View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19282_low_8 (Length: 240)
Name: NF19282_low_8
Description: NF19282
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19282_low_8 |
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Alignment Details
Target: chr7 (Bit Score: 224; Significance: 1e-123; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 1 - 224
Target Start/End: Complemental strand, 41919310 - 41919087
Alignment:
| Q |
1 |
agtatgaaatgagtccaacattaaatttgcacatgcaattgccggtattagcagaagagtagtaaaaggaggatgaagaagcactataagaataatgatg |
100 |
Q |
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| T |
41919310 |
agtatgaaatgagtccaacattaaatttgcacatgcaattgccggtattagcagaagagtagtaaaaggaggatgaagaagcactataagaataatgatg |
41919211 |
T |
|
| Q |
101 |
atatcaacaaccacaataattccaacaacggtgttgttgatgtgtaagacagcaatgctctttcaaatagtacacatgcatgtttcaagcattgccctcc |
200 |
Q |
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| T |
41919210 |
atatcaacaaccacaataattccaacaacggtgttgttgatgtgtaagacagcaatgctctttcaaatagtacacatgcatgtttcaagcattgccctcc |
41919111 |
T |
|
| Q |
201 |
ataaataaatcaacaataataatg |
224 |
Q |
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|||||||||||||||||||||||| |
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| T |
41919110 |
ataaataaatcaacaataataatg |
41919087 |
T |
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