtttt 244  Q
    ||||||  ||||   ||| |||||  |||| ||||||||||||||| |||||| ||||||||||||||||||||||    
T  38282646 atgcttgttcttcaaagagcgttgacaaagtacaattgtacgaagt-tacaaccactatctccactactctgtttt 38282572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 158 - 275
Target Start/End: Complemental strand, 20909496 - 20909380
Alignment:
Q  158 gaaggcattagatgcttactctttggagaacgttggaaaaggacaattgtacgaagtgtacaacaactatctccactactctgttttgtgtatgcaatag 257  Q
    |||| ||||||||||||| |||| | ||| ||||||||||||||||| |||| |  | |||||| ||||||||||||| | |||||| | | | ||||||    
T  20909496 gaagacattagatgcttattcttggcagagcgttggaaaaggacaatagtac-atttctacaaccactatctccactaatatgttttctatctacaatag 20909398  T
Q  258 tacaagagaaacagttgt 275  Q
    |||||||  |||||||||    
T  20909397 tacaagaacaacagttgt 20909380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 203 - 244
Target Start/End: Complemental strand, 30572243 - 30572202
Alignment:
Q  203 attgtacgaagtgtacaacaactatctccactactctgtttt 244  Q
    ||||||||||||||||||| ||||||||||||||||||||||    
T  30572243 attgtacgaagtgtacaaccactatctccactactctgtttt 30572202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 195 - 244
Target Start/End: Complemental strand, 36134244 - 36134195
Alignment:
Q  195 aaaggacaattgtacgaagtgtacaacaactatctccactactctgtttt 244  Q
    |||| |||||||||||||||||||||| |||| |||||||||||||||||    
T  36134244 aaagtacaattgtacgaagtgtacaaccactacctccactactctgtttt 36134195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 204 - 244
Target Start/End: Complemental strand, 21702859 - 21702819
Alignment:
Q  204 ttgtacgaagtgtacaacaactatctccactactctgtttt 244  Q
    |||||||||||||||||| ||||||||||||||||||||||    
T  21702859 ttgtacgaagtgtacaaccactatctccactactctgtttt 21702819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 112 - 244
Target Start/End: Complemental strand, 35401946 - 35401814
Alignment:
Q  112 tacagaagactagaagcatgaagtaacggctaattcaaaagaatttgaaggcattagatgcttactctttggagaacgttggaaaaggacaattgtacga 211  Q
    ||||||||||| |||   ||||| |||| ||| ||  |||| ||||||||||||| |||||||  ||||   ||| |||||  |||| |||||||||| |    
T  35401946 tacagaagactggaaaagtgaagcaacgactattttgaaaggatttgaaggcattggatgcttgttcttcaaagagcgttgacaaagtacaattgtacaa 35401847  T
Q  212 agtgtacaacaactatctccactactctgtttt 244  Q
    |||||||||| |||| |||||||||| ||||||    
T  35401846 agtgtacaaccactacctccactactatgtttt 35401814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 204 - 244
Target Start/End: Original strand, 44821580 - 44821620
Alignment:
Q  204 ttgtacgaagtgtacaacaactatctccactactctgtttt 244  Q
    |||||||||||||||||| ||||||||||||||||||||||    
T  44821580 ttgtacgaagtgtacaactactatctccactactctgtttt 44821620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 204 - 244
Target Start/End: Complemental strand, 46089034 - 46088994
Alignment:
Q  204 ttgtacgaagtgtacaacaactatctccactactctgtttt 244  Q
    |||||||||||||||||| ||||||||||||||||||||||    
T  46089034 ttgtacgaagtgtacaaccactatctccactactctgtttt 46088994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 204 - 244
Target Start/End: Original strand, 48570266 - 48570306
Alignment:
Q  204 ttgtacgaagtgtacaacaactatctccactactctgtttt 244  Q
    |||||||||||||||||| ||||||||||||||||||||||    
T  48570266 ttgtacgaagtgtacaaccactatctccactactctgtttt 48570306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 70 - 244
Target Start/End: Complemental strand, 1900525 - 1900350
Alignment:
Q  70 aagcttcaaaggttgttcaaatgttttaatcacgcctat-cattacagaagactagaagcatgaagtaacggctaattcaaaagaatttgaaggcattag 168  Q
    |||||||||||||| |||||  | ||||||| || |||  |||| ||||||||| ||||  ||||| |||| ||| ||  |||| |||| ||||||||      
T  1900525 aagcttcaaaggttattcaatggatttaatctcgtctaagcattgcagaagactggaagagtgaagcaacgactattttgaaaggatttaaaggcattga 1900426  T
Q  169 atgcttactctttggagaacgttggaaaaggacaattgtacgaagtgtacaacaactatctccactactctgtttt 244  Q
    ||||||  ||||   ||| |||||  |||| ||| ||||| |||||||||||| |||| |||||||||||||||||    
T  1900425 atgcttgttcttcaaagagcgttgacaaagtacagttgtaagaagtgtacaaccactacctccactactctgtttt 1900350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 70 - 244
Target Start/End: Complemental strand, 2267269 - 2267094
Alignment:
Q  70 aagcttcaaaggttgttcaaatgttttaatcacgcctat-cattacagaagactagaagcatgaagtaacggctaattcaaaagaatttgaaggcattag 168  Q
    ||||||||||||||||||||  | ||||||| || |||  |||| ||||||||| |||   ||||| |||  ||| ||  |||||||||||||||||| |    
T  2267269 aagcttcaaaggttgttcaatggatttaatctcgtctaagcattgcagaagactggaaaagtgaagcaacaactagtttgaaagaatttgaaggcattgg 2267170  T
Q  169 atgcttactctttggagaacgttggaaaaggacaattgtacgaagtgtacaacaactatctccactactctgtttt 244  Q
    ||| ||  ||||   ||| |||||  ||||  |||||||| |||||||||||| |||| |||||||||| ||||||    
T  2267169 atgtttgttcttcaaagagcgttgtcaaagtgcaattgtatgaagtgtacaaccactacctccactactatgtttt 2267094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 195 - 238
Target Start/End: Original strand, 16235322 - 16235365
Alignment:
Q  195 aaaggacaattgtacgaagtgtacaacaactatctccactactc 238  Q
    |||| ||||||||||||||||||||||||||| |||||||||||    
T  16235322 aaagtacaattgtacgaagtgtacaacaactacctccactactc 16235365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 149 - 244
Target Start/End: Original strand, 22427337 - 22427432
Alignment:
Q  149 aaagaatttgaaggcattagatgcttactctttggagaacgttggaaaaggacaattgtacgaagtgtacaacaactatctccactactctgtttt 244  Q
    |||| ||||||||||||| |||||||  ||||   | | |||||  |||| |||||||||||||||||||||| |||| |||||||||| ||||||    
T  22427337 aaaggatttgaaggcattggatgcttgttcttaaaaaagcgttgacaaagtacaattgtacgaagtgtacaaccactacctccactactttgtttt 22427432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 142 - 237
Target Start/End: Original strand, 26702102 - 26702197
Alignment:
Q  142 taattcaaaagaatttgaaggcattagatgcttactctttggagaacgttggaaaaggacaattgtacgaagtgtacaacaactatctccactact 237  Q
    ||||||||| ||| ||||||||||| ||| ||| || |||| |||  | ||  |||| |||||||||||||||||||||| |||| ||||||||||    
T  26702102 taattcaaatgaagttgaaggcattggattcttgctttttgaagagtgatgacaaagtacaattgtacgaagtgtacaaccactacctccactact 26702197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 149 - 243
Target Start/End: Complemental strand, 10757521 - 10757427
Alignment:
Q  149 aaagaatttgaaggcattagatgcttactctttggagaacgttggaaaaggacaattgtacgaagtgtacaacaactatctccactactctgttt 243  Q
    |||| ||||||| ||||| |||| ||  |||||| ||| | |||  |||| |||||||||||||||||||||| ||||||| |||||||| ||||    
T  10757521 aaaggatttgaaagcattggatgattgttctttgaagagcattgacaaagtacaattgtacgaagtgtacaaccactatcttcactactcagttt 10757427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 195 - 244
Target Start/End: Complemental strand, 2268585 - 2268536
Alignment:
Q  195 aaaggacaattgtacgaagtgtacaacaactatctccactactctgtttt 244  Q
    |||| |||||||||||||||||||||| |||| ||| |||||||||||||    
T  2268585 aaagtacaattgtacgaagtgtacaaccactacctcgactactctgtttt 2268536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 203 - 244
Target Start/End: Complemental strand, 19215658 - 19215617
Alignment:
Q  203 attgtacgaagtgtacaacaactatctccactactctgtttt 244  Q
    ||||||||||||||||||| ||||||| ||||||||||||||    
T  19215658 attgtacgaagtgtacaaccactatctgcactactctgtttt 19215617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 200 - 237
Target Start/End: Complemental strand, 30893141 - 30893104
Alignment:
Q  200 acaattgtacgaagtgtacaacaactatctccactact 237  Q
    |||||||||||||||||||||| |||||||||||||||    
T  30893141 acaattgtacgaagtgtacaaccactatctccactact 30893104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 204 - 244
Target Start/End: Complemental strand, 10251031 - 10250991
Alignment:
Q  204 ttgtacgaagtgtacaacaactatctccactactctgtttt 244  Q
    |||||||||||||||||| | ||||||||||||||||||||    
T  10251031 ttgtacgaagtgtacaaccattatctccactactctgtttt 10250991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 204 - 244
Target Start/End: Original strand, 14263486 - 14263526
Alignment:
Q  204 ttgtacgaagtgtacaacaactatctccactactctgtttt 244  Q
    |||||||||||||||||| |||| |||||||||||||||||    
T  14263486 ttgtacgaagtgtacaaccactacctccactactctgtttt 14263526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 204 - 244
Target Start/End: Complemental strand, 23024833 - 23024793
Alignment:
Q  204 ttgtacgaagtgtacaacaactatctccactactctgtttt 244  Q
    |||||||||||||||||| ||||||| ||||||||||||||    
T  23024833 ttgtacgaagtgtacaaccactatctgcactactctgtttt 23024793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 204 - 244
Target Start/End: Complemental strand, 35040211 - 35040171
Alignment:
Q  204 ttgtacgaagtgtacaacaactatctccactactctgtttt 244  Q
    |||||||||||||||||| |||| |||||||||||||||||    
T  35040211 ttgtacgaagtgtacaaccactacctccactactctgtttt 35040171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 109 - 244
Target Start/End: Original strand, 22464749 - 22464884
Alignment:
Q  109 cattacagaagactagaagcatgaagtaacggctaattcaaaagaatttgaaggcattagatgcttactctttggagaacgttggaaaaggacaattgta 208  Q
    |||| ||||||||| |||   ||||| |||| ||||||  |||  ||||||||||||| |||||||  ||||   ||| |||||  |||| |||| ||||    
T  22464749 cattgcagaagactggaaaagtgaagcaacgactaatttgaaatgatttgaaggcattggatgcttgttcttcaaagagcgttgacaaagtacaagtgta 22464848  T
Q  209 cgaagtgtacaacaactatctccactactctgtttt 244  Q
    ||||||||||| | |||| |||||||||||| ||||    
T  22464849 cgaagtgtacatccactacctccactactctatttt 22464884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 200 - 242
Target Start/End: Complemental strand, 7309868 - 7309826
Alignment:
Q  200 acaattgtacgaagtgtacaacaactatctccactactctgtt 242  Q
    |||||||||||||||||||||| |||| ||||| |||||||||    
T  7309868 acaattgtacgaagtgtacaaccactacctccaatactctgtt 7309826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 206 - 244
Target Start/End: Complemental strand, 17371085 - 17371047
Alignment:
Q  206 gtacgaagtgtacaacaactatctccactactctgtttt 244  Q
    |||||||||||||||| |||| |||||||||||||||||    
T  17371085 gtacgaagtgtacaaccactacctccactactctgtttt 17371047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 204 - 246
Target Start/End: Original strand, 21204958 - 21205000
Alignment:
Q  204 ttgtacgaagtgtacaacaactatctccactactctgttttgt 246  Q
    |||||||||||||||||| ||||  ||||||||||||||||||    
T  21204958 ttgtacgaagtgtacaaccactacttccactactctgttttgt 21205000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 195 - 244
Target Start/End: Original strand, 23036553 - 23036602
Alignment:
Q  195 aaaggacaattgtacgaagtgtacaacaactatctccactactctgtttt 244  Q
    |||| |||||||||||||||||||||| |||| |||| ||||| ||||||    
T  23036553 aaagaacaattgtacgaagtgtacaaccactacctcctctactttgtttt 23036602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 204 - 240
Target Start/End: Original strand, 2327475 - 2327511
Alignment:
Q  204 ttgtacgaagtgtacaacaactatctccactactctg 240  Q
    |||||||||||||||||| |||| |||||||||||||    
T  2327475 ttgtacgaagtgtacaaccactacctccactactctg 2327511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 204 - 244
Target Start/End: Original strand, 21135195 - 21135235
Alignment:
Q  204 ttgtacgaagtgtacaacaactatctccactactctgtttt 244  Q
    |||||||||||||||||| ||||  ||||||||||||||||    
T  21135195 ttgtacgaagtgtacaaccactaaatccactactctgtttt 21135235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 130; Significance: 2e-67; HSPs: 50)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 23 - 256
Target Start/End: Original strand, 41114660 - 41114893
Alignment:
Q  23 tctaaagatcatcaggagctgaagatcatcagaaactgaaagaattgaagcttcaaaggttgttcaaatgttttaatcacgcctatcattacagaagact 122  Q
    |||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||| || |||||||| |||| ||||| || ||||||    
T  41114660 tctaaagatcatcaggagctgaagatcatcagaagctgagagaattgaagcttcaaaggttgttcaattgatttaatcaagcctgtcattgcaaaagact 41114759  T
Q  123 agaagcatgaagtaacggctaattcaaaagaatttgaaggcattagatgcttactctttggagaacgttggaaaaggacaattgtacgaagtgtacaaca 222  Q
    ||||| |||||| |||||||| |||||| ||||||||||||||| |||||||  |  |||||||  |||| |||||||||||||||||  |||||||||     
T  41114760 agaagaatgaagcaacggctatttcaaatgaatttgaaggcattggatgcttttttgttggagagagttgaaaaaggacaattgtacgtcgtgtacaacc 41114859  T
Q  223 actatctccactactctgttttgtgtatgcaata 256  Q
    ||||| ||||| |||||| |||||||||||||||    
T  41114860 actatttccaccactctgatttgtgtatgcaata 41114893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 30 - 275
Target Start/End: Original strand, 17787950 - 17788187
Alignment:
Q  30 atcatcaggagctgaagatcatcagaaactgaaagaattgaagcttcaaaggttgttcaaatgttttaatcacgcctatcattacagaagactagaagca 129  Q
    ||||||||||| |||||||||| |||| |||||||||||||||||||||||| |||||||||| ||||||||||| ||||||| ||||||||||||||||    
T  17787950 atcatcaggagttgaagatcattagaagctgaaagaattgaagcttcaaaggctgttcaaatgatttaatcacgcttatcattgcagaagactagaagca 17788049  T
Q  130 tgaagtaacggctaattcaaaagaatttgaaggcattagatgcttactctttggagaacgttgg-aaaaggacaattgtacgaagtgtacaacaactatc 228  Q
           | | ||| |||||| |||||| ||||||||||||||||| ||||||||||||||||| |||||||||||||||||| ||||||||| ||||||    
T  17788050 -------atgactatttcaaaggaatttaaaggcattagatgcttattctttggagaacgttggaaaaaggacaattgtacgatgtgtacaaccactatc 17788142  T
Q  229 tccactactctgttttgtgtatgcaatagtacaagagaaacagttgt 275  Q
    ||||||||||| |||| ||| |||  ||||||||||  |||||||||    
T  17788143 tccactactctattttttgtctgc--tagtacaagaacaacagttgt 17788187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 44 - 248
Target Start/End: Complemental strand, 11915900 - 11915696
Alignment:
Q  44 aagatcatcagaaactgaaagaattgaagcttcaaaggttgttcaaatgttttaatcacgcctatcattacagaagactagaagcatgaagtaacggcta 143  Q
    ||||||||||||| |||| ||||||||||||||||||| || ||||||| |||||||||||| |||||| |||||||||| |||  ||||| |||| |||    
T  11915900 aagatcatcagaagctgagagaattgaagcttcaaaggctgctcaaatgatttaatcacgcccatcattgcagaagactaaaagagtgaagcaacgacta 11915801  T
Q  144 attcaaaagaatttgaaggcattagatgcttactctttggagaacgttggaaaaggacaattgtacgaagtgtacaacaactatctccactactctgttt 243  Q
     |||||| | ||||||||||||| |||||||| |||||| ||| |||||||||||||||||||||| ||||||||||| ||   ||||||||||||||||    
T  11915800 tttcaaatggatttgaaggcattggatgcttattctttgaagagcgttggaaaaggacaattgtacaaagtgtacaaccaccgcctccactactctgttt 11915701  T
Q  244 tgtgt 248  Q
    |||||    
T  11915700 tgtgt 11915696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 22 - 264
Target Start/End: Complemental strand, 17540615 - 17540375
Alignment:
Q  22 ttctaaagatcatcaggagctgaagatcatcagaaactgaaagaattgaagcttcaaaggttgttcaaatgttttaatcacgcctatcattacagaagac 121  Q
    |||| |||||||| |||||||||||||||||||||  |||||||||||||||||||  || |||||||||| ||||||| ||||||||||| || |||||    
T  17540615 ttctgaagatcattaggagctgaagatcatcagaagttgaaagaattgaagcttca--ggctgttcaaatgatttaatctcgcctatcattgcaaaagac 17540518  T
Q  122 tagaagcatgaagtaacggctaattcaaaagaatttgaaggcattagatgcttactctttggagaacgttggaaaaggacaattgtacgaagtgtacaac 221  Q
    |  ||| |||||| |||  |||||||| | | || ||||| || | ||||| || || |||||||  |||| ||||||||||||||||||||||||||||    
T  17540517 tgaaagaatgaagcaacaactaattcagatggatgtgaagccagtggatgcctattcgttggagagtgttgaaaaaggacaattgtacgaagtgtacaac 17540418  T
Q  222 aactatctccactactctgttttgtgtatgcaatagtacaaga 264  Q
     | |||||||||||||||||||||||| |||||||| ||||||    
T  17540417 cattatctccactactctgttttgtgtctgcaataggacaaga 17540375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 94 - 275
Target Start/End: Complemental strand, 11901337 - 11901157
Alignment:
Q  94 tttaatcacgcctatcattacagaagactagaagcatgaagtaacggctaattcaaaagaatttgaaggcattagatgcttactctttggagaacgttgg 193  Q
    |||||| |||||| ||||| ||||||||||||| ||||||| |||| ||||||||||||| |||||||||||| |||||||| ||| ||||||||||| |    
T  11901337 tttaataacgcctgtcattgcagaagactagaaacatgaagcaacgactaattcaaaagattttgaaggcattggatgcttattctctggagaacgttag 11901238  T
Q  194 aaaaggacaattgtacgaagtgtacaacaactatctccactactctgt-tttgtgtatgcaatagtacaagagaaacagttgt 275  Q
    |||||||||||||||||||||||||||  ||||||| ||||| ||||| ||||||| |||  ||||||||||  |||||||||    
T  11901237 aaaaggacaattgtacgaagtgtacaatcactatctacactaatctgtatttgtgtctgc--tagtacaagaacaacagttgt 11901157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 30 - 243
Target Start/End: Complemental strand, 6641898 - 6641685
Alignment:
Q  30 atcatcaggagctgaagatcatcagaaactgaaagaattgaagcttcaaaggttgttcaaatgttttaatcacgcctatcattacagaagactagaagca 129  Q
    |||| ||| |||||||  |||||||||  ||| ||| || ||||||||||||||||||||| | |||||||| ||||| ||||  ||||||  |||||      
T  6641898 atcaccagaagctgaatttcatcagaagatgagagatttaaagcttcaaaggttgttcaaaggatttaatcatgcctagcattgtagaagatcagaagag 6641799  T
Q  130 tgaagtaacggctaattcaaaagaatttgaaggcattagatgcttactctttggagaacgttggaaaaggacaattgtacgaagtgtacaacaactatct 229  Q
    ||||  ||||||||||||||||| ||||||||||||| ||| |||  |||||| ||| |||||  |||| |||||||||||||||||||||| |||| ||    
T  6641798 tgaaacaacggctaattcaaaaggatttgaaggcatttgatacttgttctttgaagagcgttgacaaagtacaattgtacgaagtgtacaaccactacct 6641699  T
Q  230 ccactactctgttt 243  Q
    ||||||||||||||    
T  6641698 ccactactctgttt 6641685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 39 - 243
Target Start/End: Complemental strand, 40846305 - 40846100
Alignment:
Q  39 agctgaagatcatcagaaactgaaagaattgaagcttcaaa-ggttgttcaaatgttttaatcacgcctatcattacagaagactagaagcatgaagtaa 137  Q
    |||||||| |||||||||  ||| ||| || |||||||||| || |||||||  | |||||||||||||| |||| |||||||| || |   ||||| ||    
T  40846305 agctgaagttcatcagaagatgagagacttaaagcttcaaaaggctgttcaatggatttaatcacgcctagcattgcagaagaccaggaaagtgaagcaa 40846206  T
Q  138 cggctaattcaaaagaatttgaaggcattagatgcttactctttggagaacgttggaaaaggacaattgtacgaagtgtacaacaactatctccactact 237  Q
    || |||||||||| ||| ||||| ||||| ||||||| || |||| ||| |||||  |||| |||||||||||||||||||||| |||||||||||||||    
T  40846205 cgactaattcaaatgaagttgaaagcattggatgcttgctttttgaagagcgttgacaaagtacaattgtacgaagtgtacaaccactatctccactact 40846106  T
Q  238 ctgttt 243  Q
    | ||||    
T  40846105 cagttt 40846100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 98 - 264
Target Start/End: Original strand, 10661132 - 10661298
Alignment:
Q  98 atcacgcctatcattacagaagactagaagcatgaagtaacggctaattcaaaagaattt-gaaggcattagatgcttactctttggagaacgttggaaa 196  Q
    |||| |||||||||| |||||   ||||||| ||||| |||| |||| ||| | || ||| |||||||||  ||||||| | ||||||||| ||||||||    
T  10661132 atcaagcctatcattgcagaaatatagaagcctgaagcaacgactaaatcagaggatttttgaaggcattgaatgcttattatttggagaatgttggaaa 10661231  T
Q  197 aggacaattgtacgaagtgtacaacaactatctccactactctgttttgtgtatgcaatagtacaaga 264  Q
    |||||||| |||| || |||||||| |||||||||||||||||||||||||| |||||||||||||||    
T  10661232 aggacaatagtac-aattgtacaaccactatctccactactctgttttgtgtctgcaatagtacaaga 10661298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 98 - 264
Target Start/End: Original strand, 10875277 - 10875443
Alignment:
Q  98 atcacgcctatcattacagaagactagaagcatgaagtaacggctaattcaaaagaattt-gaaggcattagatgcttactctttggagaacgttggaaa 196  Q
    |||| |||||||||| |||||   ||||||| ||||| |||| |||| ||| | || ||| |||||||||  ||||||| | ||||||||| ||||||||    
T  10875277 atcaagcctatcattgcagaaatatagaagcctgaagcaacgactaaatcagaggatttttgaaggcattgaatgcttattatttggagaatgttggaaa 10875376  T
Q  197 aggacaattgtacgaagtgtacaacaactatctccactactctgttttgtgtatgcaatagtacaaga 264  Q
    |||||||| |||| || |||||||| |||||||||||||||||||||||||| |||||||||||||||    
T  10875377 aggacaatagtac-aattgtacaaccactatctccactactctgttttgtgtctgcaatagtacaaga 10875443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 27 - 243
Target Start/End: Complemental strand, 55380508 - 55380291
Alignment:
Q  27 aagatcatcaggagctgaagatcatcagaaactgaaagaattgaagcttcaaa-ggttgttcaaatgttttaatcacgcctatcattacagaagactaga 125  Q
    ||||||||||| |||||||| |||| || |  || |||| || |||||||||| || |||||||  | |||||||| ||||| |||| |||||||| |||    
T  55380508 aagatcatcagaagctgaagttcattaggagatgcaagacttaaagcttcaaaaggctgttcaatggatttaatcatgcctaacattgcagaagaccaga 55380409  T
Q  126 agcatgaagtaacggctaattcaaaagaatttgaaggcattagatgcttactctttggagaacgttggaaaaggacaattgtacgaagtgtacaacaact 225  Q
    ||  ||||| |||  ||| ||  |||| ||||||| ||||| |||||||  |||||| ||| |||||  | || |||||||||||||||||||||| |||    
T  55380408 agagtgaagcaacaactattttgaaaggatttgaaagcattggatgcttgttctttgaagagcgttgacatagtacaattgtacgaagtgtacaaccact 55380309  T
Q  226 atctccactactctgttt 243  Q
    ||||||||||||| ||||    
T  55380308 atctccactactcagttt 55380291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 24 - 245
Target Start/End: Complemental strand, 45833615 - 45833393
Alignment:
Q  24 ctaaagatcatcaggagctgaagatcatcagaaactgaaagaattgaagcttcaaaggttgttcaaatgttttaatcacgcctat-cattacagaagact 122  Q
    |||||||||| ||| ||||  || ||||||| |  || |||| || ||||||||||||||||||||  | ||||||| || |||  |||| |||||||||    
T  45833615 ctaaagatcaccagaagctctagttcatcaggagatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctaagcattgcagaagact 45833516  T
Q  123 agaagcatgaagtaacggctaattcaaaagaatttgaaggcattagatgcttactctttggagaacgttggaaaaggacaattgtacgaagtgtacaaca 222  Q
     ||||  | ||| |||  ||| ||  |||| ||||||| ||||| |||||||  |||||  ||| |||||  |||| ||||||||||||||||||||||     
T  45833515 ggaagagttaagcaacttctattttgaaagtatttgaatgcattggatgctttttcttttaagagcgttgacaaagtacaattgtacgaagtgtacaacc 45833416  T
Q  223 actatctccactactctgttttg 245  Q
    |||||||||||||||||||||||    
T  45833415 actatctccactactctgttttg 45833393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 200 - 264
Target Start/End: Original strand, 8685510 - 8685574
Alignment:
Q  200 acaattgtacgaagtgtacaacaactatctccactactctgttttgtgtatgcaatagtacaaga 264  Q
    |||||||||||||||||||||| |||||||||||||||||| ||||||| |||||||| ||||||    
T  8685510 acaattgtacgaagtgtacaaccactatctccactactctgatttgtgtctgcaataggacaaga 8685574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 152 - 264
Target Start/End: Complemental strand, 10249903 - 10249792
Alignment:
Q  152 gaatttgaaggcattagatgcttactctttggagaacgttggaaaaggacaattgtacgaagtgtacaacaactatctccactactctgttttgtgtatg 251  Q
    |||||||||| |||| ||||||||  | ||| ||||| ||||||||||||||| |||| || |||||||| ||  |||||||||||||||||| ||| ||    
T  10249903 gaatttgaagtcattggatgcttatcccttgaagaacattggaaaaggacaatagtac-aattgtacaaccaccttctccactactctgttttctgtctg 10249805  T
Q  252 caatagtacaaga 264  Q
    |||||||||||||    
T  10249804 caatagtacaaga 10249792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 148 - 244
Target Start/End: Original strand, 14604922 - 14605018
Alignment:
Q  148 aaaagaatttgaaggcattagatgcttactctttggagaacgttggaaaaggacaattgtacgaagtgtacaacaactatctccactactctgtttt 244  Q
    ||||| ||||||| ||||| |||||||  |||||| ||| |||||  |||| |||||||||||||||||||||| |||| |||||||||||||||||    
T  14604922 aaaaggatttgaaagcattggatgcttgttctttgaagagcgttgacaaagtacaattgtacgaagtgtacaaccactacctccactactctgtttt 14605018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 149 - 243
Target Start/End: Complemental strand, 12601196 - 12601102
Alignment:
Q  149 aaagaatttgaaggcattagatgcttactctttggagaacgttggaaaaggacaattgtacgaagtgtacaacaactatctccactactctgttt 243  Q
    |||| ||||||||||||| |||||||  |||||| ||| |||||  | || |||||||||||||||||||||| |||||||||||||||| ||||    
T  12601196 aaaggatttgaaggcattggatgcttgttctttgaagagcgttgacatagtacaattgtacgaagtgtacaaccactatctccactactcagttt 12601102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 27 - 244
Target Start/End: Original strand, 37435428 - 37435646
Alignment:
Q  27 aagatcatcaggagctgaagatcatcagaaactgaaagaattgaagcttcaaaggttgttcaaatgttttaatcacg-cctatcattacagaagactaga 125  Q
    ||||||| ||| |||||||| ||||||| |  || |||| || ||||||||||||||||||||  | ||||||| || || | |||| ||||||| | ||    
T  37435428 aagatcaccagaagctgaagttcatcaggagatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtccaagcattgcagaagattgga 37435527  T
Q  126 agcatgaagtaacggctaattcaaaagaatttgaaggcattagatgcttactctttggagaacgttggaaaaggacaattgtacgaagtgtacaacaact 225  Q
    ||  ||||| |||| ||| ||  |||| ||||||||||||| |||||||  ||||   ||| |||||  | || || ||||||||||||||||||| |||    
T  37435528 agagtgaagcaacgactattttgaaaggatttgaaggcattggatgcttgttcttcaaagagcgttgacatagtactattgtacgaagtgtacaaccact 37435627  T
Q  226 atctccactactctgtttt 244  Q
    | |||||||||| ||||||    
T  37435628 acctccactactttgtttt 37435646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 149 - 243
Target Start/End: Original strand, 37985628 - 37985722
Alignment:
Q  149 aaagaatttgaaggcattagatgcttactctttggagaacgttggaaaaggacaattgtacgaagtgtacaacaactatctccactactctgttt 243  Q
    |||| ||||||||||||| |||||||  |||||| ||| |||||  | || |||||||||||||||||||||| |||||||||||||||| ||||    
T  37985628 aaaggatttgaaggcattggatgcttgttctttgaagagcgttgacatagtacaattgtacgaagtgtacaaccactatctccactactcagttt 37985722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 27 - 112
Target Start/End: Complemental strand, 22089805 - 22089721
Alignment:
Q  27 aagatcatcaggagctgaagatcatcagaaactgaaagaattgaagcttcaaaggttgttcaaatgttttaatcacgcctatcatt 112  Q
    ||||||| ||| |||| |||||||||||||  |||||||||| ||||||||||||||||||||| | |||||||||||||| ||||    
T  22089805 aagatcaccagaagctaaagatcatcagaagatgaaagaatt-aagcttcaaaggttgttcaaaggatttaatcacgcctaacatt 22089721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 149 - 244
Target Start/End: Complemental strand, 19884797 - 19884702
Alignment:
Q  149 aaagaatttgaaggcattagatgcttactctttggagaacgttggaaaaggacaattgtacgaagtgtacaacaactatctccactactctgtttt 244  Q
    |||| ||||||||||||| |||||||  ||||   ||| |||||  |||| |||||||||||||||||||||| ||||||||||||| ||||||||    
T  19884797 aaaggatttgaaggcattggatgcttgttcttcaaagagcgttgacaaagtacaattgtacgaagtgtacaaccactatctccactaatctgtttt 19884702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 70 - 244
Target Start/End: Original strand, 22675456 - 22675631
Alignment:
Q  70 aagcttcaaaggttgttcaaatgttttaatcacgcctat-cattacagaagactagaagcatgaagtaacggctaattcaaaagaatttgaaggcattag 168  Q
    |||||||||||| |||||||  | ||||||| || |||  |||| |||||||||||||   ||||| |||| ||| ||  |||| ||||||||||||| |    
T  22675456 aagcttcaaaggctgttcaatggatttaatctcgtctaagcattgcagaagactagaaaagtgaagcaacgactagtttgaaaggatttgaaggcatttg 22675555  T
Q  169 atgcttactctttggagaacgttggaaaaggacaattgtacgaagtgtacaacaactatctccactactctgtttt 244  Q
    ||||||  ||||   ||| |||||  |||| |||||||||| ||||||||||| |||| ||||||||||| |||||    
T  22675556 atgcttgttcttcaaagagcgttgacaaagtacaattgtacaaagtgtacaaccactacctccactactcagtttt 22675631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 149 - 243
Target Start/End: Complemental strand, 9141007 - 9140913
Alignment:
Q  149 aaagaatttgaaggcattagatgcttactctttggagaacgttggaaaaggacaattgtacgaagtgtacaacaactatctccactactctgttt 243  Q
    |||| ||||||||||||| |||||||  |||||| ||| |||||  | || |||||||||||||||||||||| ||||||| |||||||| ||||    
T  9141007 aaaggatttgaaggcattggatgcttgttctttgaagagcgttgacatagtacaattgtacgaagtgtacaaccactatcttcactactcagttt 9140913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 109 - 238
Target Start/End: Original strand, 29680520 - 29680649
Alignment:
Q  109 cattacagaagactagaagcatgaagtaacggctaattcaaaagaatttgaaggcattagatgcttactctttggagaacgttggaaaaggacaattgta 208  Q
    |||| ||||||||| ||||  ||||| |||| ||| ||  |||| ||||||| ||||| |||||||  |||||| ||| |||||  |||| |||||||||    
T  29680520 cattgcagaagactggaagagtgaagcaacgactattttgaaaggatttgaaagcattggatgcttgttctttgaagagcgttgacaaagtacaattgta 29680619  T
Q  209 cgaagtgtacaacaactatctccactactc 238  Q
    ||||||||||||  | ||||||||||||||    
T  29680620 cgaagtgtacaatcattatctccactactc 29680649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 149 - 243
Target Start/End: Complemental strand, 3395685 - 3395591
Alignment:
Q  149 aaagaatttgaaggcattagatgcttactctttggagaacgttggaaaaggacaattgtacgaagtgtacaacaactatctccactactctgttt 243  Q
    |||| ||||||| ||||| ||||||   |||||| ||| |||||  | || |||||||||||||||||||||| |||||||||||||||| ||||    
T  3395685 aaaggatttgaaagcattggatgctagttctttgaagagcgttgacatagtacaattgtacgaagtgtacaaccactatctccactactcagttt 3395591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 109 - 243
Target Start/End: Complemental strand, 19666507 - 19666373
Alignment:
Q  109 cattacagaagactagaagcatgaagtaacggctaattcaaaagaatttgaaggcattagatgcttactctttggagaacgttggaaaaggacaattgta 208  Q
    |||| ||||||||| ||||  ||||| |||| ||| ||  |||| ||||||| |||||  || |||  |||||| |||  ||||  |||| |||||||||    
T  19666507 cattgcagaagactggaagagtgaagcaacgactattttgaaaggatttgaaagcattgaatacttgttctttgaagagagttgacaaagtacaattgta 19666408  T
Q  209 cgaagtgtacaacaactatctccactactctgttt 243  Q
    ||||||||||||| |||||||||||||||| ||||    
T  19666407 cgaagtgtacaaccactatctccactactcagttt 19666373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 31 - 235
Target Start/End: Original strand, 19620958 - 19621163
Alignment:
Q  31 tcatcaggagctgaagatcatcagaaactgaaagaattgaagcttcaaaggttgttcaaatgttttaatcacg-cctatcattacagaagactagaagca 129  Q
    ||||||| |||||||| ||||||| |  || |||| || ||||||||||||||||||||  | || |||| || || | |||| || ||||| |||        
T  19620958 tcatcagaagctgaagttcatcaggagatgcaagagttaaagcttcaaaggttgttcaatggattcaatctcgtccaagcattgcaaaagaccagagaag 19621057  T
Q  130 tgaagtaacggctaattcaaaagaatttgaaggcattagatgcttactctttggagaacgttggaaaaggacaattgtacgaagtgtacaacaactatct 229  Q
    ||||| |||| ||| ||  |||| ||||||| ||||| |||||||  ||| || ||| |||||  | || |||||||||||||||||||||| |||||||    
T  19621058 tgaagcaacgactattttgaaaggatttgaaagcattggatgcttgttctatgaagagcgttgacatagtacaattgtacgaagtgtacaaccactatct 19621157  T
Q  230 ccacta 235  Q
    ||||||    
T  19621158 ccacta 19621163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 204 - 244
Target Start/End: Original strand, 3105490 - 3105530
Alignment:
Q  204 ttgtacgaagtgtacaacaactatctccactactctgtttt 244  Q
    |||||||||||||||||| ||||||||||||||||||||||    
T  3105490 ttgtacgaagtgtacaaccactatctccactactctgtttt 3105530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 204 - 244
Target Start/End: Complemental strand, 6517525 - 6517485
Alignment:
Q  204 ttgtacgaagtgtacaacaactatctccactactctgtttt 244  Q
    |||||||||||||||||| ||||||||||||||||||||||    
T  6517525 ttgtacgaagtgtacaaccactatctccactactctgtttt 6517485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 70 - 233
Target Start/End: Complemental strand, 16632615 - 16632451
Alignment:
Q  70 aagcttcaaaggttgttcaaatgttttaatcacgcctat-cattacagaagactagaagcatgaagtaacggctaattcaaaagaatttgaaggcattag 168  Q
    ||||||||||||||||||||  | ||||||| ||  ||  |||| ||||||||| ||||  ||||  |||| ||| ||  |||  ||||||||||||| |    
T  16632615 aagcttcaaaggttgttcaatggatttaatctcgtataagcattgcagaagactggaagagtgaatcaacgactattttgaaaagatttgaaggcattgg 16632516  T
Q  169 atgcttactctttggagaacgttggaaaaggacaattgtacgaagtgtacaacaactatctccac 233  Q
    || |||  |||||| ||| |||||  |||| |||||||||||||||||||||| |||| ||||||    
T  16632515 attcttgttctttgaagagcgttgacaaagtacaattgtacgaagtgtacaaccactacctccac 16632451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 27 - 238
Target Start/End: Complemental strand, 56034792 - 56034580
Alignment:
Q  27 aagatcatcaggagctgaagatcatcagaaactgaaagaattgaagcttcaaaggttgttcaaatgttttaatcacg-cctatcattacagaagactaga 125  Q
    ||||||| ||| |||||||| |||||||||  || |||| || |||||||||||  |||||||  | ||||||| || || | |||| ||||||||| ||    
T  56034792 aagatcaccagaagctgaagttcatcagaagatgcaagacttaaagcttcaaagactgttcaatggatttaatctcgtccaagcattgcagaagactgga 56034693  T
Q  126 agcatgaagtaacggctaattcaaaagaatttgaaggcattagatgcttactctttggagaacgttggaaaaggacaattgtacgaagtgtacaacaact 225  Q
    ||  ||||| |||| ||| ||  ||| |||||||||||||| |||| ||  ||||   ||| |||||  |||| ||||||||   || |||||||| |||    
T  56034692 agagtgaagcaacgactattttgaaataatttgaaggcattggatgtttgttcttcaaagagcgttgacaaagtacaattgtctaaaatgtacaactact 56034593  T
Q  226 atctccactactc 238  Q
    |||||||||||||    
T  56034592 atctccactactc 56034580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 149 - 244
Target Start/End: Complemental strand, 29121465 - 29121370
Alignment:
Q  149 aaagaatttgaaggcattagatgcttactctttggagaacgttggaaaaggacaattgtacgaagtgtacaacaactatctccactactctgtttt 244  Q
    |||| ||||||||||| | |||||||  |||||  ||| |||||  |||| ||  |||||||||||||||||| |||| |||||||||||||||||    
T  29121465 aaaggatttgaaggcactggatgcttgttctttaaagagcgttgacaaagtacgtttgtacgaagtgtacaaccactacctccactactctgtttt 29121370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 130 - 244
Target Start/End: Complemental strand, 17247358 - 17247244
Alignment:
Q  130 tgaagtaacggctaattcaaaagaatttgaaggcattagatgcttactctttggagaacgttggaaaaggacaattgtacgaagtgtacaacaactatct 229  Q
    ||||| |||| ||||||  |||| |||||||||||||  ||| ||  ||||   ||||| |||  |||| |||||||||||||||||||||| |||  ||    
T  17247358 tgaagcaacgactaatttgaaaggatttgaaggcattgaatgtttgttcttcaaagaacattgacaaagtacaattgtacgaagtgtacaaccactgcct 17247259  T
Q  230 ccactactctgtttt 244  Q
    |||||||||||||||    
T  17247258 ccactactctgtttt 17247244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 25 - 243
Target Start/End: Complemental strand, 23750740 - 23750523
Alignment:
Q  25 taaagatcatcaggagctgaagatcatcagaaactgaaagaattgaagcttcaaa-ggttgttcaaatgttttaatcacgcctatcattacagaagacta 123  Q
    ||||||| | ||| |||||||| ||||||| |  || |||| || |||||||||| ||||||||||  | |||||||||||||| || | |||||||| |    
T  23750740 taaagataaccagaagctgaagttcatcaggagatgcaagacttaaagcttcaaaaggttgttcaatggatttaatcacgcctagcactgcagaagacca 23750641  T
Q  124 gaagcatgaagtaacggctaattcaaaagaatttgaaggcattagatgcttactctt-tggagaacgttggaaaaggacaattgtacgaagtgtacaaca 222  Q
    | ||  ||||| |||| ||  |||||| ||| || |||||||| |||||||  | || || ||  |||    |||| ||||||||||||||||||||||     
T  23750640 ggagagtgaagcaacgactgcttcaaatgaagttaaaggcatttgatgcttgtttttatgaagtgcgtc---aaagtacaattgtacgaagtgtacaacc 23750544  T
Q  223 actatctccactactctgttt 243  Q
    | |||||||||||||| ||||    
T  23750543 attatctccactactcagttt 23750523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 195 - 244
Target Start/End: Complemental strand, 10072984 - 10072935
Alignment:
Q  195 aaaggacaattgtacgaagtgtacaacaactatctccactactctgtttt 244  Q
    |||| |||| ||||||||||||||||| ||||||||||||||| ||||||    
T  10072984 aaagtacaaatgtacgaagtgtacaaccactatctccactactatgtttt 10072935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 202 - 243
Target Start/End: Original strand, 12811244 - 12811285
Alignment:
Q  202 aattgtacgaagtgtacaacaactatctccactactctgttt 243  Q
    |||||||||||||||||||| |||||||||||||||| ||||    
T  12811244 aattgtacgaagtgtacaaccactatctccactactcagttt 12811285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 204 - 244
Target Start/End: Original strand, 17398745 - 17398785
Alignment:
Q  204 ttgtacgaagtgtacaacaactatctccactactctgtttt 244  Q
    |||||||||||||||||| |||| |||||||||||||||||    
T  17398745 ttgtacgaagtgtacaaccactaactccactactctgtttt 17398785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 204 - 244
Target Start/End: Complemental strand, 20977497 - 20977457
Alignment:
Q  204 ttgtacgaagtgtacaacaactatctccactactctgtttt 244  Q
    |||||||||||||||||| ||||||| ||||||||||||||    
T  20977497 ttgtacgaagtgtacaaccactatctgcactactctgtttt 20977457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 204 - 244
Target Start/End: Complemental strand, 54679970 - 54679930
Alignment:
Q  204 ttgtacgaagtgtacaacaactatctccactactctgtttt 244  Q
    |||||||||||||||||| |||| |||||||||||||||||    
T  54679970 ttgtacgaagtgtacaaccactacctccactactctgtttt 54679930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 109 - 244
Target Start/End: Original strand, 13576090 - 13576225
Alignment:
Q  109 cattacagaagactagaagcatgaagtaacggctaattcaaaagaatttgaaggcattagatgcttactctttggagaacgttggaaaaggacaattgta 208  Q
    |||| ||||||||| ||||  ||||| |||| ||| ||  |||| |||||||||||||||||||||  ||||   ||| |||||  | || |||| ||||    
T  13576090 cattgcagaagactggaagagtgaagcaacgcctagtttgaaaggatttgaaggcattagatgcttgttcttcaaagagcgttgacatagtacaactgta 13576189  T
Q  209 cgaagtgtacaacaactatctccactactctgtttt 244  Q
    ||||||||| ||| ||||  |||||| |||||||||    
T  13576190 cgaagtgtaaaaccactacatccactgctctgtttt 13576225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 204 - 242
Target Start/End: Complemental strand, 1672429 - 1672391
Alignment:
Q  204 ttgtacgaagtgtacaacaactatctccactactctgtt 242  Q
    |||||||||||||||||| |||| |||||||||||||||    
T  1672429 ttgtacgaagtgtacaaccactacctccactactctgtt 1672391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 204 - 242
Target Start/End: Complemental strand, 1674904 - 1674866
Alignment:
Q  204 ttgtacgaagtgtacaacaactatctccactactctgtt 242  Q
    |||||||||||||||||| |||| |||||||||||||||    
T  1674904 ttgtacgaagtgtacaaccactacctccactactctgtt 1674866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 204 - 246
Target Start/End: Complemental strand, 8105677 - 8105635
Alignment:
Q  204 ttgtacgaagtgtacaacaactatctccactactctgttttgt 246  Q
    ||||||||| |||||||| |||| |||||||||||||||||||    
T  8105677 ttgtacgaaatgtacaaccactacctccactactctgttttgt 8105635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 149 - 243
Target Start/End: Original strand, 14904372 - 14904466
Alignment:
Q  149 aaagaatttgaaggcattagatgcttactctttggagaacgttggaaaaggacaattgtacgaagtgtacaacaactatctccactactctgttt 243  Q
    |||| |||||||| |||| |||||||| |||||| ||| |||||  | || |||||||||||||||  ||||| | ||||||||| |||| ||||    
T  14904372 aaaggatttgaagacattggatgcttattctttgaagagcgttgacatagtacaattgtacgaagtaaacaaccattatctccaccactcagttt 14904466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 204 - 246
Target Start/End: Original strand, 25651175 - 25651217
Alignment:
Q  204 ttgtacgaagtgtacaacaactatctccactactctgttttgt 246  Q
    |||||| ||||||||||| |||| |||||||||||||||||||    
T  25651175 ttgtacaaagtgtacaaccactacctccactactctgttttgt 25651217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 204 - 246
Target Start/End: Original strand, 56533133 - 56533175
Alignment:
Q  204 ttgtacgaagtgtacaacaactatctccactactctgttttgt 246  Q
    |||||||||||||||||| ||||  ||||||||||||||||||    
T  56533133 ttgtacgaagtgtacaaccactacttccactactctgttttgt 56533175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 204 - 244
Target Start/End: Complemental strand, 10692891 - 10692851
Alignment:
Q  204 ttgtacgaagtgtacaacaactatctccactactctgtttt 244  Q
    ||||| |||||||||||| |||| |||||||||||||||||    
T  10692891 ttgtatgaagtgtacaaccactacctccactactctgtttt 10692851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 204 - 244
Target Start/End: Complemental strand, 10906657 - 10906617
Alignment:
Q  204 ttgtacgaagtgtacaacaactatctccactactctgtttt 244  Q
    ||||| |||||||||||| |||| |||||||||||||||||    
T  10906657 ttgtatgaagtgtacaaccactacctccactactctgtttt 10906617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 204 - 244
Target Start/End: Original strand, 14154065 - 14154105
Alignment:
Q  204 ttgtacgaagtgtacaacaactatctccactactctgtttt 244  Q
    |||||||||||||||||| ||  ||||||||||||||||||    
T  14154065 ttgtacgaagtgtacaaccaccttctccactactctgtttt 14154105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 204 - 244
Target Start/End: Complemental strand, 16940056 - 16940016
Alignment:
Q  204 ttgtacgaagtgtacaacaactatctccactactctgtttt 244  Q
    |||||||||||||||||| |||||||||||| || ||||||    
T  16940056 ttgtacgaagtgtacaaccactatctccactgctatgtttt 16940016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 204 - 244
Target Start/End: Complemental strand, 22190886 - 22190846
Alignment:
Q  204 ttgtacgaagtgtacaacaactatctccactactctgtttt 244  Q
    |||||||||||||||||| ||||  ||||||||||||||||    
T  22190886 ttgtacgaagtgtacaaccactacttccactactctgtttt 22190846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 204 - 244
Target Start/End: Original strand, 27188709 - 27188749
Alignment:
Q  204 ttgtacgaagtgtacaacaactatctccactactctgtttt 244  Q
    |||||||||||||| ||| ||||||| ||||||||||||||    
T  27188709 ttgtacgaagtgtataaccactatctgcactactctgtttt 27188749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 124; Significance: 8e-64; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 124; E-Value: 8e-64
Query Start/End: Original strand, 41 - 275
Target Start/End: Original strand, 31686 - 31920
Alignment:
Q  41 ctgaagatcatcagaaactgaaagaattgaagcttcaaaggttgttcaaatgttttaatcacgcctatcattacagaagactagaagcatgaagtaacgg 140  Q
    |||||||||||||||| ||  |||||| ||||||| ||| |||||||||||||||||||||||||||||||| ||||||  ||||||| ||| | |||||    
T  31686 ctgaagatcatcagaagctagaagaatggaagctttaaatgttgttcaaatgttttaatcacgcctatcattgcagaagtatagaagcctgatgcaacgg 31785  T
Q  141 ctaattcaaaagaattt-gaaggcattagatgcttactctttggagaacgttggaaaaggacaattgtacgaagtgtacaacaactatctccactactct 239  Q
    |||||||| | |||||| ||| ||||| |||||||| |||||||||||||||||||||||||||| |||| ||||||||||| |||| ||||||||||||    
T  31786 ctaattcagaggaatttggaaagcattggatgcttattctttggagaacgttggaaaaggacaatagtac-aagtgtacaaccactacctccactactct 31884  T
Q  240 gttttgtgtatgcaatagtacaagagaaacagttgt 275  Q
    ||||| ||| |||||||||||||||  |||||||||    
T  31885 gttttttgtctgcaatagtacaagaacaacagttgt 31920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 111; Significance: 4e-56; HSPs: 49)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 12 - 264
Target Start/End: Complemental strand, 26833267 - 26833014
Alignment:
Q  12 tcatcagaggttctaaagatcatcaggagctgaagatcatcagaaactgaaagaattgaagcttcaaaggttgttcaaatgttttaatcacgcctatcat 111  Q
    |||||||||||||| ||||||||||| || |||||||||||||||  |  |||||| |||| || ||| ||||||||||| |||||||||||||||||||    
T  26833267 tcatcagaggttctgaagatcatcagaagttgaagatcatcagaagttagaagaatggaagatttaaatgttgttcaaatattttaatcacgcctatcat 26833168  T
Q  112 tacagaagactagaagcatgaagtaacggctaattcaaaagaattt-gaaggcattagatgcttactctttggagaacgttgg-aaaaggacaattgtac 209  Q
    | ||||||  ||||||| ||| | ||||||||||||| | |||||| ||| ||||| || ||||| ||||||||||||||||| ||||||||||| |||     
T  26833167 tgcagaagtatagaagcttgatgcaacggctaattcagaggaatttggaaagcattcgaagcttattctttggagaacgttggaaaaaggacaatagta- 26833069  T
Q  210 gaagtgtacaacaactatctccactactctgttttgtgtatgcaatagtacaaga 264  Q
     ||||||||||| |||| ||||||||||||||||||||| || ||||||||||||    
T  26833068 taagtgtacaaccactacctccactactctgttttgtgtctgtaatagtacaaga 26833014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 41 - 256
Target Start/End: Original strand, 22461588 - 22461803
Alignment:
Q  41 ctgaagatcatcagaaactgaaagaattgaagcttcaaaggttgttcaaatgttttaatcacgcctatcattacagaagactagaagcatgaagtaacgg 140  Q
    |||||||||||||||| ||||| ||||| |||||||||||||||||| || | |||||||  || ||||||| |||||||||||||| |||||| ||||     
T  22461588 ctgaagatcatcagaagctgaacgaatttaagcttcaaaggttgttcgaaggatttaatctagcatatcattgcagaagactagaagaatgaagcaacga 22461687  T
Q  141 ctaattcaaaagaatttgaaggcattagatgcttactctttggagaacgttggaaaaggacaattgtacgaagtgtacaacaactatctccactactctg 240  Q
    |||||||||| | ||||||||||||| |||||||| || |||||||  |||| ||||||||||||||||| |||| ||||| ||||||||||||||  ||    
T  22461688 ctaattcaaatggatttgaaggcattggatgcttattcgttggagagagttgaaaaaggacaattgtacggagtgcacaaccactatctccactaccttg 22461787  T
Q  241 ttttgtgtatgcaata 256  Q
    |||||||| |||||||    
T  22461788 ttttgtgtctgcaata 22461803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 31 - 248
Target Start/End: Original strand, 18722585 - 18722803
Alignment:
Q  31 tcatcaggagctgaagatcatcagaaactgaaagaattgaagcttcaaaggttgttcaaatgttttaatcacgcctatcattaca-gaagactagaagca 129  Q
    ||||||||||| ||||||||||||||  ||||||| || | |||||||||  |||||||| | |||||||||| ||| |||| || |||||| |||||      
T  18722585 tcatcaggagcagaagatcatcagaagatgaaagagttaatgcttcaaagactgttcaaaggatttaatcacggctagcattgcaagaagacaagaagag 18722684  T
Q  130 tgaagtaacggctaattcaaaagaatttgaaggcattagatgcttactctttggagaacgttggaaaaggacaattgtacgaagtgtacaacaactatct 229  Q
    ||||| |||| ||| ||  ||||||||||||||||||||||||||| | |||| ||| ||||| ||||  |||||||||||||||||||||| |||||||    
T  18722685 tgaagcaacgactattttgaaagaatttgaaggcattagatgcttattttttgaagagcgttgaaaaactacaattgtacgaagtgtacaaccactatct 18722784  T
Q  230 ccactactctgttttgtgt 248  Q
    |||||||||||||||||||    
T  18722785 ccactactctgttttgtgt 18722803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 31 - 248
Target Start/End: Original strand, 18730930 - 18731148
Alignment:
Q  31 tcatcaggagctgaagatcatcagaaactgaaagaattgaagcttcaaaggttgttcaaatgttttaatcacgcctatcattaca-gaagactagaagca 129  Q
    ||||||||||| ||||||||||||||  ||||||| || | |||||||||  |||||||| | |||||||||| ||| |||| || |||||| |||||      
T  18730930 tcatcaggagcagaagatcatcagaagatgaaagagttaatgcttcaaagactgttcaaaggatttaatcacggctagcattgcaagaagacaagaagag 18731029  T
Q  130 tgaagtaacggctaattcaaaagaatttgaaggcattagatgcttactctttggagaacgttggaaaaggacaattgtacgaagtgtacaacaactatct 229  Q
    ||||| |||| ||| ||  ||||||||||||||||||||||||||| | |||| ||| ||||| ||||  |||||||||||||||||||||| |||||||    
T  18731030 tgaagcaacgactattttgaaagaatttgaaggcattagatgcttattttttgaagagcgttgaaaaactacaattgtacgaagtgtacaaccactatct 18731129  T
Q  230 ccactactctgttttgtgt 248  Q
    |||||||||||||||||||    
T  18731130 ccactactctgttttgtgt 18731148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 70 - 243
Target Start/End: Complemental strand, 43645068 - 43644895
Alignment:
Q  70 aagcttcaaaggttgttcaaatgttttaatcacgcctatcattacagaagactagaagcatgaagtaacggctaattcaaaagaatttgaaggcattaga 169  Q
    ||||||||||||||||||||||| |||||||||||||| |||| |||||||| |||||  ||||| ||||||||||||||| ||||||||||||||| ||    
T  43645068 aagcttcaaaggttgttcaaatgatttaatcacgcctagcattgcagaagaccagaagagtgaagaaacggctaattcaaatgaatttgaaggcattgga 43644969  T
Q  170 tgcttactctttggagaacgttggaaaaggacaattgtacgaagtgtacaacaactatctccactactctgttt 243  Q
    |||||  |||||| ||| ||||   |||| |||||||||||||||||||||| |||| ||||||||||| ||||    
T  43644968 tgcttgttctttgaagagcgttaataaagtacaattgtacgaagtgtacaaccactacctccactactcggttt 43644895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 39 - 243
Target Start/End: Complemental strand, 19707709 - 19707505
Alignment:
Q  39 agctgaagatcatcagaaactgaaagaattgaagcttcaaaggttgttcaaatgttttaatcacgcctatcattacagaagactagaagcatgaagtaac 138  Q
    ||||||||||||||||||  |||||||||| |||||||||||| |||||||| |  |||||||  |||| |||| |||||||| |||||  ||||| |||    
T  19707709 agctgaagatcatcagaagatgaaagaattaaagcttcaaaggctgttcaaaggacttaatcattcctaacattgcagaagaccagaagagtgaagcaac 19707610  T
Q  139 ggctaattcaaaagaatttgaaggcattagatgcttactctttggagaacgttggaaaaggacaattgtacgaagtgtacaacaactatctccactactc 238  Q
    |||||||||||| |||||||||||||||  ||| ||  |||||| |||||||||  |||| |||||||||||||||||||||| ||||  ||| ||||||    
T  19707609 ggctaattcaaatgaatttgaaggcattgaatggttgttctttgaagaacgttgacaaagtacaattgtacgaagtgtacaaccactacatcctctactc 19707510  T
Q  239 tgttt 243  Q
     ||||    
T  19707509 agttt 19707505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 31 - 248
Target Start/End: Original strand, 18685336 - 18685554
Alignment:
Q  31 tcatcaggagctgaagatcatcagaaactgaaagaattgaagcttcaaaggttgttcaaatgttttaatcacgcctatcattaca-gaagactagaagca 129  Q
    ||||||||| | ||||||||||||||  | ||||| || | |||||||||  |||||||| | | |||||||| ||| |||| || |||||| |||||      
T  18685336 tcatcaggatcggaagatcatcagaagataaaagagttaatgcttcaaagactgttcaaaggatataatcacgtctagcattgcaagaagaccagaagag 18685435  T
Q  130 tgaagtaacggctaattcaaaagaatttgaaggcattagatgcttactctttggagaacgttggaaaaggacaattgtacgaagtgtacaacaactatct 229  Q
    ||||| |||  ||| ||  ||||||||||||||||||||||||||| | |||| ||| ||||| ||||  |||||||||||||||||||||| |||||||    
T  18685436 tgaagcaacaactattttgaaagaatttgaaggcattagatgcttattttttgaagagcgttgaaaaactacaattgtacgaagtgtacaaccactatct 18685535  T
Q  230 ccactactctgttttgtgt 248  Q
    |||||||||||||||||||    
T  18685536 ccactactctgttttgtgt 18685554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 62 - 243
Target Start/End: Complemental strand, 19156377 - 19156195
Alignment:
Q  62 aagaattgaagcttcaaaggttgttcaaatgttttaatcacgcctat-cattacagaagactagaagcatgaagtaacggctaattcaaaagaatttgaa 160  Q
    ||||||| |||||||||||| |||||||  | ||||||| || |||| |||| ||||||||||||||  ||||| |||| ||||||  |||| |||||||    
T  19156377 aagaattaaagcttcaaaggctgttcaatggatttaatctcgtctatgcattgcagaagactagaagagtgaagcaacgactaatttgaaaggatttgaa 19156278  T
Q  161 ggcattagatgcttactctttggagaacgttggaaaaggacaattgtacgaagtgtacaacaactatctccactactctgttt 243  Q
    |||||| |||||||  |||||| ||| |||||  |||| ||||||||||||| |||||||| |||||||||||||||| ||||    
T  19156277 ggcattggatgcttgttctttgaagagcgttgacaaagtacaattgtacgaaatgtacaaccactatctccactactcagttt 19156195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 152 - 275
Target Start/End: Complemental strand, 18772709 - 18772587
Alignment:
Q  152 gaatttgaaggcattagatgcttactctttggagaacgttggaaaaggacaattgtacgaagtgtacaacaactatctccactactctgttttgtgtatg 251  Q
    ||||||||||||||| |||||||| |||||||||||||||||||||||||||| |||| || |||||||| | || |||||||||||| |||||||| ||    
T  18772709 gaatttgaaggcattggatgcttattctttggagaacgttggaaaaggacaatagtac-aaatgtacaaccattacctccactactcttttttgtgtctg 18772611  T
Q  252 caatagtacaagagaaacagttgt 275  Q
    ||||| |||||||  |||||||||    
T  18772610 caataatacaagaacaacagttgt 18772587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 70 - 243
Target Start/End: Complemental strand, 24646511 - 24646337
Alignment:
Q  70 aagcttcaaaggttgttcaaatgttttaatcacgcctat-cattacagaagactagaagcatgaagtaacggctaattcaaaagaatttgaaggcattag 168  Q
    |||||||||||||||||||| || ||||||| || |||  |||| || ||||||| |||  || || ||| |||| ||  |||| ||||| ||||||| |    
T  24646511 aagcttcaaaggttgttcaattgatttaatctcgtctaagcattgcataagactaaaagagtgtagcaacagctattttgaaaggatttgcaggcattgg 24646412  T
Q  169 atgcttactctttggagaacgttggaaaaggacaattgtacgaagtgtacaacaactatctccactactctgttt 243  Q
    ||||||| |||||| |||  ||||  |||| |||||||||||||||||||||| |||||||||||||||| ||||    
T  24646411 atgcttattctttgaagagtgttgacaaagtacaattgtacgaagtgtacaaccactatctccactactcagttt 24646337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 27 - 226
Target Start/End: Complemental strand, 33083073 - 33082873
Alignment:
Q  27 aagatcatcaggagctgaagatcatcagaaactgaaagaattgaagcttcaaaggttgttcaaatgttttaatcacgcctat-cattacagaagactaga 125  Q
    ||||||| ||| |||||||| ||||||| |  || |||| || ||||||||||||||||||||  | ||||||| || |||  |||| |||||||  |||    
T  33083073 aagatcaccagaagctgaagttcatcaggagatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctaagcattgcagaagatcaga 33082974  T
Q  126 agcatgaagtaacggctaattcaaaagaatttgaaggcattagatgcttactctttggagaacgttggaaaaggacaattgtacgaagtgtacaacaact 225  Q
    ||  ||||| |||| ||| ||  |||| ||||||||||||| |||||||  |||||| ||| |||||  |||| |||||||||||||||||||||| |||    
T  33082973 agagtgaagcaacgactattttgaaaggatttgaaggcattggatgcttgttctttgaagagcgttgacaaagtacaattgtacgaagtgtacaaccact 33082874  T
Q  226 a 226  Q
    |    
T  33082873 a 33082873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 41 - 246
Target Start/End: Original strand, 19956289 - 19956496
Alignment:
Q  41 ctgaagatcatcagaaactga-aagaattgaagcttcaaaggttgttcaaatgt-tttaatcacgcctatcattacagaagactagaagcatgaagtaac 138  Q
    |||||||||||||||| |||| ||||||| ||||||||||   |||||||| |  ||||| | ||||||  |||  ||||||  |||||  ||||| |||    
T  19956289 ctgaagatcatcagaagctgagaagaattaaagcttcaaatactgttcaaaaggatttaacctcgcctagtattgtagaagatcagaagagtgaagcaac 19956388  T
Q  139 ggctaattcaaaagaatttgaaggcattagatgcttactctttggagaacgttggaaaaggacaattgtacgaagtgtacaacaactatctccactactc 238  Q
    | ||||||| |||| ||||||||||||| ||| |||  || ||| ||| ||||| |||||||||||||||| || |||||||| |||| ||||| ||| |    
T  19956389 gactaattctaaaggatttgaaggcattggatactttttcattgaagagcgttgaaaaaggacaattgtactaattgtacaaccactacctccaataccc 19956488  T
Q  239 tgttttgt 246  Q
    ||||||||    
T  19956489 tgttttgt 19956496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 70 - 244
Target Start/End: Original strand, 23185204 - 23185379
Alignment:
Q  70 aagcttcaaaggttgttcaaatgttttaatcacgcctat-cattacagaagactagaagcatgaagtaacggctaattcaaaagaatttgaaggcattag 168  Q
    ||||||||||||||||||||  | ||||||| || |||  |||| ||||||||| |||   ||||| |||| ||| ||  |||| ||||||||||||| |    
T  23185204 aagcttcaaaggttgttcaatggatttaatctcgtctaagcattgcagaagactggaaaagtgaagcaacgactagtttgaaaggatttgaaggcattgg 23185303  T
Q  169 atgcttactctttggagaacgttggaaaaggacaattgtacgaagtgtacaacaactatctccactactctgtttt 244  Q
    ||||||| ||||   ||| |||||  |||| |||||||||||||||||||||| |||| ||||||| |||||||||    
T  23185304 atgcttattcttcaaagagcgttgacaaagtacaattgtacgaagtgtacaaccactacctccactgctctgtttt 23185379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 149 - 243
Target Start/End: Original strand, 12757821 - 12757915
Alignment:
Q  149 aaagaatttgaaggcattagatgcttactctttggagaacgttggaaaaggacaattgtacgaagtgtacaacaactatctccactactctgttt 243  Q
    |||| ||||||||||||| |||||||  |||||| ||| |||||  |||| |||||||||||||||||||||| |||||||||||||||| ||||    
T  12757821 aaaggatttgaaggcattggatgcttgttctttgaagagcgttgacaaagtacaattgtacgaagtgtacaaccactatctccactactcagttt 12757915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 70 - 243
Target Start/End: Complemental strand, 39693708 - 39693534
Alignment:
Q  70 aagcttcaaaggttgttcaaatgttttaatcacgcctat-cattacagaagactagaagcatgaagtaacggctaattcaaaagaatttgaaggcattag 168  Q
    ||||||||||||||||||||  | || |||| || |||  |||| ||||||||| ||||  ||||| || | ||| ||  |||| ||||||| ||||| |    
T  39693708 aagcttcaaaggttgttcaatggattcaatctcgtctaagcattgcagaagactggaagagtgaagcaatgactattttgaaaggatttgaaagcattgg 39693609  T
Q  169 atgcttactctttggagaacgttggaaaaggacaattgtacgaagtgtacaacaactatctccactactctgttt 243  Q
    ||||||  |||||| ||| |||||  |||| |||||||||||||||||||||| |||||||||||||||| ||||    
T  39693608 atgcttgttctttgaagagcgttgacaaagtacaattgtacgaagtgtacaaccactatctccactactcagttt 39693534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 70 - 238
Target Start/End: Complemental strand, 16189157 - 16188988
Alignment:
Q  70 aagcttcaaaggttgttcaaatgttttaatcacg-cctatcattacagaagactagaagcatgaagtaacggctaattcaaaagaatttgaaggcattag 168  Q
    ||||||||||||||||| ||  | ||||||| || || | |||| ||||||||| ||||  ||||| |||| ||| ||  |||  ||||||||||||| |    
T  16189157 aagcttcaaaggttgtttaatggatttaatctcgtccaaccattgcagaagactggaagagtgaagcaacgactattttgaaatgatttgaaggcattgg 16189058  T
Q  169 atgcttactctttggagaacgttggaaaaggacaattgtacgaagtgtacaacaactatctccactactc 238  Q
    ||||||| ||||   ||| |||||  |||| |||||||||||||||||||||| ||||||||||||||||    
T  16189057 atgcttattcttctaagagcgttgacaaagtacaattgtacgaagtgtacaaccactatctccactactc 16188988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 71 - 243
Target Start/End: Original strand, 16681282 - 16681455
Alignment:
Q  71 agcttcaaaggttgttcaaatgttttaatcacgcctat-cattacagaagactagaagcatgaagtaacggctaattcaaaagaatttgaaggcattaga 169  Q
    ||||||||||| |||||||  | ||||||| || |||  |||| ||||||||| ||||  ||||| |||| ||| ||  |||| ||||||||||||||||    
T  16681282 agcttcaaaggctgttcaatggatttaatctcgtctaagcattgcagaagactggaagagtgaagcaacgtctagtttgaaaggatttgaaggcattaga 16681381  T
Q  170 tgcttactctttggagaacgttggaaaaggacaattgtacgaagtgtacaacaactatctccactactctgttt 243  Q
    |||||  |||||| ||| |||||  | || |||||||||||||||||||||| |||||||| | ||||| ||||    
T  16681382 tgcttgttctttgaagagcgttgacatagtacaattgtacgaagtgtacaaccactatctctagtactcagttt 16681455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 149 - 238
Target Start/End: Complemental strand, 17914552 - 17914463
Alignment:
Q  149 aaagaatttgaaggcattagatgcttactctttggagaacgttggaaaaggacaattgtacgaagtgtacaacaactatctccactactc 238  Q
    |||| |||||||||||||||||||||  |||||| ||| |||||  |||| |||||||||||||||||| ||| ||||||||||||||||    
T  17914552 aaaggatttgaaggcattagatgcttgttctttgaagagcgttgacaaagtacaattgtacgaagtgtataaccactatctccactactc 17914463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 24 - 243
Target Start/End: Original strand, 602652 - 602872
Alignment:
Q  24 ctaaagatcatcaggagctgaagatcatcagaaactgaaagaattgaagcttcaaaggttgttcaaatgttttaatcacgcctat-cattacagaagact 122  Q
    ||||||||||  || |||| ||| ||||||| || || |||| || || ||||||||||||||||   | || |||| || |||  |||| |||||||||    
T  602652 ctaaagatcacaagaagctaaagttcatcaggaaatgcaagacttaaaacttcaaaggttgttcattggattcaatctcgtctaagcattgcagaagact 602751  T
Q  123 agaagcatgaagtaacggctaattcaaaagaatttgaaggcattagatgcttactctttggagaacgttggaaaaggacaattgtacgaagtgtacaaca 222  Q
     ||||  ||||| || | ||| ||  |||| ||||||| ||||| |||||||  |||||| ||| |||||  |||| ||||||||||||||||||||||     
T  602752 tgaagagtgaagcaatgactattttgaaaggatttgaaagcattggatgcttgttctttgaagagcgttgacaaagtacaattgtacgaagtgtacaacc 602851  T
Q  223 actatctccactactctgttt 243  Q
    |||||||||||||||| ||||    
T  602852 actatctccactactcagttt 602872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 149 - 244
Target Start/End: Complemental strand, 16207399 - 16207304
Alignment:
Q  149 aaagaatttgaaggcattagatgcttactctttggagaacgttggaaaaggacaattgtacgaagtgtacaacaactatctccactactctgtttt 244  Q
    |||| ||||||||||||| |||||||  ||||   ||| |||||  |||| |||||||||||||||||||||| ||||||||||||||||||||||    
T  16207399 aaaggatttgaaggcattggatgcttgttcttcaaagagcgttgacaaagtacaattgtacgaagtgtacaaccactatctccactactctgtttt 16207304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 27 - 243
Target Start/End: Original strand, 18321094 - 18321311
Alignment:
Q  27 aagatcatcaggagctgaagatcatcagaaactgaaagaattgaagcttcaaaggttgttcaaatgttttaatcacgcctat-cattacagaagactaga 125  Q
    ||||||| ||| |||||||| ||||||| |  || |||| || ||||||||||||||||||||  | ||||||| || |||  |||| ||  |||| | |    
T  18321094 aagatcaccagaagctgaagttcatcaggagatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctaagcattgcatgagaccaaa 18321193  T
Q  126 agcatgaagtaacggctaattcaaaagaatttgaaggcattagatgcttactctttggagaacgttggaaaaggacaattgtacgaagtgtacaacaact 225  Q
    ||  ||||| ||| |||| ||  |||| |||||| |||||| |||||||  |||||| ||  |||||  |||| |||||||||||||||||||||| | |    
T  18321194 agagtgaagcaacagctattttcaaaggatttgagggcattggatgcttgttctttgaagggcgttgacaaagtacaattgtacgaagtgtacaaccatt 18321293  T
Q  226 atctccactactctgttt 243  Q
    ||||||||||||| ||||    
T  18321294 atctccactactcagttt 18321311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 29 - 243
Target Start/End: Complemental strand, 17701959 - 17701744
Alignment:
Q  29 gatcatcaggagctgaagatcatcagaaactgaaagaattgaagcttcaaaggttgttcaaatgttttaatcacgcctat-cattacagaagactagaag 127  Q
    ||||| ||| |||||||| |||||||||  ||| ||| || ||||||||||||||||||||    ||||||| || |||  |||| |||||||  |||||    
T  17701959 gatcaccagaagctgaagttcatcagaagatgagagacttaaagcttcaaaggttgttcaatgaatttaatctcgtctaagcattgcagaagatcagaag 17701860  T
Q  128 catgaagtaacggctaattcaaaagaatttgaaggcattagatgcttactctttggagaacgttggaaaaggacaattgtacgaagtgtacaacaactat 227  Q
      ||||| |||  ||| ||  |||| ||||||||||||| |||||| | || ||  ||| |||||| |||| | ||||||||||||| |||||| ||||     
T  17701859 agtgaagcaacaactattttgaaaggatttgaaggcattggatgctaattcctttaagagcgttggcaaagtataattgtacgaagtttacaaccactac 17701760  T
Q  228 ctccactactctgttt 243  Q
    ||||||||||| ||||    
T  17701759 ctccactactcagttt 17701744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 109 - 244
Target Start/End: Complemental strand, 17797555 - 17797420
Alignment:
Q  109 cattacagaagactagaagcatgaagtaacggctaattcaaaagaatttgaaggcattagatgcttactctttggagaacgttggaaaaggacaattgta 208  Q
    |||||||||||||| |||   ||| | |||||||| ||  |||| | ||||||||||| |||||||  ||||   ||| |||||  |||| |||||||||    
T  17797555 cattacagaagactggaaaagtgatgcaacggctagtttgaaaggaattgaaggcattggatgcttgttcttcaaagagcgttgacaaagtacaattgta 17797456  T
Q  209 cgaagtgtacaacaactatctccactactctgtttt 244  Q
    ||||||||||||| |||| |||||||||||||||||    
T  17797455 cgaagtgtacaaccactacctccactactctgtttt 17797420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 149 - 238
Target Start/End: Original strand, 17441866 - 17441954
Alignment:
Q  149 aaagaatttgaaggcattagatgcttactctttggagaacgttggaaaaggacaattgtacgaagtgtacaacaactatctccactactc 238  Q
    |||| |||||||| |||| |||||||| |||||| ||| |||||  |||| |||||||||| ||||||||||| ||||||||||||||||    
T  17441866 aaaggatttgaag-cattggatgcttattctttgaagagcgttgacaaagtacaattgtactaagtgtacaaccactatctccactactc 17441954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 154 - 243
Target Start/End: Complemental strand, 18719089 - 18719000
Alignment:
Q  154 atttgaaggcattagatgcttactctttggagaacgttggaaaaggacaattgtacgaagtgtacaacaactatctccactactctgttt 243  Q
    ||||||| ||||| |||||||  |||||| ||| |||||  | || |||||||||||||||||||||| |||||||||||||||| ||||    
T  18719089 atttgaaagcattggatgcttgttctttgaagagcgttgtcatagtacaattgtacgaagtgtacaaccactatctccactactcagttt 18719000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 149 - 244
Target Start/End: Complemental strand, 17267567 - 17267472
Alignment:
Q  149 aaagaatttgaaggcattagatgcttactctttggagaacgttggaaaaggacaattgtacgaagtgtacaacaactatctccactactctgtttt 244  Q
    |||| ||||||| |||||||||||||  |||||| ||| | |||  | || ||||||||||||| |||||||| |||||||||||||||| |||||    
T  17267567 aaaggatttgaaagcattagatgcttgttctttgaagagcattgacatagtacaattgtacgaattgtacaaccactatctccactactcagtttt 17267472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 149 - 243
Target Start/End: Original strand, 17525787 - 17525881
Alignment:
Q  149 aaagaatttgaaggcattagatgcttactctttggagaacgttggaaaaggacaattgtacgaagtgtacaacaactatctccactactctgttt 243  Q
    |||| ||||||| ||||| |||||||  |||||| ||| |||||  |||| |||||||||| ||||||||||| ||||||| |||||||| ||||    
T  17525787 aaaggatttgaaagcattggatgcttgttctttgaagagcgttgacaaagtacaattgtacaaagtgtacaaccactatcttcactactcagttt 17525881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 158 - 244
Target Start/End: Original strand, 40845454 - 40845540
Alignment:
Q  158 gaaggcattagatgcttactctttggagaacgttggaaaaggacaattgtacgaagtgtacaacaactatctccactactctgtttt 244  Q
    ||||||||| |||||||| ||||   ||| |||||  | || || ||||||||||||||||||| ||||||||||||||||||||||    
T  40845454 gaaggcattggatgcttattcttcaaagagcgttgacatagtacgattgtacgaagtgtacaaccactatctccactactctgtttt 40845540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 154 - 243
Target Start/End: Complemental strand, 18679903 - 18679814
Alignment:
Q  154 atttgaaggcattagatgcttactctttggagaacgttggaaaaggacaattgtacgaagtgtacaacaactatctccactactctgttt 243  Q
    ||||||| ||||| |||||||  |||||| ||| |||||  | || |||||||||||||||||||||| |||||||| ||||||| ||||    
T  18679903 atttgaaagcattggatgcttgttctttgaagagcgttgacatagtacaattgtacgaagtgtacaaccactatctctactactcagttt 18679814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 149 - 244
Target Start/End: Original strand, 15336146 - 15336241
Alignment:
Q  149 aaagaatttgaaggcattagatgcttactctttggagaacgttggaaaaggacaattgtacgaagtgtacaacaactatctccactactctgtttt 244  Q
    |||| ||||||||||||| |||||||| || |   ||| |||||  |||| ||  |||||||||||||||||| |||| |||||||||||||||||    
T  15336146 aaaggatttgaaggcattggatgcttattcgtcaaagagcgttgacaaagtacgtttgtacgaagtgtacaaccactacctccactactctgtttt 15336241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 149 - 244
Target Start/End: Original strand, 15425211 - 15425306
Alignment:
Q  149 aaagaatttgaaggcattagatgcttactctttggagaacgttggaaaaggacaattgtacgaagtgtacaacaactatctccactactctgtttt 244  Q
    |||| ||||||||||||| |||||||| || |   ||| |||||  |||| ||  |||||||||||||||||| |||| |||||||||||||||||    
T  15425211 aaaggatttgaaggcattggatgcttattcgtcaaagagcgttgacaaagtacgtttgtacgaagtgtacaaccactacctccactactctgtttt 15425306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 149 - 244
Target Start/End: Original strand, 15516515 - 15516610
Alignment:
Q  149 aaagaatttgaaggcattagatgcttactctttggagaacgttggaaaaggacaattgtacgaagtgtacaacaactatctccactactctgtttt 244  Q
    |||| ||||||||||||| |||||||| || |   ||| |||||  |||| ||  |||||||||||||||||| |||| |||||||||||||||||    
T  15516515 aaaggatttgaaggcattggatgcttattcgtcaaagagcgttgacaaagtacgtttgtacgaagtgtacaaccactacctccactactctgtttt 15516610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 202 - 245
Target Start/End: Complemental strand, 19943275 - 19943232
Alignment:
Q  202 aattgtacgaagtgtacaacaactatctccactactctgttttg 245  Q
    |||||||||||||||||||| |||| ||||||||||||||||||    
T  19943275 aattgtacgaagtgtacaaccactacctccactactctgttttg 19943232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 204 - 246
Target Start/End: Complemental strand, 9320606 - 9320564
Alignment:
Q  204 ttgtacgaagtgtacaacaactatctccactactctgttttgt 246  Q
    |||||||||||||||||| |||| |||||||||||||||||||    
T  9320606 ttgtacgaagtgtacaaccactacctccactactctgttttgt 9320564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 200 - 238
Target Start/End: Complemental strand, 25164112 - 25164074
Alignment:
Q  200 acaattgtacgaagtgtacaacaactatctccactactc 238  Q
    |||||||||||||||||||||| ||||||||||||||||    
T  25164112 acaattgtacgaagtgtacaaccactatctccactactc 25164074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 149 - 243
Target Start/End: Complemental strand, 29693408 - 29693314
Alignment:
Q  149 aaagaatttgaaggcattagatgcttactctttggagaacgttggaaaaggacaattgtacgaagtgtacaacaactatctccactactctgttt 243  Q
    |||| ||||||| |||||  ||||||  |||||| ||| | |||  |||| |||||||||||||||||||||| | |||||||||||||| ||||    
T  29693408 aaaggatttgaaagcattgtatgcttgttctttgaagagctttgacaaagtacaattgtacgaagtgtacaaccattatctccactactcagttt 29693314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 207 - 244
Target Start/End: Complemental strand, 6407761 - 6407724
Alignment:
Q  207 tacgaagtgtacaacaactatctccactactctgtttt 244  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  6407761 tacgaagtgtacaaccactatctccactactctgtttt 6407724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 204 - 244
Target Start/End: Original strand, 14989564 - 14989604
Alignment:
Q  204 ttgtacgaagtgtacaacaactatctccactactctgtttt 244  Q
    ||||||||| |||||||| ||||||||||||||||||||||    
T  14989564 ttgtacgaattgtacaaccactatctccactactctgtttt 14989604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 204 - 244
Target Start/End: Original strand, 18151759 - 18151799
Alignment:
Q  204 ttgtacgaagtgtacaacaactatctccactactctgtttt 244  Q
    ||||||||| |||||||| ||||||||||||||||||||||    
T  18151759 ttgtacgaattgtacaaccactatctccactactctgtttt 18151799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 204 - 244
Target Start/End: Complemental strand, 22673816 - 22673776
Alignment:
Q  204 ttgtacgaagtgtacaacaactatctccactactctgtttt 244  Q
    |||||||||||||||||| ||||||||||||||| ||||||    
T  22673816 ttgtacgaagtgtacaaccactatctccactactttgtttt 22673776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 208 - 244
Target Start/End: Complemental strand, 43639817 - 43639781
Alignment:
Q  208 acgaagtgtacaacaactatctccactactctgtttt 244  Q
    |||||||||||||| ||||||||||||||||||||||    
T  43639817 acgaagtgtacaaccactatctccactactctgtttt 43639781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 204 - 244
Target Start/End: Original strand, 45538552 - 45538592
Alignment:
Q  204 ttgtacgaagtgtacaacaactatctccactactctgtttt 244  Q
    |||||||||||||||||| |||| |||||||||||||||||    
T  45538552 ttgtacgaagtgtacaaccactacctccactactctgtttt 45538592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 200 - 235
Target Start/End: Original strand, 20382503 - 20382538
Alignment:
Q  200 acaattgtacgaagtgtacaacaactatctccacta 235  Q
    |||||||||||||||||||||| |||||||||||||    
T  20382503 acaattgtacgaagtgtacaaccactatctccacta 20382538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 203 - 244
Target Start/End: Original strand, 30421541 - 30421582
Alignment:
Q  203 attgtacgaagtgtacaacaactatctccactactctgtttt 244  Q
    |||||||||||| |||||| |||| |||||||||||||||||    
T  30421541 attgtacgaagtttacaaccactacctccactactctgtttt 30421582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 204 - 244
Target Start/End: Original strand, 13430741 - 13430781
Alignment:
Q  204 ttgtacgaagtgtacaacaactatctccactactctgtttt 244  Q
    |||||||||||||||||| ||||  ||||||||||||||||    
T  13430741 ttgtacgaagtgtacaaccactacttccactactctgtttt 13430781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 202 - 238
Target Start/End: Complemental strand, 21932923 - 21932887
Alignment:
Q  202 aattgtacgaagtgtacaacaactatctccactactc 238  Q
    |||||||||||||||||||| |||| |||||||||||    
T  21932923 aattgtacgaagtgtacaaccactacctccactactc 21932887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 204 - 244
Target Start/End: Complemental strand, 22663154 - 22663114
Alignment:
Q  204 ttgtacgaagtgtacaacaactatctccactactctgtttt 244  Q
    |||||||||||||||||| | ||||||||||||||| ||||    
T  22663154 ttgtacgaagtgtacaaccaatatctccactactctatttt 22663114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 204 - 244
Target Start/End: Complemental strand, 24551312 - 24551272
Alignment:
Q  204 ttgtacgaagtgtacaacaactatctccactactctgtttt 244  Q
    |||||||||||||||||| |||| |||||||||| ||||||    
T  24551312 ttgtacgaagtgtacaaccactacctccactactttgtttt 24551272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 206 - 246
Target Start/End: Complemental strand, 28903495 - 28903455
Alignment:
Q  206 gtacgaagtgtacaacaactatctccactactctgttttgt 246  Q
    |||| ||||||||||| |||| |||||||||||||||||||    
T  28903495 gtacaaagtgtacaaccactagctccactactctgttttgt 28903455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 108; Significance: 3e-54; HSPs: 46)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 48 - 246
Target Start/End: Original strand, 10640365 - 10640564
Alignment:
Q  48 tcatcagaaactgaaagaattgaagcttcaaaggttgttcaaatgttttaatcacgcctatcattacagaagactagaagcatgaagtaacggctaattc 147  Q
    ||||||||| |||| |||||| ||||||||||||||||||||| | |||||||||||||| |||| |||||||| |||||  ||||| |||| |||||||    
T  10640365 tcatcagaagctgagagaattaaagcttcaaaggttgttcaaaggatttaatcacgcctagcattgcagaagaccagaagagtgaagcaacgactaattc 10640464  T
Q  148 aaaagaatttgaaggcattagatgcttactctttggagaacgttg-gaaaaggacaattgtacgaagtgtacaacaactatctccactactctgttttgt 246  Q
    ||||| |||||||||||||||||||||  |||||| ||| |||||  |||||||||||||||||||||||||||| |||| |||||||||| ||||||||    
T  10640465 aaaaggatttgaaggcattagatgcttgttctttgaagagcgttgaaaaaaggacaattgtacgaagtgtacaaccactacctccactactatgttttgt 10640564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 42 - 242
Target Start/End: Complemental strand, 19470878 - 19470678
Alignment:
Q  42 tgaagatcatcagaaactgaaagaattgaagcttcaaaggttgttcaaatgttttaatcacgcctatcattacagaagactagaagcatgaagtaacggc 141  Q
    |||||||||||| ||  ||| |||| ||||||||||||||||||||||  | |||||||||||||| |||| || ||||| ||||| |||||| |||| |    
T  19470878 tgaagatcatcaaaagatgagagaactgaagcttcaaaggttgttcaacagatttaatcacgcctagcattgcacaagaccagaagaatgaagcaacgac 19470779  T
Q  142 taattcaaaagaatttgaaggcattagatgcttactctttggagaacgttggaaaaggacaattgtacgaagtgtacaacaactatctccactactctgt 241  Q
    ||||||||||| ||||||||||||| |||||||  |||||| ||| ||| | ||||||||||||||||||||| |||||| |||| |||||||||| |||    
T  19470778 taattcaaaaggatttgaaggcattggatgcttgttctttgcagagcgtggaaaaaggacaattgtacgaagtttacaaccactacctccactactatgt 19470679  T
Q  242 t 242  Q
    |    
T  19470678 t 19470678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 27 - 264
Target Start/End: Complemental strand, 25930700 - 25930459
Alignment:
Q  27 aagatcatcaggagctgaagatcatcagaaactgaaagaattgaagcttcaaaggttgttcaaa----tgttttaatcacgcctatcattacagaag-ac 121  Q
    ||||||||||| || ||||||||||| ||| |||||||| | |||||||||||| ||||  | |    ||||||||||| |||||||||| |||||| |     
T  25930700 aagatcatcagaagttgaagatcatctgaagctgaaagactggaagcttcaaagtttgtcaagagcagtgttttaatcatgcctatcattgcagaaggaa 25930601  T
Q  122 tagaagcatgaagtaacggctaattcaaaagaatttgaaggcattagatgcttactctttggagaacgttggaaaaggacaattgtacgaagtgtacaac 221  Q
    ||||||| || || ||||||||||||| | |||||||||| |||| |||||||| || ||| ||| ||||||||||||| ||| |||| || ||||||||    
T  25930600 tagaagcctggagcaacggctaattcagaggaatttgaagtcattggatgcttattccttgaagagcgttggaaaaggataatagtac-aattgtacaac 25930502  T
Q  222 aactatctccactactctgttttgtgtatgcaatagtacaaga 264  Q
     ||||||||||||||||| |||||||| |||||||||||||||    
T  25930501 cactatctccactactctcttttgtgtctgcaatagtacaaga 25930459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 41 - 264
Target Start/End: Complemental strand, 17928000 - 17927774
Alignment:
Q  41 ctgaagatcatcagaaactgaaagaattgaagcttcaaaggttgttcaaatgtt-tta--atcacgcctatcattacagaagactagaagcatgaagtaa 137  Q
    |||||||||||||||| |   |||| | ||||||||||| || ||| ||||||| |||  ||||||||||||||| ||||||| | ||||| ||||| ||    
T  17928000 ctgaagatcatcagaagccagaagactggaagcttcaaaagtggtt-aaatgttgttattatcacgcctatcattgcagaagaatggaagcctgaagcaa 17927902  T
Q  138 cggctaattcaaaagaa-tttgaaggcattagatgcttactctttggagaacgttggaaaaggacaattgtacgaagtgtacaacaactatctccactac 236  Q
    ||||||||||||||||| |||||||||||| |||||||| ||||||||||| |||||||||| | ||| |||| | ||||||||||| ||||||||||||    
T  17927901 cggctaattcaaaagaattttgaaggcattggatgcttattctttggagaatgttggaaaagaagaatagtac-atgtgtacaacaaatatctccactac 17927803  T
Q  237 tctg-ttttgtgtatgcaatagtacaaga 264  Q
    |||| |||| ||| |||||||||||||||    
T  17927802 tctgtttttatgtctgcaatagtacaaga 17927774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 152 - 264
Target Start/End: Complemental strand, 19625905 - 19625794
Alignment:
Q  152 gaatttgaaggcattagatgcttactctttggagaacgttggaaaaggacaattgtacgaagtgtacaacaactatctccactactctgttttgtgtatg 251  Q
    |||||||||||||||  ||||||| |   |||||||||||||||||||||||| |||| ||||||||||| |||| ||||||||||||||||||||| ||    
T  19625905 gaatttgaaggcattgaatgcttatttcatggagaacgttggaaaaggacaatagtac-aagtgtacaaccactacctccactactctgttttgtgtctg 19625807  T
Q  252 caatagtacaaga 264  Q
    |||||||||||||    
T  19625806 caatagtacaaga 19625794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 139 - 264
Target Start/End: Complemental strand, 23298056 - 23297932
Alignment:
Q  139 ggctaattcaaaagaatttgaaggcattagatgcttactctttggagaacgttggaaaaggacaattgtacgaagtgtacaacaactatctccactactc 238  Q
    ||||| |||| | ||||| |||| |||| ||| |||| ||||||| ||| |||||||||||||||| |||| || |||||||| ||||||||||||||||    
T  23298056 ggctatttcataggaattggaagacatttgattcttattctttggggaatgttggaaaaggacaatagtac-aattgtacaactactatctccactactc 23297958  T
Q  239 tgttttgtgtatgcaatagtacaaga 264  Q
    |||||||||| |||||||||||||||    
T  23297957 tgttttgtgtctgcaatagtacaaga 23297932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 85 - 244
Target Start/End: Complemental strand, 26943741 - 26943582
Alignment:
Q  85 ttcaaatgttttaatcacgcctatcattacagaagactagaagcatgaagtaacggctaattcaaaagaatttgaaggcattagatgcttactctttgga 184  Q
    |||||| | |||||||| | ||| |||| ||||||||||||||  ||||| ||| |||| ||||| || ||| ||||||||| |||||||  |||||| |    
T  26943741 ttcaaaggatttaatcatgtctagcattgcagaagactagaagagtgaagcaaccgctatttcaataggattagaaggcattggatgcttgttctttgaa 26943642  T
Q  185 gaacgttggaaaaggacaattgtacgaagtgtacaacaactatctccactactctgtttt 244  Q
    || ||||||  ||| |||||||||||||||||||||| ||||  ||||||||||||||||    
T  26943641 gagcgttggcgaagtacaattgtacgaagtgtacaaccactacttccactactctgtttt 26943582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 98 - 264
Target Start/End: Complemental strand, 12348246 - 12348079
Alignment:
Q  98 atcacgcctatcattacagaag-actagaagcatgaagtaacggctaattcaaaagaatttgaaggcattagatgcttactctttggagaacgttggaaa 196  Q
    |||| |||||||||| || ||| | ||||||| || || || |||||||||| | |||||||||| |||| ||||||||  | ||| |||||||||||||    
T  12348246 atcatgcctatcattgcaaaaggaatagaagcctggagcaatggctaattcataggaatttgaagtcattggatgcttatcccttgaagaacgttggaaa 12348147  T
Q  197 ag-gacaattgtacgaagtgtacaacaactatctccactactctgttttgtgtatgcaatagtacaaga 264  Q
    |  ||||||  ||| || |||||||| ||||||||||||||||||||||||||  ||||||||||||||    
T  12348146 aatgacaataatac-aattgtacaaccactatctccactactctgttttgtgttagcaatagtacaaga 12348079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 70 - 243
Target Start/End: Complemental strand, 32544446 - 32544272
Alignment:
Q  70 aagcttcaaaggttgttcaaatgttttaatcacgcctat-cattacagaagactagaagcatgaagtaacggctaattcaaaagaatttgaaggcattag 168  Q
    ||||||||||||||||||||  | ||||||| || |||  |||| ||||||||| ||||  ||||| |||| ||| ||  |||| |||| |||||||| |    
T  32544446 aagcttcaaaggttgttcaatggatttaatctcgtctaagcattgcagaagactggaagagtgaagcaacgtctattttgaaaggatttaaaggcattgg 32544347  T
Q  169 atgcttactctttggagaacgttggaaaaggacaattgtacgaagtgtacaacaactatctccactactctgttt 243  Q
    ||| ||| ||||   ||| |||||  |||| |||||||||||||||||||||| |||| ||||||||||||||||    
T  32544346 atgtttattcttcaaagagcgttgacaaagtacaattgtacgaagtgtacaaccactacctccactactctgttt 32544272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 136 - 264
Target Start/End: Complemental strand, 7812123 - 7811996
Alignment:
Q  136 aacggctaattcaaaagaatttgaaggcattagatgcttactctttggagaacgttggaaaaggacaattgtacgaagtgtacaacaactatctccacta 235  Q
    |||| |||||||| | |||||| |||||||| |||||||| ||   | |||   || |||||||||||| |||| || |||||||| |||||||||||||    
T  7812123 aacgactaattcagaggaatttaaaggcattggatgcttattcaccgaagaggattagaaaaggacaatggtac-aattgtacaaccactatctccacta 7812025  T
Q  236 ctctgttttgtgtatgcaatagtacaaga 264  Q
    ||||||||||||| |||||||||||||||    
T  7812024 ctctgttttgtgtctgcaatagtacaaga 7811996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 71 - 243
Target Start/End: Complemental strand, 15987414 - 15987240
Alignment:
Q  71 agcttcaaaggttgttcaaatgttttaatcacgcctat-cattacagaagactagaagcatgaagtaacggctaattcaaaaga-atttgaaggcattag 168  Q
    ||||||||||| |||||||  | ||||||| || |||  |||| |||||||| |||||  ||||| || | ||| || |||||  ||||||||||||| |    
T  15987414 agcttcaaaggatgttcaatggatttaatctcgtctaagcattgcagaagaccagaagagtgaagcaatgactattttaaaagggatttgaaggcattgg 15987315  T
Q  169 atgcttactctttggagaacgttggaaaaggacaattgtacgaagtgtacaacaactatctccactactctgttt 243  Q
    ||||||  |||||| ||| |||||  |||| |||||||||||||||||||||| |||||||||| ||||| ||||    
T  15987314 atgcttgttctttgaagagcgttgacaaagtacaattgtacgaagtgtacaaccactatctccattactcagttt 15987240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 149 - 243
Target Start/End: Complemental strand, 18378415 - 18378321
Alignment:
Q  149 aaagaatttgaaggcattagatgcttactctttggagaacgttggaaaaggacaattgtacgaagtgtacaacaactatctccactactctgttt 243  Q
    |||| ||||||||||||| ||||| |  |||||| ||| |||||  |||| |||||||||||||||||||||| |||||||||||||||| ||||    
T  18378415 aaaggatttgaaggcattggatgcatgttctttgaagagcgttgataaagtacaattgtacgaagtgtacaaccactatctccactactcagttt 18378321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 109 - 243
Target Start/End: Original strand, 20112708 - 20112842
Alignment:
Q  109 cattacagaagactagaagcatgaagtaacggctaattcaaaagaatttgaaggcattagatgcttactctttggagaacgttggaaaaggacaattgta 208  Q
    |||| ||||||||  |||| |||||| |||| ||| ||  |||| ||||||| ||||| |||||||  |||||| ||| |||||  |||| |||||||||    
T  20112708 cattgcagaagaccggaagaatgaagcaacgactattttgaaaggatttgaaagcattggatgcttgttctttgaagagcgttgacaaagtacaattgta 20112807  T
Q  209 cgaagtgtacaacaactatctccactactctgttt 243  Q
    |||| |||||||| |||||||||||||||| ||||    
T  20112808 cgaaatgtacaaccactatctccactactcagttt 20112842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 152 - 275
Target Start/End: Complemental strand, 25592710 - 25592592
Alignment:
Q  152 gaatttgaaggcattagatgcttactctttggagaacgttggaaaaggacaattgtacgaagtgtacaacaactatctccactactctgttttgtgtatg 251  Q
    |||||||||| ||||||||||||| | | || ||| |||||    | |||||| |||| || |||||||| |||||||||||||||||||||||||| ||    
T  25592710 gaatttgaagtcattagatgcttattttctgaagagcgttg----atgacaatagtac-aattgtacaaccactatctccactactctgttttgtgtctg 25592616  T
Q  252 caatagtacaagagaaacagttgt 275  Q
    |||||||||||||  |||||||||    
T  25592615 caatagtacaagaacaacagttgt 25592592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 149 - 246
Target Start/End: Original strand, 14100488 - 14100585
Alignment:
Q  149 aaagaatttgaaggcattagatgcttactctttggagaacgttggaaaaggacaattgtacgaagtgtacaacaactatctccactactctgttttgt 246  Q
    |||| ||||||||||||| |||||||  |||||  ||| |||||  |||| |||||| ||||||||||||||| |||| |||||||||||||||||||    
T  14100488 aaaggatttgaaggcattggatgcttcttctttaaagagcgttgacaaagtacaattatacgaagtgtacaaccactacctccactactctgttttgt 14100585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 70 - 244
Target Start/End: Complemental strand, 9718024 - 9717849
Alignment:
Q  70 aagcttcaaaggttgttcaaatgttttaatcacgcctat-cattacagaagactagaagcatgaagtaacggctaattcaaaagaatttgaaggcattag 168  Q
    ||||||||||||||||||||  | ||||||| || |||  ||||  |||||||| ||||  ||||| |||  ||| ||  |||| |||| |||||||| |    
T  9718024 aagcttcaaaggttgttcaatggatttaatctcgtctaaacattgtagaagactggaagagtgaagcaacaactattttgaaaggatttaaaggcatttg 9717925  T
Q  169 atgcttactctttggagaacgttggaaaaggacaattgtacgaagtgtacaacaactatctccactactctgtttt 244  Q
    ||||||  ||||   ||| |||||  |||| |||||||||||||||||||||| |||| |||||||||||||||||    
T  9717924 atgcttgttcttcaaagagcgttgacaaagtacaattgtacgaagtgtacaaccactacctccactactctgtttt 9717849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 156 - 243
Target Start/End: Complemental strand, 13602266 - 13602179
Alignment:
Q  156 ttgaaggcattagatgcttactctttggagaacgttggaaaaggacaattgtacgaagtgtacaacaactatctccactactctgttt 243  Q
    ||||||||||| |||||||| |||||| |||||||||  |||  ||||||||| |||||||| ||| |||||||||||||||| ||||    
T  13602266 ttgaaggcattggatgcttattctttgaagaacgttgacaaaatacaattgtaagaagtgtataaccactatctccactactcagttt 13602179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 149 - 243
Target Start/End: Complemental strand, 24116929 - 24116835
Alignment:
Q  149 aaagaatttgaaggcattagatgcttactctttggagaacgttggaaaaggacaattgtacgaagtgtacaacaactatctccactactctgttt 243  Q
    |||| ||||||| ||||| |||||||  |||||| ||| |||||  | || |||||||||||||||||||||| |||||||||||||||| ||||    
T  24116929 aaaggatttgaaagcattggatgcttgttctttgaagagcgttgacatagtacaattgtacgaagtgtacaaccactatctccactactcagttt 24116835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 154 - 244
Target Start/End: Complemental strand, 29918113 - 29918023
Alignment:
Q  154 atttgaaggcattagatgcttactctttggagaacgttggaaaaggacaattgtacgaagtgtacaacaactatctccactactctgtttt 244  Q
    |||||||||||| ||||||||  ||||   ||| |||||  |||| |||||||||||||||||||||| |||| |||||||||||||||||    
T  29918113 atttgaaggcatcagatgcttgttcttcaaagagcgttgacaaagtacaattgtacgaagtgtacaaccactacctccactactctgtttt 29918023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 70 - 238
Target Start/End: Complemental strand, 15302381 - 15302212
Alignment:
Q  70 aagcttcaaaggttgttcaaatgttttaatcacgcctat-cattacagaagactagaagcatgaagtaacggctaattcaaaagaatttgaaggcattag 168  Q
    |||| |||||||||||||||  | ||||||| || |||  |||| ||||||||| |||   ||||| |||||||| ||  |||| |||| |||||||| |    
T  15302381 aagcgtcaaaggttgttcaatggatttaatctcgtctaaacattgcagaagactggaaaagtgaagcaacggctattttgaaaggatttaaaggcattgg 15302282  T
Q  169 atgcttactctttggagaacgttggaaaaggacaattgtacgaagtgtacaacaactatctccactactc 238  Q
    ||||||  |||||| ||| |||||  |  | |||||||||| ||||||||||| ||||||||||||||||    
T  15302281 atgcttgttctttgaagagcgttgacattgtacaattgtacaaagtgtacaaccactatctccactactc 15302212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 39 - 243
Target Start/End: Complemental strand, 23284776 - 23284571
Alignment:
Q  39 agctgaagatcatcagaaactgaaagaattgaagcttcaaaggttgttcaaatgttttaatcacgcctat-cattacagaagactagaagcatgaagtaa 137  Q
    |||||||| ||||||| |  || |||| || |||||||||| |||||||||  | ||||||| || |||  |||| |||||||| ||||   ||||| ||    
T  23284776 agctgaagttcatcaggagatgcaagacttaaagcttcaaatgttgttcaatggatttaatctcgtctaagcattgcagaagaccagaaaagtgaagcaa 23284677  T
Q  138 cggctaattcaaaagaatttgaaggcattagatgcttactctttggagaacgttggaaaaggacaattgtacgaagtgtacaacaactatctccactact 237  Q
    || ||| ||  |||| |||||||||||||  ||||||  || ||| ||| |||||  |||| |||||||||||||||||| ||| | |||||||||||||    
T  23284676 cgcctattttgaaaggatttgaaggcattgaatgcttgttccttgaagagcgttgacaaagtacaattgtacgaagtgtataaccattatctccactact 23284577  T
Q  238 ctgttt 243  Q
    | ||||    
T  23284576 cagttt 23284571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 155 - 243
Target Start/End: Complemental strand, 19086253 - 19086165
Alignment:
Q  155 tttgaaggcattagatgcttactctttggagaacgttggaaaaggacaattgtacgaagtgtacaacaactatctccactactctgttt 243  Q
    |||||| ||||| |||||||  |||||| ||| |||||  | || |||||||||||||||||||||| |||||||||||||||| ||||    
T  19086253 tttgaaagcattggatgcttgttctttgaagagcgttgacatagtacaattgtacgaagtgtacaaccactatctccactactcagttt 19086165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 27 - 241
Target Start/End: Original strand, 15531549 - 15531764
Alignment:
Q  27 aagatcatcaggagctgaagatcatcagaaactgaaagaattgaagcttcaaaggttgttcaaatgttttaatcacgcctat-cattacagaagactaga 125  Q
    ||||||| ||| || || || |||||||||  || |||| || |||||| |||||||||||||    ||||||| || |||  |||| ||||||||||||    
T  15531549 aagatcaccagaagttgtagttcatcagaagatgcaagacttaaagcttgaaaggttgttcaatgaatttaatctcgtctaagcattgcagaagactaga 15531648  T
Q  126 agcatgaagtaacggctaattcaaaagaatttgaaggcattagatgcttactctttggagaacgttggaaaaggacaattgtacgaagtgtacaacaact 225  Q
    ||  | ||  ||||| || ||  |||| ||||||||||||| |||||||  ||||   ||| |||||  |||| |||||||||||||| ||||||| |||    
T  15531649 agagtaaaacaacggttattttgaaaggatttgaaggcattggatgcttgttcttcaaagagcgttgacaaagtacaattgtacgaagcgtacaaccact 15531748  T
Q  226 atctccactactctgt 241  Q
    | ||||||||||||||    
T  15531749 acctccactactctgt 15531764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 149 - 243
Target Start/End: Complemental strand, 19624080 - 19623986
Alignment:
Q  149 aaagaatttgaaggcattagatgcttactctttggagaacgttggaaaaggacaattgtacgaagtgtacaacaactatctccactactctgttt 243  Q
    |||| ||||||| ||||| |||| ||  |||||||||| ||||  |  || |||||||||||||||||||||| |||||||||||||||| ||||    
T  19624080 aaaggatttgaaagcattggatgattgttctttggagagcgttacactagtacaattgtacgaagtgtacaaccactatctccactactcagttt 19623986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 71 - 244
Target Start/End: Complemental strand, 21625280 - 21625107
Alignment:
Q  71 agcttcaaaggttgttcaaatgttttaatcacgcctat-cattacagaagactagaagcatgaagtaacggctaattcaaaagaatttgaaggcattaga 169  Q
    |||||||||||||||||||  | ||||||| || |||  |||| ||||||| | ||||  | ||| |||||||| || ||| | |||||||||||||  |    
T  21625280 agcttcaaaggttgttcaatggatttaatctcgtctaagcattgcagaagattggaagagtaaagcaacggctatttgaaa-gcatttgaaggcattgca 21625182  T
Q  170 tgcttactctttggagaacgttggaaaaggacaattgtacgaagtgtacaacaactatctccactactctgtttt 244  Q
    |||||  ||||   ||| ||||   |||| |||||||||||||||||||||| ||||||||||||||| ||||||    
T  21625181 tgcttgttcttcaaagagcgttaacaaagtacaattgtacgaagtgtacaaccactatctccactactttgtttt 21625107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 154 - 243
Target Start/End: Original strand, 12715473 - 12715562
Alignment:
Q  154 atttgaaggcattagatgcttactctttggagaacgttggaaaaggacaattgtacgaagtgtacaacaactatctccactactctgttt 243  Q
    ||||||| |||||  |||| || |||||| ||| |||||  |||| |||||||||||||||||| ||| |||||||||||||||| ||||    
T  12715473 atttgaaagcattgtatgcctattctttgaagagcgttgacaaagtacaattgtacgaagtgtagaaccactatctccactactcagttt 12715562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 204 - 244
Target Start/End: Complemental strand, 12423307 - 12423267
Alignment:
Q  204 ttgtacgaagtgtacaacaactatctccactactctgtttt 244  Q
    |||||||||||||||||| ||||||||||||||||||||||    
T  12423307 ttgtacgaagtgtacaaccactatctccactactctgtttt 12423267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 204 - 244
Target Start/End: Original strand, 22076510 - 22076550
Alignment:
Q  204 ttgtacgaagtgtacaacaactatctccactactctgtttt 244  Q
    |||||||||||||||||| ||||||||||||||||||||||    
T  22076510 ttgtacgaagtgtacaaccactatctccactactctgtttt 22076550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 149 - 240
Target Start/End: Complemental strand, 21235226 - 21235135
Alignment:
Q  149 aaagaatttgaaggcattagatgcttactctttggagaacgttggaaaaggacaattgtacgaagtgtacaacaactatctccactactctg 240  Q
    |||| ||||||||||||| |||||||  ||||   ||| |||||  |||| ||||||||| |||||||||||| |||| |||||||||||||    
T  21235226 aaagcatttgaaggcattcgatgcttgttcttcaaagagcgttgacaaagtacaattgtatgaagtgtacaaccactacctccactactctg 21235135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 149 - 244
Target Start/End: Complemental strand, 22802242 - 22802147
Alignment:
Q  149 aaagaatttgaaggcattagatgcttactctttggagaacgttggaaaaggacaattgtacgaagtgtacaacaactatctccactactctgtttt 244  Q
    ||||||||| |||||||| |||||||  ||||   ||| ||||   |||| |||||||||||||||||||||| |||| |||||||||||| ||||    
T  22802242 aaagaatttaaaggcattggatgcttgttcttcaaagagcgttaacaaagtacaattgtacgaagtgtacaaccactacctccactactctatttt 22802147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 114 - 244
Target Start/End: Complemental strand, 15954839 - 15954709
Alignment:
Q  114 cagaagactagaagcatgaagtaacggctaattcaaaagaatttgaaggcattagatgcttactctttggagaacgttggaaaaggacaattgtacgaag 213  Q
    ||||||||| |||  |||||| |||| ||||||  |||| |||||||||||||  ||||||  | ||   ||| |||||  |||| ||  ||||||||||    
T  15954839 cagaagactggaaaaatgaagcaacgactaatttgaaaggatttgaaggcattgaatgcttgttattcaaagagcgttgacaaagtacgtttgtacgaag 15954740  T
Q  214 tgtacaacaactatctccactactctgtttt 244  Q
    |||||||| |||| |||||||||||||||||    
T  15954739 tgtacaaccactacctccactactctgtttt 15954709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 130 - 244
Target Start/End: Original strand, 20487947 - 20488061
Alignment:
Q  130 tgaagtaacggctaattcaaaagaatttgaaggcattagatgcttactctttggagaacgttggaaaaggacaattgtacgaagtgtacaacaactatct 229  Q
    ||||| |||||||| ||  |||| ||||||||||||| |||||||  ||||   ||| |||||  |||| ||  ||||||||||| |||||| |||| ||    
T  20487947 tgaagcaacggctattttgaaaggatttgaaggcattggatgcttgttcttcaaagagcgttgacaaagtacgtttgtacgaagtttacaaccactacct 20488046  T
Q  230 ccactactctgtttt 244  Q
    |||||||||||||||    
T  20488047 ccactactctgtttt 20488061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 154 - 244
Target Start/End: Complemental strand, 21618340 - 21618250
Alignment:
Q  154 atttgaaggcattagatgcttactctttggagaacgttggaaaaggacaattgtacgaagtgtacaacaactatctccactactctgtttt 244  Q
    ||||||||||||| |||||||| ||||   ||| |||||  | || ||  |||||||||||||||||| |||| |||||||||||||||||    
T  21618340 atttgaaggcattggatgcttattcttcaaagagcgttgacatagtacgtttgtacgaagtgtacaaccactacctccactactctgtttt 21618250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 203 - 244
Target Start/End: Complemental strand, 16336174 - 16336133
Alignment:
Q  203 attgtacgaagtgtacaacaactatctccactactctgtttt 244  Q
    ||||||||||||||||||| ||||||| ||||||||||||||    
T  16336174 attgtacgaagtgtacaaccactatctacactactctgtttt 16336133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 204 - 244
Target Start/End: Complemental strand, 12349039 - 12348999
Alignment:
Q  204 ttgtacgaagtgtacaacaactatctccactactctgtttt 244  Q
    |||||| ||||||||||| ||||||||||||||||||||||    
T  12349039 ttgtacaaagtgtacaaccactatctccactactctgtttt 12348999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 195 - 239
Target Start/End: Complemental strand, 13435587 - 13435543
Alignment:
Q  195 aaaggacaattgtacgaagtgtacaacaactatctccactactct 239  Q
    |||| |||||||||||||||||||||| |||| ||||||||||||    
T  13435587 aaagtacaattgtacgaagtgtacaaccactacctccactactct 13435543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 195 - 243
Target Start/End: Original strand, 16265244 - 16265292
Alignment:
Q  195 aaaggacaattgtacgaagtgtacaacaactatctccactactctgttt 243  Q
    |||| ||||||||||||||||| |||| |||| ||||||||||||||||    
T  16265244 aaagtacaattgtacgaagtgtgcaaccactacctccactactctgttt 16265292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 204 - 244
Target Start/End: Complemental strand, 16877259 - 16877219
Alignment:
Q  204 ttgtacgaagtgtacaacaactatctccactactctgtttt 244  Q
    |||||||||||||||||| |||| |||||||||||||||||    
T  16877259 ttgtacgaagtgtacaaccactacctccactactctgtttt 16877219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 204 - 244
Target Start/End: Complemental strand, 19482798 - 19482758
Alignment:
Q  204 ttgtacgaagtgtacaacaactatctccactactctgtttt 244  Q
    |||||||||||||||||| ||||||| ||||||||||||||    
T  19482798 ttgtacgaagtgtacaaccactatctgcactactctgtttt 19482758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 204 - 248
Target Start/End: Original strand, 19833136 - 19833180
Alignment:
Q  204 ttgtacgaagtgtacaacaactatctccactactctgttttgtgt 248  Q
    |||||||||||||||||  |||| |||||||||||||||||||||    
T  19833136 ttgtacgaagtgtacaagcactacctccactactctgttttgtgt 19833180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 204 - 244
Target Start/End: Original strand, 33352029 - 33352069
Alignment:
Q  204 ttgtacgaagtgtacaacaactatctccactactctgtttt 244  Q
    |||||||||||||||||  ||||||||||||||||||||||    
T  33352029 ttgtacgaagtgtacaatcactatctccactactctgtttt 33352069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 149 - 244
Target Start/End: Original strand, 20730752 - 20730847
Alignment:
Q  149 aaagaatttgaaggcattagatgcttactctttggagaacgttggaaaaggacaattgtacgaagtgtacaacaactatctccactactctgtttt 244  Q
    |||| ||||||||||||| |||| ||  ||||   ||| |||||  |||| |||||||||| ||||||||||| |||| ||||||| |||||||||    
T  20730752 aaaggatttgaaggcattggatgtttgttcttcaaagagcgttgacaaagtacaattgtacaaagtgtacaaccactacctccactgctctgtttt 20730847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 107 - 175
Target Start/End: Original strand, 16462658 - 16462727
Alignment:
Q  107 atcattacagaag-actagaagcatgaagtaacggctaattcaaaagaatttgaaggcattagatgctta 175  Q
    ||||||||||||| | ||||||| || || ||||||||| ||| | ||||||||||||||| ||||||||    
T  16462658 atcattacagaaggaatagaagcctggagaaacggctaaatcagaggaatttgaaggcattggatgctta 16462727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 204 - 244
Target Start/End: Original strand, 17316628 - 17316668
Alignment:
Q  204 ttgtacgaagtgtacaacaactatctccactactctgtttt 244  Q
    |||||||||||||||||| ||||||| ||||||| ||||||    
T  17316628 ttgtacgaagtgtacaaccactatctgcactactatgtttt 17316668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 204 - 244
Target Start/End: Original strand, 19066121 - 19066161
Alignment:
Q  204 ttgtacgaagtgtacaacaactatctccactactctgtttt 244  Q
    |||||||||||||||||| ||||  ||||||||||||||||    
T  19066121 ttgtacgaagtgtacaaccactacttccactactctgtttt 19066161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 195 - 243
Target Start/End: Complemental strand, 25594123 - 25594075
Alignment:
Q  195 aaaggacaattgtacgaagtgtacaacaactatctccactactctgttt 243  Q
    |||| ||||||||||||| |||||||| |||| ||||||||||| ||||    
T  25594123 aaagtacaattgtacgaaatgtacaaccactacctccactactcagttt 25594075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 105; Significance: 2e-52; HSPs: 4)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 23 - 243
Target Start/End: Original strand, 244169 - 244388
Alignment:
Q  23 tctaaagatcatcaggagctgaagatcatcagaaactgaaagaattgaagcttcaaaggttgttcaaatgttttaatcacgcctatcattacagaagact 122  Q
    ||||||||||||||||||||||||||||| ||||  ||| |||||||||| |||||||| |||||||| | |||||||||||||  | || ||||||||     
T  244169 tctaaagatcatcaggagctgaagatcat-agaagatgagagaattgaagtttcaaaggctgttcaaaagatttaatcacgcctggcgttgcagaagacc 244267  T
Q  123 agaagcatgaagtaacggctaattcaaaagaatttgaaggcattagatgcttactctttggagaacgttggaaaaggacaattgtacgaagtgtacaaca 222  Q
    |||||  ||||| |||  |||||||||||| |||||||| |||| |||||||  |||||| ||| ||||| ||||||||||||||||||||||||||||     
T  244268 agaagagtgaagcaacaactaattcaaaaggatttgaagacattggatgcttgttctttgaagagcgttgaaaaaggacaattgtacgaagtgtacaacc 244367  T
Q  223 actatctccactactctgttt 243  Q
    |||| ||||||||||||||||    
T  244368 actacctccactactctgttt 244388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 27 - 243
Target Start/End: Complemental strand, 220461 - 220245
Alignment:
Q  27 aagatcatcaggagctgaagatcatcagaaactgaaagaattgaagcttcaaaggttgttcaaatgttttaatcacgcctat-cattacagaagactaga 125  Q
    ||||||| ||| |||||||| ||||||| |  ||| ||| || |||||||||||| ||||||   ||||||||| || |||  |||| |||||||| ||     
T  220461 aagatcaccagaagctgaagttcatcaggagatgagagacttaaagcttcaaaggctgttcattggttttaatctcgtctaagcattgcagaagaccagg 220362  T
Q  126 agcatgaagtaacggctaattcaaaagaatttgaaggcattagatgcttactctttggagaacgttggaaaaggacaattgtacgaagtgtacaacaact 225  Q
    ||  ||||| ||||||||||||||| |||||||||| |||| |||||||  | |||| ||| |||||  |||| |||||||||||||||||| ||| |||    
T  220361 agagtgaagcaacggctaattcaaatgaatttgaag-cattggatgcttgttatttgaagagcgttgacaaagtacaattgtacgaagtgtataaccact 220263  T
Q  226 atctccactactctgttt 243  Q
    | ||||||||||| ||||    
T  220262 acctccactactcagttt 220245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 149 - 243
Target Start/End: Original strand, 377569 - 377663
Alignment:
Q  149 aaagaatttgaaggcattagatgcttactctttggagaacgttggaaaaggacaattgtacgaagtgtacaacaactatctccactactctgttt 243  Q
    |||| ||||||||||||| |||||||  |||||| ||| | |||  |||| |||||||||| ||||||||||| |||||||||||||||| ||||    
T  377569 aaaggatttgaaggcattggatgcttgttctttgaagagcattgacaaagtacaattgtaccaagtgtacaaccactatctccactactcagttt 377663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #4
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 204 - 244
Target Start/End: Complemental strand, 211444 - 211404
Alignment:
Q  204 ttgtacgaagtgtacaacaactatctccactactctgtttt 244  Q
    ||||||||||| |||||| |||| |||||||||||||||||    
T  211444 ttgtacgaagtatacaactactacctccactactctgtttt 211404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 100; Significance: 2e-49; HSPs: 58)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 31 - 246
Target Start/End: Original strand, 13893941 - 13894156
Alignment:
Q  31 tcatcaggagctgaagatcatcagaaactgaaagaattgaagcttcaaaggttgttcaaatgttttaatcacgcctatcattacagaagactagaagcat 130  Q
    ||||||||||||||||||||||||||  ||||| | || ||||||||||||||||||||| | |||||||||||||| |||| |||||||| |||||  |    
T  13893941 tcatcaggagctgaagatcatcagaagatgaaatacttaaagcttcaaaggttgttcaaaggatttaatcacgcctagcattgcagaagaccagaagagt 13894040  T
Q  131 gaagtaacggctaattcaaaagaatttgaaggcattagatgcttactctttggagaacgttggaaaaggacaattgtacgaagtgtacaacaactatctc 230  Q
    |||| ||||||||||||||||| |||||||||||||  ||| ||  |||||  | | | ||| |||||||||||||||| | ||||||||| |||| |||    
T  13894041 gaagcaacggctaattcaaaaggatttgaaggcattgaatgtttgttctttaaaaagcattgaaaaaggacaattgtacaacgtgtacaaccactacctc 13894140  T
Q  231 cactactctgttttgt 246  Q
    ||||||||||||||||    
T  13894141 cactactctgttttgt 13894156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 27 - 243
Target Start/End: Original strand, 39284503 - 39284719
Alignment:
Q  27 aagatcatcaggagctgaagatcatcagaaactgaaagaattgaagcttcaaaggttgttcaaatgttttaatcacgcctatcattacagaagactagaa 126  Q
    ||||||| ||| ||||||||||||||||||  ||| |||||  |||||||||||| |||||||| | |||||||||||||| |||| | |||||| ||||    
T  39284503 aagatcaccagaagctgaagatcatcagaagatgagagaatcaaagcttcaaaggctgttcaaaggatttaatcacgcctagcattgctgaagaccagaa 39284602  T
Q  127 gcatgaagtaacggctaattcaaaagaatttgaaggcattagatgcttactctttggagaacgttggaaaaggacaattgtacgaagtgtacaacaacta 226  Q
    |  ||||  |||| |||||||||| ||||||||||||||| |||| ||  |||||| ||| |||||  |||| |||||||||||||||||||||| ||||    
T  39284603 gagtgaaacaacgactaattcaaatgaatttgaaggcattggatgtttgttctttgaagagcgttgacaaagtacaattgtacgaagtgtacaaccacta 39284702  T
Q  227 tctccactactctgttt 243  Q
     ||||||||||| ||||    
T  39284703 cctccactactcagttt 39284719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 63 - 215
Target Start/End: Complemental strand, 13880772 - 13880620
Alignment:
Q  63 agaattgaagcttcaaaggttgttcaaatgttttaatcacgcctatcattacagaagactagaagcatgaagtaacggctaattcaaaagaatttgaagg 162  Q
    |||||| |||||||||||| |||||||| | |||||||||||||| |||| ||||||||||||||  ||||| |||| |||||||||||| |||||||||    
T  13880772 agaattaaagcttcaaaggctgttcaaaagatttaatcacgcctagcattgcagaagactagaagagtgaagcaacgactaattcaaaaggatttgaagg 13880673  T
Q  163 cattagatgcttactctttggagaacgttggaaaaggacaattgtacgaagtg 215  Q
    || | |||||||  |||||| ||| ||||| ||||||||||||||||||||||    
T  13880672 cactggatgcttgttctttgaagagcgttgaaaaaggacaattgtacgaagtg 13880620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 27 - 243
Target Start/End: Original strand, 19236982 - 19237198
Alignment:
Q  27 aagatcatcaggagctgaagatcatcagaaactgaaagaattgaagcttcaaaggttgttcaaatgttttaatcacgcctatcattacagaagactagaa 126  Q
    |||||||| ||||||||||||| | |||||  ||| ||| || |||||||||||| |||||||| | ||||||| || ||| |||| |||||||| ||||    
T  19236982 aagatcattaggagctgaagattaccagaagatgagagagttaaagcttcaaaggctgttcaaaggatttaatctcgtctagcattgcagaagaccagaa 19237081  T
Q  127 gcatgaagtaacggctaattcaaaagaatttgaaggcattagatgcttactctttggagaacgttggaaaaggacaattgtacgaagtgtacaacaacta 226  Q
    |  ||||| |||||||| ||  |||| ||||||||||||| |||||||  ||||   ||| |||||  |||  |||||| ||||||||||||||| ||||    
T  19237082 gagtgaagcaacggctactttgaaaggatttgaaggcattggatgcttgttcttcaaagagcgttgacaaactacaattatacgaagtgtacaaccacta 19237181  T
Q  227 tctccactactctgttt 243  Q
     ||||||||||||||||    
T  19237182 cctccactactctgttt 19237198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 70 - 243
Target Start/End: Original strand, 16316538 - 16316712
Alignment:
Q  70 aagcttcaaaggttgttcaaatgttttaatcacgcctatca-ttacagaagactagaagcatgaagtaacggctaattcaaaagaatttgaaggcattag 168  Q
    ||||||||||||||||||||  | |||||||||| |||  | || |||||||| |||||  ||||| ||| |||| ||  |||| |||||||| |||| |    
T  16316538 aagcttcaaaggttgttcaatggatttaatcacgtctaagaattgcagaagaccagaagagtgaagcaacagctattttgaaaggatttgaagccattgg 16316637  T
Q  169 atgcttactctttggagaacgttggaaaaggacaattgtacgaagtgtacaacaactatctccactactctgttt 243  Q
    ||||||  |||||| ||| ||||| || || |||||||||||||||||||||| |||||||||||||||| ||||    
T  16316638 atgcttgttctttgaagagcgttgaaatagtacaattgtacgaagtgtacaaccactatctccactactcagttt 16316712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 149 - 238
Target Start/End: Complemental strand, 13880201 - 13880112
Alignment:
Q  149 aaagaatttgaaggcattagatgcttactctttggagaacgttggaaaaggacaattgtacgaagtgtacaacaactatctccactactc 238  Q
    |||| |||||||||||||||||||||| |||||| ||| |||||  |||| |||||||||||||||||||||| ||||||||||||||||    
T  13880201 aaaggatttgaaggcattagatgcttattctttgaagagcgttgacaaagtacaattgtacgaagtgtacaaccactatctccactactc 13880112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 130 - 226
Target Start/End: Original strand, 9098288 - 9098384
Alignment:
Q  130 tgaagtaacggctaattcaaaagaatttgaaggcattagatgcttactctttggagaacgttggaaaaggacaattgtacgaagtgtacaacaacta 226  Q
    ||||| ||||||||||||||||| ||||||| |||||||||| ||  |||||| ||| ||||| |||||||||||||||||||||||||||| ||||    
T  9098288 tgaagcaacggctaattcaaaaggatttgaatgcattagatgtttgttctttgaagagcgttgaaaaaggacaattgtacgaagtgtacaaccacta 9098384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 39 - 244
Target Start/End: Complemental strand, 44467273 - 44467066
Alignment:
Q  39 agctgaagatcatcagaaactgaaagaattgaagcttcaaa-ggttgttcaaatgttttaatcacgcctat-cattacagaagactagaagcatgaagta 136  Q
    |||||||| ||||||| |  || |||| || |||||||||| ||||||||||  | ||||||| || |||  |||| ||||||||||||||  ||||| |    
T  44467273 agctgaagttcatcaggagatgcaagacttaaagcttcaaaaggttgttcaatggatttaatctcgtctaagcattgcagaagactagaagagtgaagca 44467174  T
Q  137 acggctaattcaaaagaatttgaaggcattagatgcttactctttggagaacgttggaaaaggacaattgtacgaagtgtacaacaactatctccactac 236  Q
    ||| ||| ||  |||| ||||||||||||| |||||||  |||||  |||  ||||  |||| |||||||||||||||||||||| |||| |||||||||    
T  44467173 acgactattttgaaaggatttgaaggcattggatgcttgttctttaaagagtgttgacaaagtacaattgtacgaagtgtacaaccactacctccactac 44467074  T
Q  237 tctgtttt 244  Q
    ||||||||    
T  44467073 tctgtttt 44467066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 70 - 243
Target Start/End: Complemental strand, 13302987 - 13302813
Alignment:
Q  70 aagcttcaaaggttgttcaaatgttttaatcacgcctat-cattacagaagactagaagcatgaagtaacggctaattcaaaagaatttgaaggcattag 168  Q
    ||||||||||||||||||||  | ||||||  || |||  ||||  |||||||||||||  ||||| |||| ||| ||  |||| |||||||||||||||    
T  13302987 aagcttcaaaggttgttcaatggatttaatatcgtctaagcattgtagaagactagaagagtgaagcaacgactattttgaaaggatttgaaggcattag 13302888  T
Q  169 atgcttactctttggagaacgttggaaaaggacaattgtacgaagtgtacaacaactatctccactactctgttt 243  Q
    ||||||  |||||| ||| |||||  |||| |||||||||| ||||||||||| |||||| ||||||||| ||||    
T  13302887 atgcttgttctttgaagagcgttgacaaagtacaattgtacaaagtgtacaaccactatcaccactactcagttt 13302813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 27 - 243
Target Start/End: Original strand, 10883111 - 10883328
Alignment:
Q  27 aagatcatcaggagctgaagatcatcagaaactgaaagaattgaagcttcaaaggttgttcaaatgttttaatcacgccta-tcattacagaagactaga 125  Q
    ||||||| ||| ||||| || ||||||| |  || |||| || ||| ||||||||||||||||  | ||||||| || ||| ||||| ||||||||| ||    
T  10883111 aagatcaccagaagctgtagttcatcaggagatgcaagacttaaagtttcaaaggttgttcaatggatttaatctcgtctaatcatttcagaagactgga 10883210  T
Q  126 agcatgaagtaacggctaattcaaaagaatttgaaggcattagatgcttactctttggagaacgttggaaaaggacaattgtacgaagtgtacaacaact 225  Q
    ||  ||||| |||| ||| ||  |||| ||||||||||||| ||||| |  |||||| ||| |||||  |||| |||||||||||||||||||||  |||    
T  10883211 agagtgaagcaacgactattttgaaaggatttgaaggcattggatgcctgttctttgaagagcgttgacaaagtacaattgtacgaagtgtacaatcact 10883310  T
Q  226 atctccactactctgttt 243  Q
    | ||||||||||| ||||    
T  10883311 acctccactactcagttt 10883328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 27 - 243
Target Start/End: Complemental strand, 21695621 - 21695404
Alignment:
Q  27 aagatcatcaggagctgaagatcatcagaaactgaaagaattgaagcttcaaaggttgttcaaatgttttaatcacgcctat-cattacagaagactaga 125  Q
    ||||||| ||| |||||||| ||||||  |  || |||| || |||||||||| |||||||||  | ||||||| || |||  |||| |||||||| |||    
T  21695621 aagatcaccagaagctgaagttcatcaagagatgcaagacttaaagcttcaaaagttgttcaatggatttaatctcgtctaagcattgcagaagaccaga 21695522  T
Q  126 agcatgaagtaacggctaattcaaaagaatttgaaggcattagatgcttactctttggagaacgttggaaaaggacaattgtacgaagtgtacaacaact 225  Q
    ||  ||||| |||| ||| |||||||  ||||||||||||| |||||||  |||||| ||| |||||  |||| |||||||||||||||||||||| | |    
T  21695521 agagtgaagcaacgactatttcaaaatgatttgaaggcattggatgcttgttctttgaagagcgttgacaaagtacaattgtacgaagtgtacaaccagt 21695422  T
Q  226 atctccactactctgttt 243  Q
    | ||| ||||||| ||||    
T  21695421 acctcaactactcagttt 21695404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 149 - 243
Target Start/End: Original strand, 2913669 - 2913763
Alignment:
Q  149 aaagaatttgaaggcattagatgcttactctttggagaacgttggaaaaggacaattgtacgaagtgtacaacaactatctccactactctgttt 243  Q
    |||| ||||||||||||| |||||||  |||||| ||| |||||  |||| |||||||||||||||||||||| |||||||||||||||| ||||    
T  2913669 aaaggatttgaaggcattggatgcttgttctttgaagagcgttgacaaagtacaattgtacgaagtgtacaaccactatctccactactcagttt 2913763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 77 - 243
Target Start/End: Original strand, 13018494 - 13018660
Alignment:
Q  77 aaaggttgttcaaatgttttaatcacgcctatcattacagaagactagaagcatgaagtaacggctaattcaaaagaatttgaaggcattagatgcttac 176  Q
    ||||| |||||||  | |||||||||||| |  ||| ||||||||||| ||  ||||| |||| ||| || ||| ||| ||||||||||| ||||||       
T  13018494 aaaggctgttcaatggatttaatcacgcccagtattgcagaagactaggagagtgaagcaacgactattttaaatgaagttgaaggcattggatgctgga 13018593  T
Q  177 tctttggagaacgttggaaaaggacaattgtacgaagtgtacaacaactatctccactactctgttt 243  Q
    | |||| ||| |||||  |||| |||||||||||||||||||||| |||||||||||||||| ||||    
T  13018594 tttttgaagagcgttgacaaagtacaattgtacgaagtgtacaaccactatctccactactcagttt 13018660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 70 - 243
Target Start/End: Original strand, 13730656 - 13730830
Alignment:
Q  70 aagcttcaaaggttgttcaaatgttttaatcacgcctat-cattacagaagactagaagcatgaagtaacggctaattcaaaagaatttgaaggcattag 168  Q
    ||||||||||||||||||||  | ||||||| || |||  |||| || ||||||| |||  ||||| |||||||| ||  |||  ||||||| ||||| |    
T  13730656 aagcttcaaaggttgttcaatggatttaatctcgtctaagcattgcataagactaaaagagtgaagcaacggctattttgaaaagatttgaatgcattgg 13730755  T
Q  169 atgcttactctttggagaacgttggaaaaggacaattgtacgaagtgtacaacaactatctccactactctgttt 243  Q
    ||||||  |||||| ||| |||||  |||| |||||||||||||||||||||| | |||||||||||||| ||||    
T  13730756 atgcttgttctttgaagagcgttgacaaagtacaattgtacgaagtgtacaaccattatctccactactcagttt 13730830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 159 - 264
Target Start/End: Complemental strand, 16412078 - 16411974
Alignment:
Q  159 aaggcattagatgcttactctttggagaacgttggaaaaggacaattgtacgaagtgtacaacaactatctccactactctgttttgtgtatgcaatagt 258  Q
    |||||||| |||||||| |||||| ||| |||| |||||||||||| |||| || |||||||| | ||||||||||||||| | |||||| |||||||||    
T  16412078 aaggcattggatgcttattctttgaagagcgttcgaaaaggacaatagtac-aattgtacaaccattatctccactactctatgttgtgtctgcaatagt 16411980  T
Q  259 acaaga 264  Q
    ||||||    
T  16411979 acaaga 16411974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 136 - 244
Target Start/End: Original strand, 23280006 - 23280114
Alignment:
Q  136 aacggctaattcaaaagaatttgaaggcattagatgcttactctttggagaacgttggaaaaggacaattgtacgaagtgtacaacaactatctccacta 235  Q
    |||||||| ||  |||| ||||||||||||| |||||||  ||||   ||| |||||  |||| |||||||||||||||||||||| |||||||||||||    
T  23280006 aacggctagtttgaaaggatttgaaggcattggatgcttgttcttcaaagagcgttgacaaagtacaattgtacgaagtgtacaaccactatctccacta 23280105  T
Q  236 ctctgtttt 244  Q
    |||||||||    
T  23280106 ctctgtttt 23280114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 74 - 237
Target Start/End: Original strand, 29935344 - 29935507
Alignment:
Q  74 ttcaaaggttgttcaaatgttttaatcacgcctatcattacagaagactagaagcatgaagtaacggctaattcaaaagaatttgaaggcattagatgct 173  Q
    ||||||||||||||||    ||||||||| | || |||| |||||||| |||||  ||||| |||| ||| ||  |||| ||||||| ||||| ||||||    
T  29935344 ttcaaaggttgttcaatatatttaatcacacttaacattgcagaagaccagaagagtgaagcaacgactattttgaaaggatttgaaagcattggatgct 29935443  T
Q  174 tactctttggagaacgttggaaaaggacaattgtacgaagtgtacaacaactatctccactact 237  Q
    |  |||||  ||| |||||  | || |||||||||||||||||||||| |||||||||||||||    
T  29935444 tgttctttaaagagcgttgacatagtacaattgtacgaagtgtacaaccactatctccactact 29935507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 70 - 243
Target Start/End: Complemental strand, 15088697 - 15088523
Alignment:
Q  70 aagcttcaaaggttgttcaaatgttttaatcacgcctat-cattacagaagactagaagcatgaagtaacggctaattcaaaagaatttgaaggcattag 168  Q
    |||||||||||| |||||||  | ||||||| || |||  |||| |||||||||  |||  ||||| |||| ||| ||  |||| |||||||| |||| |    
T  15088697 aagcttcaaaggctgttcaatggatttaatctcgtctaagcattgcagaagactgaaagagtgaagcaacgactattttgaaaggatttgaagacattgg 15088598  T
Q  169 atgcttactctttggagaacgttggaaaaggacaattgtacgaagtgtacaacaactatctccactactctgttt 243  Q
    ||||||  |||||  ||| |||||  |||| |||||||||||||||||||||| |||||||||||||||| ||||    
T  15088597 atgcttgttcttttaagagcgttgacaaagtacaattgtacgaagtgtacaaccactatctccactactcagttt 15088523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 150 - 244
Target Start/End: Original strand, 16111946 - 16112040
Alignment:
Q  150 aagaatttgaaggcattagatgcttactctttggagaacgttggaaaaggacaattgtacgaagtgtacaacaactatctccactactctgtttt 244  Q
    ||||| ||||||||||| |||||||  ||||   ||| |||||  |||| |||||||||||||||||||||| ||||||||||||||||||||||    
T  16111946 aagaaattgaaggcattggatgcttgttcttcaaagagcgttgacaaagtacaattgtacgaagtgtacaaccactatctccactactctgtttt 16112040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 27 - 244
Target Start/End: Original strand, 21283311 - 21283529
Alignment:
Q  27 aagatcatcaggagctgaagatcatcagaaactgaaagaattgaagcttcaaaggttgttcaaatgttttaatcacgcctat-cattacagaagactaga 125  Q
    ||||||| ||| || ||||| ||||||| |  || |||| || ||||||||||||||||||||  | ||||||| || |||  |||| ||||||||| ||    
T  21283311 aagatcaccagaagttgaagttcatcaggatatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctaagcattgcagaagactgga 21283410  T
Q  126 agcatgaagtaacggctaattcaaaagaatttgaaggcattagatgcttactctttggagaacgttggaaaaggacaattgtacgaagtgtacaacaact 225  Q
    ||  | ||| |||| | | ||  |||| ||||||||||||| |||||||  | ||   ||| |||||  |||| |||||||||||||||||||||| |||    
T  21283411 agagtaaagcaacgtccattttgaaaggatttgaaggcattggatgcttgttattcaaagagcgttgacaaagtacaattgtacgaagtgtacaaccact 21283510  T
Q  226 atctccactactctgtttt 244  Q
    | |||||||||||||||||    
T  21283511 acctccactactctgtttt 21283529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 154 - 243
Target Start/End: Original strand, 13137961 - 13138050
Alignment:
Q  154 atttgaaggcattagatgcttactctttggagaacgttggaaaaggacaattgtacgaagtgtacaacaactatctccactactctgttt 243  Q
    ||||||||||||| |||||||  |||||| ||| |||||  |||| |||||||||||||||||||||| |||||||||| ||||| ||||    
T  13137961 atttgaaggcattggatgcttgttctttgaagagcgttgacaaagtacaattgtacgaagtgtacaaccactatctccattactcagttt 13138050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 72 - 244
Target Start/End: Complemental strand, 28409214 - 28409041
Alignment:
Q  72 gcttcaaaggttgttcaaatgttttaatcacgcctat-cattacagaagactagaagcatgaagtaacggctaattcaaaagaatttgaaggcattagat 170  Q
    ||||||||||||||||||  | ||||||| || |||  |||| ||||||||||||||  ||||| |||   || ||  |||| ||||||||||||| |||    
T  28409214 gcttcaaaggttgttcaatggatttaatctcgtctaaacattgcagaagactagaagagtgaagcaacaattattttgaaaggatttgaaggcattggat 28409115  T
Q  171 gcttactctttggagaacgttggaaaaggacaattgtacgaagtgtacaacaactatctccactactctgtttt 244  Q
    | ||  ||||   ||| |||||  |||| |||||||||||||||||||||| |||| |||||||||||||||||    
T  28409114 gtttgttcttcaaagagcgttgacaaagtacaattgtacgaagtgtacaaccactacctccactactctgtttt 28409041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 70 - 229
Target Start/End: Original strand, 13032053 - 13032213
Alignment:
Q  70 aagcttcaaa-ggttgttcaaatgttttaatcacgcctatcattacagaagactagaagcatgaagtaacggctaattcaaaagaatttgaaggcattag 168  Q
    |||||||||| ||||||||||  | ||||||||||||||  ||| |||||||| || ||  ||||| |||  ||| |||||| ||| |||||| ||||||    
T  13032053 aagcttcaaatggttgttcaatggatttaatcacgcctagtattgcagaagaccaggagagtgaagcaacaactatttcaaatgaagttgaagacattag 13032152  T
Q  169 atgcttactctttggagaacgttggaaaaggacaattgtacgaagtgtacaacaactatct 229  Q
    |||||  || |||| ||| |||||  |||| | |||||||||||||||||||| |||||||    
T  13032153 atgctggctttttgaagagcgttgacaaagtataattgtacgaagtgtacaaccactatct 13032213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 149 - 244
Target Start/End: Original strand, 30944384 - 30944479
Alignment:
Q  149 aaagaatttgaaggcattagatgcttactctttggagaacgttggaaaaggacaattgtacgaagtgtacaacaactatctccactactctgtttt 244  Q
    |||| ||||||||||||| |||||||| ||||   ||| |||||  |||  |||||||||||||||||||||| |||| |||||||||||||||||    
T  30944384 aaaggatttgaaggcattggatgcttattcttcaaagagcgttgacaaaatacaattgtacgaagtgtacaaccactacctccactactctgtttt 30944479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 109 - 244
Target Start/End: Original strand, 33691733 - 33691868
Alignment:
Q  109 cattacagaagactagaagcatgaagtaacggctaattcaaaagaatttgaaggcattagatgcttactctttggagaacgttggaaaaggacaattgta 208  Q
    |||| ||||||||| ||||  ||||| |||| ||| ||  ||||||||| ||||| ||||||||||  ||||   ||| |||||  |||| |||||||||    
T  33691733 cattgcagaagactggaagagtgaagcaacgactattttgaaagaatttaaaggcgttagatgcttgttcttcaaagagcgttgacaaagtacaattgta 33691832  T
Q  209 cgaagtgtacaacaactatctccactactctgtttt 244  Q
    ||||||||| ||| |||| |||||||||||||||||    
T  33691833 cgaagtgtataaccactacctccactactctgtttt 33691868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 149 - 244
Target Start/End: Original strand, 48236963 - 48237058
Alignment:
Q  149 aaagaatttgaaggcattagatgcttactctttggagaacgttggaaaaggacaattgtacgaagtgtacaacaactatctccactactctgtttt 244  Q
    |||| |||||||||||| ||||||||| ||||   ||| |||||  |||| |||||||||||||||||||||| |||| |||||||||| ||||||    
T  48236963 aaaggatttgaaggcatcagatgcttattcttcaaagagcgttgacaaagtacaattgtacgaagtgtacaaccactacctccactactttgtttt 48237058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 110 - 244
Target Start/End: Complemental strand, 4821609 - 4821476
Alignment:
Q  110 attacagaagactagaagcatgaagtaacggctaattcaaaagaatttgaaggcattagatgcttactctttggagaacgttggaaaaggacaattgtac 209  Q
    |||||||||||||||||   || || |||||||| ||  ||||| |||||||||||| |||||||  ||||   ||| ||||| ||||| ||  ||||||    
T  4821609 attacagaagactagaaaagtggagcaacggctattttgaaaga-tttgaaggcattggatgcttgttcttcaaagagcgttgaaaaagtacgtttgtac 4821511  T
Q  210 gaagtgtacaacaactatctccactactctgtttt 244  Q
    |||||||||||| |||| |||||||||||||||||    
T  4821510 gaagtgtacaaccactacctccactactctgtttt 4821476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 149 - 243
Target Start/End: Original strand, 5000883 - 5000977
Alignment:
Q  149 aaagaatttgaaggcattagatgcttactctttggagaacgttggaaaaggacaattgtacgaagtgtacaacaactatctccactactctgttt 243  Q
    |||| ||||||| |||||  ||||||  |||||| |||||||||  | || |||||||||||||||||||||| |||||||||||||||| ||||    
T  5000883 aaaggatttgaaagcattgaatgcttgttctttgaagaacgttgacatagtacaattgtacgaagtgtacaaccactatctccactactcagttt 5000977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 24 - 233
Target Start/End: Complemental strand, 11793130 - 11792920
Alignment:
Q  24 ctaaagatcatcaggagctgaagatcatcagaaactgaaagaattgaagcttcaaaggttgttcaaatgttttaatcacgcctat-cattacagaagact 122  Q
    |||||||||| ||| |||||||| ||||||| |  || |||| || |||||| |||||||||||||  |  |||||| || |||  |||| |  |||||     
T  11793130 ctaaagatcaccagaagctgaagttcatcaggagatgcaagacttaaagctttaaaggttgttcaatggacttaatctcgtctaagcattgcgaaagacc 11793031  T
Q  123 agaagcatgaagtaacggctaattcaaaagaatttgaaggcattagatgcttactctttggagaacgttggaaaaggacaattgtacgaagtgtacaaca 222  Q
    | |||  ||||| |||| ||| ||  |||| ||||||| ||||| |||||||  |||||| ||| |||||  |||| ||||||||||||||||||||||     
T  11793030 ataagagtgaagcaacgactattttgaaagcatttgaaagcatttgatgcttgttctttgaagagcgttgacaaagtacaattgtacgaagtgtacaacc 11792931  T
Q  223 actatctccac 233  Q
    |||||||||||    
T  11792930 actatctccac 11792920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 149 - 243
Target Start/End: Original strand, 16309968 - 16310062
Alignment:
Q  149 aaagaatttgaaggcattagatgcttactctttggagaacgttggaaaaggacaattgtacgaagtgtacaacaactatctccactactctgttt 243  Q
    |||| ||||||||||||| |||||||  |||||| ||| |||||  | || |||||||||||||||||||||| ||||||| |||||||| ||||    
T  16309968 aaaggatttgaaggcattggatgcttgttctttgaagagcgttgacatagtacaattgtacgaagtgtacaaccactatctacactactcagttt 16310062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 149 - 243
Target Start/End: Complemental strand, 21692384 - 21692290
Alignment:
Q  149 aaagaatttgaaggcattagatgcttactctttggagaacgttggaaaaggacaattgtacgaagtgtacaacaactatctccactactctgttt 243  Q
    |||| ||||||||||||| |||||||  |||||| ||| |||||  |||| ||||||||| |||||||||||| |||| ||||||||||| ||||    
T  21692384 aaaggatttgaaggcattggatgcttgttctttgaagagcgttgacaaagtacaattgtatgaagtgtacaaccactacctccactactcagttt 21692290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 109 - 238
Target Start/End: Complemental strand, 13648866 - 13648737
Alignment:
Q  109 cattacagaagactagaagcatgaagtaacggctaattcaaaagaatttgaaggcattagatgcttactctttggagaacgttggaaaaggacaattgta 208  Q
    |||| |||||||||  |||  ||||| |||||||| ||  |||| |||| ||| |||| |||||||  |||||| ||| |||||  | || |||||||||    
T  13648866 cattgcagaagactgaaagagtgaagcaacggctattttgaaaggatttaaagacattggatgcttgatctttgaagagcgttgacatagtacaattgta 13648767  T
Q  209 cgaagtgtacaacaactatctccactactc 238  Q
    ||||||||||||| ||||||||||||||||    
T  13648766 cgaagtgtacaaccactatctccactactc 13648737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 193 - 261
Target Start/End: Original strand, 7488011 - 7488078
Alignment:
Q  193 gaaaaggacaattgtacgaagtgtacaacaactatctccactactctgttttgtgtatgcaatagtaca 261  Q
    |||||||| ||| |||| || |||||||| |||||||||||||||||||||||| ||||||||||||||    
T  7488011 gaaaaggaaaatagtac-aactgtacaaccactatctccactactctgttttgtatatgcaatagtaca 7488078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 70 - 243
Target Start/End: Complemental strand, 2500215 - 2500041
Alignment:
Q  70 aagcttcaaaggttgttcaaatgttttaatcacgcctat-cattacagaagactagaagcatgaagtaacggctaattcaaaagaatttgaaggcattag 168  Q
    |||||||||| |||||||||  | ||||||| || |||  |||| ||||||||| ||||  ||||| |||  ||| ||  |||| ||||||| ||||| |    
T  2500215 aagcttcaaatgttgttcaatggatttaatctcgtctaagcattgcagaagactggaagagtgaagcaacaactattttgaaaggatttgaaagcattgg 2500116  T
Q  169 atgcttactctttggagaacgttggaaaaggacaattgtacgaagtgtacaacaactatctccactactctgttt 243  Q
    |||||||  ||||| |||  ||||  |||| |||||||||| ||||||||||| ||| |||||||||||| ||||    
T  2500115 atgcttatcctttgaagagagttgacaaagtacaattgtacaaagtgtacaaccactttctccactactcagttt 2500041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 27 - 244
Target Start/End: Original strand, 22577959 - 22578177
Alignment:
Q  27 aagatcatcaggagctgaagatcatcagaaactgaaagaattgaagcttcaaaggttgttcaaatgttttaatcacgcctat-cattacagaagactaga 125  Q
    ||||||| ||| |||||||| ||||||| |  || |||| || |||||||||||| |||||||  | ||||||| ||  ||  |||| |||||||||  |    
T  22577959 aagatcaccagaagctgaagttcatcaggagatgcaagacttaaagcttcaaagggtgttcaatagatttaatctcgtttaagcattgcagaagactgta 22578058  T
Q  126 agcatgaagtaacggctaattcaaaagaatttgaaggcattagatgcttactctttggagaacgttggaaaaggacaattgtacgaagtgtacaacaact 225  Q
    ||  ||||| |||  ||| ||  |||| |||||||||||||  ||| ||  ||||   ||| |||||  |||| |||||||||||||||||||||| |||    
T  22578059 agagtgaagcaacaactattttgaaaggatttgaaggcattgaatgattgttcttaaaagagcgttgacaaagtacaattgtacgaagtgtacaaccact 22578158  T
Q  226 atctccactactctgtttt 244  Q
    | |||||||||||||||||    
T  22578159 acctccactactctgtttt 22578177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 27 - 244
Target Start/End: Complemental strand, 24788361 - 24788143
Alignment:
Q  27 aagatcatcaggagctgaagatcatcagaaactgaaagaattgaagcttcaaaggttgttcaaatgttttaatcacgcctat-cattacagaagactaga 125  Q
    ||||||| ||| |||||||| |||| || |  || |||| || ||||||||||||||||||||  | ||||||  |  |||  |||| ||||||||||||    
T  24788361 aagatcaccagaagctgaagttcattaggagatgcaagacttaaagcttcaaaggttgttcaatagatttaatatcatctaagcattgcagaagactaga 24788262  T
Q  126 agcatgaagtaacggctaattcaaaagaatttgaaggcattagatgcttactctttggagaacgttggaaaaggacaattgtacgaagtgtacaacaact 225  Q
    ||  ||||| ||||  || ||  |||| ||||||||||||| | |||||  ||||   |||   |||  |||| |||||||||||||||||||||| |||    
T  24788261 agagtgaagcaacgaatattttgaaaggatttgaaggcattgggtgcttgttcttcaaagagaattgacaaagtacaattgtacgaagtgtacaaccact 24788162  T
Q  226 atctccactactctgtttt 244  Q
    | |||||||||||||||||    
T  24788161 acctccactactctgtttt 24788143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 204 - 244
Target Start/End: Complemental strand, 1293072 - 1293032
Alignment:
Q  204 ttgtacgaagtgtacaacaactatctccactactctgtttt 244  Q
    |||||||||||||||||| ||||||||||||||||||||||    
T  1293072 ttgtacgaagtgtacaaccactatctccactactctgtttt 1293032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 204 - 244
Target Start/End: Complemental strand, 14425489 - 14425449
Alignment:
Q  204 ttgtacgaagtgtacaacaactatctccactactctgtttt 244  Q
    |||||||||||||||||| ||||||||||||||||||||||    
T  14425489 ttgtacgaagtgtacaaccactatctccactactctgtttt 14425449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 205 - 244
Target Start/End: Complemental strand, 8182971 - 8182932
Alignment:
Q  205 tgtacgaagtgtacaacaactatctccactactctgtttt 244  Q
    ||||||||||||||||| ||||||||||||||||||||||    
T  8182971 tgtacgaagtgtacaaccactatctccactactctgtttt 8182932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 31 - 90
Target Start/End: Original strand, 9098201 - 9098260
Alignment:
Q  31 tcatcaggagctgaagatcatcagaaactgaaagaattgaagcttcaaaggttgttcaaa 90  Q
    ||||||| ||||||||||||||||||  ||| |||||| |||||||||||| ||||||||    
T  9098201 tcatcagaagctgaagatcatcagaagatgagagaattaaagcttcaaaggctgttcaaa 9098260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 70 - 240
Target Start/End: Complemental strand, 15468093 - 15467922
Alignment:
Q  70 aagcttcaaaggttgttcaaatgttttaatcacgcctat-cattacagaagactagaagcatgaagtaacggctaattcaaaagaatttgaaggcattag 168  Q
    |||||||||||| |||||||  | ||||||| || |||  || | ||||||||| ||||  ||||  |||| ||| || ||||| ||||||||||||| |    
T  15468093 aagcttcaaagggtgttcaatagatttaatctcgtctaggcaatgcagaagactggaagagtgaatcaacgactattttaaaaggatttgaaggcattgg 15467994  T
Q  169 atgcttactctttggagaacgttggaaaaggacaattgtacgaagtgtacaacaactatctccactactctg 240  Q
    ||||||  ||||   ||| |||||  |||| |||||||||||| ||||||||| | || |||||||||||||    
T  15467993 atgcttgttcttcaaagagcgttgacaaagtacaattgtacgaggtgtacaaccattacctccactactctg 15467922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 156 - 243
Target Start/End: Complemental strand, 30025995 - 30025908
Alignment:
Q  156 ttgaaggcattagatgcttactctttggagaacgttggaaaaggacaattgtacgaagtgtacaacaactatctccactactctgttt 243  Q
    ||||||||||| |||||||  |||||  ||| |||||  |||| |||||||||||||||||||||| | |||||| ||||||| ||||    
T  30025995 ttgaaggcattcgatgcttgttcttttaagagcgttgacaaagtacaattgtacgaagtgtacaaccaatatctctactactcagttt 30025908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 149 - 244
Target Start/End: Original strand, 30945417 - 30945512
Alignment:
Q  149 aaagaatttgaaggcattagatgcttactctttggagaacgttggaaaaggacaattgtacgaagtgtacaacaactatctccactactctgtttt 244  Q
    |||| ||||||||||||| |||||||  || |   ||| |||||  |||| |||||||||||||||||||||| |||| |||||||||| ||||||    
T  30945417 aaaggatttgaaggcattggatgcttgttcctcaaagagcgttgacaaagtacaattgtacgaagtgtacaaccactacctccactactttgtttt 30945512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 195 - 244
Target Start/End: Complemental strand, 9069613 - 9069564
Alignment:
Q  195 aaaggacaattgtacgaagtgtacaacaactatctccactactctgtttt 244  Q
    |||| |||||||||||||||||||||| |||| ||||||||||| |||||    
T  9069613 aaagtacaattgtacgaagtgtacaaccactacctccactactcagtttt 9069564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 200 - 236
Target Start/End: Original strand, 13260727 - 13260763
Alignment:
Q  200 acaattgtacgaagtgtacaacaactatctccactac 236  Q
    |||||||||||||||||||||| ||||||||||||||    
T  13260727 acaattgtacgaagtgtacaaccactatctccactac 13260763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 204 - 244
Target Start/End: Original strand, 19711129 - 19711169
Alignment:
Q  204 ttgtacgaagtgtacaacaactatctccactactctgtttt 244  Q
    |||||||||||||||||| ||||| ||||||||||||||||    
T  19711129 ttgtacgaagtgtacaaccactatttccactactctgtttt 19711169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 204 - 244
Target Start/End: Complemental strand, 27871760 - 27871720
Alignment:
Q  204 ttgtacgaagtgtacaacaactatctccactactctgtttt 244  Q
    |||||||||||||||||| |||| |||||||||||||||||    
T  27871760 ttgtacgaagtgtacaaccactacctccactactctgtttt 27871720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 109 - 244
Target Start/End: Original strand, 9709823 - 9709958
Alignment:
Q  109 cattacagaagactagaagcatgaagtaacggctaattcaaaagaatttgaaggcattagatgcttactctttggagaacgttggaaaaggacaattgta 208  Q
    |||| ||||||||| ||||  ||||| |||| ||| ||  |||| |||||||||||||||||||||  ||||   ||| |||||  | || |||| ||||    
T  9709823 cattgcagaagactggaagagtgaagcaacgcctagtttgaaaggatttgaaggcattagatgcttgttcttcaaagagcgttgacatagtacaactgta 9709922  T
Q  209 cgaagtgtacaacaactatctccactactctgtttt 244  Q
    ||||||||| ||| ||||  |||||| |||||||||    
T  9709923 cgaagtgtaaaaccactacatccactgctctgtttt 9709958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 200 - 243
Target Start/End: Complemental strand, 11319451 - 11319408
Alignment:
Q  200 acaattgtacgaagtgtacaacaactatctccactactctgttt 243  Q
    ||||||| |||||||||||||| |||||||||||||||| ||||    
T  11319451 acaattgcacgaagtgtacaaccactatctccactactcagttt 11319408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 149 - 244
Target Start/End: Complemental strand, 14426644 - 14426549
Alignment:
Q  149 aaagaatttgaaggcattagatgcttactctttggagaacgttggaaaaggacaattgtacgaagtgtacaacaactatctccactactctgtttt 244  Q
    |||| ||||||||||||| |||||||  ||||   ||| |||||  |||| ||  |||||| ||||||||||| |||| |||||||||||||||||    
T  14426644 aaaggatttgaaggcattggatgcttgttcttcaaagagcgttgacaaagtacgtttgtactaagtgtacaaccactacctccactactctgtttt 14426549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 149 - 244
Target Start/End: Complemental strand, 33605782 - 33605687
Alignment:
Q  149 aaagaatttgaaggcattagatgcttactctttggagaacgttggaaaaggacaattgtacgaagtgtacaacaactatctccactactctgtttt 244  Q
    |||| ||||||||||||| |||||||  ||||   ||| |||||  |||| || ||||||||||||||||||| |||| || ||||||| ||||||    
T  33605782 aaaggatttgaaggcattggatgcttgttcttcaaagagcgttgacaaagtacgattgtacgaagtgtacaaccactaccttcactactatgtttt 33605687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 204 - 246
Target Start/End: Original strand, 2265635 - 2265677
Alignment:
Q  204 ttgtacgaagtgtacaacaactatctccactactctgttttgt 246  Q
    |||||||||||||||||| |||| ||||||| |||||||||||    
T  2265635 ttgtacgaagtgtacaaccactacctccactgctctgttttgt 2265677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 195 - 244
Target Start/End: Complemental strand, 4494628 - 4494579
Alignment:
Q  195 aaaggacaattgtacgaagtgtacaacaactatctccactactctgtttt 244  Q
    |||| ||||||||||||||||||||||  ||| |||||||||||| ||||    
T  4494628 aaagtacaattgtacgaagtgtacaaccgctacctccactactctctttt 4494579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 195 - 244
Target Start/End: Complemental strand, 14193165 - 14193116
Alignment:
Q  195 aaaggacaattgtacgaagtgtacaacaactatctccactactctgtttt 244  Q
    |||| |||| ||||||||||||||||| |||| ||| |||||||||||||    
T  14193165 aaagtacaagtgtacgaagtgtacaaccactacctctactactctgtttt 14193116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 211 - 244
Target Start/End: Original strand, 14745750 - 14745783
Alignment:
Q  211 aagtgtacaacaactatctccactactctgtttt 244  Q
    ||||||||||| ||||||||||||||||||||||    
T  14745750 aagtgtacaaccactatctccactactctgtttt 14745783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 204 - 240
Target Start/End: Original strand, 19339366 - 19339402
Alignment:
Q  204 ttgtacgaagtgtacaacaactatctccactactctg 240  Q
    |||||||||||||||||| |||| |||||||||||||    
T  19339366 ttgtacgaagtgtacaaccactacctccactactctg 19339402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 204 - 244
Target Start/End: Original strand, 24794831 - 24794871
Alignment:
Q  204 ttgtacgaagtgtacaacaactatctccactactctgtttt 244  Q
    |||||||||||||||||| ||||  ||||||||||||||||    
T  24794831 ttgtacgaagtgtacaaccactacttccactactctgtttt 24794871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 204 - 244
Target Start/End: Original strand, 35952804 - 35952844
Alignment:
Q  204 ttgtacgaagtgtacaacaactatctccactactctgtttt 244  Q
    |||||||||||||||||| |||| ||||| |||||||||||    
T  35952804 ttgtacgaagtgtacaaccactacctccattactctgtttt 35952844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 98; Significance: 2e-48; HSPs: 3)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 39 - 264
Target Start/End: Original strand, 36084 - 36308
Alignment:
Q  39 agctgaagatcatcagaaactgaaagaattgaagcttcaaaggttgttcaaatgttttaatcacgcctatcattacagaagactagaagcatgaagtaac 138  Q
    |||||||||||||||||| |||| | ||||||||||||||||||||||||| || |||||||||| |||||||| ||||||||| |||| |||||| |||    
T  36084 agctgaagatcatcagaatctgagaaaattgaagcttcaaaggttgttcaattgatttaatcacgtctatcattgcagaagactggaagaatgaagcaac 36183  T
Q  139 ggctaattcaaaagaatttgaaggcattagatgcttactctttggagaacgttggaaaaggacaattgtacgaagtgtacaacaactatctccactactc 238  Q
      ||| |||||| |  ||| |||||||| |||||||  || |||||||  |||| ||| |||||||||||||||||||||||| |||||||||||||| |    
T  36184 aactatttcaaatggttttaaaggcattggatgctttttcgttggagagagttgaaaatggacaattgtacgaagtgtacaaccactatctccactac-c 36282  T
Q  239 tgttttgtgtatgcaatagtacaaga 264  Q
    || ||| ||| |||||||| ||||||    
T  36283 tgatttttgtctgcaataggacaaga 36308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 204 - 244
Target Start/End: Original strand, 25730 - 25770
Alignment:
Q  204 ttgtacgaagtgtacaacaactatctccactactctgtttt 244  Q
    |||||||||||||||||| |||| |||||||||||||||||    
T  25730 ttgtacgaagtgtacaaccactacctccactactctgtttt 25770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 204 - 244
Target Start/End: Original strand, 34869 - 34909
Alignment:
Q  204 ttgtacgaagtgtacaacaactatctccactactctgtttt 244  Q
    ||||| |||||||||||| |||| |||||||||||||||||    
T  34869 ttgtatgaagtgtacaaccactacctccactactctgtttt 34909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081 (Bit Score: 95; Significance: 2e-46; HSPs: 1)
Name: scaffold0081
Description:

Target: scaffold0081; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 41 - 243
Target Start/End: Complemental strand, 40846 - 40644
Alignment:
Q  41 ctgaagatcatcagaaactgaaagaattgaagcttcaaaggttgttcaaatgttttaatcacgcctatcattacagaagactagaagcatgaagtaacgg 140  Q
    ||||||||||||||||  ||| ||||||||||||||||||| |||||||| | ||||||||| |||| |||| |||||||| |||||  ||||| |||||    
T  40846 ctgaagatcatcagaagatgagagaattgaagcttcaaaggctgttcaaaagatttaatcacacctagcattgcagaagaccagaagagtgaagcaacgg 40747  T
Q  141 ctaattcaaaagaatttgaaggcattagatgcttactctttggagaacgttggaaaaggacaattgtacgaagtgtacaacaactatctccactactctg 240  Q
    |||||||||||||||||||||||||  |||| |   |||||| ||| ||||| ||||| ||||||||| |||||||||||| |||| || ||||||||||    
T  40746 ctaattcaaaagaatttgaaggcatatgatggtggttctttgaagagcgttgaaaaagaacaattgtaagaagtgtacaaccactaccttcactactctg 40647  T
Q  241 ttt 243  Q
    |||    
T  40646 ttt 40644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 95; Significance: 2e-46; HSPs: 42)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 106 - 264
Target Start/End: Complemental strand, 16607651 - 16607494
Alignment:
Q  106 tatcattacagaagactagaagcatgaagtaacggctaattcaaaagaatttgaaggcattagatgcttactctttggagaacgttggaaaaggacaatt 205  Q
    ||||||| ||||||| ||||||| || || ||||||||||||| | ||||||||||||||| || ||||| ||||||||||||||||||||||||||||     
T  16607651 tatcattgcagaagaatagaagcctggagcaacggctaattcagaggaatttgaaggcattggaagcttattctttggagaacgttggaaaaggacaata 16607552  T
Q  206 gtacgaagtgtacaacaactatctccactactctgttttgtgtatgcaatagtacaaga 264  Q
    |||| ||||||||||| |||||||||||||||||| ||||||| |||||||||||||||    
T  16607551 gtac-aagtgtacaaccactatctccactactctgctttgtgtttgcaatagtacaaga 16607494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 31 - 246
Target Start/End: Original strand, 25096745 - 25096963
Alignment:
Q  31 tcatcaggagctgaagatcatcagaaactgaaagaattgaagcttcaaaggttgttcaaatgttttaatcacgcctatcattacagaagactagaagcat 130  Q
    ||||| ||||||||||||||||| ||  | | ||| || ||||||||||||||||||||| | |||||| ||||||| |||| |||||||| |||||  |    
T  25096745 tcatccggagctgaagatcatcataagataagagacttaaagcttcaaaggttgttcaaaggatttaattacgcctagcattgcagaagaccagaagagt 25096844  T
Q  131 gaagtaacggctaattcaaaagaatttgaaggcattagatgcttactctttggagaacgttg---gaaaaggacaattgtacgaagtgtacaacaactat 227  Q
    |||| ||||  ||||||||||| |||||||| |||| |||||||  |||||  ||| |||||    |||||||||||||||||||||||||||| ||||     
T  25096845 gaagcaacgattaattcaaaaggatttgaagacattggatgcttgttctttaaagagcgttgaaaaaaaaggacaattgtacgaagtgtacaaccactac 25096944  T
Q  228 ctccactactctgttttgt 246  Q
    |||||||||||||||||||    
T  25096945 ctccactactctgttttgt 25096963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 31 - 246
Target Start/End: Original strand, 25154715 - 25154933
Alignment:
Q  31 tcatcaggagctgaagatcatcagaaactgaaagaattgaagcttcaaaggttgttcaaatgttttaatcacgcctatcattacagaagactagaagcat 130  Q
    ||||| ||||||||||||||||| ||  | | ||| || ||||||||||||||||||||| | |||||| ||||||| |||| |||||||| |||||  |    
T  25154715 tcatccggagctgaagatcatcataagataagagacttaaagcttcaaaggttgttcaaaggatttaattacgcctagcattgcagaagaccagaagagt 25154814  T
Q  131 gaagtaacggctaattcaaaagaatttgaaggcattagatgcttactctttggagaacgttg---gaaaaggacaattgtacgaagtgtacaacaactat 227  Q
    |||| ||||  ||||||||||| |||||||| |||| |||||||  |||||  ||| |||||    |||||||||||||||||||||||||||| ||||     
T  25154815 gaagcaacgattaattcaaaaggatttgaagacattggatgcttgttctttaaagagcgttgaaaaaaaaggacaattgtacgaagtgtacaaccactac 25154914  T
Q  228 ctccactactctgttttgt 246  Q
    |||||||||||||||||||    
T  25154915 ctccactactctgttttgt 25154933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 30 - 243
Target Start/End: Original strand, 21198925 - 21199137
Alignment:
Q  30 atcatcaggagctgaagatcatcagaaactgaaagaattgaagcttcaaaggttgttcaaatgttttaatcacgcctatcattacagaagactagaagca 129  Q
    |||| |||||||||||| |||||||||  ||| ||| || ||||||||||||||||||||| | ||||||||||||||  | | |||||||| ||||  |    
T  21198925 atcaccaggagctgaagttcatcagaagatgagagacttaaagcttcaaaggttgttcaaaggatttaatcacgcctagtactgcagaagaccagaaaaa 21199024  T
Q  130 tgaagtaacggctaattcaaaagaatttgaaggcattagatgcttactctttggagaacgttggaaaaggacaattgtacgaagtgtacaacaactatct 229  Q
    ||| | ||||||||||||||| ||||||||||||||| ||||||   |||||||| | |||||  |||| |||||||||||||||||||||  |||| ||    
T  21199025 tga-gcaacggctaattcaaatgaatttgaaggcattggatgctcgttctttggaaagcgttgacaaagtacaattgtacgaagtgtacaatcactacct 21199123  T
Q  230 ccactactctgttt 243  Q
    ||||||||| ||||    
T  21199124 ccactactcagttt 21199137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 48 - 239
Target Start/End: Original strand, 642646 - 642837
Alignment:
Q  48 tcatcagaaactgaaagaattgaagcttcaaaggttgttcaaatgttttaatcacgcctatcattacagaagactagaagcatgaagtaacggctaattc 147  Q
    |||||||||  ||| ||| || ||||||||||||||||||||  | ||||||||| |||| ||||||||||||  || ||  ||||  ||||||||||||    
T  642646 tcatcagaagatgagagacttaaagcttcaaaggttgttcaatggatttaatcacacctagcattacagaagatcaggagagtgaaacaacggctaattc 642745  T
Q  148 aaaagaatttgaaggcattagatgcttactctttggagaacgttggaaaaggacaattgtacgaagtgtacaacaactatctccactactct 239  Q
    |||  || ||||||||||| |||||||  | |||| ||| |||||  |||| |||||||||||||||||||||| |||||||||||||||||    
T  642746 aaataaagttgaaggcattggatgcttgttttttgaagagcgttgacaaagtacaattgtacgaagtgtacaaccactatctccactactct 642837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 77 - 237
Target Start/End: Complemental strand, 23881236 - 23881076
Alignment:
Q  77 aaaggttgttcaaatgttttaatcacgcctatcattacagaagactagaagcatgaagtaacggctaattcaaaagaatttgaaggcattagatgcttac 176  Q
    |||||||||| ||  | |||||||||||||| |||| |||||||| || ||  ||||| |||| |||||||||| ||| ||||||||||| ||||||| |    
T  23881236 aaaggttgtttaatggatttaatcacgcctagcattgcagaagaccaggagagtgaagcaacgactaattcaaatgaagttgaaggcattggatgcttgc 23881137  T
Q  177 tctttggagaacgttggaaaaggacaattgtacgaagtgtacaacaactatctccactact 237  Q
    | |||| ||| |||||  ||||  ||||||||||||||||||||| |||||||||||||||    
T  23881136 tttttgaagagcgttgacaaagtgcaattgtacgaagtgtacaaccactatctccactact 23881076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 136 - 243
Target Start/End: Original strand, 9398761 - 9398868
Alignment:
Q  136 aacggctaattcaaaagaatttgaaggcattagatgcttactctttggagaacgttggaaaaggacaattgtacgaagtgtacaacaactatctccacta 235  Q
    |||| |||||||||| ||| |||||||||||  ||||||||| |||| ||| |||||  |||| |||||||||||||||||| ||| |||||||||||||    
T  9398761 aacgactaattcaaatgaagttgaaggcattgaatgcttactttttgaagagcgttgacaaagtacaattgtacgaagtgtataaccactatctccacta 9398860  T
Q  236 ctctgttt 243  Q
    ||| ||||    
T  9398861 ctcagttt 9398868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 31 - 244
Target Start/End: Complemental strand, 20551111 - 20550897
Alignment:
Q  31 tcatcaggagctgaagatcatcagaaactgaaagaattgaagcttcaaa-ggttgttcaaatgttttaatcacgcctat-cattacagaagactagaagc 128  Q
    ||||||| |||||||| ||||||| |  || |||| || |||||||||| ||||||||||  ||||||||| || |||  |||| ||||| ||||||||     
T  20551111 tcatcagaagctgaagttcatcaggagatgcaagacttaaagcttcaaaaggttgttcaatggttttaatctcgtctaagcattgcagaaaactagaaga 20551012  T
Q  129 atgaagtaacggctaattcaaaagaatttgaaggcattagatgcttactctttggagaacgttggaaaaggacaattgtacgaagtgtacaacaactatc 228  Q
     ||||| |||| ||| ||  |||  ||||||||||||| |||||||  |||||  ||| |||||  |||  |||||||||||||||||||||| |||| |    
T  20551011 gtgaagcaacgactattttgaaaagatttgaaggcattggatgcttgttctttaaagagcgttgacaaat-acaattgtacgaagtgtacaaccactacc 20550913  T
Q  229 tccactactctgtttt 244  Q
    ||||||||||||||||    
T  20550912 tccactactctgtttt 20550897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 77 - 243
Target Start/End: Complemental strand, 6499408 - 6499242
Alignment:
Q  77 aaaggttgttcaaatgttttaatcacgcctatcattacagaagactagaagcatgaagtaacggctaattcaaaagaatttgaaggcattagatgcttac 176  Q
    |||||||||||||  | ||||||||| || |  ||| |||||||| || ||  ||||| |||  ||| |||||| ||| ||||||||||  ||||||| |    
T  6499408 aaaggttgttcaatggatttaatcacacccagtattgcagaagaccaggagagtgaagcaacatctatttcaaatgaagttgaaggcatcggatgcttgc 6499309  T
Q  177 tctttggagaacgttggaaaaggacaattgtacgaagtgtacaacaactatctccactactctgttt 243  Q
    | |||| ||| |||||  |||| |||||||||||||||||||||| |||||||||||||||| ||||    
T  6499308 tttttgaagagcgttgacaaagtacaattgtacgaagtgtacaaccactatctccactactcagttt 6499242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 70 - 243
Target Start/End: Complemental strand, 17815145 - 17814971
Alignment:
Q  70 aagcttcaaaggttgttcaaatgttttaatcacgcctat-cattacagaagactagaagcatgaagtaacggctaattcaaaagaatttgaaggcattag 168  Q
    |||||||||||| |||||||  | ||||||| || |||  |||| ||||||||| ||||  ||||| |||| ||| |   |||| ||||||| |||||||    
T  17815145 aagcttcaaaggctgttcaatggatttaatctcgtctaagcattgcagaagactggaagagtgaagcaacgactattctgaaaggatttgaaagcattag 17815046  T
Q  169 atgcttactctttggagaacgttggaaaaggacaattgtacgaagtgtacaacaactatctccactactctgttt 243  Q
    ||||||  |||||| ||| |||||  |||| ||||||||||| |||||||||| |||||||||||||||| ||||    
T  17815045 atgcttgttctttgaagagcgttgacaaagtacaattgtacggagtgtacaaccactatctccactactcagttt 17814971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 149 - 243
Target Start/End: Complemental strand, 21910653 - 21910559
Alignment:
Q  149 aaagaatttgaaggcattagatgcttactctttggagaacgttggaaaaggacaattgtacgaagtgtacaacaactatctccactactctgttt 243  Q
    |||| ||||||||||||| |||||||  |||||| ||| |||||  |||| |||||||||||||||||||||| |||||||||||||||| ||||    
T  21910653 aaaggatttgaaggcattggatgcttgttctttgaagagcgttgacaaagtacaattgtacgaagtgtacaaccactatctccactactcagttt 21910559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 109 - 243
Target Start/End: Original strand, 41566434 - 41566568
Alignment:
Q  109 cattacagaagactagaagcatgaagtaacggctaattcaaaagaatttgaaggcattagatgcttactctttggagaacgttggaaaaggacaattgta 208  Q
    |||| |||||||||||||   ||||| |||| ||| ||  |||| ||||||||||||| |||| ||| |||||| ||| |||||  | || |||||||||    
T  41566434 cattgcagaagactagaaaagtgaagcaacgtctattttgaaaggatttgaaggcattggatgtttattctttgaagagcgttgatatagtacaattgta 41566533  T
Q  209 cgaagtgtacaacaactatctccactactctgttt 243  Q
    ||||||||||||| |||||||||||||||| ||||    
T  41566534 cgaagtgtacaaccactatctccactactcagttt 41566568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 130 - 243
Target Start/End: Original strand, 12352816 - 12352929
Alignment:
Q  130 tgaagtaacggctaattcaaaagaatttgaaggcattagatgcttactctttggagaacgttggaaaaggacaattgtacgaagtgtacaacaactatct 229  Q
    ||||| || |||||||||||| ||| || |||||||| ||||||| |  |||| ||| |||||  |||| |||||||||||||||||||||| |||||||    
T  12352816 tgaagcaatggctaattcaaatgaagttaaaggcattggatgcttgcattttgaagagcgttgacaaagtacaattgtacgaagtgtacaaccactatct 12352915  T
Q  230 ccactactctgttt 243  Q
    ||||||||| ||||    
T  12352916 ccactactcagttt 12352929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 70 - 243
Target Start/End: Original strand, 21099665 - 21099838
Alignment:
Q  70 aagcttcaaaggttgttcaaatgttttaatcacgcctatcattacagaagactagaagcatgaagtaacggctaattcaaaagaatttgaaggcattaga 169  Q
    |||||||||||| |||| ||  | |||||||| ||||| ||||||| ||||| |  ||  ||||| |||  |||||||||| |||  |||||||||| ||    
T  21099665 aagcttcaaaggctgttaaatggatttaatcatgcctagcattacaaaagaccaagagagtgaagcaacaactaattcaaatgaagctgaaggcattgga 21099764  T
Q  170 tgcttactctttggagaacgttggaaaaggacaattgtacgaagtgtacaacaactatctccactactctgttt 243  Q
    ||||| |  |||| ||||||||   |||| |||||||||||||||||||||| |||| ||||||||||| ||||    
T  21099765 tgcttgccttttgaagaacgtttacaaagtacaattgtacgaagtgtacaaccactacctccactactcagttt 21099838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 27 - 243
Target Start/End: Original strand, 23412891 - 23413108
Alignment:
Q  27 aagatcatcaggagctgaagatcatcagaaactgaaagaattgaagcttcaaaggttgttcaaatgttttaatcacg-cctatcattacagaagactaga 125  Q
    ||||||| ||| |||||||| ||||||| |  || |||| || ||||||||||||||||||||  | ||||||| |  || | |||| |||||||| |||    
T  23412891 aagatcaccagaagctgaagttcatcaggagatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcatccaagcattgcagaagaccaga 23412990  T
Q  126 agcatgaagtaacggctaattcaaaagaatttgaaggcattagatgcttactctttggagaacgttggaaaaggacaattgtacgaagtgtacaacaact 225  Q
    ||  ||||| ||||  || ||  |||| ||||||| ||||| |||||||  | |||| ||| |||||  | || |||||||||||||||||||||| |||    
T  23412991 agagtgaagcaacgattattttgaaaggatttgaaagcattggatgcttgttttttgaagagcgttgacatagtacaattgtacgaagtgtacaaccact 23413090  T
Q  226 atctccactactctgttt 243  Q
    ||||||||||||| ||||    
T  23413091 atctccactactcagttt 23413108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 27 - 243
Target Start/End: Original strand, 21072158 - 21072374
Alignment:
Q  27 aagatcatcaggagctgaagatcatcagaaactgaaagaattgaagcttcaaaggttgttcaaatgttttaatcacgcctatcattacagaagactagaa 126  Q
    ||||||| ||| |||||||| ||||||| |  || |||| || |||||| ||||||||||| |  | ||||||||| |  | |||| |||||||| ||||    
T  21072158 aagatcaccagaagctgaagttcatcaggagatgcaagacttaaagcttaaaaggttgttctatggatttaatcactcacagcattgcagaagaccagaa 21072257  T
Q  127 gcatgaagtaacggctaattcaaaagaatttgaaggcattagatgcttactctttggagaacgttggaaaaggacaattgtacgaagtgtacaacaacta 226  Q
    |  ||||| |||  ||| ||  |||| ||||||| ||||| |||||||  |||||| ||| |||||  | || |||||||||||||||||||||| ||||    
T  21072258 gagtgaagcaacaactattttgaaaggatttgaaagcattggatgcttgttctttgaagagcgttgacatagtacaattgtacgaagtgtacaaccacta 21072357  T
Q  227 tctccactactctgttt 243  Q
    |||| ||||||| ||||    
T  21072358 tctctactactcagttt 21072374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 70 - 244
Target Start/End: Original strand, 7745653 - 7745828
Alignment:
Q  70 aagcttcaaaggttgttcaaatgttttaatcacg-cctatcattacagaagactagaagcatgaagtaacggctaattcaaaagaatttgaaggcattag 168  Q
    ||||||||||||||||||||  | ||||||| |  || | ||||  |||||||||||||  ||||| |||  ||| ||  |||| ||||||||||||| |    
T  7745653 aagcttcaaaggttgttcaatggatttaatcgcatccaagcattggagaagactagaagagtgaagcaacaactattttgaaaggatttgaaggcattgg 7745752  T
Q  169 atgcttactctttggagaacgttggaaaaggacaattgtacgaagtgtacaacaactatctccactactctgtttt 244  Q
    ||||||  ||||   ||| |||||  |||| |||||||||||||||||||||| |||| ||||||||||| |||||    
T  7745753 atgcttgttcttcaaagagcgttgacaaagtacaattgtacgaagtgtacaaccactacctccactactcggtttt 7745828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 70 - 243
Target Start/End: Original strand, 89382 - 89556
Alignment:
Q  70 aagcttcaaaggttgttcaaatgttttaatcacgcctatca-ttacagaagactagaagcatgaagtaacggctaattcaaaagaatttgaaggcattag 168  Q
    |||||||||| |||||||||  | ||||||| || |||  | || |||||||| |||||  ||||| |||| ||| ||  |||||||||||| |||||      
T  89382 aagcttcaaaagttgttcaatggatttaatctcgtctaagaattgcagaagaccagaagagtgaagcaacgactattttgaaagaatttgaaagcattgc 89481  T
Q  169 atgcttactctttggagaacgttggaaaaggacaattgtacgaagtgtacaacaactatctccactactctgttt 243  Q
    ||||||  |||||| ||| | |||  | || |||||||||||||||||||||| |||||||||||||||| ||||    
T  89482 atgcttgttctttgaagagcattgacatagtacaattgtacgaagtgtacaaccactatctccactactcagttt 89556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 149 - 246
Target Start/End: Complemental strand, 30743077 - 30742980
Alignment:
Q  149 aaagaatttgaaggcattagatgcttactctttggagaacgttggaaaaggacaattgtacgaagtgtacaacaactatctccactactctgttttgt 246  Q
    |||| ||||||||||||| |||| ||| ||||   ||| |||||  |||| ||  |||||||||||||||||| |||| |||||||||||||||||||    
T  30743077 aaaggatttgaaggcattggatgtttattcttcaaagagcgttgacaaagtacgtttgtacgaagtgtacaaccactacctccactactctgttttgt 30742980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 70 - 243
Target Start/End: Original strand, 6512391 - 6512562
Alignment:
Q  70 aagcttcaaaggttgttcaaatgttttaatcacgcctat-cattacagaagactagaagcatgaagtaacggctaattcaaaagaatttgaaggcattag 168  Q
    |||||||||||||||||||   | ||||||| || |||  |||| | ||||||| ||||  ||||| |||| ||| ||  |||| ||||||||||||| |    
T  6512391 aagcttcaaaggttgttcagtggatttaatctcgtctaagcattgctgaagactggaagagtgaagcaacgactattttgaaaggatttgaaggcattgg 6512490  T
Q  169 atgcttactctttggagaacgttggaaaaggacaattgtacgaagtgtacaacaactatctccactactctgttt 243  Q
       |||  |||||| ||| |||||  |||| |||||||||||||||||||||| ||||||| |||||||| ||||    
T  6512491 ---cttgttctttgaagagcgttgacaaagtacaattgtacgaagtgtacaaccactatcttcactactcagttt 6512562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 204 - 244
Target Start/End: Complemental strand, 9089011 - 9088971
Alignment:
Q  204 ttgtacgaagtgtacaacaactatctccactactctgtttt 244  Q
    |||||||||||||||||| ||||||||||||||||||||||    
T  9089011 ttgtacgaagtgtacaaccactatctccactactctgtttt 9088971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 154 - 246
Target Start/End: Complemental strand, 15517061 - 15516969
Alignment:
Q  154 atttgaaggcattagatgcttactctttggagaacgttggaaaaggacaattgtacgaagtgtacaacaactatctccactactctgttttgt 246  Q
    ||||||||||||| |||||||| ||||   |||  ||||| | || ||  |||||||||||||||||| |||| |||||||||||||||||||    
T  15517061 atttgaaggcattggatgcttattcttcaaagagtgttggcatagtacttttgtacgaagtgtacaaccactacctccactactctgttttgt 15516969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 204 - 244
Target Start/End: Complemental strand, 28139649 - 28139609
Alignment:
Q  204 ttgtacgaagtgtacaacaactatctccactactctgtttt 244  Q
    |||||||||||||||||| ||||||||||||||||||||||    
T  28139649 ttgtacgaagtgtacaaccactatctccactactctgtttt 28139609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 154 - 237
Target Start/End: Original strand, 19536346 - 19536429
Alignment:
Q  154 atttgaaggcattagatgcttactctttggagaacgttggaaaaggacaattgtacgaagtgtacaacaactatctccactact 237  Q
    ||||||| ||||| |||| ||  |||||| ||| |||||  | || |||||||||||||||||||||| |||||||||||||||    
T  19536346 atttgaaagcattggatgtttgttctttgaagagcgttgacatagtacaattgtacgaagtgtacaaccactatctccactact 19536429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 168 - 243
Target Start/End: Complemental strand, 26784432 - 26784357
Alignment:
Q  168 gatgcttactctttggagaacgttggaaaaggacaattgtacgaagtgtacaacaactatctccactactctgttt 243  Q
    |||||||| |||||| ||| |||||  | || |||||||||||||||||||||| |||| ||||||||||| ||||    
T  26784432 gatgcttattctttgaagagcgttgacatagtacaattgtacgaagtgtacaaccactacctccactactcagttt 26784357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 204 - 243
Target Start/End: Original strand, 29138501 - 29138540
Alignment:
Q  204 ttgtacgaagtgtacaacaactatctccactactctgttt 243  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  29138501 ttgtacgaagtgtacaaccactatctccactactctgttt 29138540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 149 - 244
Target Start/End: Complemental strand, 33022761 - 33022666
Alignment:
Q  149 aaagaatttgaaggcattagatgcttactctttggagaacgttggaaaaggacaattgtacgaagtgtacaacaactatctccactactctgtttt 244  Q
    |||| ||||||||||||| |||| ||  ||||   ||| |||||  |||| |||||||||||||||||||||| |||| |||||||||| ||||||    
T  33022761 aaaggatttgaaggcattggatgtttgttcttcaaagagcgttgacaaagtacaattgtacgaagtgtacaaccactacctccactactatgtttt 33022666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 204 - 246
Target Start/End: Complemental strand, 42243722 - 42243680
Alignment:
Q  204 ttgtacgaagtgtacaacaactatctccactactctgttttgt 246  Q
    |||||||||||||||||| |||| |||||||||||||||||||    
T  42243722 ttgtacgaagtgtacaaccactacctccactactctgttttgt 42243680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 184 - 248
Target Start/End: Original strand, 2152988 - 2153051
Alignment:
Q  184 agaacgttggaaaaggacaattgtacgaagtgtacaacaactatctccactactctgttttgtgt 248  Q
    |||||||| |||||||||||| |||  |  |||||||| ||||||||||||||||||||||||||    
T  2152988 agaacgttagaaaaggacaatagtat-agttgtacaaccactatctccactactctgttttgtgt 2153051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 204 - 244
Target Start/End: Original strand, 3245536 - 3245576
Alignment:
Q  204 ttgtacgaagtgtacaacaactatctccactactctgtttt 244  Q
    |||||||||||||||||| |||||||||| |||||||||||    
T  3245536 ttgtacgaagtgtacaaccactatctccagtactctgtttt 3245576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 204 - 244
Target Start/End: Complemental strand, 10848815 - 10848775
Alignment:
Q  204 ttgtacgaagtgtacaacaactatctccactactctgtttt 244  Q
    |||||| ||||||||||| ||||||||||||||||||||||    
T  10848815 ttgtacaaagtgtacaaccactatctccactactctgtttt 10848775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 154 - 246
Target Start/End: Complemental strand, 26765590 - 26765498
Alignment:
Q  154 atttgaaggcattagatgcttactctttggagaacgttggaaaaggacaattgtacgaagtgtacaacaactatctccactactctgttttgt 246  Q
    ||||||||||||| |||||||| ||||   ||| || || || || ||  |||||||||||||||||| |||  |||||||||||||||||||    
T  26765590 atttgaaggcattggatgcttattcttcaaagagcgctgaaatagtacgtttgtacgaagtgtacaaccactgcctccactactctgttttgt 26765498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 204 - 244
Target Start/End: Original strand, 28464434 - 28464474
Alignment:
Q  204 ttgtacgaagtgtacaacaactatctccactactctgtttt 244  Q
    |||||||||||||||||| |||||||| |||||||||||||    
T  28464434 ttgtacgaagtgtacaaccactatctctactactctgtttt 28464474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 204 - 244
Target Start/End: Original strand, 30115932 - 30115972
Alignment:
Q  204 ttgtacgaagtgtacaacaactatctccactactctgtttt 244  Q
    ||||||||| |||||||| ||||||||||||||||||||||    
T  30115932 ttgtacgaaatgtacaaccactatctccactactctgtttt 30115972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 204 - 244
Target Start/End: Complemental strand, 33933309 - 33933269
Alignment:
Q  204 ttgtacgaagtgtacaacaactatctccactactctgtttt 244  Q
    |||||||||||||||||| |||| |||||||||||||||||    
T  33933309 ttgtacgaagtgtacaaccactacctccactactctgtttt 33933269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 205 - 244
Target Start/End: Complemental strand, 4887063 - 4887024
Alignment:
Q  205 tgtacgaagtgtacaacaactatctccactactctgtttt 244  Q
    ||||||||||||||||| |||| |||||||||||||||||    
T  4887063 tgtacgaagtgtacaaccactacctccactactctgtttt 4887024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 149 - 244
Target Start/End: Original strand, 13545552 - 13545647
Alignment:
Q  149 aaagaatttgaaggcattagatgcttactctttggagaacgttggaaaaggacaattgtacgaagtgtacaacaactatctccactactctgtttt 244  Q
    |||| ||||||||||||| |||||||  ||||   ||| |||||  |||| |||| ||||||||||||||||| || | |||||||||||| ||||    
T  13545552 aaaggatttgaaggcattggatgcttgttcttcaaagagcgttgacaaagtacaagtgtacgaagtgtacaaccaccacctccactactctatttt 13545647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 204 - 246
Target Start/End: Complemental strand, 26759191 - 26759149
Alignment:
Q  204 ttgtacgaagtgtacaacaactatctccactactctgttttgt 246  Q
    |||||||||||||||||| |||| |||||||||||| ||||||    
T  26759191 ttgtacgaagtgtacaaccactacctccactactctattttgt 26759149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 204 - 244
Target Start/End: Original strand, 14086634 - 14086674
Alignment:
Q  204 ttgtacgaagtgtacaacaactatctccactactctgtttt 244  Q
    ||||||||||||||||||  ||| |||||||||||||||||    
T  14086634 ttgtacgaagtgtacaaccgctacctccactactctgtttt 14086674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 204 - 244
Target Start/End: Original strand, 23391698 - 23391738
Alignment:
Q  204 ttgtacgaagtgtacaacaactatctccactactctgtttt 244  Q
    |||||||||||||||||  ||||||| ||||||||||||||    
T  23391698 ttgtacgaagtgtacaatcactatctgcactactctgtttt 23391738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 204 - 244
Target Start/End: Original strand, 25930251 - 25930291
Alignment:
Q  204 ttgtacgaagtgtacaacaactatctccactactctgtttt 244  Q
    ||||||||| |||||||| |||||||| |||||||||||||    
T  25930251 ttgtacgaattgtacaaccactatctctactactctgtttt 25930291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 204 - 244
Target Start/End: Original strand, 35932101 - 35932141
Alignment:
Q  204 ttgtacgaagtgtacaacaactatctccactactctgtttt 244  Q
    |||||||||||||||||| ||||  ||||||||||||||||    
T  35932101 ttgtacgaagtgtacaaccactacttccactactctgtttt 35932141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064 (Bit Score: 92; Significance: 9e-45; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 31 - 246
Target Start/End: Original strand, 43811 - 44026
Alignment:
Q  31 tcatcaggagctgaagatcatcagaaactgaaagaattgaagcttcaaaggttgttcaaatgttttaatcacgcctatcattacagaagactagaagcat 130  Q
    |||||||||| |||||||||||||||  ||| ||| || || ||||||||| |||||||| | |||||||||||||| |||| |||||||  |||||  |    
T  43811 tcatcaggagatgaagatcatcagaagatgagagacttaaaacttcaaaggctgttcaaaagatttaatcacgcctaacattgcagaagatcagaagagt 43910  T
Q  131 gaagtaacggctaattcaaaagaatttgaaggcattagatgcttactctttggagaacgttggaaaaggacaattgtacgaagtgtacaacaactatctc 230  Q
    |||| || |||||||||||||  ||||||||||||| ||||| |  || ||| ||| ||||| ||||||||| ||||||||| |||||||| ||||||||    
T  43911 gaagcaaaggctaattcaaaaagatttgaaggcattggatgcctgttccttgaagagcgttgaaaaaggacatttgtacgaattgtacaaccactatctc 44010  T
Q  231 cactactctgttttgt 246  Q
    ||||||||||||||||    
T  44011 cactactctgttttgt 44026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 84; Significance: 6e-40; HSPs: 3)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 77 - 264
Target Start/End: Complemental strand, 29969 - 29780
Alignment:
Q  77 aaaggttgttcaaatgtt-tta--atcacgcctatcattacagaagactagaagcatgaagtaacggctaattcaaaagaatttgaaggcattagatgct 173  Q
    |||| ||||||||||||| |||  ||||||||||||||| ||||||| ||||||| || || |||| |||||||| | ||||| ||||||||| ||||||    
T  29969 aaagattgttcaaatgttgttattatcacgcctatcattgcagaagaatagaagcctggagcaacgactaattcagatgaattggaaggcattggatgct 29870  T
Q  174 tactctttggagaacgttggaaaaggacaattgtacgaagtgtacaacaactatctccactactctgttttgtgtatgcaatagtacaaga 264  Q
    || ||||||||||||||| |||||||||||| |||| ||||| ||||| ||||||||||||| | |||||| ||| |||||||||||||||    
T  29869 tattctttggagaacgttcgaaaaggacaatagtac-aagtggacaaccactatctccactattttgttttatgtctgcaatagtacaaga 29780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 204 - 244
Target Start/End: Original strand, 99270 - 99310
Alignment:
Q  204 ttgtacgaagtgtacaacaactatctccactactctgtttt 244  Q
    |||||||||||||||||| ||||||||||||||||||||||    
T  99270 ttgtacgaagtgtacaaccactatctccactactctgtttt 99310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 70 - 243
Target Start/End: Original strand, 19402 - 19576
Alignment:
Q  70 aagcttcaaaggttgttcaaatgttttaatcacgcctatca-ttacagaagactagaagcatgaagtaacggctaattcaaaagaatttgaaggcattag 168  Q
    |||||||||| |||||||||  | ||||||  ||||||  | || ||||||||||||||  ||||| |||  ||| ||  |||| |||| || ||||| |    
T  19402 aagcttcaaaagttgttcaatggatttaatttcgcctaagaattgcagaagactagaagagtgaagcaacaactattttgaaaggatttaaaagcattgg 19501  T
Q  169 atgcttactctttggagaacgttggaaaaggacaattgtacgaagtgtacaacaactatctccactactctgttt 243  Q
    ||||||  |||||| ||| |||||  | |  |||||||||||||||||||||| ||||| | |||||||| ||||    
T  19502 atgcttgttctttgaagagcgttgacataatacaattgtacgaagtgtacaaccactatattcactactcagttt 19576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0324 (Bit Score: 77; Significance: 8e-36; HSPs: 1)
Name: scaffold0324
Description:

Target: scaffold0324; HSP #1
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 24 - 243
Target Start/End: Complemental strand, 10183 - 9963
Alignment:
Q  24 ctaaagatcatcaggagctgaagatcatcagaaactgaaagaattgaagcttcaaa-ggttgttcaaatgttttaatcacgcctatcattacagaagact 122  Q
    |||||| ||| ||| |||||||| |||||||||  | | ||| || |||||||||| || |||||||  | |||||||||||||| |||| ||||||||     
T  10183 ctaaagttcaccagaagctgaagttcatcagaagataagagacttaaagcttcaaatggctgttcaatggatttaatcacgcctagcattgcagaagacc 10084  T
Q  123 agaagcatgaagtaacggctaattcaaaagaatttgaaggcattagatgcttactctttggagaacgttggaaaaggacaattgtacgaagtgtacaaca 222  Q
    | |||  ||||| ||||||||||||||| ||||||||||||||| |||||||  |||||| ||| |||||  |||| |||||||||| |||||||||||     
T  10083 ataagagtgaagcaacggctaattcaaatgaatttgaaggcattcgatgcttgttctttgaagagcgttgacaaagtacaattgtacaaagtgtacaacc 9984  T
Q  223 actatctccactactctgttt 243  Q
    |||| ||||||||||| ||||    
T  9983 actacctccactactcagttt 9963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 73; Significance: 2e-33; HSPs: 5)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 31 - 243
Target Start/End: Complemental strand, 159274 - 159062
Alignment:
Q  31 tcatcaggagctgaagatcatcagaaactgaaagaattgaagcttcaaaggttgttcaaatgttttaatcacgcctatcattacagaagactagaagcat 130  Q
    ||||||| ||||||||| ||||| ||  ||| ||| ||  ||||||||||| |||||||| | |||||||||| ||| |||| || ||||  |||||  |    
T  159274 tcatcagaagctgaagaccatcaaaagatgagagacttagagcttcaaaggatgttcaaaggatttaatcacgtctaacattgcaaaagatcagaagagt 159175  T
Q  131 gaagtaacggctaattcaaaagaatttgaaggcattagatgcttactctttggagaacgttggaaaaggacaattgtacgaagtgtacaacaactatctc 230  Q
    |||| ||||||||||||||| |||||||||||||||| ||||||  |||||| ||| |||||  |||||||||||||| |||||||| ||| |||| |||    
T  159174 gaagcaacggctaattcaaatgaatttgaaggcattatatgcttgttctttgaagagcgttgacaaaggacaattgtatgaagtgtaaaaccactacctc 159075  T
Q  231 cactactctgttt 243  Q
     |||||| |||||    
T  159074 tactactttgttt 159062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 189 - 244
Target Start/End: Complemental strand, 37463 - 37408
Alignment:
Q  189 gttggaaaaggacaattgtacgaagtgtacaacaactatctccactactctgtttt 244  Q
    ||||| |||| |||||||||||||||||||||| |||| |||||||||||| ||||    
T  37463 gttggcaaagtacaattgtacgaagtgtacaaccactacctccactactctatttt 37408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 189 - 244
Target Start/End: Complemental strand, 135523 - 135468
Alignment:
Q  189 gttggaaaaggacaattgtacgaagtgtacaacaactatctccactactctgtttt 244  Q
    ||||| |||| |||||||||||||||||||||| |||| |||||||||||| ||||    
T  135523 gttggcaaagtacaattgtacgaagtgtacaaccactacctccactactctatttt 135468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #4
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 70 - 172
Target Start/End: Complemental strand, 39606 - 39503
Alignment:
Q  70 aagcttcaaaggttgttcaaatgttttaatcacgcctat-cattacagaagactagaagcatgaagtaacggctaattcaaaagaatttgaaggcattag 168  Q
    |||||||||||| |||||||  | ||||||| || |||  ||||||| |||||||||||  ||||| |||  ||||||  |||| |||||||||||||||    
T  39606 aagcttcaaaggctgttcaatggatttaatctcgtctaggcattacaaaagactagaagagtgaagcaacaactaatttgaaaggatttgaaggcattag 39507  T
Q  169 atgc 172  Q
    ||||    
T  39506 atgc 39503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #5
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 70 - 172
Target Start/End: Complemental strand, 137666 - 137563
Alignment:
Q  70 aagcttcaaaggttgttcaaatgttttaatcacgcctat-cattacagaagactagaagcatgaagtaacggctaattcaaaagaatttgaaggcattag 168  Q
    |||||||||||| |||||||  | ||||||| || |||  ||||||| |||||||||||  ||||| |||  ||||||  |||| |||||||||||||||    
T  137666 aagcttcaaaggctgttcaatggatttaatctcgtctaggcattacaaaagactagaagagtgaagcaacaactaatttgaaaggatttgaaggcattag 137567  T
Q  169 atgc 172  Q
    ||||    
T  137566 atgc 137563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0364 (Bit Score: 70; Significance: 1e-31; HSPs: 1)
Name: scaffold0364
Description:

Target: scaffold0364; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 42 - 239
Target Start/End: Complemental strand, 6215 - 6018
Alignment:
Q  42 tgaagatcatcagaaactgaaagaattgaagcttcaaaggttgttcaaatgttttaatcacgcctatcattacagaagactagaagcatgaagtaacggc 141  Q
    ||||| |||||||||  ||| ||| || |||||||||||  |||||||| | |||||||||||||| |||| |||||||| |||||   |||| |||  |    
T  6215 tgaagttcatcagaagatgagagatttaaagcttcaaagactgttcaaaggatttaatcacgcctagcattgcagaagaccagaagaccgaagcaacaac 6116  T
Q  142 taattcaaaagaatttgaaggcattagatgcttactctttggagaacgttggaaaaggacaattgtacgaagtgtacaacaactatctccactactct 239  Q
    ||||||||||| ||||||||||||| |||||||  |||||| ||| |||||  |||| |||||||||| ||||||||||| |||| ||| ||||||||    
T  6115 taattcaaaaggatttgaaggcattggatgcttgttctttgaagagcgttgacaaagtacaattgtacaaagtgtacaaccactacctctactactct 6018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 70; Significance: 1e-31; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 30 - 243
Target Start/End: Complemental strand, 10123 - 9910
Alignment:
Q  30 atcatcaggagctgaagatcatcagaaactgaaagaattgaagcttcaaaggttgttcaaatgttttaatcacgcctatcattacagaagactagaagca 129  Q
    |||| ||| |||||||| |||||||||  ||| | | || |||||||||||| ||||| || | |||||||||| ||| |||| |||||||  |||||      
T  10123 atcaccagaagctgaagttcatcagaagatgagaaacttaaagcttcaaaggctgttctaaggatttaatcacgtctagcattgcagaagatcagaagag 10024  T
Q  130 tgaagtaacggctaattcaaaagaatttgaaggcattagatgcttactctttggagaacgttggaaaaggacaattgtacgaagtgtacaacaactatct 229  Q
    || |  |||| |||||||||| |||||||||||||||||||||||  |||||| ||| |||||  |||| |||||||||||||||||| ||| |||| ||    
T  10023 tgcaacaacgactaattcaaatgaatttgaaggcattagatgcttgttctttgaagagcgttgacaaagtacaattgtacgaagtgtaaaaccactacct 9924  T
Q  230 ccactactctgttt 243  Q
    |||||||| |||||    
T  9923 ccactactatgttt 9910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0498 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0498
Description:

Target: scaffold0498; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 152 - 275
Target Start/End: Original strand, 326 - 448
Alignment:
Q  152 gaatttgaaggcattagatgcttactctttggagaacgttggaaaaggacaattgtacgaagtgtacaacaactatctccactactctgttttgtgtatg 251  Q
    ||||||||||||||| |||||||| ||||||   ||||||||||||||||| | |||| ||||||||||| |||| ||||||||||||||||||||| ||    
T  326 gaatttgaaggcattggatgcttattctttgttaaacgttggaaaaggacattagtac-aagtgtacaaccactacctccactactctgttttgtgtctg 424  T
Q  252 caatagtacaagagaaacagttgt 275  Q
    |||||||||||||  |||||||||    
T  425 caatagtacaagaacaacagttgt 448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1747 (Bit Score: 64; Significance: 5e-28; HSPs: 1)
Name: scaffold1747
Description:

Target: scaffold1747; HSP #1
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 157 - 256
Target Start/End: Complemental strand, 1410 - 1311
Alignment:
Q  157 tgaaggcattagatgcttactctttggagaacgttggaaaaggacaattgtacgaagtgtacaacaactatctccactactctgttttgtgtatgcaata 256  Q
    ||||||||||||||||||| | |||| ||| ||||| ||||  |||||||||||||||||||||| |||||||||||||||||||||||||| |||||||    
T  1410 tgaaggcattagatgcttattttttgaagagcgttgaaaaactacaattgtacgaagtgtacaaccactatctccactactctgttttgtgtctgcaata 1311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1745 (Bit Score: 64; Significance: 5e-28; HSPs: 1)
Name: scaffold1745
Description:

Target: scaffold1745; HSP #1
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 157 - 256
Target Start/End: Original strand, 1 - 100
Alignment:
Q  157 tgaaggcattagatgcttactctttggagaacgttggaaaaggacaattgtacgaagtgtacaacaactatctccactactctgttttgtgtatgcaata 256  Q
    ||||||||||||||||||| | |||| ||| ||||| ||||  |||||||||||||||||||||| |||||||||||||||||||||||||| |||||||    
T  1 tgaaggcattagatgcttattttttgaagagcgttgaaaaactacaattgtacgaagtgtacaaccactatctccactactctgttttgtgtctgcaata 100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 158 - 264
Target Start/End: Complemental strand, 144996 - 144891
Alignment:
Q  158 gaaggcattagatgcttactctttggagaacgttggaaaaggacaattgtacgaagtgtacaacaactatctccactactctgttttgtgtatgcaatag 257  Q
    ||||||||| |||||||| |||||||||||| ||||||||||||||| |||| || |||||| | |||| ||||||||||||||||||||| ||||||||    
T  144996 gaaggcattggatgcttattctttggagaactttggaaaaggacaatagtac-aattgtacatccactacctccactactctgttttgtgtctgcaatag 144898  T
Q  258 tacaaga 264  Q
    |||||||    
T  144897 tacaaga 144891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 70 - 244
Target Start/End: Original strand, 20901 - 21076
Alignment:
Q  70 aagcttcaaaggttgttcaaatgttttaatcacgcctat-cattacagaagactagaagcatgaagtaacggctaattcaaaagaatttgaaggcattag 168  Q
    |||||||||||||||||||| || ||||||| || |||  |||| ||||||||||||||  ||||| |||||  | ||  |||| ||||||||||||| |    
T  20901 aagcttcaaaggttgttcaattgatttaatctcgtctaagcattgcagaagactagaagagtgaagcaacggtcattttgaaaggatttgaaggcattgg 21000  T
Q  169 atgcttactctttggagaacgttggaaaaggacaattgtacgaagtgtacaacaactatctccactactctgtttt 244  Q
    ||||||| ||||   ||| ||| |   ||| |||||||||||||||||||||| ||||||||||||||||||||||    
T  21001 atgcttattcttcaaagagcgtcgaccaagtacaattgtacgaagtgtacaaccactatctccactactctgtttt 21076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0479 (Bit Score: 59; Significance: 5e-25; HSPs: 1)
Name: scaffold0479
Description:

Target: scaffold0479; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 114 - 244
Target Start/End: Complemental strand, 10105 - 9975
Alignment:
Q  114 cagaagactagaagcatgaagtaacggctaattcaaaagaatttgaaggcattagatgcttactctttggagaacgttggaaaaggacaattgtacgaag 213  Q
    ||||||||||||||  |||||||||| ||| ||  |||| ||||||| ||||| ||||||||||||||| ||| ||||   |||| |||||||||| |||    
T  10105 cagaagactagaagagtgaagtaacgactattttgaaaggatttgaaagcattggatgcttactctttgaagagcgttcacaaagtacaattgtacaaag 10006  T
Q  214 tgtacaacaactatctccactactctgtttt 244  Q
    |||||||| |||| |||||||||||||||||    
T  10005 tgtacaaccactacctccactactctgtttt 9975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0210 (Bit Score: 59; Significance: 5e-25; HSPs: 1)
Name: scaffold0210
Description:

Target: scaffold0210; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 27 - 244
Target Start/End: Complemental strand, 1884 - 1666
Alignment:
Q  27 aagatcatcaggagctgaagatcatcagaaactgaaagaattgaagcttcaaaggttgttcaaatgttttaatcacgcctat-cattacagaagactaga 125  Q
    ||||||| ||| |||||||| ||||||| |  || |||| || ||||||||||||||||||||  | || |||| || |||  | || ||||||||||||    
T  1884 aagatcaccagaagctgaagttcatcaggagatgcaagacttaaagcttcaaaggttgttcaatggattcaatctcgtctaagctttgcagaagactaga 1785  T
Q  126 agcatgaagtaacggctaattcaaaagaatttgaaggcattagatgcttactctttggagaacgttggaaaaggacaattgtacgaagtgtacaacaact 225  Q
    ||  ||||  |||| ||| ||  |||| ||||||| ||||| ||||||||||||||| ||| |||||  |||| ||||||||| |||||||||||| |||    
T  1784 agagtgaaacaacgactattttgaaaggatttgaaagcattggatgcttactctttgaagagcgttgacaaagtacaattgtaggaagtgtacaaccact 1685  T
Q  226 atctccactactctgtttt 244  Q
    | |||||||||| ||||||    
T  1684 acctccactactttgtttt 1666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 57; Significance: 7e-24; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 98 - 248
Target Start/End: Complemental strand, 78548 - 78397
Alignment:
Q  98 atcacgcctatcattacagaagactagaagcatgaagtaacggctaattcaaaagaa-tttgaaggcattagatgcttactctttggagaacgtt-ggaa 195  Q
    ||||||||||||||| | ||||| ||||||| ||  | ||||||||||||| | ||| |||||||||||| |||| ||| ||||| ||||||||| ||||    
T  78548 atcacgcctatcattgctgaagaatagaagcttggggcaacggctaattcagaggaattttgaaggcattggatgtttattctttagagaacgttgggaa 78449  T
Q  196 aaggacaattgtacgaagtgtacaacaactatctccactactctgttttgtgt 248  Q
    ||||||||| |||| || |||||||| ||||||||||||| | ||||||||||    
T  78448 aaggacaatagtac-aattgtacaaccactatctccactattttgttttgtgt 78397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084 (Bit Score: 55; Significance: 1e-22; HSPs: 2)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 109 - 243
Target Start/End: Complemental strand, 32626 - 32492
Alignment:
Q  109 cattacagaagactagaagcatgaagtaacggctaattcaaaagaatttgaaggcattagatgcttactctttggagaacgttggaaaaggacaattgta 208  Q
    |||| ||||||||| ||||  |||||||||| ||| ||  |||| ||||||| ||||| |||||||  |||||| ||| |||||  |||| |||||||||    
T  32626 cattgcagaagactggaagagtgaagtaacgactattttgaaaggatttgaatgcatttgatgcttgttctttgaagagcgttgacaaagtacaattgta 32527  T
Q  209 cgaagtgtacaacaactatctccactactctgttt 243  Q
    ||||||||||||| |||||||||||||||| ||||    
T  32526 cgaagtgtacaaccactatctccactactcagttt 32492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 149 - 243
Target Start/End: Complemental strand, 49433 - 49339
Alignment:
Q  149 aaagaatttgaaggcattagatgcttactctttggagaacgttggaaaaggacaattgtacgaagtgtacaacaactatctccactactctgttt 243  Q
    |||| ||||||||||||| |||||||  |||||| ||| |||||  |||| ||||||||||||||||||||||||||||||||||||||| ||||    
T  49433 aaaggatttgaaggcattggatgcttgttctttgaagagcgttgacaaagtacaattgtacgaagtgtacaacaactatctccactactcagttt 49339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 55; Significance: 1e-22; HSPs: 3)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 44 - 174
Target Start/End: Original strand, 151775 - 151905
Alignment:
Q  44 aagatcatcagaaactgaaagaattgaagcttcaaaggttgttcaaatgttttaatcacgcctatcattacagaagactagaagcatgaagtaacggcta 143  Q
    ||||||| |||||  ||| ||| || ||||||||||||||||||||| | ||||||||| ||||  |||  ||||||| |||| | ||||  ||||||||    
T  151775 aagatcaccagaagatgagagacttaaagcttcaaaggttgttcaaaggatttaatcacacctagtattgtagaagaccagaaacgtgaaacaacggcta 151874  T
Q  144 attcaaaagaatttgaaggcattagatgctt 174  Q
    ||||||| |||||||||||||||||||||||    
T  151875 attcaaatgaatttgaaggcattagatgctt 151905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 27 - 243
Target Start/End: Complemental strand, 60240 - 60023
Alignment:
Q  27 aagatcatcaggagctgaagatcatcagaaactgaaagaattgaagcttcaaaggttgttcaaatgttttaatcacg-cctatcattacagaagactaga 125  Q
    ||||||| ||| |||| ||| |||||||||  || |||| || |||||||||||| |||||||  | ||||||| || || |  ||| ||||||||| ||    
T  60240 aagatcaccagaagctaaagttcatcagaagatgcaagacttaaagcttcaaaggatgttcaatggatttaatctcgtccaagaattgcagaagactgga 60141  T
Q  126 agcatgaagtaacggctaattcaaaagaatttgaaggcattagatgcttactctttggagaacgttggaaaaggacaattgtacgaagtgtacaacaact 225  Q
    |   ||||| |||| ||| ||  |||| |||||||| |||| |||||||  |||||| ||| |||||  | || |||||||||||||||||||||| |||    
T  60140 aaagtgaagcaacgactattttgaaaggatttgaagccattggatgcttgttctttgaagagcgttgacatagtacaattgtacgaagtgtacaaccact 60041  T
Q  226 atctccactactctgttt 243  Q
    |||||  |||||| ||||    
T  60040 atctcttctactcagttt 60023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 149 - 236
Target Start/End: Complemental strand, 8027 - 7940
Alignment:
Q  149 aaagaatttgaaggcattagatgcttactctttggagaacgttggaaaaggacaattgtacgaagtgtacaacaactatctccactac 236  Q
    |||| |||||||  |||| |||||||  |||||| ||| |||||  | || |||||||||||||||||||||| ||||||||||||||    
T  8027 aaaggatttgaattcattggatgcttgttctttgaagagcgttgacatagtacaattgtacgaagtgtacaaccactatctccactac 7940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0411 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0411
Description:

Target: scaffold0411; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 149 - 238
Target Start/End: Complemental strand, 12310 - 12221
Alignment:
Q  149 aaagaatttgaaggcattagatgcttactctttggagaacgttggaaaaggacaattgtacgaagtgtacaacaactatctccactactc 238  Q
    |||||||||||| ||||| |||||||| |||||| ||| |||||  |||| |||||||||||||||||||||| ||||||||||||||||    
T  12310 aaagaatttgaaagcattggatgcttattctttgaagagcgttgacaaagtacaattgtacgaagtgtacaaccactatctccactactc 12221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 70 - 264
Target Start/End: Complemental strand, 268959 - 268766
Alignment:
Q  70 aagcttcaaaggttgttcaaatgtt-tta--atcacgcctatcattacagaagactagaagcatgaagtaacggctaattcaaaagaatttgaaggcatt 166  Q
    ||||||||||| ||||| ||||||| |||  ||||||||||||||| ||||||| || |||| || |  ||| ||||| |||||  |||| |||  ||||    
T  268959 aagcttcaaagattgttaaaatgttgttattatcacgcctatcattgcagaagaatataagcctggaacaacagctaactcaaagaaattggaaaacatt 268860  T
Q  167 agatgcttactctttggagaacgttggaaaaggacaattgtacgaagtgtacaacaactatctccactactctgttttgtgtatgcaatagtacaaga 264  Q
     |||||||   |||||||||| |||||||| ||| ||| |||| || |||||||| ||||||||||||||  |||||||||| |||||||||||||||    
T  268859 ggatgctt---ctttggagaatgttggaaatggataatagtac-aattgtacaaccactatctccactacattgttttgtgtctgcaatagtacaaga 268766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0290 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0290
Description:

Target: scaffold0290; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 70 - 243
Target Start/End: Original strand, 18551 - 18725
Alignment:
Q  70 aagcttcaaaggttgttcaaatgttttaatcacgcctat-cattacagaagactagaagcatgaagtaacggctaattcaaaagaatttgaaggcattag 168  Q
    |||||||||||| |||||||  | ||||||| || |||  |||| ||||||||| ||||  ||||| |||| ||| ||  |||| ||||||||||||| |    
T  18551 aagcttcaaaggctgttcaatggatttaatctcgtctaagcattgcagaagactggaagagtgaagcaacgactattttgaaaggatttgaaggcattgg 18650  T
Q  169 atgcttactctttggagaacgttggaaaaggacaattgtacgaagtgtacaacaactatctccactactctgttt 243  Q
    || |||  |||||| ||| |||||  |||| |||||| ||||||||||||||| |||||||||||||||| ||||    
T  18651 atacttgttctttgaagagcgttgacaaagtacaattttacgaagtgtacaaccactatctccactactcagttt 18725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0337 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0337
Description:

Target: scaffold0337; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 27 - 243
Target Start/End: Complemental strand, 14872 - 14655
Alignment:
Q  27 aagatcatcaggagctgaagatcatcagaaactgaaagaattgaagcttcaaaggttgttcaaatgttttaatcacgcctat-cattacagaagactaga 125  Q
    ||||||| ||| |||| || ||||| || || || |||| || ||||||||||||||||||||  | ||||||| || |||  |||| ||||||||| ||    
T  14872 aagatcaccagaagctaaaaatcattaggaaatgcaagacttaaagcttcaaaggttgttcaatggatttaatctcgtctaagcattgcagaagactgga 14773  T
Q  126 agcatgaagtaacggctaattcaaaagaatttgaaggcattagatgcttactctttggagaacgttggaaaaggacaattgtacgaagtgtacaacaact 225  Q
    ||  ||||| |||  ||| ||  |||| ||||||||||||| |||||||   ||||| ||| |||||  |||| |||||| ||||||||||||||| |||    
T  14772 agagtgaagcaacaactattttgaaaggatttgaaggcattggatgcttgtactttgaagagcgttgacaaagtacaattttacgaagtgtacaaccact 14673  T
Q  226 atctccactactctgttt 243  Q
    | ||||||||||| ||||    
T  14672 acctccactactcagttt 14655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 50; Significance: 1e-19; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 159 - 264
Target Start/End: Complemental strand, 790 - 686
Alignment:
Q  159 aaggcattagatgcttactctttggagaacgttggaaaaggacaattgtacgaagtgtacaacaactatctccactactctgttttgtgtatgcaatagt 258  Q
    |||||||| |||||||| |||||| ||| |||| |||||||||||| |||| || |||||||| | ||||||||||||||| | |||||| |||||||||    
T  790 aaggcattggatgcttattctttgaagagcgttcgaaaaggacaatagtac-aattgtacaaccattatctccactactctatgttgtgtctgcaatagt 692  T
Q  259 acaaga 264  Q
    ||||||    
T  691 acaaga 686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 110 - 244
Target Start/End: Original strand, 90026 - 90160
Alignment:
Q  110 attacagaagactagaagcatgaagtaacggctaattcaaaagaatttgaaggcattagatgcttactctttggagaacgttggaaaaggacaattgtac 209  Q
    ||||||||||||| ||||  ||||  |||||||| ||  |||| ||||||||||||| |||||||  ||||   ||| |||||  |||  |||| |||||    
T  90026 attacagaagactggaagagtgaaccaacggctattttgaaaggatttgaaggcattggatgcttgttcttcaaagagcgttgacaaaatacaagtgtac 90125  T
Q  210 gaagtgtacaacaactatctccactactctgtttt 244  Q
    ||||||||||||  ||| |||||||||||||||||    
T  90126 gaagtgtacaacccctacctccactactctgtttt 90160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 148 - 244
Target Start/End: Complemental strand, 212456 - 212360
Alignment:
Q  148 aaaagaatttgaaggcattagatgcttactctttggagaacgttggaaaaggacaattgtacgaagtgtacaacaactatctccactactctgtttt 244  Q
    ||||| ||||||| ||||| |||||||  |||||| ||| |||||  |||| |||||||||||||||||||||| |||| |||||||||||||||||    
T  212456 aaaaggatttgaaagcattggatgcttgttctttgaagagcgttgacaaagtacaattgtacgaagtgtacaaccactacctccactactctgtttt 212360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 48; Significance: 2e-18; HSPs: 2)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 136 - 243
Target Start/End: Complemental strand, 74695 - 74588
Alignment:
Q  136 aacggctaattcaaaagaatttgaaggcattagatgcttactctttggagaacgttggaaaaggacaattgtacgaagtgtacaacaactatctccacta 235  Q
    ||||||||||||||||| ||||||||| ||||||||||| ||||||| | | | |||  |||| ||||||||| |||||||||||| |||| ||| ||||    
T  74695 aacggctaattcaaaaggatttgaaggaattagatgcttgctctttgaaaagcattgacaaagtacaattgtatgaagtgtacaaccactacctctacta 74596  T
Q  236 ctctgttt 243  Q
    || |||||    
T  74595 ctttgttt 74588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 30 - 112
Target Start/End: Complemental strand, 74788 - 74706
Alignment:
Q  30 atcatcaggagctgaagatcatcagaaactgaaagaattgaagcttcaaaggttgttcaaatgttttaatcacgcctatcatt 112  Q
    |||| ||| ||||||| |||||||||| |||  |||||| ||||||||||||||||||||| | |||||||||||||| ||||    
T  74788 atcaccagaagctgaacatcatcagaagctgtgagaattaaagcttcaaaggttgttcaaaggatttaatcacgcctagcatt 74706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0161 (Bit Score: 46; Significance: 3e-17; HSPs: 2)
Name: scaffold0161
Description:

Target: scaffold0161; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 114 - 243
Target Start/End: Original strand, 10083 - 10212
Alignment:
Q  114 cagaagactagaagcatgaagtaacggctaattcaaaagaatttgaaggcattagatgcttactctttggagaacgttggaaaaggacaattgtacgaag 213  Q
    ||||||||||||||  ||||| |||| ||| ||  |||| ||||||||||||| |||||||  | |||  ||| |||||  |||| ||||||||||||||    
T  10083 cagaagactagaagagtgaagcaacgactattttgaaaggatttgaaggcattggatgcttgttttttaaagagcgttgacaaagtacaattgtacgaag 10182  T
Q  214 tgtacaacaactatctccactactctgttt 243  Q
    ||||| || |||| ||||||||||||||||    
T  10183 tgtacgaccactacctccactactctgttt 10212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0161; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 195 - 243
Target Start/End: Original strand, 14828 - 14876
Alignment:
Q  195 aaaggacaattgtacgaagtgtacaacaactatctccactactctgttt 243  Q
    |||| ||||||||||||||||||| || |||| ||||||||||||||||    
T  14828 aaagtacaattgtacgaagtgtacgaccactacctccactactctgttt 14876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0771 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0771
Description:

Target: scaffold0771; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 27 - 238
Target Start/End: Complemental strand, 699 - 487
Alignment:
Q  27 aagatcatcaggagctgaagatcatcagaaactgaaagaattgaagcttcaaaggttgttcaaatgttttaatcacgcctat-cattacagaagactaga 125  Q
    ||||||| ||| |||| ||| ||||||| |  || |||| || |||| ||||||| ||||||| || ||||||| || |||  |||| ||||||||| ||    
T  699 aagatcaccagaagctaaagctcatcaggagatgcaagacttaaagcgtcaaaggatgttcaattgatttaatctcgtctaagcattgcagaagactgga 600  T
Q  126 agcatgaagtaacggctaattcaaaagaatttgaaggcattagatgcttactctttggagaacgttggaaaaggacaattgtacgaagtgtacaacaact 225  Q
    |   ||||| |||| ||| ||  |||| ||||||||||||| |||||||  |||||| ||| |||||  | || |||||||||||||||||||||| | |    
T  599 atagtgaagcaacgactattttgaaaggatttgaaggcattggatgcttgttctttgaagagcgttgacatagtacaattgtacgaagtgtacaaccatt 500  T
Q  226 atctccactactc 238  Q
    ||||||| |||||    
T  499 atctccattactc 487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0065 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 70 - 237
Target Start/End: Complemental strand, 1871 - 1703
Alignment:
Q  70 aagcttcaaaggttgttcaaatgttttaatcacgcctat-cattacagaagactagaagcatgaagtaacggctaattcaaaagaatttgaaggcattag 168  Q
    ||||||||||||||||||||  | ||||||| || |||  |||| ||||||||| || |  ||||| |||  ||| ||  |||| ||||||||||||| |    
T  1871 aagcttcaaaggttgttcaatggatttaatctcgtctaagcattgcagaagactggaggagtgaagcaacaactattttgaaaggatttgaaggcattgg 1772  T
Q  169 atgcttactctttggagaacgttggaaaaggacaattgtacgaagtgtacaacaactatctccactact 237  Q
    ||||||   ||||| ||| |||||  |||| |||||||||||||||||||||| |||| ||||||||||    
T  1771 atgcttgtactttgaagagcgttgacaaagtacaattgtacgaagtgtacaaccactacctccactact 1703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0227 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0227
Description:

Target: scaffold0227; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 70 - 244
Target Start/End: Complemental strand, 22857 - 22682
Alignment:
Q  70 aagcttcaaaggttgttcaaatgttttaatcacgcctat-cattacagaagactagaagcatgaagtaacggctaattcaaaagaatttgaaggcattag 168  Q
    ||||||||||||||||||||  | ||||||| || |||  |||| ||||||||| |||   ||||| |||| ||| ||  |||| ||||||||||||| |    
T  22857 aagcttcaaaggttgttcaatggatttaatctcgtctaagcattgcagaagactggaaaagtgaagcaacgactattttgaaaggatttgaaggcattgg 22758  T
Q  169 atgcttactctttggagaacgttggaaaaggacaattgtacgaagtgtacaacaactatctccactactctgtttt 244  Q
    ||||||| ||||   |||  ||||  |||| ||||||||| |||| ||||||| |||| |||||||||||||||||    
T  22757 atgcttattcttcaaagagtgttgacaaagtacaattgtatgaagcgtacaaccactacctccactactctgtttt 22682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217 (Bit Score: 44; Significance: 4e-16; HSPs: 3)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 109 - 244
Target Start/End: Complemental strand, 19172 - 19037
Alignment:
Q  109 cattacagaagactagaagcatgaagtaacggctaattcaaaagaatttgaaggcattagatgcttactctttggagaacgttggaaaaggacaattgta 208  Q
    |||| ||||||||| ||||  ||||| |||||||| ||   ||| |||| |||||||| |||||||  ||||   ||| ||||||||||| |||| ||||    
T  19172 cattgcagaagactggaagagtgaagcaacggctattttggaaggatttaaaggcatttgatgcttgttcttcaaagagcgttggaaaagtacaagtgta 19073  T
Q  209 cgaagtgtacaacaactatctccactactctgtttt 244  Q
    ||||||||||||| |||| ||||||||||| |||||    
T  19072 cgaagtgtacaaccactacctccactactcagtttt 19037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 205 - 244
Target Start/End: Complemental strand, 9605 - 9566
Alignment:
Q  205 tgtacgaagtgtacaacaactatctccactactctgtttt 244  Q
    ||||||||||||||||| ||||||||||||||||||||||    
T  9605 tgtacgaagtgtacaaccactatctccactactctgtttt 9566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 204 - 244
Target Start/End: Original strand, 22196 - 22236
Alignment:
Q  204 ttgtacgaagtgtacaacaactatctccactactctgtttt 244  Q
    |||||||||||||||||| |||||||||| |||||||||||    
T  22196 ttgtacgaagtgtacaaccactatctccagtactctgtttt 22236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120 (Bit Score: 44; Significance: 4e-16; HSPs: 2)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 109 - 244
Target Start/End: Original strand, 36745 - 36880
Alignment:
Q  109 cattacagaagactagaagcatgaagtaacggctaattcaaaagaatttgaaggcattagatgcttactctttggagaacgttggaaaaggacaattgta 208  Q
    |||| |||| ||||||||   ||||| |||| ||||||  |||| ||||||||||||| |||||||  |||||  |||  ||||  |||| |||||||||    
T  36745 cattgcagatgactagaaaagtgaagcaacgactaatttgaaaggatttgaaggcattggatgcttgttctttaaagagtgttgacaaagaacaattgta 36844  T
Q  209 cgaagtgtacaacaactatctccactactctgtttt 244  Q
    ||||||||||||| |||| ||| |||||||||||||    
T  36845 cgaagtgtacaaccactacctctactactctgtttt 36880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 109 - 244
Target Start/End: Complemental strand, 42260 - 42125
Alignment:
Q  109 cattacagaagactagaagcatgaagtaacggctaattcaaaagaatttgaaggcattagatgcttactctttggagaacgttggaaaaggacaattgta 208  Q
    |||| |||| ||||||||   ||||| |||| ||||||  |||| ||||||||||||| |||||||  |||||  |||  ||||  |||| |||||||||    
T  42260 cattgcagatgactagaaaagtgaagcaacgactaatttgaaaggatttgaaggcattggatgcttgttctttaaagagtgttgacaaagaacaattgta 42161  T
Q  209 cgaagtgtacaacaactatctccactactctgtttt 244  Q
    ||||||||||||| |||| ||| |||||||||||||    
T  42160 cgaagtgtacaaccactacctctactactctgtttt 42125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0359 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0359
Description:

Target: scaffold0359; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 157 - 243
Target Start/End: Original strand, 5708 - 5794
Alignment:
Q  157 tgaaggcattagatgcttactctttggagaacgttggaaaaggacaattgtacgaagtgtacaacaactatctccactactctgttt 243  Q
    |||||||||| |||||||  |||||  ||| |||||  |||| |||||||||||||||||||||| |||||||||||||||| ||||    
T  5708 tgaaggcattggatgcttgttcttttaagagcgttgacaaagtacaattgtacgaagtgtacaactactatctccactactcagttt 5794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 27 - 244
Target Start/End: Original strand, 27316 - 27534
Alignment:
Q  27 aagatcatcaggagctgaagatcatcagaaactgaaagaattgaagcttcaaaggttgttcaaatgttttaatcacgcctat-cattacagaagactaga 125  Q
    ||||||| |||  ||||||| ||||||| |  || |||| || ||||||||||||||||||||    ||||||| || |||  |||| |||||||||  |    
T  27316 aagatcaccagatgctgaagttcatcaggagatgcaagacttaaagcttcaaaggttgttcaatgaatttaatctcgtctaagcattgcagaagactgaa 27415  T
Q  126 agcatgaagtaacggctaattcaaaagaatttgaaggcattagatgcttactctttggagaacgttggaaaaggacaattgtacgaagtgtacaacaact 225  Q
    ||  ||||| ||| |||| ||  | || ||| ||||||||| ||||||| |||||   ||| |||||  |||| || ||||||||||||||||||| |||    
T  27416 agagtgaagcaacagctattttgataggattcgaaggcattggatgcttgctcttcaaagagcgttgacaaagtaccattgtacgaagtgtacaaccact 27515  T
Q  226 atctccactactctgtttt 244  Q
    | |||||||||||||||||    
T  27516 acctccactactctgtttt 27534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 114 - 244
Target Start/End: Original strand, 215472 - 215602
Alignment:
Q  114 cagaagactagaagcatgaagtaacggctaattcaaaagaatttgaaggcattagatgcttactctttggagaacgttggaaaaggacaattgtacgaag 213  Q
    |||||||||||||   ||||| |||||||| ||  |||| ||||||||||||| |||||||  ||||   ||| |||||  |||| ||  ||||||||||    
T  215472 cagaagactagaaaagtgaagcaacggctattttgaaaggatttgaaggcattggatgcttgttcttcaaagagcgttgacaaagtacgtttgtacgaag 215571  T
Q  214 tgtacaacaactatctccactactctgtttt 244  Q
    |||||||| |||| |||||||||||||||||    
T  215572 tgtacaaccactacctccactactctgtttt 215602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0426 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0426
Description:

Target: scaffold0426; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 149 - 243
Target Start/End: Complemental strand, 13672 - 13578
Alignment:
Q  149 aaagaatttgaaggcattagatgcttactctttggagaacgttggaaaaggacaattgtacgaagtgtacaacaactatctccactactctgttt 243  Q
    |||| ||||||||||||| |||| ||  |||||| ||| |||||  | || |||||||||| ||||||||||| |||||||||||||||| ||||    
T  13672 aaaggatttgaaggcattggatgtttgttctttgaagagcgttgacatagtacaattgtacaaagtgtacaaccactatctccactactcagttt 13578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083 (Bit Score: 38; Significance: 0.000000000002; HSPs: 2)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 27 - 243
Target Start/End: Original strand, 25862 - 26079
Alignment:
Q  27 aagatcatcaggagctgaagatcatcagaaactgaaagaattgaagcttcaaaggttgttcaaatgttttaatcacgcctat-cattacagaagactaga 125  Q
    ||||||| ||| |||| ||| ||||||| |  || |||| || |||| |||||||||||||||  | ||||||| || |||  |||| || |||||| ||    
T  25862 aagatcaccagaagctaaagctcatcaggagatgcaagacttaaagcgtcaaaggttgttcaatggatttaatctcgtctaagcattgcaaaagactgga 25961  T
Q  126 agcatgaagtaacggctaattcaaaagaatttgaaggcattagatgcttactctttggagaacgttggaaaaggacaattgtacgaagtgtacaacaact 225  Q
    |   ||||| |||| ||| ||  |||| ||||||||||||| |||||||  |||||| |||  ||||  | || ||||||||| |||||||||||| |||    
T  25962 aaagtgaagcaacgactattttgaaaggatttgaaggcattggatgcttgttctttgaagagggttgacatagtacaattgtatgaagtgtacaaccact 26061  T
Q  226 atctccactactctgttt 243  Q
    ||||| ||||||| ||||    
T  26062 atctcgactactcagttt 26079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 149 - 217
Target Start/End: Original strand, 44714 - 44782
Alignment:
Q  149 aaagaatttgaaggcattagatgcttactctttggagaacgttggaaaaggacaattgtacgaagtgta 217  Q
    |||| |||||||||||||||||||||  |||||| ||| |||||  | |  ||||||||||||||||||    
T  44714 aaaggatttgaaggcattagatgcttgttctttgaagagcgttgacataatacaattgtacgaagtgta 44782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1359 (Bit Score: 37; Significance: 0.000000000006; HSPs: 2)
Name: scaffold1359
Description:

Target: scaffold1359; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 204 - 244
Target Start/End: Original strand, 1820 - 1860
Alignment:
Q  204 ttgtacgaagtgtacaacaactatctccactactctgtttt 244  Q
    |||||||||||||||||| ||||||||||||||||||||||    
T  1820 ttgtacgaagtgtacaaccactatctccactactctgtttt 1860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1359; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 149 - 244
Target Start/End: Original strand, 665 - 760
Alignment:
Q  149 aaagaatttgaaggcattagatgcttactctttggagaacgttggaaaaggacaattgtacgaagtgtacaacaactatctccactactctgtttt 244  Q
    |||| ||||||||||||| |||||||  ||||   ||| |||||  |||| ||  |||||| ||||||||||| |||| |||||||||||||||||    
T  665 aaaggatttgaaggcattggatgcttgttcttcaaagagcgttgacaaagtacgtttgtactaagtgtacaaccactacctccactactctgtttt 760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0622 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0622
Description:

Target: scaffold0622; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 152 - 264
Target Start/End: Complemental strand, 2754 - 2643
Alignment:
Q  152 gaatttgaaggcattagatgcttactctttggagaacgttggaaaaggacaattgtacgaagtgtacaacaactatctccactactctgttttgtgtatg 251  Q
    ||||| ||||||||| ||| ||||  |||  |||| || ||||||||||||||  ||| |  |||||||| |||||||| |||||||| |||||||| ||    
T  2754 gaattggaaggcattggatacttatacttgcgagagcggtggaaaaggacaatattac-agttgtacaaccactatctctactactctattttgtgtctg 2656  T
Q  252 caatagtacaaga 264  Q
    |||||||||||||    
T  2655 caatagtacaaga 2643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0414 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0414
Description:

Target: scaffold0414; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 204 - 244
Target Start/End: Original strand, 7221 - 7261
Alignment:
Q  204 ttgtacgaagtgtacaacaactatctccactactctgtttt 244  Q
    |||||||||||||||||| ||||||||||||||||||||||    
T  7221 ttgtacgaagtgtacaaccactatctccactactctgtttt 7261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0280 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0280
Description:

Target: scaffold0280; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 204 - 244
Target Start/End: Original strand, 2795 - 2835
Alignment:
Q  204 ttgtacgaagtgtacaacaactatctccactactctgtttt 244  Q
    |||||||||||||||||| ||||||||||||||||||||||    
T  2795 ttgtacgaagtgtacaaccactatctccactactctgtttt 2835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0247 (Bit Score: 37; Significance: 0.000000000006; HSPs: 2)
Name: scaffold0247
Description:

Target: scaffold0247; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 204 - 244
Target Start/End: Original strand, 25464 - 25504
Alignment:
Q  204 ttgtacgaagtgtacaacaactatctccactactctgtttt 244  Q
    |||||||||||||||||| ||||||||||||||||||||||    
T  25464 ttgtacgaagtgtacaaccactatctccactactctgtttt 25504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0247; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 211 - 244
Target Start/End: Original strand, 15811 - 15844
Alignment:
Q  211 aagtgtacaacaactatctccactactctgtttt 244  Q
    ||||||||||| ||||||||||||||||||||||    
T  15811 aagtgtacaaccactatctccactactctgtttt 15844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0146 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0146
Description:

Target: scaffold0146; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 149 - 237
Target Start/End: Complemental strand, 15218 - 15130
Alignment:
Q  149 aaagaatttgaaggcattagatgcttactctttggagaacgttggaaaaggacaattgtacgaagtgtacaacaactatctccactact 237  Q
    |||| ||||||| ||||| |||| ||  |||||| | | |||||  |||| |||||||||||||||||||||| |||||||||||||||    
T  15218 aaaggatttgaaagcattggatgattgttctttgaatagcgttgacaaagtacaattgtacgaagtgtacaaccactatctccactact 15130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 204 - 244
Target Start/End: Complemental strand, 60849 - 60809
Alignment:
Q  204 ttgtacgaagtgtacaacaactatctccactactctgtttt 244  Q
    |||||||||||||||||| ||||||||||||||||||||||    
T  60849 ttgtacgaagtgtacaaccactatctccactactctgtttt 60809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 149 - 244
Target Start/End: Original strand, 78376 - 78471
Alignment:
Q  149 aaagaatttgaaggcattagatgcttactctttggagaacgttggaaaaggacaattgtacgaagtgtacaacaactatctccactactctgtttt 244  Q
    |||| ||||||||||||| |||||||| |||||  ||| |||||  |||| ||  |||||||||||||||||| |||| || ||||||| ||||||    
T  78376 aaaggatttgaaggcattggatgcttattctttaaagagcgttgacaaagtacgtttgtacgaagtgtacaaccactacctacactactatgtttt 78471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0530 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0530
Description:

Target: scaffold0530; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 177 - 234
Target Start/End: Original strand, 2033 - 2090
Alignment:
Q  177 tctttggagaacgttggaaaaggacaattgtacgaagtgtacaacaactatctccact 234  Q
    |||||| ||| |||||  |||| |||||||||||||||||||||| ||||||||||||    
T  2033 tctttgaagagcgttgacaaagtacaattgtacgaagtgtacaaccactatctccact 2090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0251 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0251
Description:

Target: scaffold0251; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 195 - 243
Target Start/End: Complemental strand, 7758 - 7710
Alignment:
Q  195 aaaggacaattgtacgaagtgtacaacaactatctccactactctgttt 243  Q
    |||| |||||||||||||||||||||| |||| ||||||||||| ||||    
T  7758 aaagtacaattgtacgaagtgtacaaccactacctccactactcagttt 7710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0249 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0249
Description:

Target: scaffold0249; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 204 - 244
Target Start/End: Original strand, 17830 - 17870
Alignment:
Q  204 ttgtacgaagtgtacaacaactatctccactactctgtttt 244  Q
    ||||| |||||||||||| ||||||||||||||||||||||    
T  17830 ttgtatgaagtgtacaaccactatctccactactctgtttt 17870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 204 - 244
Target Start/End: Complemental strand, 9201 - 9161
Alignment:
Q  204 ttgtacgaagtgtacaacaactatctccactactctgtttt 244  Q
    |||||||||||||||||| ||||||||||||||| ||||||    
T  9201 ttgtacgaagtgtacaaccactatctccactactgtgtttt 9161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 149 - 244
Target Start/End: Original strand, 5612 - 5707
Alignment:
Q  149 aaagaatttgaaggcattagatgcttactctttggagaacgttggaaaaggacaattgtacgaagtgtacaacaactatctccactactctgtttt 244  Q
    |||| ||||||||||||| |||||||| ||||   ||| |||||  |||| ||| || || |||||||||||| |||| |||||||||| ||||||    
T  5612 aaaggatttgaaggcatttgatgcttattcttcaaagagcgttgacaaagtacatttatatgaagtgtacaaccactacctccactactatgtttt 5707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 109 - 244
Target Start/End: Complemental strand, 103713 - 103578
Alignment:
Q  109 cattacagaagactagaagcatgaagtaacggctaattcaaaagaatttgaaggcattagatgcttactctttggagaacgttggaaaaggacaattgta 208  Q
    |||| ||||||||| ||||  ||||| |||||||| ||  |||  || | |||||||| |||||||  ||||   ||| |||||  |||| |||||||||    
T  103713 cattgcagaagactggaagagtgaagcaacggctattttgaaatgatattaaggcattggatgcttgttcttcaaagagcgttgacaaagtacaattgta 103614  T
Q  209 cgaagtgtacaacaactatctccactactctgtttt 244  Q
    |||||||| |||| |||| |||||||||| ||||||    
T  103613 cgaagtgtgcaaccactacctccactactttgtttt 103578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0352 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0352
Description:

Target: scaffold0352; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 204 - 246
Target Start/End: Original strand, 886 - 928
Alignment:
Q  204 ttgtacgaagtgtacaacaactatctccactactctgttttgt 246  Q
    |||||||||||||||||| ||||  ||||||||||||||||||    
T  886 ttgtacgaagtgtacaaccactacttccactactctgttttgt 928  T

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Target: scaffold0211 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0211
Description:

Target: scaffold0211; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 205 - 243
Target Start/End: Original strand, 15688 - 15726
Alignment:
Q  205 tgtacgaagtgtacaacaactatctccactactctgttt 243  Q
    |||||||||||||| || |||||||||||||||||||||    
T  15688 tgtacgaagtgtacgaccactatctccactactctgttt 15726  T

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Target: scaffold0132 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0132
Description:

Target: scaffold0132; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 206 - 252
Target Start/End: Original strand, 38152 - 38198
Alignment:
Q  206 gtacgaagtgtacaacaactatctccactactctgttttgtgtatgc 252  Q
    ||||||||||||| || |||| ||||||||||||||||||| |||||    
T  38152 gtacgaagtgtacgaccactacctccactactctgttttgtctatgc 38198  T

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Target: scaffold0473 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0473
Description:

Target: scaffold0473; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 204 - 244
Target Start/End: Original strand, 2756 - 2796
Alignment:
Q  204 ttgtacgaagtgtacaacaactatctccactactctgtttt 244  Q
    ||||| |||||||||||| |||| |||||||||||||||||    
T  2756 ttgtatgaagtgtacaaccactaactccactactctgtttt 2796  T

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Target: scaffold0387 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0387
Description:

Target: scaffold0387; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 204 - 244
Target Start/End: Complemental strand, 7427 - 7387
Alignment:
Q  204 ttgtacgaagtgtacaacaactatctccactactctgtttt 244  Q
    |||||||||||||||||| ||||  ||||||||||||||||    
T  7427 ttgtacgaagtgtacaaccactacttccactactctgtttt 7387  T

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Target: scaffold0193 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0193
Description:

Target: scaffold0193; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 156 - 243
Target Start/End: Complemental strand, 15888 - 15800
Alignment:
Q  156 ttgaaggcattagatgcttactctttggagaacgttggaaaaggacaa-ttgtacgaagtgtacaacaactatctccactactctgttt 243  Q
    ||||||||||| |||||||  |||||| ||| |||||  | || |||| |||||||||||||||||| || ||||| ||||||| ||||    
T  15888 ttgaaggcattggatgcttgttctttgaagagcgttgacatagtacaaattgtacgaagtgtacaaccaccatctctactactcagttt 15800  T

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Target: scaffold0016 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 204 - 244
Target Start/End: Complemental strand, 770 - 730
Alignment:
Q  204 ttgtacgaagtgtacaacaactatctccactactctgtttt 244  Q
    |||||||||||||||||  ||||||| ||||||||||||||    
T  770 ttgtacgaagtgtacaatcactatctgcactactctgtttt 730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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