View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19288_low_8 (Length: 251)

Name: NF19288_low_8
Description: NF19288
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19288_low_8
NF19288_low_8
[»] chr5 (14 HSPs)
chr5 (10-150)||(42897374-42897514)
chr5 (10-150)||(36982346-36982486)
chr5 (10-150)||(14044216-14044355)
chr5 (10-150)||(36767876-36768014)
chr5 (34-150)||(5712600-5712716)
chr5 (10-150)||(2970666-2970805)
chr5 (30-136)||(33404409-33404515)
chr5 (117-153)||(14044053-14044089)
chr5 (117-152)||(36982184-36982219)
chr5 (118-150)||(36768857-36768889)
chr5 (115-150)||(5213148-5213183)
chr5 (115-150)||(37304371-37304406)
chr5 (117-151)||(33403193-33403227)
chr5 (124-156)||(1780942-1780974)
[»] chr4 (27 HSPs)
chr4 (10-153)||(39788153-39788296)
chr4 (10-152)||(40071447-40071589)
chr4 (11-150)||(17493914-17494053)
chr4 (10-152)||(54438155-54438297)
chr4 (10-153)||(34408654-34408797)
chr4 (10-153)||(37064750-37064893)
chr4 (10-147)||(33800786-33800923)
chr4 (1-150)||(51744519-51744668)
chr4 (10-153)||(47199646-47199789)
chr4 (10-150)||(20789833-20789972)
chr4 (10-150)||(925136-925276)
chr4 (10-150)||(32217937-32218077)
chr4 (10-150)||(21240486-21240626)
chr4 (34-150)||(10441517-10441631)
chr4 (8-140)||(52101206-52101338)
chr4 (10-92)||(53509700-53509782)
chr4 (10-88)||(28910220-28910296)
chr4 (100-149)||(28689666-28689715)
chr4 (117-151)||(17493752-17493786)
chr4 (117-150)||(10441143-10441176)
chr4 (117-150)||(34408924-34408957)
chr4 (117-150)||(40071716-40071749)
chr4 (5-85)||(46870762-46870840)
chr4 (117-150)||(54438424-54438457)
chr4 (117-152)||(925403-925438)
chr4 (117-150)||(51744751-51744784)
chr4 (114-150)||(10385073-10385109)
[»] chr3 (21 HSPs)
chr3 (10-150)||(40496933-40497073)
chr3 (10-152)||(51545822-51545964)
chr3 (10-150)||(48169884-48170024)
chr3 (10-150)||(13542792-13542932)
chr3 (10-150)||(41346207-41346347)
chr3 (11-150)||(54014398-54014537)
chr3 (10-150)||(50676634-50676773)
chr3 (10-123)||(24709170-24709283)
chr3 (10-148)||(48737686-48737824)
chr3 (30-150)||(30462848-30462967)
chr3 (117-153)||(54014234-54014270)
chr3 (117-150)||(30459806-30459839)
chr3 (117-150)||(41346047-41346080)
chr3 (117-150)||(50676475-50676508)
chr3 (117-152)||(12568275-12568310)
chr3 (117-152)||(13544739-13544774)
chr3 (115-150)||(34827322-34827357)
chr3 (115-150)||(38492052-38492087)
chr3 (117-152)||(51545660-51545695)
chr3 (117-150)||(40496773-40496806)
chr3 (117-150)||(48169724-48169757)
[»] chr2 (23 HSPs)
chr2 (10-150)||(29194148-29194288)
chr2 (10-151)||(2110380-2110521)
chr2 (10-155)||(43370834-43370979)
chr2 (10-150)||(28585683-28585823)
chr2 (10-150)||(8381316-8381456)
chr2 (10-150)||(45080420-45080558)
chr2 (10-145)||(4828094-4828229)
chr2 (46-150)||(30422588-30422692)
chr2 (30-155)||(31921616-31921741)
chr2 (10-149)||(1779073-1779212)
chr2 (10-126)||(9370534-9370650)
chr2 (35-154)||(25898766-25898884)
chr2 (10-150)||(43377208-43377346)
chr2 (30-91)||(39646365-39646426)
chr2 (117-154)||(43370670-43370707)
chr2 (117-151)||(2110219-2110253)
chr2 (117-151)||(25898462-25898496)
chr2 (10-127)||(16970316-16970431)
chr2 (117-150)||(29193988-29194021)
chr2 (117-150)||(45080685-45080718)
chr2 (115-150)||(7443117-7443152)
chr2 (117-148)||(28585950-28585981)
chr2 (116-156)||(20917723-20917763)
[»] chr8 (17 HSPs)
chr8 (10-150)||(18575188-18575328)
chr8 (10-153)||(11254660-11254803)
chr8 (10-150)||(17493686-17493826)
chr8 (10-150)||(27820933-27821073)
chr8 (10-147)||(38069898-38070035)
chr8 (10-151)||(39907068-39907209)
chr8 (10-150)||(12738366-12738506)
chr8 (30-150)||(11147829-11147949)
chr8 (10-91)||(17336029-17336110)
chr8 (10-151)||(9753930-9754070)
chr8 (117-151)||(18575027-18575061)
chr8 (117-150)||(11254500-11254533)
chr8 (117-151)||(38070162-38070196)
chr8 (10-122)||(13243575-13243686)
chr8 (117-150)||(17493526-17493559)
chr8 (117-150)||(27820773-27820806)
chr8 (115-151)||(1580991-1581027)
[»] chr1 (20 HSPs)
chr1 (10-150)||(50777157-50777297)
chr1 (10-153)||(1929214-1929357)
chr1 (10-150)||(46862716-46862856)
chr1 (149-242)||(37526295-37526388)
chr1 (10-147)||(39150900-39151037)
chr1 (10-150)||(38321805-38321941)
chr1 (23-146)||(46371094-46371217)
chr1 (10-150)||(28036700-28036841)
chr1 (10-150)||(32045993-32046133)
chr1 (10-150)||(1207452-1207592)
chr1 (10-148)||(8229223-8229362)
chr1 (10-150)||(40562436-40562574)
chr1 (117-154)||(46370923-46370960)
chr1 (117-153)||(46862553-46862589)
chr1 (118-150)||(8229063-8229095)
chr1 (117-150)||(1929483-1929516)
chr1 (10-150)||(9129401-9129542)
chr1 (117-150)||(32045833-32045866)
chr1 (117-150)||(38321645-38321678)
chr1 (117-150)||(39151164-39151197)
[»] scaffold0519 (2 HSPs)
scaffold0519 (10-153)||(10590-10733)
scaffold0519 (117-150)||(10860-10893)
[»] chr6 (16 HSPs)
chr6 (10-155)||(28541582-28541727)
chr6 (10-150)||(12350432-12350572)
chr6 (10-151)||(16435939-16436076)
chr6 (10-141)||(29182751-29182882)
chr6 (10-151)||(30736579-30736720)
chr6 (10-150)||(1241269-1241408)
chr6 (10-156)||(31013489-31013635)
chr6 (10-148)||(13042132-13042268)
chr6 (10-119)||(7271109-7271218)
chr6 (12-119)||(13210506-13210610)
chr6 (10-89)||(1870694-1870771)
chr6 (115-150)||(18991904-18991939)
chr6 (114-152)||(2913122-2913160)
chr6 (117-150)||(1241109-1241142)
chr6 (117-150)||(13041972-13042005)
chr6 (117-150)||(29182591-29182624)
[»] chr7 (23 HSPs)
chr7 (10-150)||(40232115-40232255)
chr7 (10-152)||(4041107-4041249)
chr7 (10-151)||(27596085-27596226)
chr7 (10-150)||(6392431-6392571)
chr7 (16-142)||(31689361-31689487)
chr7 (10-150)||(25943649-25943787)
chr7 (10-139)||(29737565-29737694)
chr7 (10-151)||(41427647-41427788)
chr7 (30-150)||(22338148-22338268)
chr7 (10-90)||(38276605-38276685)
chr7 (44-133)||(24300171-24300260)
chr7 (30-141)||(22619930-22620041)
chr7 (8-144)||(21442806-21442940)
chr7 (117-150)||(22337710-22337743)
chr7 (117-150)||(27596352-27596385)
chr7 (117-150)||(29737405-29737438)
chr7 (117-148)||(25943912-25943943)
chr7 (117-151)||(4040946-4040980)
chr7 (100-150)||(7380535-7380585)
chr7 (117-150)||(22619524-22619557)
chr7 (117-150)||(31689620-31689653)
chr7 (117-150)||(40232382-40232415)
chr7 (117-153)||(24300411-24300447)
[»] scaffold0016 (2 HSPs)
scaffold0016 (10-150)||(92169-92309)
scaffold0016 (117-153)||(92387-92423)
[»] scaffold0061 (1 HSPs)
scaffold0061 (10-150)||(10017-10157)
[»] scaffold0047 (2 HSPs)
scaffold0047 (10-150)||(69913-70053)
scaffold0047 (117-150)||(69753-69786)
[»] scaffold0532 (1 HSPs)
scaffold0532 (10-150)||(3974-4114)
[»] scaffold0318 (2 HSPs)
scaffold0318 (10-147)||(16517-16641)
scaffold0318 (117-150)||(16357-16390)
[»] scaffold1194 (1 HSPs)
scaffold1194 (10-151)||(1130-1268)
[»] scaffold0459 (1 HSPs)
scaffold0459 (115-155)||(12747-12787)
[»] scaffold0366 (2 HSPs)
scaffold0366 (115-155)||(10388-10428)
scaffold0366 (115-155)||(14054-14094)


Alignment Details
Target: chr5 (Bit Score: 116; Significance: 4e-59; HSPs: 14)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 10 - 150
Target Start/End: Complemental strand, 42897514 - 42897374
Alignment:
Q  10 cattacttaaaagtgaaaaagtttcaaaataatgacaagggtaactcagtaaaagtatcactctctttctttcatctttacacnnnnnnnaatctgtgtg 109  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||       ||||||||||    
T  42897514 cattacttaaaagtgaaaaagtttcaaaataatgacaagggcaactcagtaaaagtatcactctctttctttcatctttacacttttcttaatctgtgtg 42897415  T
Q  110 aaatggtcaaataggtcacttattcagggacggagggagta 150  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  42897414 aaatggtcaaataggtcacttattcagggacggagggagta 42897374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 10 - 150
Target Start/End: Original strand, 36982346 - 36982486
Alignment:
Q  10 cattacttaaaagtgaaaaagtttcaaaataatgacaagggtaactcagtaaaagtatcactctctttctttcatctttacacnnnnnnnaatctgtgtg 109  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||       ||||||||||    
T  36982346 cattacttaaaagtgaaaaagtttcaaaataatgacaagggcaactcagtaaaagtatcactctttttctttcatctttacacttttcttaatctgtgtg 36982445  T
Q  110 aaatggtcaaataggtcacttattcagggacggagggagta 150  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  36982446 aaatggtcaaataggtcacttattcagggacggagggagta 36982486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 10 - 150
Target Start/End: Original strand, 14044216 - 14044355
Alignment:
Q  10 cattacttaaaagtgaaaaagtttcaaaataatgacaagggtaactcagtaaaagtatcactctctttctttcatctttacacnnnnnnnaatctgtgtg 109  Q
    ||||| ||||||||||||||||||||||||||||||||||| |||| ||| ||||||||||||||||||||||||||||||||       |||  |||||    
T  14044216 cattatttaaaagtgaaaaagtttcaaaataatgacaagggcaacttagt-aaagtatcactctctttctttcatctttacacttttcttaatacgtgtg 14044314  T
Q  110 aaatggtcaaataggtcacttattcagggacggagggagta 150  Q
    ||||| |||||||||||||||||||||||||||||||||||    
T  14044315 aaatgatcaaataggtcacttattcagggacggagggagta 14044355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 10 - 150
Target Start/End: Complemental strand, 36768014 - 36767876
Alignment:
Q  10 cattacttaaaagtgaaaaagtttcaaaataatgacaagggtaactcagtaaaagtatcactctctttctttcatctttacacnnnnnnnaatctgtgtg 109  Q
    ||||| |||||||||||   |||| |||||||| | ||||| || ||||||||| ||||||||||||||||||||||||||||       ||||||||||    
T  36768014 cattatttaaaagtgaag--gtttaaaaataataataagggcaattcagtaaaaatatcactctctttctttcatctttacactctttttaatctgtgtg 36767917  T
Q  110 aaatggtcaaataggtcacttattcagggacggagggagta 150  Q
    || ||||||||||||||||||||||||||| ||| ||||||    
T  36767916 aagtggtcaaataggtcacttattcagggagggacggagta 36767876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 34 - 150
Target Start/End: Original strand, 5712600 - 5712716
Alignment:
Q  34 caaaataatgacaagggtaactcagtaaaagtatcactctctttctttcatctttacacnnnnnnnaatctgtgtgaaatggtcaaataggtcacttatt 133  Q
    ||||||||| | ||||| || |||| |||| ||||||| |||||||||||||||||||        |||||||||| ||||||||| ||||||| |||||    
T  5712600 caaaataataataagggcaattcagaaaaaatatcactttctttctttcatctttacatttttcttaatctgtgtggaatggtcaagtaggtcatttatt 5712699  T
Q  134 cagggacggagggagta 150  Q
    |||||||||||||||||    
T  5712700 cagggacggagggagta 5712716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 10 - 150
Target Start/End: Complemental strand, 2970805 - 2970666
Alignment:
Q  10 cattacttaaaagtgaaaaagtttcaaaataatga-caagggtaactcagtaaaagtatcactctctttctttcatctttacacnnnnnnnaatctgtgt 108  Q
    |||||||||||||||||   ||||||||||||| | |||||| || ||||| ||| ||||| | |||||||||||||||||||        |||||||||    
T  2970805 cattacttaaaagtgaag--gtttcaaaataattaacaagggcaattcagtgaaaatatcattatctttctttcatctttacatttttcttaatctgtgt 2970708  T
Q  109 gaaatggtcaaataggtcacttattcagggacggagggagta 150  Q
    ||||||||||| |||||||  |||| |||||| |||||||||    
T  2970707 gaaatggtcaagtaggtcaaatattgagggacagagggagta 2970666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 30 - 136
Target Start/End: Original strand, 33404409 - 33404515
Alignment:
Q  30 gtttcaaaataatgacaagggtaactcagtaaaagtatcactctctttctttcatctttacacnnnnnnnaatctgtgtgaaatggtcaaataggtcact 129  Q
    |||| |||||||| | ||||| || ||||||||| |||||||||||||||||||||||||||        ||||||||| ||||| |||| |||||||||    
T  33404409 gtttaaaaataataataagggcaattcagtaaaaatatcactctctttctttcatctttacatttttcttaatctgtgtaaaatgatcaagtaggtcact 33404508  T
Q  130 tattcag 136  Q
    |||||||    
T  33404509 tattcag 33404515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 117 - 153
Target Start/End: Complemental strand, 14044089 - 14044053
Alignment:
Q  117 caaataggtcacttattcagggacggagggagtaata 153  Q
    |||||||||||||||||||||||||||||||||||||    
T  14044089 caaataggtcacttattcagggacggagggagtaata 14044053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 117 - 152
Target Start/End: Complemental strand, 36982219 - 36982184
