View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19289_high_65 (Length: 242)

Name: NF19289_high_65
Description: NF19289
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19289_high_65
NF19289_high_65
[»] chr8 (37 HSPs)
chr8 (18-220)||(8882250-8882451)
chr8 (33-214)||(38815206-38815403)
chr8 (18-215)||(6592487-6592699)
chr8 (24-104)||(39434705-39434785)
chr8 (28-220)||(3187876-3188083)
chr8 (30-151)||(35739981-35740102)
chr8 (18-207)||(24124947-24125152)
chr8 (24-227)||(500141-500345)
chr8 (44-227)||(6618184-6618382)
chr8 (27-151)||(25021806-25021930)
chr8 (18-151)||(28196183-28196316)
chr8 (150-211)||(24451036-24451096)
chr8 (24-131)||(8619825-8619932)
chr8 (156-214)||(4699783-4699841)
chr8 (150-215)||(22589467-22589532)
chr8 (65-151)||(37514212-37514298)
chr8 (156-220)||(42659133-42659197)
chr8 (150-213)||(4066758-4066821)
chr8 (156-215)||(39434578-39434637)
chr8 (18-73)||(37517163-37517218)
chr8 (150-212)||(25021945-25022007)
chr8 (150-215)||(18804524-18804588)
chr8 (18-75)||(22589337-22589394)
chr8 (154-214)||(5329737-5329797)
chr8 (34-129)||(39671170-39671266)
chr8 (44-131)||(6120976-6121063)
chr8 (44-131)||(8540386-8540473)
chr8 (92-151)||(22589394-22589452)
chr8 (150-212)||(9259423-9259485)
chr8 (48-117)||(12320206-12320275)
chr8 (34-131)||(36004133-36004230)
chr8 (150-194)||(3821156-3821200)
chr8 (153-205)||(3825556-3825608)
chr8 (27-131)||(4699881-4699983)
chr8 (150-206)||(6792189-6792245)
chr8 (168-212)||(8227984-8228028)
chr8 (44-100)||(10189585-10189641)
[»] chr7 (52 HSPs)
chr7 (25-220)||(21326828-21327039)
chr7 (18-215)||(19277202-19277417)
chr7 (18-215)||(982860-983073)
chr7 (18-215)||(4501170-4501382)
chr7 (25-214)||(22197899-22198103)
chr7 (25-214)||(22239718-22239922)
chr7 (62-213)||(48539094-48539261)
chr7 (18-153)||(30216041-30216176)
chr7 (25-213)||(42295174-42295378)
chr7 (27-151)||(24527580-24527704)
chr7 (26-216)||(2904290-2904481)
chr7 (24-215)||(45613831-45614038)
chr7 (31-131)||(40726476-40726576)
chr7 (28-131)||(32584612-32584715)
chr7 (18-104)||(28517270-28517356)
chr7 (18-151)||(10905109-10905241)
chr7 (24-151)||(27521462-27521589)
chr7 (24-151)||(43856865-43856992)
chr7 (18-104)||(3676677-3676763)
chr7 (44-151)||(9281140-9281247)
chr7 (44-151)||(9292111-9292218)
chr7 (150-213)||(27027761-27027824)
chr7 (18-131)||(5825284-5825395)
chr7 (150-212)||(28517418-28517480)
chr7 (80-213)||(5972261-5972410)
chr7 (150-220)||(34772688-34772758)
chr7 (150-212)||(41117901-41117963)
chr7 (150-215)||(45003028-45003093)
chr7 (28-128)||(34067855-34067954)
chr7 (151-215)||(45974731-45974795)
chr7 (47-131)||(47679136-47679220)
chr7 (156-215)||(5825184-5825243)
chr7 (28-103)||(7637505-7637579)
chr7 (27-106)||(34772817-34772896)
chr7 (150-212)||(27521385-27521447)
chr7 (156-212)||(40726617-40726673)
chr7 (150-213)||(24527502-24527565)
chr7 (27-98)||(25186928-25186999)
chr7 (165-212)||(38839240-38839287)
chr7 (150-213)||(43333961-43334024)
chr7 (150-212)||(5714954-5715016)
chr7 (150-212)||(43856788-43856850)
chr7 (150-187)||(10905057-10905094)
chr7 (150-214)||(23037457-23037521)
chr7 (149-213)||(36558997-36559061)
chr7 (150-213)||(25187062-25187125)
chr7 (65-131)||(6634993-6635059)
chr7 (150-220)||(9281267-9281337)
chr7 (150-220)||(9292238-9292308)
chr7 (47-131)||(23793023-23793107)
chr7 (150-186)||(6635094-6635130)
chr7 (56-151)||(10032192-10032287)
[»] chr3 (47 HSPs)
chr3 (25-215)||(53785620-53785826)
chr3 (18-215)||(39583212-39583425)
chr3 (24-216)||(44198677-44198885)
chr3 (36-215)||(32546706-32546901)
chr3 (17-151)||(52741494-52741628)
chr3 (18-131)||(7900869-7900982)
chr3 (24-213)||(3443301-3443506)
chr3 (26-148)||(37132990-37133112)
chr3 (27-215)||(26772669-26772873)
chr3 (33-131)||(49017974-49018072)
chr3 (44-124)||(38670889-38670969)
chr3 (24-104)||(46940759-46940839)
chr3 (47-220)||(52411903-52412092)
chr3 (44-151)||(51234607-51234714)
chr3 (150-217)||(4669794-4669861)
chr3 (18-214)||(13582422-13582633)
chr3 (24-122)||(4473081-4473179)
chr3 (24-151)||(5338634-5338764)
chr3 (27-131)||(7502003-7502108)
chr3 (150-214)||(4763924-4763987)
chr3 (154-230)||(7257691-7257767)
chr3 (44-151)||(21552659-21552765)
chr3 (150-213)||(38145969-38146032)
chr3 (150-212)||(38671011-38671073)
chr3 (150-220)||(38978930-38979000)
chr3 (58-131)||(54508407-54508480)
chr3 (47-151)||(26856774-26856878)
chr3 (150-214)||(26856893-26856957)
chr3 (154-213)||(21552577-21552636)
chr3 (150-215)||(44744-44812)
chr3 (154-212)||(4472976-4473034)
chr3 (150-212)||(7900772-7900834)
chr3 (167-220)||(25094720-25094773)
chr3 (164-213)||(26276528-26276577)
chr3 (150-215)||(37133130-37133195)
chr3 (63-124)||(38978827-38978888)
chr3 (150-215)||(52741643-52741708)
chr3 (57-129)||(38146069-38146141)
chr3 (27-90)||(37992384-37992447)
chr3 (28-131)||(43123156-43123259)
chr3 (154-209)||(54508519-54508574)
chr3 (173-211)||(5338561-5338599)
chr3 (150-212)||(25324943-25325005)
chr3 (156-218)||(26393823-26393885)
chr3 (150-215)||(35484811-35484876)
chr3 (164-213)||(49017880-49017929)
chr3 (24-153)||(25325018-25325149)
[»] chr2 (39 HSPs)
chr2 (18-215)||(4413049-4413262)
chr2 (18-213)||(41867891-41868101)
chr2 (25-215)||(9685405-9685611)
chr2 (23-215)||(17344549-17344757)
chr2 (18-215)||(28224911-28225124)
chr2 (18-151)||(5532411-5532543)
chr2 (18-151)||(19161766-19161899)
chr2 (26-123)||(23484929-23485025)
chr2 (37-151)||(18744956-18745070)
chr2 (52-151)||(2886632-2886731)
chr2 (24-131)||(2888527-2888634)
chr2 (44-153)||(34814828-34814936)
chr2 (150-214)||(13413263-13413327)
chr2 (63-151)||(20142753-20142841)
chr2 (25-131)||(13147087-13147196)
chr2 (18-105)||(27502399-27502486)
chr2 (47-107)||(32029098-32029158)
chr2 (44-213)||(11921219-11921398)
chr2 (44-131)||(33612556-33612643)
chr2 (27-131)||(44686427-44686535)
chr2 (18-96)||(1296033-1296111)
chr2 (18-131)||(3825737-3825851)
chr2 (150-220)||(27494217-27494287)
chr2 (150-215)||(18745085-18745150)
chr2 (154-215)||(27502273-27502334)
chr2 (150-209)||(24765178-24765237)
chr2 (85-151)||(13413342-13413408)
chr2 (158-212)||(15515286-15515340)
chr2 (150-212)||(16351975-16352037)
chr2 (27-84)||(16351833-16351890)
chr2 (28-104)||(5679316-5679392)
chr2 (156-212)||(23485073-23485129)
chr2 (150-194)||(44686348-44686392)
chr2 (162-213)||(10296669-10296720)
chr2 (150-213)||(19161914-19161977)
chr2 (150-209)||(24762918-24762977)
chr2 (164-218)||(26407839-26407893)
chr2 (181-218)||(3208406-3208443)
chr2 (28-100)||(3968402-3968474)
[»] scaffold0490 (2 HSPs)
scaffold0490 (24-151)||(6325-6452)
scaffold0490 (150-181)||(6279-6310)
[»] chr1 (43 HSPs)
chr1 (24-212)||(34644480-34644684)
chr1 (24-215)||(21472914-21473121)
chr1 (27-215)||(22346806-22347010)
chr1 (18-124)||(19035465-19035571)
chr1 (25-151)||(28041117-28041243)
chr1 (27-151)||(29169785-29169909)
chr1 (25-151)||(31737313-31737439)
chr1 (26-151)||(20259788-20259913)
chr1 (18-131)||(45659631-45659744)
chr1 (28-151)||(2898693-2898819)
chr1 (33-218)||(2764387-2764588)
chr1 (50-215)||(24177526-24177707)
chr1 (24-96)||(50161406-50161478)
chr1 (24-151)||(4861978-4862105)
chr1 (154-227)||(4611088-4611161)
chr1 (47-151)||(38731600-38731704)
chr1 (28-85)||(35387653-35387710)
chr1 (150-214)||(30688469-30688533)
chr1 (174-227)||(1114023-1114076)
chr1 (152-213)||(45835319-45835380)
chr1 (24-104)||(25375822-25375902)
chr1 (164-215)||(5454006-5454057)
chr1 (171-214)||(7483796-7483839)
chr1 (150-215)||(868534-868597)
chr1 (150-212)||(6670236-6670298)
chr1 (42-131)||(18616160-18616249)
chr1 (30-100)||(50314619-50314689)
chr1 (47-100)||(23993478-23993531)
chr1 (150-189)||(7213187-7213226)
chr1 (23-90)||(23043929-23043996)
chr1 (157-220)||(29170322-29170385)
chr1 (150-189)||(38731546-38731585)
chr1 (157-214)||(21934289-21934347)
chr1 (165-215)||(28493477-28493527)
chr1 (28-122)||(36486906-36487000)
chr1 (26-96)||(37200028-37200098)
chr1 (150-211)||(11128385-11128446)
chr1 (150-215)||(45659777-45659842)
chr1 (170-214)||(2898614-2898658)
chr1 (24-104)||(16500072-16500152)
chr1 (150-214)||(31737454-31737517)
chr1 (27-131)||(37932210-37932313)
chr1 (28-104)||(42919898-42919973)
[»] chr4 (55 HSPs)
chr4 (27-212)||(600684-600885)
chr4 (18-104)||(53619624-53619710)
chr4 (24-227)||(34107683-34107904)
chr4 (50-190)||(50483211-50483352)
chr4 (24-151)||(56462096-56462222)
chr4 (18-215)||(31847014-31847211)
chr4 (24-99)||(23255747-23255822)
chr4 (18-131)||(132396-132509)
chr4 (24-105)||(55933451-55933532)
chr4 (57-153)||(7536593-7536689)
chr4 (18-124)||(50000908-50001015)
chr4 (24-129)||(30940728-30940832)
chr4 (31-115)||(16957569-16957653)
chr4 (150-212)||(4419177-4419239)
chr4 (150-215)||(3329907-3329972)
chr4 (24-104)||(50462935-50463015)
chr4 (24-227)||(26521388-26521606)
chr4 (157-215)||(39001308-39001366)
chr4 (44-105)||(48656919-48656980)
chr4 (156-212)||(55933597-55933653)
chr4 (44-151)||(6865829-6865936)
chr4 (156-215)||(53619497-53619556)
chr4 (34-151)||(53170504-53170615)
chr4 (150-211)||(18981670-18981729)
chr4 (150-214)||(50442610-50442674)
chr4 (24-131)||(12918361-12918468)
chr4 (150-213)||(16955373-16955436)
chr4 (150-217)||(25504204-25504271)
chr4 (150-213)||(48657046-48657109)
chr4 (150-213)||(50001057-50001120)
chr4 (18-123)||(12053432-12053537)
chr4 (150-211)||(38535700-38535760)
chr4 (37-153)||(43849350-43849466)
chr4 (26-122)||(46440880-46440976)
chr4 (61-124)||(3330014-3330077)
chr4 (57-131)||(11562909-11562983)
chr4 (150-208)||(23255631-23255689)
chr4 (150-204)||(56462237-56462291)
chr4 (149-218)||(8738113-8738182)
chr4 (59-104)||(24719972-24720017)
chr4 (34-150)||(28739897-28740014)
chr4 (150-215)||(30940863-30940928)
