View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19286_low_3 (Length: 250)
Name: NF19286_low_3
Description: NF19286
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19286_low_3 |
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Alignment Details
Target: chr6 (Bit Score: 179; Significance: 1e-96; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 10 - 239
Target Start/End: Original strand, 1822540 - 1822770
Alignment:
| Q |
10 |
aagcattttctcttaaatatatcccacattggtagcttataaacattgagaggacaccttatctataaattggtagtggact-cacattttaaatcgcaa |
108 |
Q |
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| T |
1822540 |
aagcattttctcttacatatgtcccacatcggtagcttataaacatggagaggacaccttatctataaactggtagtggactgcacgttttaaatcgcaa |
1822639 |
T |
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| Q |
109 |
cctaatgcagattcaatgcacttaatttgaataaatcaaatctttgaagattttttcaatctaatgtcattttgcttatttaaaagctattttactatga |
208 |
Q |
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| T |
1822640 |
ccaaatgcagattcaatgcacttaatttgaataaatcaaatctttgaagataatttcaatctaatgtcattttgcttatttaaaagctattttactttga |
1822739 |
T |
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| Q |
209 |
gattgagattatttcaaatatttgttttcat |
239 |
Q |
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| T |
1822740 |
gattgagattatttcaaaaatttgttttcat |
1822770 |
T |
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