Alignment:
Q  117 caaataggtcacttattcagggacggagggagtaat 152  Q
    ||||||||||||||||||||||||||||||||||||    
T  36982219 caaataggtcacttattcagggacggagggagtaat 36982184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 118 - 150
Target Start/End: Original strand, 36768857 - 36768889
Alignment:
Q  118 aaataggtcacttattcagggacggagggagta 150  Q
    |||||||||||||||||||||||||||||||||    
T  36768857 aaataggtcacttattcagggacggagggagta 36768889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 115 - 150
Target Start/End: Original strand, 5213148 - 5213183
Alignment:
Q  115 gtcaaataggtcacttattcagggacggagggagta 150  Q
    ||||| ||||||||||||||||||||||||||||||    
T  5213148 gtcaactaggtcacttattcagggacggagggagta 5213183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 115 - 150
Target Start/End: Original strand, 37304371 - 37304406
Alignment:
Q  115 gtcaaataggtcacttattcagggacggagggagta 150  Q
    ||||| ||||||||||||||||||||||||||||||    
T  37304371 gtcaactaggtcacttattcagggacggagggagta 37304406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 117 - 151
Target Start/End: Complemental strand, 33403227 - 33403193
Alignment:
Q  117 caaataggtcacttattcagggacggagggagtaa 151  Q
    ||||||| |||||||||||||||||||||||||||    
T  33403227 caaatagatcacttattcagggacggagggagtaa 33403193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 124 - 156
Target Start/End: Complemental strand, 1780974 - 1780942
Alignment:
Q  124 gtcacttattcagggacggagggagtaataaaa 156  Q
    |||||||||| ||||||||||||||||||||||    
T  1780974 gtcacttattaagggacggagggagtaataaaa 1780942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 115; Significance: 2e-58; HSPs: 27)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 10 - 153
Target Start/End: Original strand, 39788153 - 39788296
Alignment:
Q  10 cattacttaaaagtgaaaaagtttcaaaataatgacaagggtaactcagtaaaagtatcactctctttctttcatctttacacnnnnnnnaatctgtgtg 109  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||       ||||||||||    
T  39788153 cattacttaaaagtgaaaaagtttcaaaataatgacaagggcaactcagtaaaagtatcactctctttctttcatctttacacttttcttaatctgtgtg 39788252  T
Q  110 aaatggtcaaataggtcacttattcagggacggagggagtaata 153  Q
    |||||||||||||||||||||||||||||||| |||||||||||    
T  39788253 aaatggtcaaataggtcacttattcagggacgaagggagtaata 39788296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 10 - 152
Target Start/End: Complemental strand, 40071589 - 40071447
Alignment:
Q  10 cattacttaaaagtgaaaaagtttcaaaataatgacaagggtaactcagtaaaagtatcactctctttctttcatctttacacnnnnnnnaatctgtgtg 109  Q
    |||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||       ||||||||||    
T  40071589 cattgcttaaaagtgaaaaagtttcaaaataatgacaagggcaactcagtaaaagtatcactctctttctttcatctttacacttttcttaatctgtgtg 40071490  T
Q  110 aaatggtcaaataggtcacttattcagggacggagggagtaat 152  Q
    |||||||||||||||||||||||| ||||||||||||||||||    
T  40071489 aaatggtcaaataggtcacttattaagggacggagggagtaat 40071447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 11 - 150
Target Start/End: Original strand, 17493914 - 17494053
Alignment:
Q  11 attacttaaaagtgaaaaagtttcaaaataatgacaagggtaactcagtaaaagtatcactctctttctttcatctttacacnnnnnnnaatctgtgtga 110  Q
    |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||       |||||||||||    
T  17493914 attacttaaaagtgaaaaagtttcaaaataatgacaagggcaactcaataaaagtatcactctctttctttcatctttacacttttcttaatctgtgtga 17494013  T
Q  111 aatggtcaaataggtcacttattcagggacggagggagta 150  Q
    ||||||||||||||||||||||| ||||||||||||||||    
T  17494014 aatggtcaaataggtcacttattaagggacggagggagta 17494053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 10 - 152
Target Start/End: Complemental strand, 54438297 - 54438155
Alignment:
Q  10 cattacttaaaagtgaaaaagtttcaaaataatgacaagggtaactcagtaaaagtatcactctctttctttcatctttacacnnnnnnnaatctgtgtg 109  Q
    |||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||       |||| |||||    
T  54438297 cattacttaaaagtgaaaaagttttaaaataatgacaagggcaactcagtaaaagtatcactctctttctttcatctttacacttttcttaatcggtgtg 54438198  T
Q  110 aaatggtcaaataggtcacttattcagggacggagggagtaat 152  Q
    |||||||||||||||||||||||| ||||||||||||||||||    
T  54438197 aaatggtcaaataggtcacttatttagggacggagggagtaat 54438155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 10 - 153
Target Start/End: Complemental strand, 34408797 - 34408654
Alignment:
Q  10 cattacttaaaagtgaaaaagtttcaaaataatgacaagggtaactcagtaaaagtatcactctctttctttcatctttacacnnnnnnnaatctgtgtg 109  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||| ||||||||||||||||||||||       ||| ||||||    
T  34408797 cattacttaaaagtgaaaaagtttcaaaataatgacaagggcaactcaataaaagtatcattctctttctttcatctttacacttttcctaatatgtgtg 34408698  T
Q  110 aaatggtcaaataggtcacttattcagggacggagggagtaata 153  Q
    |||||| |||||||||||||||||||||||||||||||||||||    
T  34408697 aaatggccaaataggtcacttattcagggacggagggagtaata 34408654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 10 - 153
Target Start/End: Complemental strand, 37064893 - 37064750
Alignment:
Q  10 cattacttaaaagtgaaaaagtttcaaaataatgacaagggtaactcagtaaaagtatcactctctttctttcatctttacacnnnnnnnaatctgtgtg 109  Q
    ||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||       ||||| ||||    
T  37064893 cattacttaaaagtgaaaaagtttcaaaaaaatgacaagggcaactcagtaaaagtatcactctctttctttcatctttacacttttcttaatctatgtg 37064794  T
Q  110 aaatggtcaaataggtcacttattcagggacggagggagtaata 153  Q
    ||||| |||||||||||||||||||||||||||| |||||||||    
T  37064793 aaatgatcaaataggtcacttattcagggacggatggagtaata 37064750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 10 - 147
Target Start/End: Complemental strand, 33800923 - 33800786
Alignment:
Q  10 cattacttaaaagtgaaaaagtttcaaaataatgacaagggtaactcagtaaaagtatcactctctttctttcatctttacacnnnnnnnaatctgtgtg 109  Q
    ||||| |||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||| |||||||||||       ||||||||||    
T  33800923 cattatttaaaagtgaaaaagtttcaaaatgatgacaagggcaactcagtaaaagtatcactctctttcttccatctttacacttttctgaatctgtgtg 33800824  T
Q  110 aaatggtcaaataggtcacttattcagggacggaggga 147  Q
    ||||||||||||||||||||||||||||||||||||||    
T  33800823 aaatggtcaaataggtcacttattcagggacggaggga 33800786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 1 - 150
Target Start/End: Complemental strand, 51744668 - 51744519
Alignment:
Q  1 tgtggtcaccattacttaaaagtgaaaaagtttcaaaataatgacaagggtaactcagtaaaagtatcactctctttctttcatctttacacnnnnnnna 100  Q
    ||||||| |||||||||||||||||| ||||||||||||||||||||||| |||| |||||||||||||||||||||||  |||||||||||       |    
T  51744668 tgtggtccccattacttaaaagtgaacaagtttcaaaataatgacaagggcaacttagtaaaagtatcactctctttctcacatctttacacttttctta 51744569  T
Q  101 atctgtgtgaaatggtcaaataggtcacttattcagggacggagggagta 150  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||    
T  51744568 atctgtgtgaaatggtcaaataggtcacttattcagggacggagagagta 51744519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 10 - 153
Target Start/End: Original strand, 47199646 - 47199789
Alignment:
Q  10 cattacttaaaagtgaaaaagtttcaaaataatgacaagggtaactcagtaaaagtatcactctctttctttcatctttacacnnnnnnnaatctgtgtg 109  Q
    |||||||||||||||||||||||| |||||||||||||||| |||||| ||||| ||||||||||||||||||||||||||||       ||||||||||    
T  47199646 cattacttaaaagtgaaaaagttttaaaataatgacaagggcaactcaataaaaatatcactctctttctttcatctttacacttttcttaatctgtgtg 47199745  T
Q  110 aaatggtcaaataggtcacttattcagggacggagggagtaata 153  Q
    |||||||||||||| ||||||||||||| |||||||||||||||    
T  47199746 aaatggtcaaatagatcacttattcaggtacggagggagtaata 47199789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 10 - 150
Target Start/End: Original strand, 20789833 - 20789972
Alignment:
Q  10 cattacttaaaagtgaaaaagtttcaaaataatgacaagggtaactcagtaaaagtatcactctctttctttcatctttacacnnnnnnnaatctgtgtg 109  Q
    ||||||||||||||||||||||||||||||||||||||||  | |||||||||||||||||||||||||||||||||||||||       ||||||||||    
T  20789833 cattacttaaaagtgaaaaagtttcaaaataatgacaaggc-agctcagtaaaagtatcactctctttctttcatctttacacttttcttaatctgtgtg 20789931  T
Q  110 aaatggtcaaataggtcacttattcagggacggagggagta 150  Q
    |||||||||||||| ||||||||||||| ||||||||||||    
T  20789932 aaatggtcaaatagatcacttattcaggaacggagggagta 20789972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 10 - 150
Target Start/End: Complemental strand, 925276 - 925136
Alignment:
Q  10 cattacttaaaagtgaaaaagtttcaaaataatgacaagggtaactcagtaaaagtatcactctctttctttcatctttacacnnnnnnnaatctgtgtg 109  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| | ||||||| ||||||||||       ||||||||||    
T  925276 cattacttaaaagtgaaaaagtttcaaaataatgacaagggcaactcagtaaaagtatcactttatttcttttatctttacacttttcttaatctgtgtg 925177  T
Q  110 aaatggtcaaataggtcacttattcagggacggagggagta 150  Q
    ||||| ||||||| |||||||||| ||||||||||||||||    
T  925176 aaatgatcaaataagtcacttattaagggacggagggagta 925136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 10 - 150
Target Start/End: Complemental strand, 32218077 - 32217937
Alignment:
Q  10 cattacttaaaagtgaaaaagtttcaaaataatgacaagggtaactcagtaaaagtatcactctctttctttcatctttacacnnnnnnnaatctgtgtg 109  Q
    ||||||||||||||||||||||||||||||||||||||||   | ||||||||| ||| | ||||||||||||||||||||||       ||||||||||    
T  32218077 cattacttaaaagtgaaaaagtttcaaaataatgacaaggactattcagtaaaaatataattctctttctttcatctttacactcttcttaatctgtgtg 32217978  T
Q  110 aaatggtcaaataggtcacttattcagggacggagggagta 150  Q
    |||||||||| ||||| |  |||| |||||||| |||||||    
T  32217977 aaatggtcaagtaggtaaagtattgagggacggtgggagta 32217937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 10 - 150
Target Start/End: Original strand, 21240486 - 21240626
Alignment:
Q  10 cattacttaaaagtgaaaaagtttcaaaataatgacaagggtaactcagtaaaagtatcactctctttctttcatctttacacnnnnnnnaatctgtgtg 109  Q
    |||||||||||| |||||||||||||||||| |||||| |  || ||||||||| ||||| |||||||||||||||| |||||       ||||||||||    
T  21240486 cattacttaaaaatgaaaaagtttcaaaatagtgacaatgtcaattcagtaaaaatatcattctctttctttcatctctacacttttcttaatctgtgtg 21240585  T
Q  110 aaatggtcaaataggtcacttattcagggacggagggagta 150  Q
    |||||||||| |||||||  |||  ||||||||||||||||    
T  21240586 aaatggtcaagtaggtcaagtatcgagggacggagggagta 21240626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 34 - 150
Target Start/End: Original strand, 10441517 - 10441631
Alignment:
Q  34 caaaataatgacaagggtaactcagtaaaagtatcactctctttctttcatctttacacnnnnnnnaatctgtgtgaaatggtcaaataggtcacttatt 133  Q
    ||||||||| | ||||| || ||||||||| |||||||||  |||||| ||||||||||       |||||||||||||||||||| |||||||||||||    
T  10441517 caaaataataataagggcaattcagtaaaaatatcactct--ttcttttatctttacacttatcttaatctgtgtgaaatggtcaagtaggtcacttatt 10441614  T
Q  134 cagggacggagggagta 150  Q
    |||||||||||||||||    
T  10441615 cagggacggagggagta 10441631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 8 - 140
Target Start/End: Original strand, 52101206 - 52101338
Alignment:
Q  8 accattacttaaaagtgaaaaagtttcaaaataatgacaagggtaactcagtaaaagtatcactctctttctttcatctttacacnnnnnnnaatctgtg 107  Q
    |||||||||||||||||||||| |||||||||||||||||| | || ||||||||| ||||| | | ||||||||||||||||||       ||||||||    
T  52101206 accattacttaaaagtgaaaaaatttcaaaataatgacaagtgcaattcagtaaaaatatcattatatttctttcatctttacacttttcttaatctgtg 52101305  T
Q  108 tgaaatggtcaaataggtcacttattcagggac 140  Q
    |||||| ||||| | |||||  |||| ||||||    
T  52101306 tgaaatagtcaagttggtcaagtattgagggac 52101338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 10 - 92
Target Start/End: Complemental strand, 53509782 - 53509700
Alignment:
Q  10 cattacttaaaagtgaaaaagtttcaaaataatgacaagggtaactcagtaaaagtatcactctctttctttcatctttacac 92  Q
    ||||| |||||||||||||||||||||||||||||||| |  || ||||||| | ||||| ||| ||||||||||||||||||    
