View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19282_high_9 (Length: 236)
Name: NF19282_high_9
Description: NF19282
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19282_high_9 |
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Alignment Details
Target: chr7 (Bit Score: 172; Significance: 1e-92; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 172; E-Value: 1e-92
Query Start/End: Original strand, 1 - 222
Target Start/End: Original strand, 39941386 - 39941606
Alignment:
| Q |
1 |
cttgaaattttacttgtaaaattcaactagtgctcaaacaannnnnnnnatggatagggaaatatattgatttaaaagtgatgcacttaatataaa-cta |
99 |
Q |
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| T |
39941386 |
cttgaaattttacttgtaaaattcaactagtgttcaaacaattttttttatggatagggaaatatattgatttaaaagtgatgcacttaatataaaacta |
39941485 |
T |
|
| Q |
100 |
aaggataactgaaaagcaaatgaaaaagcaaataataatgttatgttgaaaattgaaatgcatgttaggacaatttctttatgtcaatgtgacactcata |
199 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |
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| T |
39941486 |
aaggataactgaaaagcaaatgaaaaagcaaataataatgttatgttgaaaattgaaattcatgttaggacaatttctttatgtcaatgtgacactcata |
39941585 |
T |
|
| Q |
200 |
atgagattttcagtattagttta |
222 |
Q |
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|||||| ||||||||||||||| |
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| T |
39941586 |
atgaga--ttcagtattagttta |
39941606 |
T |
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