View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19285_low_4 (Length: 486)
Name: NF19285_low_4
Description: NF19285
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19285_low_4 |
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Alignment Details
Target: chr4 (Bit Score: 443; Significance: 0; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 443; E-Value: 0
Query Start/End: Original strand, 24 - 470
Target Start/End: Original strand, 51112663 - 51113109
Alignment:
| Q |
24 |
tgcatagctttcgtcagcagcataatgtttggtcttttcagaagcatcagtggcataatctctgattttcttagaagcatcccaagcatagcctttggtt |
123 |
Q |
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|||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
51112663 |
tgcatagctttcgtcagcagcataatgtttggtcttctcagaagcatcagtggcataatctctgattttcttagaagcatcccaagcatagcctttggtt |
51112762 |
T |
|
| Q |
124 |
ttctcagcagcatcatgggcatggtcactggctttttgagcagtttccttggacttgtgtgcagtttcatctgcatagtgtttggttttgtgtgcagcgt |
223 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
51112763 |
ttctcagcagcatcatgggcatggtcactggctttttgagcagtttccttggacttgtgtgcagtttcatctgcatagtgtttggttttgtgtgcagcgt |
51112862 |
T |
|
| Q |
224 |
ctgaagcatattcagaggctttatcagtggtggtgctgtccttatctttgtctttgaagccaaggccttcggtgattttctctttggcccactcagtcca |
323 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
51112863 |
ctgaagcatattcagaggctttatcagtggtggtgctgtccttatctttgtctttgaagccaaggccttcggtgattttctctttggcccactcagtcca |
51112962 |
T |
|
| Q |
324 |
tgtctctgcggcttctttcccttcttttcctgtttctgatgctttgtttgcagtttccatggtcttggctttcacatcttgaaaatcacgaccttcatct |
423 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
51112963 |
tgtctctgcggcttctttcccttcttttcctgtttctgatgctttgtttgcagtttccatggtcttggctttcacatcttgaaaatcacgaccttcatct |
51113062 |
T |
|
| Q |
424 |
tcatttgagggaatgtgaccaacactagaggatttacagttaatagt |
470 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
51113063 |
tcatttgagggaatgtgaccaacactagaggatttacagttaatagt |
51113109 |
T |
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