T  53509782 cattatttaaaagtgaaaaagtttcaaaataatgacaatgacaattcagtaacaatatcattctttttctttcatctttacac 53509700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 10 - 88
Target Start/End: Complemental strand, 28910296 - 28910220
Alignment:
Q  10 cattacttaaaagtgaaaaagtttcaaaataatgacaagggtaactcagtaaaagtatcactctctttctttcatcttt 88  Q
    |||||||||||||||||   ||||||||||||| ||||||  || ||||||||| ||||| ||||||||||||||||||    
T  28910296 cattacttaaaagtgaag--gtttcaaaataataacaaggacaattcagtaaaaatatcattctctttctttcatcttt 28910220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 100 - 149
Target Start/End: Complemental strand, 28689715 - 28689666
Alignment:
Q  100 aatctgtgtgaaatggtcaaataggtcacttattcagggacggagggagt 149  Q
    |||||||||||||| ||||||||| |||||||||||||||| ||||||||    
T  28689715 aatctgtgtgaaatagtcaaatagatcacttattcagggacagagggagt 28689666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 117 - 151
Target Start/End: Complemental strand, 17493786 - 17493752
Alignment:
Q  117 caaataggtcacttattcagggacggagggagtaa 151  Q
    |||||||||||||||||||||||||||||||||||    
T  17493786 caaataggtcacttattcagggacggagggagtaa 17493752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 117 - 150
Target Start/End: Complemental strand, 10441176 - 10441143
Alignment:
Q  117 caaataggtcacttattcagggacggagggagta 150  Q
    ||||||||||||||||||||||||||||||||||    
T  10441176 caaataggtcacttattcagggacggagggagta 10441143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 117 - 150
Target Start/End: Original strand, 34408924 - 34408957
Alignment:
Q  117 caaataggtcacttattcagggacggagggagta 150  Q
    ||||||||||||||||||||||||||||||||||    
T  34408924 caaataggtcacttattcagggacggagggagta 34408957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 117 - 150
Target Start/End: Original strand, 40071716 - 40071749
Alignment:
Q  117 caaataggtcacttattcagggacggagggagta 150  Q
    ||||||||||||||||||||||||||||||||||    
T  40071716 caaataggtcacttattcagggacggagggagta 40071749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 85
Target Start/End: Original strand, 46870762 - 46870840
Alignment:
Q  5 gtcaccattacttaaaagtgaaaaagtttcaaaataatgacaagggtaactcagtaaaagtatcactctctttctttcatc 85  Q
    |||| |||||||||||||||||   ||||||||||||| ||||||   | ||||||||| ||||| |||||||||||||||    
T  46870762 gtcatcattacttaaaagtgaag--gtttcaaaataataacaaggactattcagtaaaaatatcattctctttctttcatc 46870840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 117 - 150
Target Start/End: Original strand, 54438424 - 54438457
Alignment:
Q  117 caaataggtcacttattcagggacggagggagta 150  Q
    ||||||||||||||||||||||||||||||||||    
T  54438424 caaataggtcacttattcagggacggagggagta 54438457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 117 - 152
Target Start/End: Original strand, 925403 - 925438
Alignment:
Q  117 caaataggtcacttattcagggacggagggagtaat 152  Q
    |||||||||||||||||||||||||| |||||||||    
T  925403 caaataggtcacttattcagggacggtgggagtaat 925438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 117 - 150
Target Start/End: Original strand, 51744751 - 51744784
Alignment:
Q  117 caaataggtcacttattcagggacggagggagta 150  Q
    ||||||||||||||||| ||||||||||||||||    
T  51744751 caaataggtcacttatttagggacggagggagta 51744784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 114 - 150
Target Start/End: Original strand, 10385073 - 10385109
Alignment:
Q  114 ggtcaaataggtcacttattcagggacggagggagta 150  Q
    |||||| ||||||||||||| ||||||||||||||||    
T  10385073 ggtcaactaggtcacttattaagggacggagggagta 10385109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 112; Significance: 1e-56; HSPs: 21)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 10 - 150
Target Start/End: Original strand, 40496933 - 40497073
Alignment:
Q  10 cattacttaaaagtgaaaaagtttcaaaataatgacaagggtaactcagtaaaagtatcactctctttctttcatctttacacnnnnnnnaatctgtgtg 109  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||       ||||||||||    
T  40496933 cattacttaaaagtgaaaaagtttcaaaataatgacaagggcaactcagtaaaagtatcactctctttctttcatctttacacttttcttaatctgtgtg 40497032  T
Q  110 aaatggtcaaataggtcacttattcagggacggagggagta 150  Q
    |||||||||||||||||||||||| ||||||||||||||||    
T  40497033 aaatggtcaaataggtcacttattaagggacggagggagta 40497073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 10 - 152
Target Start/End: Original strand, 51545822 - 51545964
Alignment:
Q  10 cattacttaaaagtgaaaaagtttcaaaataatgacaagggtaactcagtaaaagtatcactctctttctttcatctttacacnnnnnnnaatctgtgtg 109  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||       ||||||||||    
T  51545822 cattacttaaaagtgaaaaagtttcaaaataatgacaagggcaactcagtaaaagtatcactctctttctttcatctttacacttttcttaatctgtgtg 51545921  T
Q  110 aaatggtcaaataggtcacttattcagggacggagggagtaat 152  Q
    ||||| ||||||||||||||||||||||||||||| |||||||    
T  51545922 aaatgatcaaataggtcacttattcagggacggagagagtaat 51545964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 10 - 150
Target Start/End: Original strand, 48169884 - 48170024
Alignment:
Q  10 cattacttaaaagtgaaaaagtttcaaaataatgacaagggtaactcagtaaaagtatcactctctttctttcatctttacacnnnnnnnaatctgtgtg 109  Q
    ||||||||||||||||||||||||||||||||||||||||| | |||||||| ||||||||||||||||||| ||||||||||       ||||||||||    
T  48169884 cattacttaaaagtgaaaaagtttcaaaataatgacaagggcagctcagtaatagtatcactctctttcttttatctttacacttttcttaatctgtgtg 48169983  T
Q  110 aaatggtcaaataggtcacttattcagggacggagggagta 150  Q
    |||||||||||||||||||||||| ||||||||||||||||    
T  48169984 aaatggtcaaataggtcacttattaagggacggagggagta 48170024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 10 - 150
Target Start/End: Complemental strand, 13542932 - 13542792
Alignment:
Q  10 cattacttaaaagtgaaaaagtttcaaaataatgacaagggtaactcagtaaaagtatcactctctttctttcatctttacacnnnnnnnaatctgtgtg 109  Q
    |||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||       ||||| | ||    
T  13542932 cattacttaaaagtgaaaaagttttaaaataatgacaagggcaactcagtaaaagtatcaatctctttctttcatctttacacttttcttaatctatatg 13542833  T
Q  110 aaatggtcaaataggtcacttattcagggacggagggagta 150  Q
    |||||||||||||||||||||||||||||||||| ||||||    
T  13542832 aaatggtcaaataggtcacttattcagggacggatggagta 13542792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 10 - 150
Target Start/End: Original strand, 41346207 - 41346347
Alignment:
Q  10 cattacttaaaagtgaaaaagtttcaaaataatgacaagggtaactcagtaaaagtatcactctctttctttcatctttacacnnnnnnnaatctgtgtg 109  Q
    |||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||  |||||||||||||||||||       ||||||||||    
T  41346207 cattacttaaaagtgaaaaagttttaaaataatgacaagggcaactcagtaaaagtatcacttactttctttcatctttacacttttcttaatctgtgtg 41346306  T
Q  110 aaatggtcaaataggtcacttattcagggacggagggagta 150  Q
    |||| |||||||| |||||||||||||||||||||||||||    
T  41346307 aaatagtcaaatatgtcacttattcagggacggagggagta 41346347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 11 - 150
Target Start/End: Original strand, 54014398 - 54014537
Alignment:
Q  11 attacttaaaagtgaaaaagtttcaaaataatgacaagggtaactcagtaaaagtatcactctctttctttcatctttacacnnnnnnnaatctgtgtga 110  Q
    |||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||| ||||||||||       |||||||||||    
T  54014398 attacttaaaagtgaaaaagtttcaaaataatgataagggcaactcagtaaaagtatcactctctttcttttatctttacacttttcttaatctgtgtga 54014497  T
Q  111 aatggtcaaataggtcacttattcagggacggagggagta 150  Q
    ||||||||||||||| ||||||| |||||| |||||||||    
T  54014498 aatggtcaaataggttacttattaagggacagagggagta 54014537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 10 - 150
Target Start/End: Original strand, 50676634 - 50676773
Alignment:
Q  10 cattacttaaaagtgaaaaagtttcaaaataatgacaagggtaactcagtaaaagtatcactctctttctttcatctttacacnnnnnnnaatctgtgtg 109  Q
    |||||||||||||||||||||||| |||||||||||||||  |||||||||||| ||||||||||||||||| ||||||||||       ||||||||||    
T  50676634 cattacttaaaagtgaaaaagttttaaaataatgacaaggc-aactcagtaaaaatatcactctctttcttttatctttacacttttcttaatctgtgtg 50676732  T
Q  110 aaatggtcaaataggtcacttattcagggacggagggagta 150  Q
    |||||||||||||||||||||||| ||||||||||||||||    
T  50676733 aaatggtcaaataggtcacttattaagggacggagggagta 50676773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 10 - 123
Target Start/End: Original strand, 24709170 - 24709283
Alignment:
Q  10 cattacttaaaagtgaaaaagtttcaaaataatgacaagggtaactcagtaaaagtatcactctctttctttcatctttacacnnnnnnnaatctgtgtg 109  Q
    |||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||       ||||||||||    
T  24709170 cattacttaaaagtgaaaaaatttcaaaataatgacaagggcaactcagtaaaagtatcactctctttctttcatctttacacttttcttaatctgtgtg 24709269  T
Q  110 aaatggtcaaatag 123  Q
    ||||||||||||||    
T  24709270 aaatggtcaaatag 24709283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 10 - 148
Target Start/End: Original strand, 48737686 - 48737824
Alignment:
Q  10 cattacttaaaagtgaaaaagtttcaaaataatgacaagggtaactcagtaaaagtatcactctctttctttcatctttacacnnnnnnnaatctgtgtg 109  Q
    ||||||||||||||||||||||||||||||||||||||||| || ||||||||| ||||| | |||||||||||||| |||||       ||||||||||    
T  48737686 cattacttaaaagtgaaaaagtttcaaaataatgacaagggcaattcagtaaaaatatcattttctttctttcatctctacacttttcttaatctgtgtg 48737785  T
Q  110 aaatggtcaaataggtcacttattcagggacggagggag 148  Q
    |||| ||||| |||||||  |||| | ||||||||||||    
T  48737786 aaattgtcaagtaggtcaagtattgaaggacggagggag 48737824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 30 - 150
Target Start/End: Original strand, 30462848 - 30462967
Alignment:
Q  30 gtttcaaaataatgacaagggtaactcagtaaaagtatcactctctttctttcatctttacacnnnnnnnaatctgtgtgaaatggtcaaataggtcact 129  Q
    |||| |||||||| | ||||| || ||||||||| ||||||||| ||||||||||||||| ||       |||||||||||||||||||| ||| |||||    
T  30462848 gtttaaaaataataataagggcaattcagtaaaaatatcactctatttctttcatctttatacttttcttaatctgtgtgaaatggtcaagtagatcact 30462947  T
Q  130 tattcagggacggagggagta 150  Q
    ||||| |||||||| ||||||    
T  30462948 tattc-gggacggatggagta 30462967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 117 - 153
Target Start/End: Complemental strand, 54014270 - 54014234
Alignment:
Q  117 caaataggtcacttattcagggacggagggagtaata 153  Q
    |||||||||||||||||||||||||||||||||||||    
T  54014270 caaataggtcacttattcagggacggagggagtaata 54014234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 117 - 150
Target Start/End: Complemental strand, 30459839 - 30459806
Alignment:
Q  117 caaataggtcacttattcagggacggagggagta 150  Q
    ||||||||||||||||||||||||||||||||||    
T  30459839 caaataggtcacttattcagggacggagggagta 30459806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 117 - 150
Target Start/End: Complemental strand, 41346080 - 41346047
Alignment:
Q  117 caaataggtcacttattcagggacggagggagta 150  Q
    ||||||||||||||||||||||||||||||||||    
T  41346080 caaataggtcacttattcagggacggagggagta 41346047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 117 - 150
Target Start/End: Complemental strand, 50676508 - 50676475
Alignment:
Q  117 caaataggtcacttattcagggacggagggagta 150  Q
    ||||||||||||||||||||||||||||||||||    
T  50676508 caaataggtcacttattcagggacggagggagta 50676475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 117 - 152
Target Start/End: Original strand, 12568275 - 12568310
Alignment:
Q  117 caaataggtcacttattcagggacggagggagtaat 152  Q
    |||||| |||||||||||||||||||||||||||||    
T  12568275 caaatatgtcacttattcagggacggagggagtaat 12568310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 117 - 152
Target Start/End: Original strand, 13544739 - 13544774
Alignment:
Q  117 caaataggtcacttattcagggacggagggagtaat 152  Q
    |||||| |||||||||||||||||||||||||||||    
T  13544739 caaatatgtcacttattcagggacggagggagtaat 13544774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 115 - 150