chr4 (150-226)||(23242800-23242876)
chr4 (164-200)||(52022054-52022090)
chr4 (44-147)||(25504290-25504393)
chr4 (150-213)||(45661604-45661667)
chr4 (150-213)||(50464427-50464490)
chr4 (27-125)||(45386053-45386151)
chr4 (60-153)||(53098410-53098503)
chr4 (156-213)||(7536708-7536765)
chr4 (159-212)||(34213534-34213587)
chr4 (150-186)||(28739845-28739881)
chr4 (150-206)||(40005289-40005345)
chr4 (150-218)||(42455738-42455806)
chr4 (150-194)||(46391443-46391487)
[»] chr5 (48 HSPs)
chr5 (24-151)||(37873627-37873754)
chr5 (24-220)||(35310354-35310566)
chr5 (18-123)||(13166893-13166998)
chr5 (24-159)||(26212572-26212708)
chr5 (25-131)||(15292016-15292122)
chr5 (18-124)||(38875656-38875762)
chr5 (24-105)||(14423715-14423796)
chr5 (18-220)||(25663015-25663233)
chr5 (18-212)||(32269780-32269990)
chr5 (27-150)||(34335329-34335452)
chr5 (44-130)||(42921709-42921795)
chr5 (24-103)||(27336732-27336811)
chr5 (18-105)||(33692038-33692125)
chr5 (24-131)||(43129545-43129652)
chr5 (28-104)||(3114156-3114232)
chr5 (24-115)||(32230496-32230587)
chr5 (60-131)||(14723269-14723340)
chr5 (44-131)||(35455967-35456054)
chr5 (150-215)||(430513-430578)
chr5 (150-215)||(2566226-2566291)
chr5 (67-151)||(22188687-22188771)
chr5 (150-214)||(23023507-23023571)
chr5 (58-104)||(430640-430686)
chr5 (23-89)||(8858969-8859035)
chr5 (30-104)||(9829348-9829421)
chr5 (23-131)||(8100563-8100671)
chr5 (70-130)||(41343473-41343533)
chr5 (159-212)||(15292165-15292218)
chr5 (47-103)||(43115469-43115525)
chr5 (150-213)||(42921611-42921673)
chr5 (156-194)||(13167047-13167085)
chr5 (154-212)||(22188790-22188848)
chr5 (63-151)||(7716172-7716261)
chr5 (174-211)||(12033346-12033383)
chr5 (150-215)||(27336606-27336671)
chr5 (44-104)||(26577409-26577469)
chr5 (180-220)||(33894018-33894058)
chr5 (162-214)||(34475953-34476005)
chr5 (150-216)||(38875551-38875614)
chr5 (18-63)||(433371-433416)
chr5 (34-101)||(14436541-14436605)
chr5 (150-203)||(15809972-15810025)
chr5 (150-203)||(15832985-15833038)
chr5 (150-187)||(24113514-24113551)
chr5 (44-104)||(13307394-13307454)
chr5 (150-213)||(14423600-14423661)
chr5 (150-214)||(15506746-15506810)
chr5 (150-214)||(37873769-37873833)
[»] scaffold1768 (1 HSPs)
scaffold1768 (18-214)||(167-379)
[»] chr6 (33 HSPs)
chr6 (25-151)||(4206586-4206712)
chr6 (24-215)||(17249294-17249501)
chr6 (18-151)||(45660-45793)
chr6 (32-131)||(4165919-4166018)
chr6 (18-131)||(33220694-33220807)
chr6 (23-104)||(34415474-34415555)
chr6 (27-131)||(959591-959695)
chr6 (18-104)||(34304534-34304620)
chr6 (150-214)||(3137378-3137442)
chr6 (26-104)||(357708-357786)
chr6 (23-131)||(28625941-28626050)
chr6 (150-215)||(32115629-32115694)
chr6 (24-97)||(34168913-34168986)
chr6 (25-117)||(28543400-28543492)
chr6 (27-103)||(29338071-29338147)
chr6 (44-151)||(24016328-24016435)
chr6 (24-122)||(34554266-34554364)
chr6 (159-212)||(357856-357909)
chr6 (157-215)||(33220849-33220907)
chr6 (157-214)||(959493-959550)
chr6 (150-211)||(4206727-4206788)
chr6 (166-215)||(7749392-7749441)
chr6 (24-104)||(6225110-6225190)
chr6 (150-214)||(34168833-34168896)
chr6 (150-211)||(4166053-4166114)
chr6 (58-151)||(26225602-26225695)
chr6 (150-187)||(29338210-29338247)
chr6 (154-215)||(34304407-34304468)
chr6 (44-104)||(3714955-3715015)
chr6 (26-104)||(28008978-28009059)
chr6 (151-213)||(28625844-28625906)
chr6 (24-89)||(12401384-12401449)
chr6 (150-214)||(28009118-28009182)
[»] scaffold0009 (1 HSPs)
scaffold0009 (23-215)||(103017-103224)
[»] scaffold0148 (2 HSPs)
scaffold0148 (28-151)||(33241-33364)
scaffold0148 (156-214)||(33162-33220)
[»] scaffold0470 (1 HSPs)
scaffold0470 (44-227)||(7502-7700)
[»] scaffold0186 (1 HSPs)
scaffold0186 (24-131)||(10371-10482)
[»] scaffold0110 (1 HSPs)
scaffold0110 (24-105)||(47528-47609)
[»] scaffold0031 (1 HSPs)
scaffold0031 (48-105)||(49448-49505)
[»] scaffold0493 (1 HSPs)
scaffold0493 (44-128)||(8525-8609)
[»] scaffold0361 (1 HSPs)
scaffold0361 (157-210)||(17415-17468)
[»] scaffold0119 (1 HSPs)
scaffold0119 (18-85)||(16191-16258)
[»] scaffold0514 (1 HSPs)
scaffold0514 (150-206)||(4378-4434)
[»] scaffold0224 (1 HSPs)
scaffold0224 (28-104)||(18358-18433)
[»] scaffold0013 (1 HSPs)
scaffold0013 (165-213)||(52663-52711)


Alignment Details
Target: chr8 (Bit Score: 163; Significance: 4e-87; HSPs: 37)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 163; E-Value: 4e-87
Query Start/End: Original strand, 18 - 220
Target Start/End: Complemental strand, 8882451 - 8882250
Alignment:
Q  18 aaaacctgcgtcaagcaaagtggcccaacatgagaaagtgtgttctgacaatcaacatgcttttataccatttgtttttgacactttcagttttctagca 117  Q
    ||||||||||||||||||||||||| |||||||||||| |||||||||||||||| ||||||||| ||||||||||||||| ||||||||||||||||||    
T  8882451 aaaacctgcgtcaagcaaagtggccaaacatgagaaagcgtgttctgacaatcaatatgcttttaaaccatttgtttttga-actttcagttttctagca 8882353  T
Q  118 ccagaggttgttgaacattcacatagagttcaaatgtcatgtctcctaggtccatgaatgttgtgtttacgatgattagttttgccatccaaaaaggttt 217  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||| ||||| ||||    
T  8882352 ccagaggttgttgaacattcacatagagttcaaatgtcatgtctcctaggtccatgaatgttgtgtttacgaggattaattttgccatcaaaaaatgttt 8882253  T
Q  218 aac 220  Q
    |||    
T  8882252 aac 8882250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 33 - 214
Target Start/End: Complemental strand, 38815403 - 38815206
Alignment:
Q  33 caaagtggcccaacatgagaaagtgtgttctgacaatcaacatgcttttataccatttgtttttgacactttcagttttctagcaccagaggttgttgaa 132  Q
    |||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||| | || ||||||||||||| ||||||     
T  38815403 caaagtggccaaacatgagaaagcgtgttctgacaatcaacatgcttttataccatttgcttttgacactttccgcttcctagcaccagagggtgttgac 38815304  T
Q  133 cattcacatagagttca----------------aatgtcatgtctcctaggtccatgaatgttgtgtttacgatgattagttttgccatccaaaaagg 214  Q
    | |  ||||||||||||                |||||||||||||||||||||||||||||||||||||||| |||| ||||| |||||||||||||    
T  38815303 cttctacatagagttcaaagggtcatgcatagcaatgtcatgtctcctaggtccatgaatgttgtgtttacgaggattggtttttccatccaaaaagg 38815206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 18 - 215
Target Start/End: Complemental strand, 6592699 - 6592487
Alignment:
Q  18 aaaacctgcgtcaagcaaagtggcccaacatgagaaagtgtgttctgacaatcaacatgcttttataccatttgtttttgacactttcagttttctagca 117  Q
    |||| |||||||||||||||||||| |||||||||||| ||||||| |||||||||||| ||||| |||||||| |||||||||||||||||| |||||     
T  6592699 aaaagctgcgtcaagcaaagtggccaaacatgagaaagcgtgttctcacaatcaacatgattttaaaccatttgcttttgacactttcagtttcctagct 6592600  T
Q  118 ccagaggttgttgaacattcacatagagttca---------------aatgtcatgtctcctaggtccatgaatgttgtgtttacgatgattagttttgc 202  Q
    |||||||||||||| | |   |||||||||||               ||||||||||||| ||||| ||||||||||||||||||||  ||| ||||||     
T  6592599 ccagaggttgttgaccttctgcatagagttcaaaaggtcatgcatataatgtcatgtctcataggttcatgaatgttgtgtttacgagtattggttttgt 6592500  T
Q  203 catccaaaaaggt 215  Q
    |||||| ||||||    
T  6592499 catccagaaaggt 6592487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 24 - 104
Target Start/End: Complemental strand, 39434785 - 39434705
Alignment:
Q  24 tgcgtcaagcaaagtggcccaacatgagaaagtgtgttctgacaatcaacatgcttttataccatttgtttttgacacttt 104  Q
    ||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  39434785 tgcgtcaagcaaagtggccaaacatgagaaagcgtgttctgacaatcaacatgcttttataccatttgtttttgacacttt 39434705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 28 - 220
Target Start/End: Complemental strand, 3188083 - 3187876
Alignment:
Q  28 tcaagcaaagtggcccaacatgagaaagtgtgttctgacaatcaacatgcttttataccatttgtttttgacactttcagttttctagcaccagaggttg 127  Q
    ||||||||||||||  |||||||| ||| ||||||||||||||||||||||||||||||||||| |||||| |||||| | || |||||| |||||||||    
T  3188083 tcaagcaaagtggcaaaacatgaggaagcgtgttctgacaatcaacatgcttttataccatttgcttttgaaactttcggcttcctagcatcagaggttg 3187984  T
Q  128 ttgaacattc-acatagagttca---------------aatgtcatgtctcctaggtccatgaatgttgtgtttacgatgattagttttgccatccaaaa 211  Q
    || ||| ||| |||||||||  |               ||||| ||||||||||||||||||||||||||||||||||  ||| ||||||||||||||||    
T  3187983 tt-aaccttctacatagagtcaaagggttatgcatagcaatgttatgtctcctaggtccatgaatgttgtgtttacgagaattggttttgccatccaaaa 3187885  T
Q  212 aggtttaac 220  Q
    |||| ||||    
T  3187884 aggtctaac 3187876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 30 - 151
Target Start/End: Original strand, 35739981 - 35740102
Alignment:
Q  30 aagcaaagtggcccaacatgagaaagtgtgttctgacaatcaacatgcttttataccatttgtttttgacactttcagttttctagcaccagaggttgtt 129  Q
    ||||||||||||| |||||||||||| | |||||||||||||||||| |||||||| ||| | |||||||||||||||||| |||||||||||| |||||    
T  35739981 aagcaaagtggccaaacatgagaaagcgggttctgacaatcaacatgtttttatacaattagcttttgacactttcagtttcctagcaccagagattgtt 35740080  T
Q  130 gaacattcacatagagttcaaa 151  Q
    || | |  ||||||||||||||    
T  35740081 gaccttctacatagagttcaaa 35740102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 18 - 207
Target Start/End: Complemental strand, 24125152 - 24124947
Alignment:
Q  18 aaaacctgcgtcaagcaaagtggcccaacatgagaaagtgtgttctgacaatcaacatgcttttataccatttgtttttgacactttcagttttctagca 117  Q
    |||| |||| ||||||||| ||||| |||||||||||| ||| ||||||||||||||||||||||||||||||| |||||||| |||   ||| ||||||    
T  24125152 aaaagctgcatcaagcaaaatggccaaacatgagaaagcgtgctctgacaatcaacatgcttttataccatttgcttttgacaattttgatttcctagca 24125053  T
Q  118 ccagaggttgttgaacattcacatagagttca----------------aatgtcatgtctcctaggtccatgaatgttgtgtttacgatgattagttttg 201  Q
    |||||||||||||  | |  ||||| ||||||                ||||||||||||| |||||||||||||||||||||||| | |||||||||||    
