View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19288_high_8 (Length: 236)
Name: NF19288_high_8
Description: NF19288
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19288_high_8 |
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Alignment Details
Target: chr2 (Bit Score: 197; Significance: 1e-107; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 4 - 221
Target Start/End: Original strand, 42118369 - 42118588
Alignment:
| Q |
4 |
ttgttttttcaatctcgtccccgaaagagggtgtgc--agaaaaatgctcattacataagccacaatatattgaaggacggatttttaatcataacttcc |
101 |
Q |
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| T |
42118369 |
ttgttttttcaatctcgtccccgaaagagggtgtgagaagaaaaatgctcattacataagccacaatatattgaaggacggatttttaatcataacttcc |
42118468 |
T |
|
| Q |
102 |
ttactaccacgtgaaaggttcttgataataataagtgagtaataaaagtggcatacctacaaatattgactccatgaaggtcaccctttctgtttgcttg |
201 |
Q |
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||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
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| T |
42118469 |
ttactaccacgtgaaaggttcttgataataataagtgagtaatgaaagtggcatacctacaaatattgactccatgaaggtcaccctttctgttagcttg |
42118568 |
T |
|
| Q |
202 |
cttaatctatatgctaataa |
221 |
Q |
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|||||||||||||||||||| |
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| T |
42118569 |
cttaatctatatgctaataa |
42118588 |
T |
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