Target Start/End: Complemental strand, 34827357 - 34827322
Alignment:
Q  115 gtcaaataggtcacttattcagggacggagggagta 150  Q
    ||||| ||||||||||||||||||||||||||||||    
T  34827357 gtcaactaggtcacttattcagggacggagggagta 34827322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 115 - 150
Target Start/End: Complemental strand, 38492087 - 38492052
Alignment:
Q  115 gtcaaataggtcacttattcagggacggagggagta 150  Q
    ||||| ||||||||||||||||||||||||||||||    
T  38492087 gtcaactaggtcacttattcagggacggagggagta 38492052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 117 - 152
Target Start/End: Complemental strand, 51545695 - 51545660
Alignment:
Q  117 caaataggtcacttattcagggacggagggagtaat 152  Q
    ||||||||||||||||||||| ||||||||||||||    
T  51545695 caaataggtcacttattcaggaacggagggagtaat 51545660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 117 - 150
Target Start/End: Complemental strand, 40496806 - 40496773
Alignment:
Q  117 caaataggtcacttattcagggacggagggagta 150  Q
    ||||||||||||||||||| ||||||||||||||    
T  40496806 caaataggtcacttattcaaggacggagggagta 40496773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 117 - 150
Target Start/End: Complemental strand, 48169757 - 48169724
Alignment:
Q  117 caaataggtcacttattcagggacggagggagta 150  Q
    |||||||||||||||||||| |||||||||||||    
T  48169757 caaataggtcacttattcagagacggagggagta 48169724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 112; Significance: 1e-56; HSPs: 23)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 10 - 150
Target Start/End: Original strand, 29194148 - 29194288
Alignment:
Q  10 cattacttaaaagtgaaaaagtttcaaaataatgacaagggtaactcagtaaaagtatcactctctttctttcatctttacacnnnnnnnaatctgtgtg 109  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||       ||| ||||||    
T  29194148 cattacttaaaagtgaaaaagtttcaaaataatgacaagggcaactcagtaaaagtatcactctctttctttcatctttacacttttcttaatttgtgtg 29194247  T
Q  110 aaatggtcaaataggtcacttattcagggacggagggagta 150  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  29194248 aaatggtcaaataggtcacttattcagggacggagggagta 29194288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 10 - 151
Target Start/End: Original strand, 2110380 - 2110521
Alignment:
Q  10 cattacttaaaagtgaaaaagtttcaaaataatgacaagggtaactcagtaaaagtatcactctctttctttcatctttacacnnnnnnnaatctgtgtg 109  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||       ||||||||||    
T  2110380 cattacttaaaagtgaaaaagtttcaaaataatgacaagggcaactcagtaaaagtatcactctctttctttcatctttacacttttcttaatctgtgtg 2110479  T
Q  110 aaatggtcaaataggtcacttattcagggacggagggagtaa 151  Q
    ||||| ||||||| |||||||||||||||||||| |||||||    
T  2110480 aaatgatcaaatatgtcacttattcagggacggaaggagtaa 2110521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 10 - 155
Target Start/End: Original strand, 43370834 - 43370979
Alignment:
Q  10 cattacttaaaagtgaaaaagtttcaaaataatgacaagggtaactcagtaaaagtatcactctctttctttcatctttacacnnnnnnnaatctgtgtg 109  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| || |||||||       ||||||||||    
T  43370834 cattacttaaaagtgaaaaagtttcaaaataatgacaagggcaactcagtaaaagtatcactctctttcttttatttttacacttttcttaatctgtgtg 43370933  T
Q  110 aaatggtcaaataggtcacttattcagggacggagggagtaataaa 155  Q
    |||||||||||||||||||||||| |||||||||||||||| ||||    
T  43370934 aaatggtcaaataggtcacttattaagggacggagggagtattaaa 43370979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 10 - 150
Target Start/End: Complemental strand, 28585823 - 28585683
Alignment:
Q  10 cattacttaaaagtgaaaaagtttcaaaataatgacaagggtaactcagtaaaagtatcactctctttctttcatctttacacnnnnnnnaatctgtgtg 109  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||       ||||||||||    
T  28585823 cattacttaaaagtgaaaaagtttcaaaataatgacaagggcaactcagtaaaagtatcactctctttcttttatctttacacttttcttaatctgtgtg 28585724  T
Q  110 aaatggtcaaataggtcacttattcagggacggagggagta 150  Q
    |||||||||||||||||||||||| ||||||||| ||||||    
T  28585723 aaatggtcaaataggtcacttattaagggacggatggagta 28585683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 10 - 150
Target Start/End: Complemental strand, 8381456 - 8381316
Alignment:
Q  10 cattacttaaaagtgaaaaagtttcaaaataatgacaagggtaactcagtaaaagtatcactctctttctttcatctttacacnnnnnnnaatctgtgtg 109  Q
    |||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||        ||||||||||    
T  8381456 cattacttaaaaatgaaaaagtttcaaaataatgacaagggcaactcagtaaaagtatcactctatttctttcatctttacatttttcttaatctgtgtg 8381357  T
Q  110 aaatggtcaaataggtcacttattcagggacggagggagta 150  Q
    |||||||||||||| ||||||||||||||||||||||||||    
T  8381356 aaatggtcaaatagatcacttattcagggacggagggagta 8381316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 10 - 150
Target Start/End: Complemental strand, 45080558 - 45080420
Alignment:
Q  10 cattacttaaaagtgaaaaagtttcaaaataatgacaagggtaactcagtaaaagtatcactctctttctttcatctttacacnnnnnnnaatctgtgtg 109  Q
    ||||||||||||||||||||||||||| ||||||| ||||| ||||||||||||||||||  |||||||||||||||||||||       ||||||||||    
T  45080558 cattacttaaaagtgaaaaagtttcaacataatgataagggcaactcagtaaaagtatca--ctctttctttcatctttacacttttcttaatctgtgtg 45080461  T
Q  110 aaatggtcaaataggtcacttattcagggacggagggagta 150  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  45080460 aaatggtcaaataggtcacttattcagggacggagggagta 45080420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 10 - 145
Target Start/End: Complemental strand, 4828229 - 4828094
Alignment:
Q  10 cattacttaaaagtgaaaaagtttcaaaataatgacaagggtaactcagtaaaagtatcactctctttctttcatctttacacnnnnnnnaatctgtgtg 109  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||| ||||||||||       ||||||||||    
T  4828229 cattacttaaaagtgaaaaagtttcaaaataatgacaagggcaactcagtaaaagtatcactctttttcttttatctttacacttttcttaatctgtgtg 4828130  T
Q  110 aaatggtcaaataggtcacttattcagggacggagg 145  Q
    |||||||||||||||||||||||| ||| |||||||    
T  4828129 aaatggtcaaataggtcacttattaaggaacggagg 4828094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 46 - 150
Target Start/End: Original strand, 30422588 - 30422692
Alignment:
Q  46 aagggtaactcagtaaaagtatcactctctttctttcatctttacacnnnnnnnaatctgtgtgaaatggtcaaataggtcacttattcagggacggagg 145  Q
    ||||| |||||||||||||||||||||||||||||||||| ||||||       ||||||||||||||||||||||||||||||||||||| ||||||||    
T  30422588 aagggcaactcagtaaaagtatcactctctttctttcatcgttacacttttcttaatctgtgtgaaatggtcaaataggtcacttattcagcgacggagg 30422687  T
Q  146 gagta 150  Q
    |||||    
T  30422688 gagta 30422692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 30 - 155
Target Start/End: Complemental strand, 31921741 - 31921616
Alignment:
Q  30 gtttcaaaataatgacaagggtaactcagtaaaagtatcactctctttctttcatctttacacnnnnnnnaatctgtgtgaaatggtcaaataggtcact 129  Q
    |||| |||||||| | ||||| || | ||||||| ||||||||||||||||||||||||||||       |||||||||||||||||||||||| |||||    
T  31921741 gtttaaaaataataataagggcaatttagtaaaaatatcactctctttctttcatctttacacttttcttaatctgtgtgaaatggtcaaatagatcact 31921642  T
Q  130 tattcagggacggagggagtaataaa 155  Q
    ||||||||||||||||||||| ||||    
T  31921641 tattcagggacggagggagtagtaaa 31921616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 10 - 149
Target Start/End: Complemental strand, 1779212 - 1779073
Alignment:
Q  10 cattacttaaaagtgaaaaagtttcaaaataatgacaagggtaactcagtaaaagtatcactctctttctttcatctttacacnnnnnnnaatctgtgtg 109  Q
    |||||||||||||||||||||||||||||||||||||| |  || ||||||||| ||||| | ||||||||||||||||||||       ||||| ||||    
T  1779212 cattacttaaaagtgaaaaagtttcaaaataatgacaaagacaattcagtaaaaatatcattatctttctttcatctttacacttttcttaatctatgtg 1779113  T
Q  110 aaatggtcaaataggtcacttattcagggacggagggagt 149  Q
    |||||||||| || ||||  |||| ||||||||| |||||    
T  1779112 aaatggtcaagtaagtcaagtattgagggacggaaggagt 1779073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 10 - 126
Target Start/End: Original strand, 9370534 - 9370650
Alignment:
Q  10 cattacttaaaagtgaaaaagtttcaaaataatgacaagggtaactcagtaaaagtatcactctctttctttcatctttacacnnnnnnnaatctgtgtg 109  Q
    ||||||||||||||||||||||||||||||||||||||||  || |||||||||  |||| | ||||| ||||||||||||||       ||||||||||    
T  9370534 cattacttaaaagtgaaaaagtttcaaaataatgacaaggacaattcagtaaaaaaatcattttctttttttcatctttacacttttcttaatctgtgtg 9370633  T
Q  110 aaatggtcaaataggtc 126  Q
    |||||||||| ||||||    
T  9370634 aaatggtcaagtaggtc 9370650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 35 - 154
Target Start/End: Original strand, 25898766 - 25898884
Alignment:
Q  35 aaaataatgacaagggtaactcagtaaaagtatcactctctttctttcatctttacacnnnnnnnaatctgtgtgaaatggtcaaataggtcacttattc 134  Q
    |||||||| | ||||| || ||||||||| ||||||| | ||||||||||||||||||       |||||||||||||||||||| || |||||||||||    
T  25898766 aaaataataataagggcaattcagtaaaaatatcactttttttctttcatctttacactcttcttaatctgtgtgaaatggtcaagta-gtcacttattc 25898864  T
Q  135 agggacggagggagtaataa 154  Q
    ||| ||||||||||||||||    
T  25898865 aggaacggagggagtaataa 25898884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 10 - 150
Target Start/End: Complemental strand, 43377346 - 43377208
Alignment:
Q  10 cattacttaaaagtgaaaaagtttcaaaataatgacaagggtaactcagtaaaagtatcactctctttctttcatctttacacnnnnnnnaatctgtgtg 109  Q
    |||||||||||||||||   ||||||||||||| |||||   || ||||||||||||||| | ||||||||||||||||||||       ||| ||| ||    
T  43377346 cattacttaaaagtgaag--gtttcaaaataataacaagtacaattcagtaaaagtatcattttctttctttcatctttacacttttcttaatttgtttg 43377249  T
Q  110 aaatggtcaaataggtcacttattcagggacggagggagta 150  Q
    ||||||| |  |||||||  |||| | ||||||||||||||    
T  43377248 aaatggttatgtaggtcaagtattgaaggacggagggagta 43377208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 30 - 91
Target Start/End: Complemental strand, 39646426 - 39646365
Alignment:
Q  30 gtttcaaaataatgacaagggtaactcagtaaaagtatcactctctttctttcatctttaca 91  Q
    ||||||||||||| ||||||| || ||||||||| ||||| |||||||||||||| ||||||    
T  39646426 gtttcaaaataataacaagggcaattcagtaaaaatatcattctctttctttcatttttaca 39646365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 117 - 154
Target Start/End: Complemental strand, 43370707 - 43370670
Alignment:
Q  117 caaataggtcacttattcagggacggagggagtaataa 154  Q
    ||||||||||||||||||||||||||||||||||||||    
T  43370707 caaataggtcacttattcagggacggagggagtaataa 43370670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 117 - 151
Target Start/End: Complemental strand, 2110253 - 2110219
Alignment:
Q  117 caaataggtcacttattcagggacggagggagtaa 151  Q
    |||||||||||||||||||||||||||||||||||    
T  2110253 caaataggtcacttattcagggacggagggagtaa 2110219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 117 - 151
Target Start/End: Complemental strand, 25898496 - 25898462
Alignment:
Q  117 caaataggtcacttattcagggacggagggagtaa 151  Q
    |||||||||||||||||||||||||||||||||||    
T  25898496 caaataggtcacttattcagggacggagggagtaa 25898462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 10 - 127
Target Start/End: Original strand, 16970316 - 16970431
Alignment:
Q  10 cattacttaaaagtgaaaaagtttcaaaataatgacaagggtaactcagtaaaagtatcactctctttctttcatctttacacnnnnnnnaatctgtgtg 109  Q
    |||||||||||||||  || |||| |||||||| | ||||| || ||||||||| ||||| | ||||||||| ||||||||||       ||| ||||||    
T  16970316 cattacttaaaagtg--aaggtttaaaaataataataagggcaattcagtaaaaatatcattatctttcttttatctttacacttttcttaatatgtgtg 16970413  T
Q  110 aaatggtcaaataggtca 127  Q
    |||||| ||| |||||||    
T  16970414 aaatggccaagtaggtca 16970431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 117 - 150
Target Start/End: Complemental strand, 29194021 - 29193988
Alignment:
Q  117 caaataggtcacttattcagggacggagggagta 150  Q
    ||||||||||||||||||||||||||||||||||    