T  24125052 ccagaggttgttggccttctacataaagttcaaaaggtcatgcatagcaatgtcatgtctcataggtccatgaatgttgtgtttacaaggattagttttg 24124953  T
Q  202 ccatcc 207  Q
    ||||||    
T  24124952 ccatcc 24124947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 24 - 227
Target Start/End: Complemental strand, 500345 - 500141
Alignment:
Q  24 tgcgtcaagcaaagtggcccaacatgagaaagtgtgttctgacaatcaacatgcttttataccatttgtttttgacactttcagttttctagcaccagag 123  Q
    ||||||||||||||||||| |||||||||||  ||||||||||||||||||||||||||||||||||  |||||||| |||| |||| |||| |  ||||    
T  500345 tgcgtcaagcaaagtggccaaacatgagaaaacgtgttctgacaatcaacatgcttttataccatttacttttgacattttcggtttcctagtatgagag 500246  T
Q  124 gttgttgaacattcacatagagttc-aaatgtcatgtct-cctaggtccatgaatgttgtgtttacgatgattagttttgccatccaaaaaggtttaact 221  Q
    | |||||  | |  ||||||||||| ||| ||||||  |  | | ||||||||||||||||||||||| ||||  |||| |||| |||||||| || ||     
T  500245 g-tgttggccttctacatagagttcaaaaggtcatgcatatcaatgtccatgaatgttgtgtttacgaggattgattttaccattcaaaaaggcttgacg 500147  T
Q  222 gcacag 227  Q
    ||||||    
T  500146 gcacag 500141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 44 - 227
Target Start/End: Complemental strand, 6618382 - 6618184
Alignment:
Q  44 aacatgagaaagtgtgttctgacaatcaacatgcttttataccatttgtttttgacactttcagttttctagcaccagaggttgttgaacattcacatag 143  Q
    |||||||||||| ||||||| |||||||||||| ||||| |||||||| |||||||||||||||||| ||||| |||||| ||||||| | ||  |||||    
T  6618382 aacatgagaaagcgtgttctcacaatcaacatgattttaaaccatttgcttttgacactttcagtttcctagctccagagattgttgaccttttgcatag 6618283  T
Q  144 agttca---------------aatgtcatgtctcctaggtccatgaatgttgtgtttacgatgattagttttgccatccaaaaaggtttaactgcacag 227  Q
     |||||               ||||||||||||| |||||||||||||||| |||||||||  ||| |||||| ||||||||||| | |||| ||||||    
T  6618282 cgttcaaaaggtcatgcatataatgtcatgtctcataggtccatgaatgttatgtttacgagtattggttttgtcatccaaaaagatctaacggcacag 6618184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 27 - 151
Target Start/End: Original strand, 25021806 - 25021930
Alignment:
Q  27 gtcaagcaaagtggcccaacatgagaaagtgtgttctgacaatcaacatgcttttataccatttgtttttgacactttcagttttctagcaccagaggtt 126  Q
    ||||||||||||||   || ||||||||||||||||| |||||||||||| |||||||||||||  |||||||| |||  | || |||||||||||||||    
T  25021806 gtcaagcaaagtggtgaaatatgagaaagtgtgttctcacaatcaacatgtttttataccattttcttttgacatttttggcttcctagcaccagaggtt 25021905  T
Q  127 gttgaacattcacatagagttcaaa 151  Q
    ||||| ||| |||| | ||||||||    
T  25021906 gttgaccatccacacaaagttcaaa 25021930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 18 - 151
Target Start/End: Complemental strand, 28196316 - 28196183
Alignment:
Q  18 aaaacctgcgtcaagcaaagtggcccaacatgagaaagtgtgttctgacaatcaacatgcttttataccatttgtttttgacactttcagttttctagca 117  Q
    |||| |||| ||||| |||| |||  |||||||||||||||||| ||| ||| |||||| |||||||||||||||||||||||||||    || ||||||    
T  28196316 aaaaactgcatcaagtaaagcggctaaacatgagaaagtgtgttatgataataaacatgtttttataccatttgtttttgacacttttgtcttcctagca 28196217  T
Q  118 ccagaggttgttgaacattcacatagagttcaaa 151  Q
    ||| |||||||||| |||  || |||||||||||    
T  28196216 ccataggttgttgaccatctacgtagagttcaaa 28196183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 150 - 211
Target Start/End: Complemental strand, 24451096 - 24451036
Alignment:
Q  150 aatgtcatgtctcctaggtccatgaatgttgtgtttacgatgattagttttgccatccaaaa 211  Q
    ||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||    
T  24451096 aatgtcatgtctcctaggtccatgaatgttgtgttcacgatgatt-gttttgccatccaaaa 24451036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 24 - 131
Target Start/End: Complemental strand, 8619932 - 8619825
Alignment:
Q  24 tgcgtcaagcaaagtggcccaacatgagaaagtgtgttctgacaatcaacatgcttttataccatttgtttttgacactttcagttttctagcaccagag 123  Q
    ||||||||| ||| ||| | ||||||| |||| || || ||||||||||| |||||||||||||||||||||| ||| |||  | |||||| ||||||||    
T  8619932 tgcgtcaagtaaaatggtcaaacatgaaaaagcgtattttgacaatcaacgtgcttttataccatttgtttttaacatttttggctttctaacaccagag 8619833  T
Q  124 gttgttga 131  Q
    ||||||||    
T  8619832 gttgttga 8619825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 156 - 214
Target Start/End: Complemental strand, 4699841 - 4699783
Alignment:
Q  156 atgtctcctaggtccatgaatgttgtgtttacgatgattagttttgccatccaaaaagg 214  Q
    ||||| |||||||||||||||||||||||||| | ||||||||||||||||||||||||    
T  4699841 atgtcacctaggtccatgaatgttgtgtttacaaggattagttttgccatccaaaaagg 4699783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 150 - 215
Target Start/End: Original strand, 22589467 - 22589532
Alignment:
Q  150 aatgtcatgtctcctaggtccatgaatgttgtgtttacgatgattagttttgccatccaaaaaggt 215  Q
    ||||||||||||| |||||| |||||||||||||| |||| |||| ||||||||||||||||||||    
T  22589467 aatgtcatgtctcataggtctatgaatgttgtgttcacgaggattggttttgccatccaaaaaggt 22589532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 65 - 151
Target Start/End: Complemental strand, 37514298 - 37514212
Alignment:
Q  65 acaatcaacatgcttttataccatttgtttttgacactttcagttttctagcaccagaggttgttgaacattcacatagagttcaaa 151  Q
    ||||||||||||| ||||||| ||||| |||||||||||||| ||| ||||| ||||||| |||||| | |  ||||||||||||||    
T  37514298 acaatcaacatgcgtttatactatttgcttttgacactttcaatttcctagcgccagaggctgttgaccttctacatagagttcaaa 37514212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 156 - 220
Target Start/End: Complemental strand, 42659197 - 42659133
Alignment:
Q  156 atgtctcctaggtccatgaatgttgtgtttacgatgattagttttgccatccaaaaaggtttaac 220  Q
    |||||| |||||| |||||||||||||||||||| ||||| ||||| ||||||||||||| ||||    
T  42659197 atgtcttctaggttcatgaatgttgtgtttacgaggattaattttgtcatccaaaaaggtctaac 42659133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 150 - 213
Target Start/End: Complemental strand, 4066821 - 4066758
Alignment:
Q  150 aatgtcatgtctcctaggtccatgaatgttgtgtttacgatgattagttttgccatccaaaaag 213  Q
    ||||| |||| |||||||||||||| ||||||||| ||||||||| ||||| ||||||||||||    
T  4066821 aatgtaatgtgtcctaggtccatgactgttgtgttcacgatgattggttttaccatccaaaaag 4066758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 156 - 215
Target Start/End: Complemental strand, 39434637 - 39434578
Alignment:
Q  156 atgtctcctaggtccatgaatgttgtgtttacgatgattagttttgccatccaaaaaggt 215  Q
    ||||||| ||| |||||||||||||||||||||| ||||  |||||||||||||||||||    
T  39434637 atgtctcttagatccatgaatgttgtgtttacgaggattgattttgccatccaaaaaggt 39434578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 73
Target Start/End: Complemental strand, 37517218 - 37517163
Alignment:
Q  18 aaaacctgcgtcaagcaaagtggcccaacatgagaaagtgtgttctgacaatcaac 73  Q
    |||| |||| ||||||||||||||| |||||||||||| |||||| ||||||||||    
T  37517218 aaaagctgcatcaagcaaagtggccaaacatgagaaagggtgttccgacaatcaac 37517163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 150 - 212
Target Start/End: Original strand, 25021945 - 25022007
Alignment:
Q  150 aatgtcatgtctcctaggtccatgaatgttgtgtttacgatgattagttttgccatccaaaaa 212  Q
    |||||||| ||||||||||||| ||||||||||||||| ||||||  ||||  ||||||||||    
T  25021945 aatgtcatatctcctaggtccaggaatgttgtgtttacaatgattgattttatcatccaaaaa 25022007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 150 - 215
Target Start/End: Complemental strand, 18804588 - 18804524
Alignment:
Q  150 aatgtcatgtctcctaggtccatgaatgttgtgtttacgatgattagttttgccatccaaaaaggt 215  Q
    ||||||||| ||||||||| || || |||| ||||||||| |||| ||||||||||||||||||||    
T  18804588 aatgtcatgactcctaggttca-gagtgttttgtttacgaggattggttttgccatccaaaaaggt 18804524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 75
Target Start/End: Original strand, 22589337 - 22589394
Alignment:
Q  18 aaaacctgcgtcaagcaaagtggcccaacatgagaaagtgtgttctgacaatcaacat 75  Q
    |||| |||||||||||||| ||||  |||||||||||| |||||||||||| ||||||    
T  22589337 aaaagctgcgtcaagcaaaatggctgaacatgagaaagcgtgttctgacaaccaacat 22589394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 154 - 214
Target Start/End: Original strand, 5329737 - 5329797
Alignment:
Q  154 tcatgtctcctaggtccatgaatgttgtgtttacgatgattagttttgccatccaaaaagg 214  Q
    |||||||||||| ||| || ||||||||||||| || ||||| ||||| ||||||||||||    
T  5329737 tcatgtctcctatgtctatcaatgttgtgtttatgaggattaattttgacatccaaaaagg 5329797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 34 - 129
Target Start/End: Original strand, 39671170 - 39671266
Alignment:
Q  34 aaagtggcccaacatgagaaagtgtgttctgacaatcaacatgcttttataccatttgtttttg-acactttcagttttctagcaccagaggttgtt 129  Q
    ||||||||| |||  ||||||| ||||| ||||||| |||||| |||||||| |||| |||||  ||| |||| | || ||||||||||||||||||    
T  39671170 aaagtggccaaaccagagaaagcgtgttttgacaattaacatgtttttatacaatttatttttttacattttcggcttcctagcaccagaggttgtt 39671266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 44 - 131
Target Start/End: Complemental strand, 6121063 - 6120976
Alignment:
Q  44 aacatgagaaagtgtgt--tctgacaatcaacatgcttttataccatttgtttttgacactttcagttttctagcaccagaggttgttga 131  Q
    |||||||||||||||||  ||| |||||||||||| ||||||| ||  ||| |||||||||||  ||||||||| |||| |||| |||||    
T  6121063 aacatgagaaagtgtgtattctcacaatcaacatgtttttatagca--tgtgtttgacacttttggttttctagtaccaaaggtcgttga 6120976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 44 - 131
Target Start/End: Original strand, 8540386 - 8540473
Alignment:
Q  44 aacatgagaaagtgtgttctgacaatcaacatgcttttataccatttgtttttgacactttcagttttctagcaccagaggttgttga 131  Q
    ||||| ||||| |||||||| |||||| ||||| ||||||  ||| ||  |||||||||||||  |||||| || |||||||||||||    
T  8540386 aacattagaaaatgtgttctaacaatcgacatgtttttatgtcatctgcatttgacactttcaactttctaacatcagaggttgttga 8540473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 92 - 151
Target Start/End: Original strand, 22589394 - 22589452
Alignment:
Q  92 tttttgacactttcagttttctagcaccagaggttgttgaacattcacatagagttcaaa 151  Q
    |||||||||||||| |||| ||||||||||||| ||||| || || ||||||||||||||    
T  22589394 tttttgacactttcggtttcctagcaccagaggctgttg-acttttacatagagttcaaa 22589452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 150 - 212
Target Start/End: Original strand, 9259423 - 9259485
Alignment:
Q  150 aatgtcatgtctcctaggtccatgaatgttgtgtttacgatgattagttttgccatccaaaaa 212  Q
    |||||||| | ||||| ||||||||||||||| ||||||| ||||  ||||| ||||||||||    
T  9259423 aatgtcatatatcctaagtccatgaatgttgtatttacgaagattgattttgtcatccaaaaa 9259485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 48 - 117
Target Start/End: Complemental strand, 12320275 - 12320206
Alignment:
Q  48 tgagaaagtgtgttctgacaatcaacatgcttttataccatttgtttttgacactttcagttttctagca 117  Q
    |||||||  |||||| |||||||||||| ||||| |||||||| ||||||| | |||||| || ||||||    
T  12320275 tgagaaatcgtgttccgacaatcaacatacttttgtaccatttatttttgatattttcagcttcctagca 12320206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 34 - 131
Target Start/End: Complemental strand, 36004230 - 36004133
Alignment:
Q  34 aaagtggcccaacatgagaaagtgtgttctgacaatcaacatgcttttataccatttgtttttgacactttcagttttctagcaccagaggttgttga 131  Q
    ||||||||  || |||| |||||| ||| |||||||||||||| |||||||||||||   ||||||| |||    || ||| ||||||||||||||||    
T  36004230 aaagtggctaaatatgacaaagtgcgttatgacaatcaacatgtttttataccatttacatttgacatttttgacttcctatcaccagaggttgttga 36004133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 194
Target Start/End: Complemental strand, 3821200 - 3821156
Alignment:
Q  150 aatgtcatgtctcctaggtccatgaatgttgtgtttacgatgatt 194  Q
    ||||||||||||||||||| ||| |||||| ||||||||| ||||    
T  3821200 aatgtcatgtctcctaggttcataaatgttatgtttacgaggatt 3821156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 153 - 205
Target Start/End: Complemental strand, 3825608 - 3825556
Alignment:
Q  153 gtcatgtctcctaggtccatgaatgttgtgtttacgatgattagttttgccat 205  Q
    ||||||| || ||| ||||||||| |||||||||||||||||| | |||||||    
T  3825608 gtcatgtttcatagatccatgaatattgtgtttacgatgattaatattgccat 3825556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 131
Target Start/End: Complemental strand, 4699983 - 4699881
Alignment:
Q  27 gtcaagcaaagtggcccaacatgagaaagtgtgttctgacaatcaacatgcttttataccatttgtttttgacactttcagttttctagcaccagaggtt 126  Q
    |||||||||||||||| |||||||  ||| ||||||| ||||| |||||| ||||| |||||||| | || |||||||  | ||  |||||||||||| |    
T  4699983 gtcaagcaaagtggccaaacatga-taagcgtgttctcacaattaacatgtttttacaccatttg-tgttaacacttttggcttcatagcaccagaggct 4699886  T
Q  127 gttga 131  Q
    |||||    
T  4699885 gttga 4699881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 206
Target Start/End: Complemental strand, 6792245 - 6792189
Alignment:
Q  150 aatgtcatgtctcctaggtccatgaatgttgtgtttacgatgattagttttgccatc 206  Q
    ||||||||||||| || |||||| ||||||||||||||||  ||| |||||| ||||    
T  6792245 aatgtcatgtctcataagtccataaatgttgtgtttacgaatattggttttgtcatc 6792189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 168 - 212
Target Start/End: Original strand, 8227984 - 8228028
Alignment:
Q  168 tccatgaatgttgtgtttacgatgattagttttgccatccaaaaa 212  Q
    |||||||||||||||||||||| || | ||||||| |||||||||    
T  8227984 tccatgaatgttgtgtttacgaggaatggttttgctatccaaaaa 8228028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 44 - 100
Target Start/End: Complemental strand, 10189641 - 10189585
Alignment:
Q  44 aacatgagaaagtgtgttctgacaatcaacatgcttttataccatttgtttttgaca 100  Q
    |||| |||||||  ||||||||||||||||||| ||||||| ||||||  |||||||    
T  10189641 aacaagagaaagcatgttctgacaatcaacatgtttttatatcatttgcatttgaca 10189585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 95; Significance: 1e-46; HSPs: 52)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 25 - 220
Target Start/End: Original strand, 21326828 - 21327039
Alignment:
Q  25 gcgtcaagcaaagtggcccaacatgagaaagtgtgttctgacaatcaacatgcttttataccatttgtttttgacactttcagttttctagcaccagagg 124  Q
    |||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||  ||| |||||||||||||    
T  21326828 gcgtcaagcaaagtggccaaacatgagaaagcgtgttctgacaatcaacatgcttttataccatttgcttttgacactttcgatttcctagcaccagagg 21326927  T
Q  125 ttgttgaacattcacatagagttca----------------aatgtcatgtctcctaggtccatgaatgttgtgtttacgatgattagttttgccatcca 208  Q
     |||||| | || ||||||||||||                ||||| ||||||||||||||||||||||||||||| |||| ||||  ||||||||||||    
T  21326928 ctgttgaccttttacatagagttcaaaaggtcatgcatagcaatgttatgtctcctaggtccatgaatgttgtgttcacgaggattgattttgccatcca 21327027  T
Q  209 aaaaggtttaac 220  Q
    ||||||| ||||    
T  21327028 aaaaggtctaac 21327039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 18 - 215
Target Start/End: Complemental strand, 19277417 - 19277202
Alignment:
Q  18 aaaacctgcgtcaagcaaagtggcccaacatgagaaagtgtgttctgacaatcaacatgcttttataccatttgtttttgacactttcagttttctagca 117  Q
    |||| |||||||||||||||| ||| |||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||| |||| ||||||    
T  19277417 aaaagctgcgtcaagcaaagtagccaaacatgagaaagcgtgttctgacaatcaacatgcttttataccatttgcttttgacactttcggtttcctagca 19277318  T
Q  118 ccagaggttgttgaacattcacatagagttca----------------aatgtcatgtctcctaggtccatgaatgttgtgtt--tacgatgattagttt 199  Q
    |||||||||||||| | |  ||||||||||||                |||||||||||||||||||||||||||||||||||   ||||  ||| ||||    
T  19277317 ccagaggttgttgaccttctacatagagttcaaaaggtcatgcatagcaatgtcatgtctcctaggtccatgaatgttgtgttcacacgaaaattggttt 19277218  T
Q  200 tgccatccaaaaaggt 215  Q
    ||||||||||||||||    
T  19277217 tgccatccaaaaaggt 19277202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 18 - 215
Target Start/End: Complemental strand, 983073 - 982860
Alignment:
Q  18 aaaacctgcgtcaagcaaagtggcccaacatgagaaagtgtgttctgacaatcaacatgcttttataccatttgtttttgacactttcagttttctagca 117  Q
    |||| |||||||||||||||||||| |||||||||||  ||||||||||||||||||||||||||||||||||| |||||| |||||| |||||||||||    
T  983073 aaaagctgcgtcaagcaaagtggccaaacatgagaaatcgtgttctgacaatcaacatgcttttataccatttgcttttgatactttcggttttctagca 982974  T
Q  118 ccagaggttgttgaacattcacatagagttca----------------aatgtcatgtctcctaggtccatgaatgttgtgtttacgatgattagttttg 201  Q
    |||||||||||||  | |  ||||||||||||                |||||||||||| ||| |||||||||||||||||| |||| |||| || |||    
T  982973 ccagaggttgttggccttctacatagagttcaaaaggtcatgcatatcaatgtcatgtcttctatgtccatgaatgttgtgttcacgaggattggtattg 982874  T
Q  202 ccatccaaaaaggt 215  Q
    ||||||||||||||    
T  982873 ccatccaaaaaggt 982860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 18 - 215
Target Start/End: Complemental strand, 4501382 - 4501170
Alignment:
Q  18 aaaacctgcgtcaagcaaagtggcccaacatgagaaagtgtgttctgacaatcaacatgcttttataccatttgtttttgacactttcagttttctagca 117  Q
    |||| ||||||||| |||||||||| |||||||||||| ||||||||||||||||||||||||||||  ||||| ||||||||||||  |||||||||||    
T  4501382 aaaagctgcgtcaaacaaagtggccaaacatgagaaagcgtgttctgacaatcaacatgcttttatataatttgcttttgacacttt-ggttttctagca 4501284  T
Q  118 ccagaggttgttgaacattcacatagagttca----------------aatgtcatgtctcctaggtccatgaatgttgtgtttacgatgattagttttg 201  Q
    |||||||||||||| | |  ||||||||||||                ||||||||||||||||| | |||||||||||||||||||| |||||| ||||    
T  4501283 ccagaggttgttgaccttctacatagagttcaaaagttcatgcatagcaatgtcatgtctcctagattcatgaatgttgtgtttacgaggattagctttg 4501184  T
Q  202 ccatccaaaaaggt 215  Q
     |||| ||||||||    
T  4501183 tcatctaaaaaggt 4501170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 25 - 214
Target Start/End: Complemental strand, 22198103 - 22197899
Alignment:
Q  25 gcgtcaagcaaagtggcccaacatgagaaagtgtgttctgacaatcaacatgcttttataccatttgtttttgacactttcagttttctagcaccagagg 124  Q
    ||||||||||||||| || |||||||||||||||||||  |||||||||||| |||||||||||||| ||||| ||||||| |||| |||||| ||||||    
T  22198103 gcgtcaagcaaagtgaccaaacatgagaaagtgtgttccaacaatcaacatgtttttataccatttgcttttgtcactttcggtttcctagcatcagagg 22198004  T
Q  125 ttgttgaacattcacatagagttca---------------aatgtcatgtctcctaggtccatgaatgttgtgtttacgatgattagttttgccatccaa 209  Q
    ||||||| | |  ||||||||||||               || ||||||||||||||||| |||||||||||||||||||| |||  ||||| |||||||    
T  22198003 ttgttgaccttctacatagagttcaaaaggttatgatagcaacgtcatgtctcctaggtcaatgaatgttgtgtttacgataattgattttgtcatccaa 22197904  T
Q  210 aaagg 214  Q
    |||||    
T  22197903 aaagg 22197899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 25 - 214
Target Start/End: Original strand, 22239718 - 22239922
Alignment:
Q  25 gcgtcaagcaaagtggcccaacatgagaaagtgtgttctgacaatcaacatgcttttataccatttgtttttgacactttcagttttctagcaccagagg 124  Q
    ||||||||||||||| || |||||||||||||||||||  |||||||||||| |||||||||||||| ||||| ||||||| |||| |||||| ||||||    
T  22239718 gcgtcaagcaaagtgaccaaacatgagaaagtgtgttccaacaatcaacatgtttttataccatttgcttttgtcactttcggtttcctagcatcagagg 22239817  T
Q  125 ttgttgaacattcacatagagttca---------------aatgtcatgtctcctaggtccatgaatgttgtgtttacgatgattagttttgccatccaa 209  Q
    ||||||| | |  ||||||||||||               || ||||||||||||||||| |||||||||||||||||||| |||  ||||| |||||||    
T  22239818 ttgttgaccttctacatagagttcaaaaggttatgatagcaacgtcatgtctcctaggtcaatgaatgttgtgtttacgataattgattttgtcatccaa 22239917  T
Q  210 aaagg 214  Q
    |||||    
T  22239918 aaagg 22239922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 62 - 213
Target Start/End: Complemental strand, 48539261 - 48539094
Alignment:
Q  62 ctgacaatcaacatgcttttataccatttgtttttgacactttcagttttctagcaccagaggttgttgaacattcacatagagttca------------ 149  Q
    |||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||| |||||| | |  ||||||||| ||                
