View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19285_low_8 (Length: 414)
Name: NF19285_low_8
Description: NF19285
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19285_low_8 |
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Alignment Details
Target: chr5 (Bit Score: 151; Significance: 9e-80; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 151; E-Value: 9e-80
Query Start/End: Original strand, 5 - 182
Target Start/End: Complemental strand, 35589005 - 35588819
Alignment:
| Q |
5 |
tccttgttgttctcatcctaatccttattgttcctatcaattagtttagctttcctatacattagtttagcttcctcttagtttggtttttctgttaata |
104 |
Q |
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| T |
35589005 |
tccttgttgttctcatcctaatccttattgttcctatcaattagtttagctttcctatacattagttcagcttcctcttagtttggtttttctgttaata |
35588906 |
T |
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| Q |
105 |
cttgtacag---------ctgtgatttattcatcaatatacataacaaaaacttctatcaatttgctctctgcatactttctttaca |
182 |
Q |
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||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35588905 |
cttgtacagtatattaacctgtgatttattcatcaatatacataacaaaaacttctatcaatttgctctctgcatactttctttaca |
35588819 |
T |
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