T  29194021 caaataggtcacttattcagggacggagggagta 29193988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 117 - 150
Target Start/End: Original strand, 45080685 - 45080718
Alignment:
Q  117 caaataggtcacttattcagggacggagggagta 150  Q
    ||||||||||||||||||||||||||||||||||    
T  45080685 caaataggtcacttattcagggacggagggagta 45080718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 115 - 150
Target Start/End: Original strand, 7443117 - 7443152
Alignment:
Q  115 gtcaaataggtcacttattcagggacggagggagta 150  Q
    ||||| ||||||||||||||||||||||||||||||    
T  7443117 gtcaactaggtcacttattcagggacggagggagta 7443152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 117 - 148
Target Start/End: Original strand, 28585950 - 28585981
Alignment:
Q  117 caaataggtcacttattcagggacggagggag 148  Q
    ||||||||||||||||||||||||||||||||    
T  28585950 caaataggtcacttattcagggacggagggag 28585981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 116 - 156
Target Start/End: Complemental strand, 20917763 - 20917723
Alignment:
Q  116 tcaaataggtcacttattcagggacggagggagtaataaaa 156  Q
    |||| ||||||| ||||| ||||||||||||||||||||||    
T  20917763 tcaactaggtcatttattaagggacggagggagtaataaaa 20917723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 108; Significance: 2e-54; HSPs: 17)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 10 - 150
Target Start/End: Original strand, 18575188 - 18575328
Alignment:
Q  10 cattacttaaaagtgaaaaagtttcaaaataatgacaagggtaactcagtaaaagtatcactctctttctttcatctttacacnnnnnnnaatctgtgtg 109  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||       ||| ||||||    
T  18575188 cattacttaaaagtgaaaaagtttcaaaataatgacaagggcaactcagtaaaagtatcactctctttctttcatctttacacttttcttaatttgtgtg 18575287  T
Q  110 aaatggtcaaataggtcacttattcagggacggagggagta 150  Q
    ||||| |||||||||||||||||||||||||||||||||||    
T  18575288 aaatgatcaaataggtcacttattcagggacggagggagta 18575328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 10 - 153
Target Start/End: Original strand, 11254660 - 11254803
Alignment:
Q  10 cattacttaaaagtgaaaaagtttcaaaataatgacaagggtaactcagtaaaagtatcactctctttctttcatctttacacnnnnnnnaatctgtgtg 109  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||       ||| | ||||    
T  11254660 cattacttaaaagtgaaaaagtttcaaaataatgacaagggcaactcagtaaaagtatcactctctttctttcatctttacacttttcttaatttatgtg 11254759  T
Q  110 aaatggtcaaataggtcacttattcagggacggagggagtaata 153  Q
     |||||||||||||||||||||||||||||||||||||||||||    
T  11254760 gaatggtcaaataggtcacttattcagggacggagggagtaata 11254803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 10 - 150
Target Start/End: Original strand, 17493686 - 17493826
Alignment:
Q  10 cattacttaaaagtgaaaaagtttcaaaataatgacaagggtaactcagtaaaagtatcactctctttctttcatctttacacnnnnnnnaatctgtgtg 109  Q
    |||||||||||| |||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||       ||||||||||    
T  17493686 cattacttaaaaatgaaaaagtttcaaaataatgacaagggcaacttagtaaaagtatcactctctttctttcatctttacacttttcttaatctgtgtg 17493785  T
Q  110 aaatggtcaaataggtcacttattcagggacggagggagta 150  Q
    ||||| |||||||||||||||||||||||||||||||||||    
T  17493786 aaatgatcaaataggtcacttattcagggacggagggagta 17493826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 10 - 150
Target Start/End: Original strand, 27820933 - 27821073
Alignment:
Q  10 cattacttaaaagtgaaaaagtttcaaaataatgacaagggtaactcagtaaaagtatcactctctttctttcatctttacacnnnnnnnaatctgtgtg 109  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||       ||||||||||    
T  27820933 cattacttaaaagtgaaaaagtttcaaaataatgacaagggcaactcagtaaaagtatcactctctttcttttatctttacacttttcttaatctgtgtg 27821032  T
Q  110 aaatggtcaaataggtcacttattcagggacggagggagta 150  Q
    |||||||||||||||||||||||| | ||||| ||||||||    
T  27821033 aaatggtcaaataggtcacttattaaaggacgaagggagta 27821073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 10 - 147
Target Start/End: Complemental strand, 38070035 - 38069898
Alignment:
Q  10 cattacttaaaagtgaaaaagtttcaaaataatgacaagggtaactcagtaaaagtatcactctctttctttcatctttacacnnnnnnnaatctgtgtg 109  Q
    |||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||       ||||||||||    
T  38070035 cattacttaaaaatgaaaaagtttcaaaataatgacaagggcaactcagtaaaagtatcactatctttctttcatctttacacttttcttaatctgtgtg 38069936  T
Q  110 aaatggtcaaataggtcacttattcagggacggaggga 147  Q
    ||||||||||||||||||||| |||| |||||||||||    
T  38069935 aaatggtcaaataggtcacttgttcaaggacggaggga 38069898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 10 - 151
Target Start/End: Original strand, 39907068 - 39907209
Alignment:
Q  10 cattacttaaaagtgaaaaagtttcaaaataatgacaagggtaactcagtaaaagtatcactctctttctttcatctttacacnnnnnnnaatctgtgtg 109  Q
    |||||||||||||||||||| |||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||       |||||||||     
T  39907068 cattacttaaaagtgaaaaaatttcaaaataatgataagggcaactcagtaaaagtatcactctctttctttcatctttacacttttcttaatctgtgta 39907167  T
Q  110 aaatggtcaaataggtcacttattcagggacggagggagtaa 151  Q
    ||||||||||||| |||||||||| |||||||||||||||||    
T  39907168 aaatggtcaaataagtcacttattaagggacggagggagtaa 39907209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 10 - 150
Target Start/End: Complemental strand, 12738506 - 12738366
Alignment:
Q  10 cattacttaaaagtgaaaaagtttcaaaataatgacaagggtaactcagtaaaagtatcactctctttctttcatctttacacnnnnnnnaatctgtgtg 109  Q
    ||||||||||||||||||||||||||||||||||||||||| || ||||||||| ||||| | ||||||||| ||||||||||       ||||||||||    
T  12738506 cattacttaaaagtgaaaaagtttcaaaataatgacaagggcaattcagtaaaaatatcattatctttcttttatctttacacttttcttaatctgtgtg 12738407  T
Q  110 aaatggtcaaataggtcacttattcagggacggagggagta 150  Q
    ||||||||||||||||||  |||| |||||||||| |||||    
T  12738406 aaatggtcaaataggtcaagtattgagggacggagagagta 12738366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 30 - 150
Target Start/End: Original strand, 11147829 - 11147949
Alignment:
Q  30 gtttcaaaataatgacaagggtaactcagtaaaagtatcactctctttctttcatctttacacnnnnnnnaatctgtgtgaaatggtcaaataggtcact 129  Q
    |||| |||||||| | ||||| || ||||||||| ||||| |||||| |||||||||||||||       ||||||||||||||| |||| |||||||||    
T  11147829 gtttaaaaataataataagggcaattcagtaaaaatatcattctcttcctttcatctttacacttttcttaatctgtgtgaaatgatcaagtaggtcact 11147928  T
Q  130 tattcagggacggagggagta 150  Q
    |||||||||||||||||||||    
T  11147929 tattcagggacggagggagta 11147949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 10 - 91
Target Start/End: Complemental strand, 17336110 - 17336029
Alignment:
Q  10 cattacttaaaagtgaaaaagtttcaaaataatgacaagggtaactcagtaaaagtatcactctctttctttcatctttaca 91  Q
    ||||||||||||||||||||||||||||||||||||||||  |  ||||||||| ||||| |||||||||||||||||||||    
T  17336110 cattacttaaaagtgaaaaagtttcaaaataatgacaaggacagttcagtaaaaatatcattctctttctttcatctttaca 17336029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 10 - 151
Target Start/End: Original strand, 9753930 - 9754070
Alignment:
Q  10 cattacttaaaagtgaaaaagtttcaaaataatga-caagggtaactcagtaaaagtatcactctctttctttcatctttacacnnnnnnnaatctgtgt 108  Q
    |||||||||||||||||   ||||||||||||| | |||||  || ||||||||| ||||| | ||||||||||||||||||||       |||||||||    
T  9753930 cattacttaaaagtgaag--gtttcaaaataattaacaaggacaattcagtaaaaatatcattatctttctttcatctttacacttttcttaatctgtgt 9754027  T
Q  109 gaaatggtcaaataggtcacttattcagggacggagggagtaa 151  Q
    ||||||||||| |||||||  |||| |||||||||||||||||    
T  9754028 gaaatggtcaagtaggtcaagtattgagggacggagggagtaa 9754070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 117 - 151
Target Start/End: Complemental strand, 18575061 - 18575027
Alignment:
Q  117 caaataggtcacttattcagggacggagggagtaa 151  Q
    |||||||||||||||||||||||||||||||||||    
T  18575061 caaataggtcacttattcagggacggagggagtaa 18575027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 117 - 150
Target Start/End: Complemental strand, 11254533 - 11254500
Alignment:
Q  117 caaataggtcacttattcagggacggagggagta 150  Q
    ||||||||||||||||||||||||||||||||||    
T  11254533 caaataggtcacttattcagggacggagggagta 11254500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 117 - 151
Target Start/End: Original strand, 38070162 - 38070196
Alignment:
Q  117 caaataggtcacttattcagggacggagggagtaa 151  Q
    |||||||||||||||||||||||| ||||||||||    
T  38070162 caaataggtcacttattcagggacagagggagtaa 38070196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 10 - 122
Target Start/End: Complemental strand, 13243686 - 13243575
Alignment:
Q  10 cattacttaaaagtgaaaaagtttcaaaataatga-caagggtaactcagtaaaagtatcactctctttctttcatctttacacnnnnnnnaatctgtgt 108  Q
    |||||||||||| ||||   ||||||||||||| | |||||  || ||||||||| ||||| | ||||||||| ||||||||||       |||| ||||    
T  13243686 cattacttaaaaatgaag--gtttcaaaataattaacaaggacaattcagtaaaaatatcattatctttcttttatctttacacttttcttaatcggtgt 13243589  T
Q  109 gaaatggtcaaata 122  Q
    ||||||||||||||    
T  13243588 gaaatggtcaaata 13243575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 117 - 150
Target Start/End: Complemental strand, 17493559 - 17493526
Alignment:
Q  117 caaataggtcacttattcagggacggagggagta 150  Q
    ||||||||||||||||||||||||||||| ||||    
T  17493559 caaataggtcacttattcagggacggaggaagta 17493526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 117 - 150
Target Start/End: Complemental strand, 27820806 - 27820773
Alignment:
Q  117 caaataggtcacttattcagggacggagggagta 150  Q
    |||||||||||||||||||||||| |||||||||    
T  27820806 caaataggtcacttattcagggacagagggagta 27820773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 115 - 151
Target Start/End: Original strand, 1580991 - 1581027
Alignment:
Q  115 gtcaaataggtcacttattcagggacggagggagtaa 151  Q
    ||||| ||||||| |||||||||||||||||||||||    
T  1580991 gtcaactaggtcatttattcagggacggagggagtaa 1581027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 108; Significance: 2e-54; HSPs: 20)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 10 - 150
Target Start/End: Original strand, 50777157 - 50777297
Alignment:
Q  10 cattacttaaaagtgaaaaagtttcaaaataatgacaagggtaactcagtaaaagtatcactctctttctttcatctttacacnnnnnnnaatctgtgtg 109  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||       ||||||||||    
T  50777157 cattacttaaaagtgaaaaagtttcaaaataatgacaagggcaactcagtaaaagtatcactctctttcttttatctttacacttttcttaatctgtgtg 50777256  T
Q  110 aaatggtcaaataggtcacttattcagggacggagggagta 150  Q
    |||||||||||||||||||||||| ||||||||||||||||    
T  50777257 aaatggtcaaataggtcacttattaagggacggagggagta 50777297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 10 - 153
Target Start/End: Complemental strand, 1929357 - 1929214
Alignment:
Q  10 cattacttaaaagtgaaaaagtttcaaaataatgacaagggtaactcagtaaaagtatcactctctttctttcatctttacacnnnnnnnaatctgtgtg 109  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||       ||||||||||    
T  1929357 cattacttaaaagtgaaaaagtttcaaaataatgacaagggcaactcagtaaaagtatcactctttttctttcatctttacacttttcttaatctgtgtg 1929258  T
Q  110 aaatggtcaaataggtcacttattcagggacggagggagtaata 153  Q
    ||||| ||||||| ||||||||||||||||||||||||||||||    
T  1929257 aaatgatcaaatatgtcacttattcagggacggagggagtaata 1929214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 10 - 150
Target Start/End: Original strand, 46862716 - 46862856
Alignment:
Q  10 cattacttaaaagtgaaaaagtttcaaaataatgacaagggtaactcagtaaaagtatcactctctttctttcatctttacacnnnnnnnaatctgtgtg 109  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||| ||||||||||       ||||||||||    
T  46862716 cattacttaaaagtgaaaaagtttcaaaataatgacaagggcaactcaggaaaagtatcactctctttcttttatctttacacttttcttaatctgtgtg 46862815  T
Q  110 aaatggtcaaataggtcacttattcagggacggagggagta 150  Q
    |||||||||||||||||||||||| ||||||||||||||||    
T  46862816 aaatggtcaaataggtcacttattaagggacggagggagta 46862856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 149 - 242