T  48539261 ctgacaatcaacatgcttttataccatttgcttttgacactttcggttttctagcaccagaggctgttgatcgtctacatagagtccaaaaggtcatgca 48539162  T
Q  150 ----aatgtcatgtctcctaggtccatgaatgttgtgtttacgatgattagttttgccatccaaaaag 213  Q
        |||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||    
T  48539161 tagcaatgtcatgtctcctaggtccatgaatgttgtgtttacgaggattggttttgccatccaaaaag 48539094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 18 - 153
Target Start/End: Original strand, 30216041 - 30216176
Alignment:
Q  18 aaaacctgcgtcaagcaaagtggcccaacatgagaaagtgtgttctgacaatcaacatgcttttataccatttgtttttgacactttcagttttctagca 117  Q
    |||| |||||||||||||| ||| | || ||||||||| ||||| |||||||||||||| |||||||||||||| ||||||||||||| |||| ||||||    
T  30216041 aaaagctgcgtcaagcaaaatggtcaaatatgagaaagcgtgttttgacaatcaacatgtttttataccatttgcttttgacactttcggtttcctagca 30216140  T
Q  118 ccagaggttgttgaacattcacatagagttcaaatg 153  Q
     ||||| ||||||| | | |||||| ||||||||||    
T  30216141 tcagagtttgttgatcttccacataaagttcaaatg 30216176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 25 - 213
Target Start/End: Original strand, 42295174 - 42295378
Alignment:
Q  25 gcgtcaagcaaagtggcccaacatgagaaagtgtgttctgacaatcaacatgcttttataccatttgtttttgacactttcagttttctagcaccagagg 124  Q
    |||||||||||| ||||| ||||| ||||||  | ||||||||||||||||| ||||||||||||||||||| | |||||| |||| ||| |||||| ||    
T  42295174 gcgtcaagcaaaatggccaaacataagaaagcttcttctgacaatcaacatgtttttataccatttgttttttatactttcggtttcctaacaccagggg 42295273  T
Q  125 ttgttgaacattcacatagagttcaaa----------------tgtcatgtctcctaggtccatgaatgttgtgtttacgatgattagttttgccatcca 208  Q
    ||||||| | |  |||||| |||||||                ||||||||||||||||||||||||| ||||||||||||||||||||||||  |||||    
T  42295274 ttgttgaccttctacatagcgttcaaaatatcatgcataacattgtcatgtctcctaggtccatgaatcttgtgtttacgatgattagttttgttatcca 42295373  T
Q  209 aaaag 213  Q
    |||||    
T  42295374 aaaag 42295378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 27 - 151
Target Start/End: Complemental strand, 24527704 - 24527580
Alignment:
Q  27 gtcaagcaaagtggcccaacatgagaaagtgtgttctgacaatcaacatgcttttataccatttgtttttgacactttcagttttctagcaccagaggtt 126  Q
    |||||| |||||||   |||||||||||  ||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||| |||||      
T  24527704 gtcaagtaaagtgggaaaacatgagaaaacgtgttctgacaatcaacatgcttttataccatttgcttttgacactttcagtttcctagcacgagaggcg 24527605  T
Q  127 gttgaacattcacatagagttcaaa 151  Q
    ||||| | |  ||||||||||||||    
T  24527604 gttgaccttctacatagagttcaaa 24527580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 26 - 216
Target Start/End: Complemental strand, 2904481 - 2904290
Alignment:
Q  26 cgtcaagcaaagtggcccaacatgagaaagtgtgttctgacaatcaacatgcttttataccatttgtttttgacactttcagttttctagcaccagaggt 125  Q
    ||||||||||| | | | ||||||||||||  ||||| ||||||||||||| ||||||| ||||||||| |||||  ||  | || ||||||| ||||||    
T  2904481 cgtcaagcaaaatagtcaaacatgagaaagcatgttccgacaatcaacatgattttatatcatttgtttgtgacatgtttggcttcctagcactagaggt 2904382  T
Q  126 tgttgaacattcacatagagttcaaatg-tcatgtctcctaggtccatgaatgttgtgtttacgatgattagttttgccatccaaaaaggtt 216  Q
    |||||| | |  || || |||| ||| | ||||| |||||||||| |||||||||||||||||||| ||| ||||||| |||||||||||||    
T  2904381 tgttgaccttctacgtaaagtttaaagggtcatgactcctaggtctatgaatgttgtgtttacgataattggttttgctatccaaaaaggtt 2904290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 24 - 215
Target Start/End: Original strand, 45613831 - 45614038
Alignment:
Q  24 tgcgtcaagcaaagtggcccaacatgagaaagtgtgttctgacaatcaacatgcttttataccatttgtttttgacactttcagttttctagcaccagag 123  Q
    ||||||||| || ||| || |||| | |||||||||||||||||||||||||| |||||||||||||| ||||||||||||| |||| | ||||||||||    
T  45613831 tgcgtcaagtaaggtgaccaaacacgggaaagtgtgttctgacaatcaacatgtttttataccatttgattttgacactttcggtttccaagcaccagag 45613930  T
Q  124 gttgttgaacattc-acatagagttca----------------aatgtcatgtctcctaggtccatgaatgttgtgtttacgatgattagttttgccatc 206  Q
    | |||| | | ||| ||||||||||||                |||||||  ||||||||||||||||||||||||||||||| |||| |||||||||||    
T  45613931 gctgtt-agccttctacatagagttcaaaagttcatgcataacaatgtcaaatctcctaggtccatgaatgttgtgtttacgaggattggttttgccatc 45614029  T
Q  207 caaaaaggt 215  Q
    | |||||||    
T  45614030 cgaaaaggt 45614038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 31 - 131
Target Start/End: Original strand, 40726476 - 40726576
Alignment:
Q  31 agcaaagtggcccaacatgagaaagtgtgttctgacaatcaacatgcttttataccatttgtttttgacactttcagttttctagcaccagaggttgttg 130  Q
    |||||||||||| ||||| | ||| ||||||||||||||||||||| |||||||||||||||||||||||||||| | ||  ||||| ||||||||||||    
T  40726476 agcaaagtggccaaacataataaaatgtgttctgacaatcaacatgtttttataccatttgtttttgacactttcggcttcatagcatcagaggttgttg 40726575  T
Q  131 a 131  Q
    |    
T  40726576 a 40726576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 28 - 131
Target Start/End: Complemental strand, 32584715 - 32584612
Alignment:
Q  28 tcaagcaaagtggcccaacatgagaaagtgtgttctgacaatcaacatgcttttataccatttgtttttgacactttcagttttctagcaccagaggttg 127  Q
    |||| |||||||| | |||||||||||  |||||||||||||||| ||||||||| |||||||| ||||||||||||  |||| ||||||||||||||||    
T  32584715 tcaaacaaagtggtcaaacatgagaaaacgtgttctgacaatcaagatgcttttacaccatttgcttttgacactttatgtttcctagcaccagaggttg 32584616  T
Q  128 ttga 131  Q
    ||||    
T  32584615 ttga 32584612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 18 - 104
Target Start/End: Original strand, 28517270 - 28517356
Alignment:
Q  18 aaaacctgcgtcaagcaaagtggcccaacatgagaaagtgtgttctgacaatcaacatgcttttataccatttgtttttgacacttt 104  Q
    |||| |||||||||||||||||||| |||||||||||| |||||  ||||||||||||| |||||||||||||| ||||||||||||    
T  28517270 aaaagctgcgtcaagcaaagtggccaaacatgagaaagcgtgtttagacaatcaacatgtttttataccatttgcttttgacacttt 28517356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 18 - 151
Target Start/End: Complemental strand, 10905241 - 10905109
Alignment:
Q  18 aaaacctgcgtcaagcaaagtggcccaacatgagaaagtgtgttctgacaatcaacatgcttttataccatttgtttttgacactttcagttttctagca 117  Q
    |||| |||||||||||||||||||| || ||||||||  ||||||||||| ||||||||| ||||||||||||| ||||||||||||  |||  ||||||    
T  10905241 aaaagctgcgtcaagcaaagtggccaaatatgagaaaaagtgttctgacactcaacatgc-tttataccatttgcttttgacacttttggttgcctagca 10905143  T
Q  118 ccagaggttgttgaacattcacatagagttcaaa 151  Q
    ||||||  |||||| | |  ||||||||||||||    
T  10905142 ccagagtatgttgaccttctacatagagttcaaa 10905109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 24 - 151
Target Start/End: Complemental strand, 27521589 - 27521462
Alignment:
Q  24 tgcgtcaagcaaagtggcccaacatgagaaagtgtgttctgacaatcaacatgcttttataccatttgtttttgacactttcagttttctagcaccagag 123  Q
    ||||| || |||||||| | |||||||||||  ||||||||||||||||||||| ||||||| ||||  ||||||||||||  |||| |||||| |||||    
T  27521589 tgcgttaaacaaagtggtcaaacatgagaaaacgtgttctgacaatcaacatgcatttatacaatttacttttgacacttttggtttcctagcatcagag 27521490  T
Q  124 gttgttgaacattcacatagagttcaaa 151  Q
    |||||||| | |  ||||||||||||||    
T  27521489 gttgttgaccttctacatagagttcaaa 27521462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 24 - 151
Target Start/End: Complemental strand, 43856992 - 43856865
Alignment:
Q  24 tgcgtcaagcaaagtggcccaacatgagaaagtgtgttctgacaatcaacatgcttttataccatttgtttttgacactttcagttttctagcaccagag 123  Q
    |||||||| |||||||||   ||||||||||| ||||| ||||||||||||||| ||||||| ||||| |||||||| |||  |||| ||| ||||||||    
T  43856992 tgcgtcaatcaaagtggctagacatgagaaagcgtgttttgacaatcaacatgcgtttatacaatttgcttttgacatttttggtttcctaacaccagag 43856893  T
Q  124 gttgttgaacattcacatagagttcaaa 151  Q
    |||||||| | |  ||||||||||||||    
T  43856892 gttgttgaccttctacatagagttcaaa 43856865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 18 - 104
Target Start/End: Complemental strand, 3676763 - 3676677
Alignment:
Q  18 aaaacctgcgtcaagcaaagtggcccaacatgagaaagtgtgttctgacaatcaacatgcttttataccatttgtttttgacacttt 104  Q
    |||| |||||||||||||||||| | ||||| |||||| ||||||| || ||||| |||||||||||||||||| ||||||||||||    
T  3676763 aaaagctgcgtcaagcaaagtggtcaaacatcagaaagcgtgttcttactatcaatatgcttttataccatttgcttttgacacttt 3676677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 44 - 151
Target Start/End: Original strand, 9281140 - 9281247
Alignment:
Q  44 aacatgagaaagtgtgttctgacaatcaacatgcttttataccatttgtttttgacactttcagttttctagcaccagaggttgttgaacattcacatag 143  Q
    |||||||||||| ||||||| ||||||||||||||||||||| |||||  ||||||| |||  | || ||||||||||| |||||||| | |  ||||||    
T  9281140 aacatgagaaagcgtgttctaacaatcaacatgcttttatactatttggatttgacattttttgcttcctagcaccagatgttgttgaccttctacatag 9281239  T
Q  144 agttcaaa 151  Q
    ||||||||    
T  9281240 agttcaaa 9281247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 44 - 151
Target Start/End: Original strand, 9292111 - 9292218
Alignment:
Q  44 aacatgagaaagtgtgttctgacaatcaacatgcttttataccatttgtttttgacactttcagttttctagcaccagaggttgttgaacattcacatag 143  Q
    |||||||||||| ||||||| ||||||||||||||||||||| |||||  ||||||| |||  | || ||||||||||| |||||||| | |  ||||||    
T  9292111 aacatgagaaagcgtgttctaacaatcaacatgcttttatactatttggatttgacattttttgcttcctagcaccagatgttgttgaccttctacatag 9292210  T
Q  144 agttcaaa 151  Q
    ||||||||    
T  9292211 agttcaaa 9292218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 150 - 213
Target Start/End: Original strand, 27027761 - 27027824
Alignment:
Q  150 aatgtcatgtctcctaggtccatgaatgttgtgtttacgatgattagttttgccatccaaaaag 213  Q
    ||||||||||||||||||||||||||||||||||| |||| |||| ||||||| ||||||||||    
T  27027761 aatgtcatgtctcctaggtccatgaatgttgtgttcacgaggattggttttgctatccaaaaag 27027824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 18 - 131