Target Start/End: Original strand, 37526295 - 37526388
Alignment:
Q  149 taataaaaatacaatattgctcatcaataataaaaatagcaattagagttcaaatttaaataagttcccaatattgctgctctttgagaattat 242  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37526295 taataaaaatacaatattgctcatcaataataaaaatagcaattagagttcaaatttaaataagttcccaatattgctgctctttgagaattat 37526388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 10 - 147
Target Start/End: Complemental strand, 39151037 - 39150900
Alignment:
Q  10 cattacttaaaagtgaaaaagtttcaaaataatgacaagggtaactcagtaaaagtatcactctctttctttcatctttacacnnnnnnnaatctgtgtg 109  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||| |||||||||        ||||||||||    
T  39151037 cattacttaaaagtgaaaaagtttcaaaataatgacaagggcaactcagtaaaagtatcattctctttcttttatctttacatttttcttaatctgtgtg 39150938  T
Q  110 aaatggtcaaataggtcacttattcagggacggaggga 147  Q
    |||||||||||||| ||||||||| |||||||||||||    
T  39150937 aaatggtcaaatagatcacttattaagggacggaggga 39150900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 10 - 150
Target Start/End: Original strand, 38321805 - 38321941
Alignment:
Q  10 cattacttaaaagtgaaaaagtttcaaaataatgacaagggtaactcagtaaaagtatcactctctttctttcatctttacacnnnnnnnaatctgtgtg 109  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||       ||||||||||    
T  38321805 cattacttaaaagtgaaaaagtttcaaaataatgacaagggcaactcagtaaaagtatcactctctttctttcatctttacacttttcttaatctgtgtg 38321904  T
Q  110 aaatggtcaaataggtcacttattcagggacggagggagta 150  Q
    ||||||    |||||||||||||| ||||| | ||||||||    
T  38321905 aaatgg----ataggtcacttattaagggatgaagggagta 38321941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 23 - 146
Target Start/End: Original strand, 46371094 - 46371217
Alignment:
Q  23 tgaaaaagtttcaaaataatgacaagggtaactcagtaaaagtatcactctctttctttcatctttacacnnnnnnnaatctgtgtgaaatggtcaaata 122  Q
    |||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||    
T  46371094 tgaaaaagtttcaaaataatgacaagggcaattcagtaaaagtatcactctctttctttcatctttacacttttcttaatctgtgtgaaatggtcaaata 46371193  T
Q  123 ggtcacttattcagggacggaggg 146  Q
    | ||||||||| ||||||||||||    
T  46371194 gatcacttattaagggacggaggg 46371217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 10 - 150
Target Start/End: Complemental strand, 28036841 - 28036700
Alignment:
Q  10 cattacttaaaagtgaaaaagtttcaaaataatgacaagggtaactcagt-aaaagtatcactctctttctttcatctttacacnnnnnnnaatctgtgt 108  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||| |||| ||||||||||||||||| ||||||||||       ||| |||||    
T  28036841 cattacttaaaagtgaaaaagtttcaaaataatgacaagggcaactcagtaaaaaatatcactctctttcttttatctttacacttttcttaatttgtgt 28036742  T
Q  109 gaaatggtcaaataggtcacttattcagggacggagggagta 150  Q
    |||||||||||||| |||||||||| ||||||| ||||||||    
T  28036741 gaaatggtcaaataagtcacttattaagggacgaagggagta 28036700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 10 - 150
Target Start/End: Original strand, 32045993 - 32046133
Alignment:
Q  10 cattacttaaaagtgaaaaagtttcaaaataatgacaagggtaactcagtaaaagtatcactctctttctttcatctttacacnnnnnnnaatctgtgtg 109  Q
    |||||||||||||||||||||||||||||||| |||||||| ||||| |||||||||||||| |||||||||||| |||||||       ||||||||||    
T  32045993 cattacttaaaagtgaaaaagtttcaaaataacgacaagggcaactcggtaaaagtatcactttctttctttcatttttacacttttcttaatctgtgtg 32046092  T
Q  110 aaatggtcaaataggtcacttattcagggacggagggagta 150  Q
    |||||||||||||  |||||||||||| || ||||||||||    
T  32046093 aaatggtcaaataaatcacttattcagtgatggagggagta 32046133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 10 - 150
Target Start/End: Complemental strand, 1207592 - 1207452
Alignment:
Q  10 cattacttaaaagtgaaaaagtttcaaaataatgacaagggtaactcagtaaaagtatcactctctttctttcatctttacacnnnnnnnaatctgtgtg 109  Q
    ||||||||||||||||||||||||||||||||||||||||| || ||||||||| ||||| | |||||||||||||| |||||       ||||||||||    
T  1207592 cattacttaaaagtgaaaaagtttcaaaataatgacaagggcaattcagtaaaaatatcattatctttctttcatctctacacttttcttaatctgtgtg 1207493  T
Q  110 aaatggtcaaataggtcacttattcagggacggagggagta 150  Q
    |||||||||| |||||||  |||| ||||||||||||||||    
T  1207492 aaatggtcaagtaggtcaagtattaagggacggagggagta 1207452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 10 - 148
Target Start/End: Original strand, 8229223 - 8229362
Alignment:
Q  10 cattacttaaaagtgaaaaagtttcaaaataatgacaagggtaactcagtaaaagtatcactc-tctttctttcatctttacacnnnnnnnaatctgtgt 108  Q
    |||||||||||||||||||||||| |||||||||||||||| |||||||||||| |||||||| | ||| ||||||||||||||       |||||||||    
T  8229223 cattacttaaaagtgaaaaagttttaaaataatgacaagggcaactcagtaaaaatatcactcttttttttttcatctttacacttttcttaatctgtgt 8229322  T
Q  109 gaaatggtcaaataggtcacttattcagggacggagggag 148  Q
    ||||||||||||||  |||||||||||| ||| |||||||    
T  8229323 gaaatggtcaaataaatcacttattcagagaccgagggag 8229362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 10 - 150
Target Start/End: Complemental strand, 40562574 - 40562436
Alignment:
Q  10 cattacttaaaagtgaaaaagtttcaaaataatgacaagggtaactcagtaaaagtatcactctctttctttcatctttacacnnnnnnnaatctgtgtg 109  Q
    ||||||||||||||  ||||||||||||||||| ||||||| || ||||||||| ||||| ||||||||||||||||||||||       ||||||||||    
T  40562574 cattacttaaaagt--aaaagtttcaaaataataacaagggcaattcagtaaaaatatcattctctttctttcatctttacacttttcttaatctgtgtg 40562477  T
Q  110 aaatggtcaaataggtcacttattcagggacggagggagta 150  Q
    |||||||||| |||||||  |||| ||||||||||||||||    
T  40562476 aaatggtcaagtaggtcaagtattgagggacggagggagta 40562436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 117 - 154
Target Start/End: Complemental strand, 46370960 - 46370923
Alignment:
Q  117 caaataggtcacttattcagggacggagggagtaataa 154  Q
    ||||||||||||||||||||||||||||||||||||||    
T  46370960 caaataggtcacttattcagggacggagggagtaataa 46370923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 117 - 153
Target Start/End: Complemental strand, 46862589 - 46862553
Alignment:
Q  117 caaataggtcacttattcagggacggagggagtaata 153  Q
    |||||||||||||||||||||||||||||||||||||    
T  46862589 caaataggtcacttattcagggacggagggagtaata 46862553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 118 - 150
Target Start/End: Complemental strand, 8229095 - 8229063
Alignment:
Q  118 aaataggtcacttattcagggacggagggagta 150  Q
    |||||||||||||||||||||||||||||||||    
T  8229095 aaataggtcacttattcagggacggagggagta 8229063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 117 - 150
Target Start/End: Original strand, 1929483 - 1929516
Alignment:
Q  117 caaataggtcacttattcagggacggagggagta 150  Q
    ||||||||||||||||| ||||||||||||||||    
T  1929483 caaataggtcacttatttagggacggagggagta 1929516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 10 - 150
Target Start/End: Complemental strand, 9129542 - 9129401
Alignment:
Q  10 cattacttaaaagtgaaaaagtttcaaaataatgacaagggtaactcagtaaa---agtatcactctctttctttcatctttacacnnnnnnnaatctgt 106  Q
    |||||||||||||||  ||||||| |||||||| ||||||  || | ||||||   | ||||| ||||||||||| ||||||||||       ||||| |    
T  9129542 cattacttaaaagtg--aaagtttaaaaataataacaaggacaattgagtaaaaatattatcattctctttcttttatctttacacttttgttaatcttt 9129445  T
Q  107 gtgaaatggtcaaataggtcacttattcagggacggagggagta 150  Q
    ||||||| ||||| ||  |||| |||| |||||| |||||||||    
T  9129444 gtgaaatagtcaagtatatcacgtattgagggaccgagggagta 9129401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 117 - 150
Target Start/End: Complemental strand, 32045866 - 32045833
Alignment:
Q  117 caaataggtcacttattcagggacggagggagta 150  Q
    ||||||| ||||||||||||||||||||||||||    
T  32045866 caaatagatcacttattcagggacggagggagta 32045833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 117 - 150
Target Start/End: Complemental strand, 38321678 - 38321645
Alignment:
Q  117 caaataggtcacttattcagggacggagggagta 150  Q
    ||||||||||| ||||||||||||||||||||||    
T  38321678 caaataggtcagttattcagggacggagggagta 38321645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 117 - 150
Target Start/End: Original strand, 39151164 - 39151197
Alignment:
Q  117 caaataggtcacttattcagggacggagggagta 150  Q
    |||||||||||||||||||||||||||| |||||    
T  39151164 caaataggtcacttattcagggacggagagagta 39151197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0519 (Bit Score: 107; Significance: 1e-53; HSPs: 2)
Name: scaffold0519
Description:

Target: scaffold0519; HSP #1
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 10 - 153
Target Start/End: Complemental strand, 10733 - 10590
Alignment:
Q  10 cattacttaaaagtgaaaaagtttcaaaataatgacaagggtaactcagtaaaagtatcactctctttctttcatctttacacnnnnnnnaatctgtgtg 109  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||       ||| | ||||    
T  10733 cattacttaaaagtgaaaaagtttcaaaataatgacaagggcaactcagtaaaagtatcactctctttctttcatctttacacttttcttaatttatgtg 10634  T
Q  110 aaatggtcaaataggtcacttattcagggacggagggagtaata 153  Q
     |||||||||||||||||||||||||||||||||||||||||||    
T  10633 gaatggtcaaataggtcacttattcagggacggagggagtaata 10590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0519; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 117 - 150
Target Start/End: Original strand, 10860 - 10893
Alignment:
Q  117 caaataggtcacttattcagggacggagggagta 150  Q
    ||||||||||||||||||||||||||||||||||    
T  10860 caaataggtcacttattcagggacggagggagta 10893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 105; Significance: 1e-52; HSPs: 16)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 10 - 155
Target Start/End: Complemental strand, 28541727 - 28541582
Alignment:
Q  10 cattacttaaaagtgaaaaagtttcaaaataatgacaagggtaactcagtaaaagtatcactctctttctttcatctttacacnnnnnnnaatctgtgtg 109  Q
    ||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||       |||||||||     
T  28541727 cattacttaaaagtgaaaaagtttcaaaataatgacaagggcaacccagtaaaagtatcactctctttctttcatctttacacttttcttaatctgtgta 28541628  T
Q  110 aaatggtcaaataggtcacttattcagggacggagggagtaataaa 155  Q
    |||||||||||||||||||||||| |||||||||||||||| ||||    
T  28541627 aaatggtcaaataggtcacttatttagggacggagggagtactaaa 28541582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 10 - 150
Target Start/End: Original strand, 12350432 - 12350572
Alignment:
Q  10 cattacttaaaagtgaaaaagtttcaaaataatgacaagggtaactcagtaaaagtatcactctctttctttcatctttacacnnnnnnnaatctgtgtg 109  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||       ||||||||||    
T  12350432 cattacttaaaagtgaaaaagtttcaaaataatgacaagggcaactcagtaaaagcatcactctctttctttcatctttacacttttcttaatctgtgtg 12350531  T
Q  110 aaatggtcaaataggtcacttattcagggacggagggagta 150  Q
    |||||||||||||||||||||||| | ||||||||||||||    
T  12350532 aaatggtcaaataggtcacttatttatggacggagggagta 12350572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 10 - 151
Target Start/End: Original strand, 16435939 - 16436076
Alignment:
Q  10 cattacttaaaagtgaaaaagtttcaaaataatgacaagggtaactcagtaaaagtatcactctctttctttcatctttacacnnnnnnnaatctgtgtg 109  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    |||||||||||||||||||       ||||||||||    
T  16435939 cattacttaaaagtgaaaaagtttcaaaataatgacaagggcaactcagtaaaagtatca----ctttctttcatctttacacttttcttaatctgtgtg 16436034  T
Q  110 aaatggtcaaataggtcacttattcagggacggagggagtaa 151  Q
    ||||| ||||||||||||||||||||||||||||||||||||    
T  16436035 aaatgctcaaataggtcacttattcagggacggagggagtaa 16436076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 10 - 141
Target Start/End: Original strand, 29182751 - 29182882
Alignment:
Q  10 cattacttaaaagtgaaaaagtttcaaaataatgacaagggtaactcagtaaaagtatcactctctttctttcatctttacacnnnnnnnaatctgtgtg 109  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||        ||||||||||    
T  29182751 cattacttaaaagtgaaaaagtttcaaaataatgacaagggcaactcagtaaaaatatcactctctttctttcatctttacatttttcttaatctgtgtg 29182850  T
Q  110 aaatggtcaaataggtcacttattcagggacg 141  Q
    ||||||||||||| |||||||||||| |||||    
T  29182851 aaatggtcaaatatgtcacttattcaaggacg 29182882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 10 - 151
Target Start/End: Original strand, 30736579 - 30736720
Alignment:
Q  10 cattacttaaaagtgaaaaagtttcaaaataatgacaagggtaactcagtaaaagtatcactctctttctttcatctttacacnnnnnnnaatctgtgtg 109  Q
    ||||||||||||||||||||||||||||||||||||||||  || ||||||||| ||||| ||||||||||||||||||||||       ||||||||||    
T  30736579 cattacttaaaagtgaaaaagtttcaaaataatgacaaggacaattcagtaaaaatatcattctctttctttcatctttacacttttcttaatctgtgtg 30736678  T
Q  110 aaatggtcaaataggtcacttattcagggacggagggagtaa 151  Q
    |||| || ||||||||||  |||| || ||||||||||||||    
T  30736679 aaatagttaaataggtcaagtattgagagacggagggagtaa 30736720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 10 - 150
Target Start/End: Original strand, 1241269 - 1241408
Alignment:
Q  10 cattacttaaaagtgaaaaagtttcaaaataatgacaagggtaactcagtaaaagtatcactctctttctttcatctttacacnnnnnnnaatctgtgtg 109  Q
    |||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||| ||||||        ||| ||||||    
T  1241269 cattacttaaaa-tgaaaaagtttcaaaataatgacaagggcaactcagtaaaagtatcactttctttctttcatttttacatttttcttaatttgtgtg 1241367  T
Q  110 aaatggtcaaataggtcacttattcagggacggagggagta 150  Q
    ||||| | |||||| | ||||||||||||||||||||||||    
T  1241368 aaatgatgaaatagattacttattcagggacggagggagta 1241408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 10 - 156
Target Start/End: Complemental strand, 31013635 - 31013489
Alignment:
Q  10 cattacttaaaagtgaaaaagtttcaaaataatgacaagggtaactcagtaaaagtatcactctctttctttcatctttacacnnnnnnnaatctgtgtg 109  Q
    ||||||||||||||||||||||||||||||||||| ||||| || ||||||||| ||||| | |||||||||| | |||||||       ||||||| ||    
T  31013635 cattacttaaaagtgaaaaagtttcaaaataatgataagggcaattcagtaaaaatatcattatctttctttcgtttttacacttttcttaatctgtatg 31013536  T
Q  110 aaatggtcaaataggtcacttattcagggacggagggagtaataaaa 156  Q
    ||||||||||||||||||  |||| ||||||||| ||||||| ||||    
T  31013535 aaatggtcaaataggtcaagtattgagggacggaaggagtaaaaaaa 31013489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 10 - 148
Target Start/End: Original strand, 13042132 - 13042268
Alignment:
Q  10 cattacttaaaagtgaaaaagtttcaaaataatgacaagggtaactcagtaaaagtatcactctctttctttcatctttacacnnnnnnnaatctgtgtg 109  Q
    |||||||||||||||||||  ||| ||| |||||||||||| |||||||||||| ||||||||||||||||||||||||||||       ||||||||||    
T  13042132 cattacttaaaagtgaaaattttttaaa-taatgacaagggcaactcagtaaaaatatcactctctttctttcatctttacac-ttttttaatctgtgtg 13042229  T
Q  110 aaatggtcaaataggtcacttattcagggacggagggag 148  Q
    ||||  |||||||| ||||||||||| ||||||||||||    
T  13042230 aaataatcaaatagatcacttattcaaggacggagggag 13042268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 10 - 119
Target Start/End: Complemental strand, 7271218 - 7271109
Alignment:
Q  10 cattacttaaaagtgaaaaagtttcaaaataatgacaagggtaactcagtaaaagtatcactctctttctttcatctttacacnnnnnnnaatctgtgtg 109  Q
    ||||||||||||||||||||||||||||||||||||||||| || ||||||||| ||||| ||| ||||||||||||||||||       ||||||||||    
T  7271218 cattacttaaaagtgaaaaagtttcaaaataatgacaagggcaattcagtaaaaatatcattctatttctttcatctttacacttttcttaatctgtgtg 7271119  T
Q  110 aaatggtcaa 119  Q
    |||| |||||    
T  7271118 aaattgtcaa 7271109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 12 - 119
Target Start/End: Original strand, 13210506 - 13210610
Alignment:
Q  12 ttacttaaaagtgaaaaagtttcaaaataatgacaagggtaactcagtaaaagtatcactctctttctttcatctttacacnnnnnnnaatctgtgtgaa 111  Q
    ||||||||||||||||  ||||||||||| | |||||||  | |||||||||  |||| ||||||||||||||||||||||       ||||||||||||    
T  13210506 ttacttaaaagtgaaa--gtttcaaaata-taacaagggcgattcagtaaaataatcattctctttctttcatctttacacttttcttaatctgtgtgaa 13210602  T
Q  112 atggtcaa 119  Q
    ||||||||    
T  13210603 atggtcaa 13210610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 10 - 89
Target Start/End: Original strand, 1870694 - 1870771
Alignment:
Q  10 cattacttaaaagtgaaaaagtttcaaaataatgacaagggtaactcagtaaaagtatcactctctttctttcatcttta 89  Q
    |||||||||||||||||   | ||||||||||| ||||||| || | ||||||| ||||| || ||||||||||||||||    
T  1870694 cattacttaaaagtgaag--gcttcaaaataataacaagggcaatttagtaaaaatatcattccctttctttcatcttta 1870771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 115 - 150
Target Start/End: Complemental strand, 18991939 - 18991904
Alignment:
Q  115 gtcaaataggtcacttattcagggacggagggagta 150  Q
    ||||| ||||||||||||||||||||||||||||||    
T  18991939 gtcaactaggtcacttattcagggacggagggagta 18991904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 114 - 152
Target Start/End: Original strand, 2913122 - 2913160
Alignment:
Q  114 ggtcaaataggtcacttattcagggacggagggagtaat 152  Q
    |||||| ||||||||||||| ||||||||||||||||||    
T  2913122 ggtcaactaggtcacttattaagggacggagggagtaat 2913160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 117 - 150
Target Start/End: Complemental strand, 1241142 - 1241109
Alignment:
Q  117 caaataggtcacttattcagggacggagggagta 150  Q
    ||||||| ||||||||||||||||||||||||||    
T  1241142 caaatagatcacttattcagggacggagggagta 1241109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 117 - 150
Target Start/End: Complemental strand, 13042005 - 13041972
Alignment:
Q  117 caaataggtcacttattcagggacggagggagta 150  Q
    ||||||||||||||||||| ||||||||||||||    
T  13042005 caaataggtcacttattcaaggacggagggagta 13041972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 117 - 150
Target Start/End: Complemental strand, 29182624 - 29182591
Alignment:
Q  117 caaataggtcacttattcagggacggagggagta 150  Q
    |||||||||||||||||||||||| |||||||||    
T  29182624 caaataggtcacttattcagggacagagggagta 29182591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 104; Significance: 6e-52; HSPs: 23)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 10 - 150
Target Start/End: Complemental strand, 40232255 - 40232115
Alignment:
Q  10 cattacttaaaagtgaaaaagtttcaaaataatgacaagggtaactcagtaaaagtatcactctctttctttcatctttacacnnnnnnnaatctgtgtg 109  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||       ||||||||||    
T  40232255 cattacttaaaagtgaaaaagtttcaaaataatgacaagggcaactcagtaaaagtatcactctctttcttttatctttacacttttcttaatctgtgtg 40232156  T
Q  110 aaatggtcaaataggtcacttattcagggacggagggagta 150  Q
    |||||||||||||| ||||||||| ||||||||||||||||    
T  40232155 aaatggtcaaatagatcacttattaagggacggagggagta 40232115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 10 - 152
Target Start/End: Original strand, 4041107 - 4041249
Alignment:
Q  10 cattacttaaaagtgaaaaagtttcaaaataatgacaagggtaactcagtaaaagtatcactctctttctttcatctttacacnnnnnnnaatctgtgtg 109  Q
    ||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||| |||||||||||||||||||       ||||||||||    
T  4041107 cattacttaaaagtgaaaaagtttcaaaataatgacaaggacaactcagtaaaagtatcactccctttctttcatctttacacttttcttaatctgtgtg 4041206  T
Q  110 aaatggtcaaataggtcacttattcagggacggagggagtaat 152  Q
    ||||||||||||| |||||||||| ||||||||||||||||||    
T  4041207 aaatggtcaaatatgtcacttattaagggacggagggagtaat 4041249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 10 - 151
Target Start/End: Complemental strand, 27596226 - 27596085
Alignment:
Q  10 cattacttaaaagtgaaaaagtttcaaaataatgacaagggtaactcagtaaaagtatcactctctttctttcatctttacacnnnnnnnaatctgtgtg 109  Q
    ||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||       |||||||||     
T  27596226 cattacttaaaagtgaaaaagtttcaaaataatgacaagggcaacccagtaaaagtatcactctctttctttcatctttacacttttcttaatctgtgta 27596127  T
Q  110 aaatggtcaaataggtcacttattcagggacggagggagtaa 151  Q
    ||||||||||||| |||||||||| |||||||||||||||||    
T  27596126 aaatggtcaaataagtcacttatttagggacggagggagtaa 27596085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 10 - 150
Target Start/End: Original strand, 6392431 - 6392571
Alignment:
Q  10 cattacttaaaagtgaaaaagtttcaaaataatgacaagggtaactcagtaaaagtatcactctctttctttcatctttacacnnnnnnnaatctgtgtg 109  Q
    ||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||       ||||||||||    
T  6392431 cattacttaaaagtgaaaaagtttcaaaataatgacaagggcaacttagtaaaagtatcactctctttctttcatctttacacttttcttaatctgtgtg 6392530  T
Q  110 aaatggtcaaataggtcacttattcagggacggagggagta 150  Q
    ||||||| ||||| |||||||||||| ||||||||||||||    
T  6392531 aaatggtaaaatatgtcacttattcaaggacggagggagta 6392571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 16 - 142
Target Start/End: Complemental strand, 31689487 - 31689361
Alignment:
Q  16 ttaaaagtgaaaaagtttcaaaataatgacaagggtaactcagtaaaagtatcactctctttctttcatctttacacnnnnnnnaatctgtgtgaaatgg 115  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||    
T  31689487 ttaaaagtgaaaaagtttcaaaataatgacaagggcaactcagtaaaagtatcactctctttctttcatctttacacttttcttaatctgtgtgaaatgg 31689388  T
Q  116 tcaaataggtcacttattcagggacgg 142  Q
    | ||||| |||||||||| ||||||||    
T  31689387 tgaaatatgtcacttatttagggacgg 31689361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 10 - 150
Target Start/End: Complemental strand, 25943787 - 25943649
Alignment:
Q  10 cattacttaaaagtgaaaaagtttcaaaataatgacaagggtaactcagtaaaagtatcactctctttctttcatctttacacnnnnnnnaatctgtgtg 109  Q
    |||||||||||||||||||||||||||||||||||||| || || |||||||||||||||||||||||||||||||||||||        ||||  ||||    
T  25943787 cattacttaaaagtgaaaaagtttcaaaataatgacaatggcaattcagtaaaagtatcactctctttctttcatctttacaattttcttaatc--tgtg 25943690  T
Q  110 aaatggtcaaataggtcacttattcagggacggagggagta 150  Q
    ||||| |||||||||||||||||||||||||||||||||||    
T  25943689 aaatgatcaaataggtcacttattcagggacggagggagta 25943649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 10 - 139
Target Start/End: Original strand, 29737565 - 29737694
Alignment:
Q  10 cattacttaaaagtgaaaaagtttcaaaataatgacaagggtaactcagtaaaagtatcactctctttctttcatctttacacnnnnnnnaatctgtgtg 109  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| || |||||||       ||||||||||    
T  29737565 cattacttaaaagtgaaaaagtttcaaaataatgacaagggcaactcagtaaaagtatcactctctttcttttatttttacacttttcttaatctgtgtg 29737664  T
Q  110 aaatggtcaaataggtcacttattcaggga 139  Q
    ||||||||||||| |||||||||| |||||    
T  29737665 aaatggtcaaataagtcacttattaaggga 29737694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 10 - 151
Target Start/End: Complemental strand, 41427788 - 41427647
Alignment:
Q  10 cattacttaaaagtgaaaaagtttcaaaataatgacaagggtaactcagtaaaagtatcactctctttctttcatctttacacnnnnnnnaatctgtgtg 109  Q
    ||||||||||||||||||||||||||||||||||||||||| || ||| ||||||||| ||||||||||||||||||||||||       ||||||||||    
T  41427788 cattacttaaaagtgaaaaagtttcaaaataatgacaagggcaattcaataaaagtattactctctttctttcatctttacactttttttaatctgtgtg 41427689  T
Q  110 aaatggtcaaataggtcacttattcagggacggagggagtaa 151  Q
    ||||| ||||||||  || ||||| || ||||||||||||||    
T  41427688 aaatgatcaaatagaccatttatttagagacggagggagtaa 41427647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 30 - 150
Target Start/End: Original strand, 22338148 - 22338268
Alignment:
Q  30 gtttcaaaataatgacaagggtaactcagtaaaagtatcactctctttctttcatctttacacnnnnnnnaatctgtgtgaaatggtcaaataggtcact 129  Q
    |||| |||||||| | ||||| || ||||||||| ||||||||||||||||||||||||||||       ||||||||||||||||| || |||||||||    
T  22338148 gtttaaaaataataataagggcaattcagtaaaaatatcactctctttctttcatctttacacttttcttaatctgtgtgaaatggttaagtaggtcact 22338247  T
Q  130 tattcagggacggagggagta 150  Q
    |||| ||||||||||||||||    
T  22338248 tatttagggacggagggagta 22338268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 10 - 90
Target Start/End: Complemental strand, 38276685 - 38276605
Alignment:
Q  10 cattacttaaaagtgaaaaagtttcaaaataatgacaagggtaactcagtaaaagtatcactctctttctttcatctttac 90  Q