Target Start/End: Complemental strand, 5825395 - 5825284
Alignment:
Q  18 aaaacctgcgtcaagcaaagtggcccaacatgagaaagtgtgttctgacaatcaacatgcttttataccatttgtttttgacactttcagttttctagca 117  Q
    |||| |||| ||||||||||||  | ||||||| || | ||||| |||||||||||||| |||||||||||||  ||||||||||||| |  | ||||||    
T  5825395 aaaagctgcatcaagcaaagtg--caaacatgacaatgcgtgttatgacaatcaacatgtttttataccatttacttttgacactttcggcatcctagca 5825298  T
Q  118 ccagaggttgttga 131  Q
    ||||||||||||||    
T  5825297 ccagaggttgttga 5825284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 150 - 212
Target Start/End: Original strand, 28517418 - 28517480
Alignment:
Q  150 aatgtcatgtctcctaggtccatgaatgttgtgtttacgatgattagttttgccatccaaaaa 212  Q
    ||||| |||||||||| ||||||||||||||||||||||| |||| |||||||||||||||||    
T  28517418 aatgttatgtctcctaagtccatgaatgttgtgtttacgaggattggttttgccatccaaaaa 28517480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 80 - 213
Target Start/End: Original strand, 5972261 - 5972410
Alignment:
Q  80 ttataccatttgtttttgacactttcagttttctagcaccagaggttgttgaacattcacatagagttcaaa----------------tgtcatgtctcc 163  Q
    ||||||||||||||||||||| ||||| |||||||| | ||||||||||||| | |  ||||||||||||||                |||||| |||||    
T  5972261 ttataccatttgtttttgacattttcatttttctagtatcagaggttgttgaccttctacatagagttcaaaatgtcatgcatagtaatgtcatttctcc 5972360  T
Q  164 taggtccatgaatgttgtgtttacgatgattagttttgccatccaaaaag 213  Q
     || || ||||||||||||||||||| |||||||||||||||||||||||    
T  5972361 cagatctatgaatgttgtgtttacgaggattagttttgccatccaaaaag 5972410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 150 - 220
Target Start/End: Complemental strand, 34772758 - 34772688
Alignment:
Q  150 aatgtcatgtctcctaggtccatgaatgttgtgtttacgatgattagttttgccatccaaaaaggtttaac 220  Q
    |||||||||| | |||||||||||||| ||||||||||||| ||| |||||||||| |||||| |||||||    
T  34772758 aatgtcatgttttctaggtccatgaatattgtgtttacgataattggttttgccattcaaaaaagtttaac 34772688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 150 - 212
Target Start/End: Original strand, 41117901 - 41117963
Alignment:
Q  150 aatgtcatgtctcctaggtccatgaatgttgtgtttacgatgattagttttgccatccaaaaa 212  Q
    |||||||||| |||||||||||||||||||||||| |||||||||  |||||| |||||||||    
T  41117901 aatgtcatgtttcctaggtccatgaatgttgtgttcacgatgattgattttgctatccaaaaa 41117963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 150 - 215
Target Start/End: Original strand, 45003028 - 45003093
Alignment:
Q  150 aatgtcatgtctcctaggtccatgaatgttgtgtttacgatgattagttttgccatccaaaaaggt 215  Q
    ||||| ||||||| |||| ||||||||||||||||||||| ||||  |||||||||||||||||||    
T  45003028 aatgttatgtctcataggaccatgaatgttgtgtttacgaagattgattttgccatccaaaaaggt 45003093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 28 - 128
Target Start/End: Original strand, 34067855 - 34067954
Alignment:
Q  28 tcaagcaaagtggcccaacatgagaaagtgtgttctgacaatcaacatgcttttataccatttgtttttgacactttcagttttctagcaccagaggttg 127  Q
    |||||| ||||| || |||||||||||||||||| |||||||||||||  || ||| |||||||| |||||||||||  |||| |||| |||| ||||||    
T  34067855 tcaagccaagtgaccaaacatgagaaagtgtgttttgacaatcaacat-tttctatgccatttgtatttgacacttttggtttcctagtaccaaaggttg 34067953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 151 - 215
Target Start/End: Original strand, 45974731 - 45974795
Alignment:
Q  151 atgtcatgtctcctaggtccatgaatgttgtgtttacgatgattagttttgccatccaaaaaggt 215  Q
    |||||||||||||||||| |||||||||||||||||| | ||| | ||||| |||||||||||||    
T  45974731 atgtcatgtctcctaggttcatgaatgttgtgtttacaaggataaattttgtcatccaaaaaggt 45974795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 47 - 131
Target Start/End: Complemental strand, 47679220 - 47679136
Alignment:
Q  47 atgagaaagtgtgttctgacaatcaacatgcttttataccatttgtttttgacactttcagttttctagcaccagaggttgttga 131  Q
    ||||||||||||||||| |||||||| || ||||||||| |||||  ||||||| |||| |||| |||||| || ||||||||||    
T  47679220 atgagaaagtgtgttctcacaatcaatatacttttatactatttgcgtttgacattttcggtttcctagcatcacaggttgttga 47679136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 156 - 215
Target Start/End: Complemental strand, 5825243 - 5825184
Alignment:
Q  156 atgtctcctaggtccatgaatgttgtgtttacgatgattagttttgccatccaaaaaggt 215  Q
    |||||||||||||| ||| ||||||||||||||| |||| ||||||||||| ||||||||    
T  5825243 atgtctcctaggtctatggatgttgtgtttacgaggattggttttgccatcgaaaaaggt 5825184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 28 - 103
Target Start/End: Original strand, 7637505 - 7637579
Alignment:
Q  28 tcaagcaaagtggcccaacatgagaaagtgtgttctgacaatcaacatgcttttataccatttgtttttgacactt 103  Q
    ||||||||||||| | |||||||||||||||| |||||| ||||| | ||||||||||||||||  ||||||||||    
T  7637505 tcaagcaaagtggtc-aacatgagaaagtgtgctctgacgatcaataagcttttataccatttgcgtttgacactt 7637579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 27 - 106
Target Start/End: Complemental strand, 34772896 - 34772817
Alignment:
Q  27 gtcaagcaaagtggcccaacatgagaaagtgtgttctgacaatcaacatgcttttataccatttgtttttgacactttca 106  Q
    ||||| |||||| ||| || |||||||||||||||| |||||| || ||| |||||||||||||| |||||| |||||||    
T  34772896 gtcaatcaaagtagccaaatatgagaaagtgtgttcggacaattaatatgtttttataccatttgcttttgaaactttca 34772817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 150 - 212
Target Start/End: Complemental strand, 27521447 - 27521385
Alignment:
Q  150 aatgtcatgtctcctaggtccatgaatgttgtgtttacgatgattagttttgccatccaaaaa 212  Q
    |||||||||||||||| ||| ||||||||||||||||||| ||||  |||||||||| |||||    
T  27521447 aatgtcatgtctcctaagtctatgaatgttgtgtttacgaggattgattttgccatcgaaaaa 27521385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 156 - 212
Target Start/End: Original strand, 40726617 - 40726673
Alignment:
Q  156 atgtctcctaggtccatgaatgttgtgtttacgatgattagttttgccatccaaaaa 212  Q
    ||||||||||| ||||||||||||||||||| || ||||  ||||||||||||||||    
T  40726617 atgtctcctagatccatgaatgttgtgtttatgaggattgattttgccatccaaaaa 40726673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 150 - 213
Target Start/End: Complemental strand, 24527565 - 24527502
Alignment:
Q  150 aatgtcatgtctcctaggtccatgaatgttgtgtttacgatgattagttttgccatccaaaaag 213  Q
    |||||||| |||||| |||||||||||||||| || |||| |||| |||||| |||||||||||    
T  24527565 aatgtcatttctccttggtccatgaatgttgtattcacgaggattggttttgtcatccaaaaag 24527502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 27 - 98
Target Start/End: Original strand, 25186928 - 25186999
Alignment:
Q  27 gtcaagcaaagtggcccaacatgagaaagtgtgttctgacaatcaacatgcttttataccatttgtttttga 98  Q
    |||||| ||||||| | |||||||||||| |||||| || |||||||||| |||| ||||||||| ||||||    
T  25186928 gtcaagtaaagtggtctaacatgagaaagcgtgttccgataatcaacatgtttttctaccatttgcttttga 25186999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 165 - 212
Target Start/End: Complemental strand, 38839287 - 38839240
Alignment:
Q  165 aggtccatgaatgttgtgtttacgatgattagttttgccatccaaaaa 212  Q
    ||||||||||||||||||||||||| |||| ||||| |||||||||||    
T  38839287 aggtccatgaatgttgtgtttacgaagattggttttaccatccaaaaa 38839240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 150 - 213
Target Start/End: Original strand, 43333961 - 43334024
Alignment:
Q  150 aatgtcatgtctcctaggtccatgaatgttgtgtttacgatgattagttttgccatccaaaaag 213  Q
    |||| |||||||||||| || |||||||||| ||||| ||||||| |||||||||| |||||||    
T  43333961 aatgacatgtctcctagatctatgaatgttgagtttatgatgattggttttgccattcaaaaag 43334024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 150 - 212
Target Start/End: Complemental strand, 5715016 - 5714954
Alignment:
Q  150 aatgtcatgtctcctaggtccatgaatgttgtgtttacgatgattagttttgccatccaaaaa 212  Q
    ||||| ||||||||||||||||| ||||||||||||| || |||| |||||| |||| |||||    
T  5715016 aatgttatgtctcctaggtccataaatgttgtgtttatgaagattggttttgtcatctaaaaa 5714954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 150 - 212
Target Start/End: Complemental strand, 43856850 - 43856788
Alignment:
Q  150 aatgtcatgtctcctaggtccatgaatgttgtgtttacgatgattagttttgccatccaaaaa 212  Q
    ||||||||| |||||||||||||||||||| |||||||||  |||  |||||| |||||||||    
T  43856850 aatgtcatgactcctaggtccatgaatgttatgtttacgagaattgattttgctatccaaaaa 43856788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 150 - 187
Target Start/End: Complemental strand, 10905094 - 10905057
Alignment:
Q  150 aatgtcatgtctcctaggtccatgaatgttgtgtttac 187  Q
    ||||||||||||||||||||||||||||| ||||||||    
T  10905094 aatgtcatgtctcctaggtccatgaatgtcgtgtttac 10905057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 150 - 214
Target Start/End: Complemental strand, 23037521 - 23037457
Alignment:
Q  150 aatgtcatgtctcctaggtccatgaatgttgtgtttacgatgattagttttgccatccaaaaagg 214  Q
    |||||||| |||| |||||| |||||| |||||||||||| ||||  |||||||||| |||||||    
T  23037521 aatgtcatttctcttaggtctatgaattttgtgtttacgaggattgattttgccatctaaaaagg 23037457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 149 - 213
Target Start/End: Original strand, 36558997 - 36559061
Alignment:
Q  149 aaatgtcatgtctcctaggtccatgaatgttgtgtttacgatgattagttttgccatccaaaaag 213  Q
    |||| ||||||||  ||||||||||||||||||||||||||||| |  |||||| ||| ||||||    
T  36558997 aaatatcatgtcttataggtccatgaatgttgtgtttacgatgaatgattttgctatctaaaaag 36559061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 150 - 213
Target Start/End: Original strand, 25187062 - 25187125
Alignment:
Q  150 aatgtcatgtctcctaggtccatgaatgttgtgtttacgatgattagttttgccatccaaaaag 213  Q
    ||||||||||||||||| |||||||||||||||||  | ||||||  |||| ||||| ||||||    
T  25187062 aatgtcatgtctcctagatccatgaatgttgtgttcccaatgattgattttaccatctaaaaag 25187125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 65 - 131