    ||||||||||||||||||||||||||||||||||||||||| || |||||||||  |||| ||||||||||||||||||||    
T  38276685 cattacttaaaagtgaaaaagtttcaaaataatgacaagggcaattcagtaaaaacatcattctctttctttcatctttac 38276605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 44 - 133
Target Start/End: Complemental strand, 24300260 - 24300171
Alignment:
Q  44 acaagggtaactcagtaaaagtatcactctctttctttcatctttacacnnnnnnnaatctgtgtgaaatggtcaaataggtcacttatt 133  Q
    ||||||| |||||||||||||||||||||||||||||||||||| ||||       ||||||||||||||||||||||| ||||||||||    
T  24300260 acaagggcaactcagtaaaagtatcactctctttctttcatcttcacacttttcttaatctgtgtgaaatggtcaaatatgtcacttatt 24300171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 30 - 141
Target Start/End: Original strand, 22619930 - 22620041
Alignment:
Q  30 gtttcaaaataatgacaagggtaactcagtaaaagtatcactctctttctttcatctttacacnnnnnnnaatctgtgtgaaatggtcaaataggtcact 129  Q
    |||| |||||||| | || || || ||| ||||| ||||||||||||||||||||||||||||       ||||||||||||||| |||| |||||||||    
T  22619930 gtttaaaaataataataaaggcaattcaataaaaatatcactctctttctttcatctttacacttttcttaatctgtgtgaaatgatcaagtaggtcact 22620029  T
Q  130 tattcagggacg 141  Q
    ||||||||||||    
T  22620030 tattcagggacg 22620041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 8 - 144
Target Start/End: Complemental strand, 21442940 - 21442806
Alignment:
Q  8 accattacttaaaagtgaaaaagtttcaaaataatgacaagggtaactcagtaaaagtatcactctctttctttcatctttacacnnnnnnnaatctgtg 107  Q
    ||||||||||||||||||||  ||||||||||||| ||||||| || | ||||||| ||||| ||| ||| ||||||||||||||       |||||||     
T  21442940 accattacttaaaagtgaaa--gtttcaaaataataacaagggcaatttagtaaaaatatcattctatttttttcatctttacacttttcttaatctgta 21442843  T
Q  108 tgaaatggtcaaataggtcacttattcagggacggag 144  Q
    ||||||||| || |||||||  |||| ||||||||||    
T  21442842 tgaaatggtgaagtaggtcaaatattgagggacggag 21442806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 117 - 150
Target Start/End: Complemental strand, 22337743 - 22337710
Alignment:
Q  117 caaataggtcacttattcagggacggagggagta 150  Q
    ||||||||||||||||||||||||||||||||||    
T  22337743 caaataggtcacttattcagggacggagggagta 22337710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 117 - 150
Target Start/End: Original strand, 27596352 - 27596385
Alignment:
Q  117 caaataggtcacttattcagggacggagggagta 150  Q
    ||||||||||||||||||||||||||||||||||    
T  27596352 caaataggtcacttattcagggacggagggagta 27596385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 117 - 150
Target Start/End: Complemental strand, 29737438 - 29737405
Alignment:
Q  117 caaataggtcacttattcagggacggagggagta 150  Q
    ||||||||||||||||||||||||||||||||||    
T  29737438 caaataggtcacttattcagggacggagggagta 29737405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 117 - 148
Target Start/End: Original strand, 25943912 - 25943943
Alignment:
Q  117 caaataggtcacttattcagggacggagggag 148  Q
    ||||||||||||||||||||||||||||||||    
T  25943912 caaataggtcacttattcagggacggagggag 25943943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 117 - 151
Target Start/End: Complemental strand, 4040980 - 4040946
Alignment:
Q  117 caaataggtcacttattcagggacggagggagtaa 151  Q
    |||||||||||||||||||| ||||||||||||||    
T  4040980 caaataggtcacttattcagagacggagggagtaa 4040946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 100 - 150
Target Start/End: Complemental strand, 7380585 - 7380535
Alignment:
Q  100 aatctgtgtgaaatggtcaaataggtcacttattcagggacggagggagta 150  Q
    |||||||||||||||||||| ||| |||||||||||  |||||||| ||||    
T  7380585 aatctgtgtgaaatggtcaagtagatcacttattcaaagacggaggaagta 7380535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 117 - 150
Target Start/End: Complemental strand, 22619557 - 22619524
Alignment:
Q  117 caaataggtcacttattcagggacggagggagta 150  Q
    ||||||||||||||||||||| ||||||||||||    
T  22619557 caaataggtcacttattcaggaacggagggagta 22619524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 117 - 150
Target Start/End: Original strand, 31689620 - 31689653
Alignment:
Q  117 caaataggtcacttattcagggacggagggagta 150  Q
    ||||||||||||||||||||||||| ||||||||    
T  31689620 caaataggtcacttattcagggacgaagggagta 31689653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 117 - 150
Target Start/End: Original strand, 40232382 - 40232415
Alignment:
Q  117 caaataggtcacttattcagggacggagggagta 150  Q
    ||||||||||||||||||| ||||||||||||||    
T  40232382 caaataggtcacttattcaaggacggagggagta 40232415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 117 - 153
Target Start/End: Original strand, 24300411 - 24300447
Alignment:
Q  117 caaataggtcacttattcagggacggagggagtaata 153  Q
    |||||||||||||||||||  ||||||||||||||||    
T  24300411 caaataggtcacttattcaaagacggagggagtaata 24300447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 100; Significance: 1e-49; HSPs: 2)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 10 - 150
Target Start/End: Complemental strand, 92309 - 92169
Alignment:
Q  10 cattacttaaaagtgaaaaagtttcaaaataatgacaagggtaactcagtaaaagtatcactctctttctttcatctttacacnnnnnnnaatctgtgtg 109  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||       ||||| ||||    
T  92309 cattacttaaaagtgaaaaagtttcaaaataatgacaagggcaactcagtaaaagtgtcactctctttctttcatctttacacttttcttaatctatgtg 92210  T
Q  110 aaatggtcaaataggtcacttattcagggacggagggagta 150  Q
    ||||||||| |||||||||||||||||| ||||||||||||    
T  92209 aaatggtcacataggtcacttattcaggaacggagggagta 92169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 117 - 153
Target Start/End: Original strand, 92387 - 92423
Alignment:
Q  117 caaataggtcacttattcagggacggagggagtaata 153  Q
    ||||||| |||||||||||| ||||||||||||||||    
T  92387 caaatagatcacttattcagagacggagggagtaata 92423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061 (Bit Score: 96; Significance: 3e-47; HSPs: 1)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 10 - 150
Target Start/End: Complemental strand, 10157 - 10017
Alignment:
Q  10 cattacttaaaagtgaaaaagtttcaaaataatgacaagggtaactcagtaaaagtatcactctctttctttcatctttacacnnnnnnnaatctgtgtg 109  Q
    ||||||||||||||||||||||||||||||||| ||||||| |||||||||||| ||||||||||||||||| ||||||||||       ||||||||||    
T  10157 cattacttaaaagtgaaaaagtttcaaaataataacaagggcaactcagtaaaaatatcactctctttcttttatctttacacttttcttaatctgtgtg 10058  T
Q  110 aaatggtcaaataggtcacttattcagggacggagggagta 150  Q
    |||||||||||||||||||||||| ||||| ||||||||||    
T  10057 aaatggtcaaataggtcacttattaagggatggagggagta 10017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 92; Significance: 9e-45; HSPs: 2)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 10 - 150
Target Start/End: Original strand, 69913 - 70053
Alignment:
Q  10 cattacttaaaagtgaaaaagtttcaaaataatgacaagggtaactcagtaaaagtatcactctctttctttcatctttacacnnnnnnnaatctgtgtg 109  Q
    ||||||||||||||||||||||||||||||||||||||||  |||||||||||| ||||||||||||||||||||||||||||       ||||||| |     
T  69913 cattacttaaaagtgaaaaagtttcaaaataatgacaaggacaactcagtaaaattatcactctctttctttcatctttacacttttcttaatctgtatc 70012  T
Q  110 aaatggtcaaataggtcacttattcagggacggagggagta 150  Q
    ||||||||||||| |||||||||| ||||||||||||||||    
T  70013 aaatggtcaaataagtcacttatttagggacggagggagta 70053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 117 - 150
Target Start/End: Complemental strand, 69786 - 69753
Alignment:
Q  117 caaataggtcacttattcagggacggagggagta 150  Q
    |||||| |||||||||||||||||||||||||||    
T  69786 caaatatgtcacttattcagggacggagggagta 69753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0532 (Bit Score: 84; Significance: 5e-40; HSPs: 1)
Name: scaffold0532
Description:

Target: scaffold0532; HSP #1
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 10 - 150
Target Start/End: Original strand, 3974 - 4114
Alignment:
Q  10 cattacttaaaagtgaaaaagtttcaaaataatgacaagggtaactcagtaaaagtatcactctctttctttcatctttacacnnnnnnnaatctgtgtg 109  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||| | |||| ||| |||||||||||| |       ||||||||||    
T  3974 cattacttaaaagtgaaaaagttttaaaataatgacaagggtaactcagtaaaagtagcgctctttttttttcatctttacccttttcttaatctgtgtg 4073  T
Q  110 aaatggtcaaataggtcacttattcagggacggagggagta 150  Q
    |||||||||||||| | | ||||||||||||||||||||||    
T  4074 aaatggtcaaatagattatttattcagggacggagggagta 4114  T

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Target: scaffold0318 (Bit Score: 61; Significance: 3e-26; HSPs: 2)
Name: scaffold0318
Description:

Target: scaffold0318; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 10 - 147
Target Start/End: Original strand, 16517 - 16641
Alignment:
Q  10 cattacttaaaagtgaaaaagtttcaaaataatgacaagggtaactcagtaaaagtatcactctctttctttcatctttacacnnnnnnnaatctgtgtg 109  Q
    |||||||||||||||||||||||||||||||||||||| || |||             |||||||||||||||||||||||||       ||||||||||    
T  16517 cattacttaaaagtgaaaaagtttcaaaataatgacaaaggcaac-------------cactctctttctttcatctttacacttttcttaatctgtgtg 16603  T
Q  110 aaatggtcaaataggtcacttattcagggacggaggga 147  Q
    |||||||||||||||||||||||| |||||||||||||    
T  16604 aaatggtcaaataggtcacttatttagggacggaggga 16641  T

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Target: scaffold0318; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 117 - 150
Target Start/End: Complemental strand, 16390 - 16357
Alignment:
Q  117 caaataggtcacttattcagggacggagggagta 150  Q
    ||||||||||||||||||||||||||||||||||    
T  16390 caaataggtcacttattcagggacggagggagta 16357  T

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Target: scaffold1194 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold1194
Description:

Target: scaffold1194; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 10 - 151
Target Start/End: Original strand, 1130 - 1268
Alignment:
Q  10 cattacttaaaagtgaaaaagtttcaaaataatgacaagggtaactcagtaaaagtatcactctctttctttcatctttacacnnnnnnnaatctgtgtg 109  Q
    |||||||||||||||||   ||||||||||||| ||||| | || ||||||||| ||||| ||||||||||||||||||||||       ||| ||||||    
T  1130 cattacttaaaagtgaag--gtttcaaaataataacaagagcaattcagtaaaaatatcattctctttctttcatctttacac-ttgtttaatttgtgtg 1226  T
Q  110 aaatggtcaaataggtcacttattcagggacggagggagtaa 151  Q
    |||||||||| ||||| |  |||| |||||||||||||||||    
T  1227 aaatggtcaagtaggtgaagtattgagggacggagggagtaa 1268  T

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Target: scaffold0459 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0459
Description:

Target: scaffold0459; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 115 - 155
Target Start/End: Complemental strand, 12787 - 12747
Alignment:
Q  115 gtcaaataggtcacttattcagggacggagggagtaataaa 155  Q
    ||||| ||||||||||||| |||||||||||||||||||||    
T  12787 gtcaactaggtcacttatttagggacggagggagtaataaa 12747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0366 (Bit Score: 33; Significance: 0.000000001; HSPs: 2)
Name: scaffold0366
Description:

Target: scaffold0366; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 115 - 155
Target Start/End: Complemental strand, 10428 - 10388
Alignment:
Q  115 gtcaaataggtcacttattcagggacggagggagtaataaa 155  Q
    ||||| ||||||||||||| |||||||||||||||||||||    
T  10428 gtcaactaggtcacttatttagggacggagggagtaataaa 10388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0366; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 115 - 155
Target Start/End: Complemental strand, 14094 - 14054
Alignment:
Q  115 gtcaaataggtcacttattcagggacggagggagtaataaa 155  Q
    ||||| ||||||||||||| |||||||||||||||||||||    
T  14094 gtcaactaggtcacttatttagggacggagggagtaataaa 14054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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