Target Start/End: Original strand, 6634993 - 6635059
Alignment:
Q  65 acaatcaacatgcttttataccatttgtttttgacactttcagttttctagcaccagaggttgttga 131  Q
    |||||||||||  ||||||| |||||| |||||||| ||||  |||| ||||| |||||||||||||    
T  6634993 acaatcaacatatttttatatcatttgcttttgacagtttcgattttttagcatcagaggttgttga 6635059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 150 - 220
Target Start/End: Original strand, 9281267 - 9281337
Alignment:
Q  150 aatgtcatgtctcctaggtccatgaatgttgtgtttacgatgattagttttgccatccaaaaaggtttaac 220  Q
    ||||||||| ||| || |||||| ||||||||||||| ||  ||| ||||||| ||||||||||| |||||    
T  9281267 aatgtcatgactcttaagtccattaatgttgtgtttaggagaattggttttgcaatccaaaaaggcttaac 9281337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 150 - 220
Target Start/End: Original strand, 9292238 - 9292308
Alignment:
Q  150 aatgtcatgtctcctaggtccatgaatgttgtgtttacgatgattagttttgccatccaaaaaggtttaac 220  Q
    ||||||||| ||| || |||||| ||||||||||||| ||  ||| ||||||| ||||||||||| |||||    
T  9292238 aatgtcatgactcttaagtccattaatgttgtgtttaggagaattggttttgcaatccaaaaaggcttaac 9292308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 47 - 131
Target Start/End: Complemental strand, 23793107 - 23793023
Alignment:
Q  47 atgagaaagtgtgttctgacaatcaacatgcttttataccatttgtttttgacactttcagttttc-tagcaccagaggttgttga 131  Q
    |||||||| | |||| ||||||||||||||||| |||| || || | |||||||||||  |||||| |||||||| ||||||||||    
T  23793107 atgagaaaatatgttttgacaatcaacatgcttctatatcaattatgtttgacacttt-tgttttcttagcaccacaggttgttga 23793023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 186
Target Start/End: Original strand, 6635094 - 6635130
Alignment:
Q  150 aatgtcatgtctcctaggtccatgaatgttgtgttta 186  Q
    ||||||||||||||||| ||||| |||||||||||||    
T  6635094 aatgtcatgtctcctagatccataaatgttgtgttta 6635130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 56 - 151
Target Start/End: Original strand, 10032192 - 10032287
Alignment:
Q  56 tgtgttctgacaatcaacatgcttttataccatttgtttttgacactttcagttttctagcaccagaggttgttgaacattc-acatagagttcaaa 151  Q
    ||||||||||||||||| ||| |||||||| ||||| |||||| | |||||| ||  |||||  ||| |||||| ||| ||| ||||||||||||||    
T  10032192 tgtgttctgacaatcaatatgtttttatactatttgcttttgatattttcagcttcttagcattagatgttgtt-aaccttctacatagagttcaaa 10032287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 90; Significance: 1e-43; HSPs: 47)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 25 - 215
Target Start/End: Complemental strand, 53785826 - 53785620
Alignment:
Q  25 gcgtcaagcaaagtggcccaacatgagaaagtgtgttctgacaatcaacatgcttttataccatttgtttttgacactttcagttttctagcaccagagg 124  Q
    |||||||| || |||||| |||| ||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||| |||| |||||||||||||    
T  53785826 gcgtcaagtaaggtggccaaacacgagaaagcgtgttctgacaatcaacatgcttttataccatttgcttttgacactttcggtttcctagcaccagagg 53785727  T
Q  125 ttgttgaacattcacatagagttca----------------aatgtcatgtctcctaggtccatgaatgttgtgtttacgatgattagttttgccatcca 208  Q
    ||||||| | |  ||||||||||||                |||||||||||||||||||||||||||||| ||||||||| |||| |||||||||||||    
T  53785726 ttgttgaccttctacatagagttcaaaaggtcatgcatagcaatgtcatgtctcctaggtccatgaatgttatgtttacgaggattggttttgccatcca 53785627  T
Q  209 aaaaggt 215  Q
    | |||||    
T  53785626 acaaggt 53785620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 18 - 215
Target Start/End: Original strand, 39583212 - 39583425
Alignment:
Q  18 aaaacctgcgtcaagcaaagtggcccaacatgagaaagtgtgttctgacaatcaacatgcttttataccatttgtttttgacactttcagttttctagca 117  Q
    |||| |||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||| |||||||||| ||||||||| |||| ||||||    
T  39583212 aaaagctgcgtcaagcaaagtggccaaacatgagaaagcgtgttctgacaatcaacatgcttttatatcatttgttttcgacactttcggtttcctagca 39583311  T
Q  118 ccagaggttgttgaacattcacatagagttca----------------aatgtcatgtctcctaggtccatgaatgttgtgtttacgatgattagttttg 201  Q
     || |||||||||| | |   |||||||||||                ||||||||||||||||||| ||||||||| |||||||||| ||||  |||||    
T  39583312 tcataggttgttgaccttctgcatagagttcaaagggtcatgcatagcaatgtcatgtctcctaggttcatgaatgtcgtgtttacgaggattgattttg 39583411  T
Q  202 ccatccaaaaaggt 215  Q
    ||||||||||||||    
T  39583412 ccatccaaaaaggt 39583425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 24 - 216
Target Start/End: Complemental strand, 44198885 - 44198677
Alignment:
Q  24 tgcgtcaagcaaagtggcccaacatgagaaagtgtgttctgacaatcaacatgcttttataccatttgtttttgacactttcagttttctagcaccagag 123  Q
    ||||||||||||||||||| |||||||||||| ||||||||| ||||||||||||||||||||||||| ||||||||||||| ||||  || |||| |||    
T  44198885 tgcgtcaagcaaagtggccaaacatgagaaagcgtgttctgagaatcaacatgcttttataccatttgcttttgacactttcggtttcttaacacccgag 44198786  T
Q  124 gttgttgaacattcacatagagttca----------------aatgtcatgtctcctaggtccatgaatgttgtgtttacgatgattagttttgccatcc 207  Q
    | |||||| | |  ||||||||||||                |||||||||||||||||||||||||||||||||||| |||| |||  |||||||||||    
T  44198785 gctgttgaccttctacatagagttcagaaggttatgcatagcaatgtcatgtctcctaggtccatgaatgttgtgtttgcgataattgattttgccatcc 44198686  T
Q  208 aaaaaggtt 216  Q
    |||||||||    
T  44198685 aaaaaggtt 44198677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 36 - 215
Target Start/End: Complemental strand, 32546901 - 32546706
Alignment:
Q  36 agtggcccaacatgagaaagtgtgttctgacaatcaacatgcttttataccatttgtttttgacactttcagttttctagcaccagaggttgttgaacat 135  Q
    ||||||| |||||||||||| |||||| |||||||||||| ||||||||||||||| |||||||||||||||||| ||||||||| ||| |||||| | |    
T  32546901 agtggccaaacatgagaaagcgtgttcggacaatcaacatacttttataccatttgcttttgacactttcagtttcctagcaccaaaggctgttgacctt 32546802  T
Q  136 tcacatagagttca----------------aatgtcatgtctcctaggtccatgaatgttgtgtttacgatgattagttttgccatccaaaaaggt 215  Q
      ||||||||||||                ||||||||||||||||||||||||||||||||||| |||| |||| ||||||||||||||||||||    
T  32546801 ctacatagagttcaaaaagtcatgcatagtaatgtcatgtctcctaggtccatgaatgttgtgttcacgaggattggttttgccatccaaaaaggt 32546706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 17 - 151
Target Start/End: Original strand, 52741494 - 52741628
Alignment:
Q  17 aaaaacctgcgtcaagcaaagtggcccaacatgagaaagtgtgttctgacaatcaacatgcttttataccatttgtttttgacactttcagttttctagc 116  Q
    ||||| ||| ||||| |||| || || |||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||  |||| |||||    
T  52741494 aaaaagctgagtcaaacaaattgaccaaacatgagaaagcgtgttctgacaatcaacatgcttttataccatttgcttttgacacttttggtttcctagc 52741593  T
Q  117 accagaggttgttgaacattcacatagagttcaaa 151  Q
    ||||||||||||||| | |  ||||||||||||||    
T  52741594 accagaggttgttgaccttctacatagagttcaaa 52741628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 18 - 131
Target Start/End: Complemental strand, 7900982 - 7900869
Alignment:
Q  18 aaaacctgcgtcaagcaaagtggcccaacatgagaaagtgtgttctgacaatcaacatgcttttataccatttgtttttgacactttcagttttctagca 117  Q
    |||| |||||||||||||| | ||| |||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||| | || ||||||    
T  7900982 aaaaactgcgtcaagcaaaatagccgaacatgagaaagcgttttctgacaatcaacatgcttttataccatttgtttttgacactttcggcttcctagca 7900883  T
Q  118 ccagaggttgttga 131  Q
     |||||||||||||    
T  7900882 tcagaggttgttga 7900869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 24 - 213
Target Start/End: Original strand, 3443301 - 3443506
Alignment:
Q  24 tgcgtcaagcaaagtggcccaacatgagaaagtgtgttctgacaatcaacatgcttttataccatttgtttttgacactttcagttttctagcaccagag 123  Q
    ||||||||||||| ||||| ||||||| ||||||| |||| ||||||||||||||||||||||||||  | |||||||||||||||| ||||||| ||||    
T  3443301 tgcgtcaagcaaaatggccaaacatgaaaaagtgtattctaacaatcaacatgcttttataccattttctgttgacactttcagtttcctagcactagag 3443400  T
Q  124 gttgttgaacattcacatagagttca----------------aatgtcatgtctcctaggtccatgaatgttgtgtttacgatgattagttttgccatcc 207  Q
    |||||||| | |  ||||||||||||                |||||| |||||||||  || |||||||||||||||||||||||| ||||||||||||    
T  3443401 gttgttgaccttctacatagagttcaaagggtcatgcgtaggaatgtcttgtctcctaaatctatgaatgttgtgtttacgatgattggttttgccatcc 3443500  T
Q  208 aaaaag 213  Q
    | ||||    
T  3443501 acaaag 3443506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 26 - 148
Target Start/End: Original strand, 37132990 - 37133112
Alignment:
Q  26 cgtcaagcaaagtggcccaacatgagaaagtgtgttctgacaatcaacatgcttttataccatttgtttttgacactttcagttttctagcaccagaggt 125  Q
    |||||||||||||||   |||||||||||| |||||||||||||||||||| ||||||||||||||||||| |||||||| ||||  |||||||||||||    
T  37132990 cgtcaagcaaagtggttaaacatgagaaagcgtgttctgacaatcaacatgtttttataccatttgttttttacactttcggtttcttagcaccagaggt 37133089  T
Q  126 tgttgaacattcacatagagttc 148  Q
    |||||| | |  |||||||||||    
T  37133090 tgttgaccttctacatagagttc 37133112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 27 - 215
Target Start/End: Complemental strand, 26772873 - 26772669
Alignment:
Q  27 gtcaagcaaagtggcccaacatgagaaagtgtgttctgacaatcaacatgcttttataccatttgtttttgacactttcagttttctagcaccagaggtt 126  Q
    |||||||||||||||| ||||| |||||  ||||||||||||||||||||||||||||||||||| ||||||||||||  | || |||||| ||||||      
T  26772873 gtcaagcaaagtggccaaacatcagaaaacgtgttctgacaatcaacatgcttttataccatttgcttttgacacttttggcttcctagcatcagaggca 26772774  T
Q  127 gttgaacattcacatagagttca----------------aatgtcatgtctcctaggtccatgaatgttgtgtttacgatgattagttttgccatccaaa 210  Q
    ||||| | |  | ||||||| ||                ||||| |||||||||||||||||||||||||||||||||| ||||  ||||||||||||||    
T  26772773 gttgaccttctatatagagtacaaaggattatgcataacaatgttatgtctcctaggtccatgaatgttgtgtttacgaggattgattttgccatccaaa 26772674  T
Q  211 aaggt 215  Q
    |||||    
T  26772673 aaggt 26772669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 33 - 131
Target Start/End: Complemental strand, 49018072 - 49017974
Alignment:
Q  33 caaagtggcccaacatgagaaagtgtgttctgacaatcaacatgcttttataccatttgtttttgacactttcagttttctagcaccagaggttgttga 131  Q
    ||||||| || |||||||||||||||||||| |||||||||||| ||||||||||||| ||||| |||||||| |||| |||||||| |||||||||||    
T  49018072 caaagtgaccaaacatgagaaagtgtgttctaacaatcaacatgtttttataccattttttttttacactttcggtttcctagcacccgaggttgttga 49017974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 44 - 124
Target Start/End: Original strand, 38670889 - 38670969
Alignment:
Q  44 aacatgagaaagtgtgttctgacaatcaacatgcttttataccatttgtttttgacactttcagttttctagcaccagagg 124  Q
    |||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||  | ||||||||| ||||||    
T  38670889 aacatgagaaagcgtgttctgacaatcaacatgcttttatacaatttgtttttgacacttttggctttctagcatcagagg 38670969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 24 - 104
Target Start/End: Original strand, 46940759 - 46940839
Alignment:
Q  24 tgcgtcaagcaaagtggcccaacatgagaaagtgtgttctgacaatcaacatgcttttataccatttgtttttgacacttt 104  Q
    ||||||||||||||||||| ||||| |||||   ||||| |||||||||||||||||||||||||||||||||||||||||    
T  46940759 tgcgtcaagcaaagtggccaaacattagaaaacatgttccgacaatcaacatgcttttataccatttgtttttgacacttt 46940839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 47 - 220
Target Start/End: Original strand, 52411903 - 52412092
Alignment:
Q  47 atgagaaagtgtgttctgacaatcaacatgcttttataccatttgtttttgacactttcagttttctagcaccagaggttgttgaacattcacatagagt 146  Q
    |||||| || ||||||||||||||||||||||||||| ||||||| ||||||||||||||| |||||| ||| ||| || ||||| | |  |||||||||    
T  52411903 atgagagagcgtgttctgacaatcaacatgcttttattccatttgcttttgacactttcagctttctaacactagatgtcgttgaccttctacatagagt 52412002  T
Q  147 tcaaa----------------tgtcatgtctcctaggtccatgaatgttgtgtttacgatgattagttttgccatccaaaaaggtttaac 220  Q
    |||||                |||||||||||||||  |||| ||| |||||||||| ||||||  |||||||||||||||||| |||||    
T  52412003 tcaaagggtcatgcataacaatgtcatgtctcctagacccataaatattgtgtttacaatgattgattttgccatccaaaaaggcttaac 52412092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 44 - 151
Target Start/End: Complemental strand, 51234714 - 51234607
Alignment:
Q  44 aacatgagaaagtgtgttctgacaatcaacatgcttttataccatttgtttttgacactttcagttttctagcaccagaggttgttgaacattcacatag 143  Q
    ||||||| ||||  |||| |||||| ||||||||||||||||||||| ||||||||||||||   ||||||||| ||||||||||||| | |  ||||||    
T  51234714 aacatgaaaaagcatgttatgacaaccaacatgcttttataccatttatttttgacactttcgactttctagcatcagaggttgttgaccttctacatag 51234615  T
Q  144 agttcaaa 151  Q
    ||||||||    
T  51234614 agttcaaa 51234607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 150 - 217
Target Start/End: Original strand, 4669794 - 4669861
Alignment:
Q  150 aatgtcatgtctcctaggtccatgaatgttgtgtttacgatgattagttttgccatccaaaaaggttt 217  Q
    ||||||||||||||| |||||||||||||||||||||||||||||  |||||  ||||||||||||||    
T  4669794 aatgtcatgtctccttggtccatgaatgttgtgtttacgatgattgattttgttatccaaaaaggttt 4669861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 18 - 214
Target Start/End: Complemental strand, 13582633 - 13582422
Alignment:
Q  18 aaaacctgcgtcaagcaaagtggcccaacatgagaaagtgtgttctgacaatcaacatgcttttataccatttgtttttgacactttcagttttctagca 117  Q
    |||| ||||||||| |||||||  | ||||| |||||||||||||||||||||||| || ||||||||||||||||||| |||||||   ||| ||||||    
T  13582633 aaaagctgcgtcaatcaaagtgatcaaacataagaaagtgtgttctgacaatcaacgtgtttttataccatttgttttt-acacttttgatttcctagca 13582535  T
Q  118 ccagaggttgttgaacattcacatagagttca----------------aatgtcatgtctcctaggtccatgaatgttgtgtttacgatgattagttttg 201  Q
    |||    ||||||| | |  ||| ||||||||                |||||||||||||||||| ||||||||||||||||||||| ||||  ||| |    
T  13582534 ccaacaattgttgaccttctacagagagttcaaaaggtcatgcataacaatgtcatgtctcctaggaccatgaatgttgtgtttacgaagattgatttag 13582435  T
Q  202 ccatccaaaaagg 214  Q
    |||||||||||||    
T  13582434 ccatccaaaaagg 13582422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 24 - 122
Target Start/End: Complemental strand, 4473179 - 4473081
Alignment:
Q  24 tgcgtcaagcaaagtggcccaacatgagaaagtgtgttctgacaatcaacatgcttttataccatttgtttttgacactttcagttttctagcaccaga 122  Q
    |||||||||||||||| |  ||||||| |||| ||||||| || ||||| ||| |||||||| ||||||||||||||||||| | || |||||||||||    
T  4473179 tgcgtcaagcaaagtgtcaaaacatgaaaaagcgtgttctaaccatcaatatgtttttatactatttgtttttgacactttcggcttcctagcaccaga 4473081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 24 - 151
Target Start/End: Complemental strand, 5338764 - 5338634
Alignment:
Q  24 tgcgtcaagcaaagtggcccaacatgagaaagtgtgttc---tgacaatcaacatgcttttataccatttgtttttgacactttcagttttctagcacca 120  Q
    |||||||| |||| | ||| |||||||||||||| |||    ||||| ||||||||||||||||| ||||| ||||||||||||| | || ||||||| |    
T  5338764 tgcgtcaaacaaaattgccaaacatgagaaagtgcgttgcgttgacagtcaacatgcttttatacaatttgcttttgacactttcggcttcctagcacta 5338665  T
Q  121 gaggttgttgaacattc-acatagagttcaaa 151  Q
    ||| |||||| |||||| ||||||||||||||    
T  5338664 gagattgttg-acattctacatagagttcaaa 5338634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 27 - 131
Target Start/End: Original strand, 7502003 - 7502108
Alignment:
Q  27 gtcaagcaaagtggcccaacatgagaaagtgtgttctgacaatcaacatgctttt-ataccatttgtttttgacactttcagttttctagcaccagaggt 125  Q
    |||||| ||||||| | |||||||||||| ||||||  |||||||||||| |||| |||||||||  |||||||| |||  |||| ||||||||||||||    
T  7502003 gtcaagtaaagtggtcaaacatgagaaagcgtgttcgaacaatcaacatgttttttataccattttcttttgacatttttggtttcctagcaccagaggt 7502102  T
Q  126 tgttga 131  Q
    ||||||    
T  7502103 tgttga 7502108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 150 - 214
Target Start/End: Original strand, 4763924 - 4763987
Alignment:
Q  150 aatgtcatgtctcctaggtccatgaatgttgtgtttacgatgattagttttgccatccaaaaagg 214  Q
    ||||||||||||||| |||||||||||||||||||||||| ||||||  ||||||||||||||||    
T  4763924 aatgtcatgtctcct-ggtccatgaatgttgtgtttacgaggattagaattgccatccaaaaagg 4763987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 154 - 230
Target Start/End: Original strand, 7257691 - 7257767
Alignment:
Q  154 tcatgtctcctaggtccatgaatgttgtgtttacgatgattagttttgccatccaaaaaggtttaactgcacaggtt 230  Q
    |||||| | ||||||||||||||||||||||||||| ||||||||||| ||| |||||||| ||||| ||| |||||    
T  7257691 tcatgtattctaggtccatgaatgttgtgtttacgaagattagttttgtcattcaaaaaggcttaacagcataggtt 7257767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 44 - 151
Target Start/End: Complemental strand, 21552765 - 21552659
Alignment:
Q  44 aacatgagaaagtgtgttctgacaatcaacatgcttttataccatttgtttttgacactttcagttttctagcaccagaggttgttgaacattcacatag 143  Q
    |||||| |||| ||| || |||||||||||||||||| ||||||||| ||||||||| ||||||||| |||||| |||||  |||||| | |  ||||||    
T  21552765 aacatgggaaaatgtattatgacaatcaacatgcttt-ataccatttatttttgacattttcagtttcctagcatcagagactgttgaccttctacatag 21552667  T
Q  144 agttcaaa 151  Q
    ||||||||    
T  21552666 agttcaaa 21552659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 150 - 213
Target Start/End: Complemental strand, 38146032 - 38145969
Alignment:
Q  150 aatgtcatgtctcctaggtccatgaatgttgtgtttacgatgattagttttgccatccaaaaag 213  Q
    |||||||||||||||||||||||||| ||||||||||||||||||  ||||| |||| ||||||    
T  38146032 aatgtcatgtctcctaggtccatgaacgttgtgtttacgatgattgattttgtcatctaaaaag 38145969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 150 - 212
Target Start/End: Original strand, 38671011 - 38671073
Alignment:
Q  150 aatgtcatgtctcctaggtccatgaatgttgtgtttacgatgattagttttgccatccaaaaa 212  Q
    ||||| |||||||||||||||||||||||||||| ||||| |||| ||||||||||| |||||    
T  38671011 aatgttatgtctcctaggtccatgaatgttgtgtgtacgaggattggttttgccatctaaaaa 38671073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 150 - 220
Target Start/End: Original strand, 38978930 - 38979000
Alignment:
Q  150 aatgtcatgtctcctaggtccatgaatgttgtgtttacgatgattagttttgccatccaaaaaggtttaac 220  Q
    ||||||||||||| |||||  || ||||||||||||||||  ||||||||||||||||||||||| |||||    
T  38978930 aatgtcatgtctcataggtttatcaatgttgtgtttacgaaaattagttttgccatccaaaaaggcttaac 38979000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 58 - 131
Target Start/End: Original strand, 54508407 - 54508480
Alignment:
Q  58 tgttctgacaatcaacatgcttttataccatttgtttttgacactttcagttttctagcaccagaggttgttga 131  Q
    |||||||||||| |||||| ||||||| |||||| |||||||| |||   ||||||||||||||||||||||||    
T  54508407 tgttctgacaattaacatgtttttatatcatttgcttttgacatttttgattttctagcaccagaggttgttga 54508480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 47 - 151
Target Start/End: Original strand, 26856774 - 26856878
Alignment:
Q  47 atgagaaagtgtgttctgacaatcaacatgcttttataccatttgtttttgacactttcagttttctagcaccagaggttgttgaacattcacatagagt 146  Q
    |||| |||| ||||| |||||||||||||||||||||||||| || ||||||| |||||  ||| ||||||| ||||  |||||| | |  |||||||||    
T  26856774 atgataaagcgtgttgtgacaatcaacatgcttttataccatctgcttttgacgctttcgatttcctagcactagagactgttgaccttctacatagagt 26856873  T
Q  147 tcaaa 151  Q
    |||||    
T  26856874 tcaaa 26856878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 150 - 214
Target Start/End: Original strand, 26856893 - 26856957
Alignment:
Q  150 aatgtcatgtctcctaggtccatgaatgttgtgtttacgatgattagttttgccatccaaaaagg 214  Q
    |||||||||||||||||||  |||||||||||| || ||| |||| ||||| |||||||||||||    
T  26856893 aatgtcatgtctcctaggtttatgaatgttgtgcttgcgaggattggttttaccatccaaaaagg 26856957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 154 - 213
Target Start/End: Complemental strand, 21552636 - 21552577
Alignment:
Q  154 tcatgtctcctaggtccatgaatgttgtgtttacgatgattagttttgccatccaaaaag 213  Q
    |||| ||||||||||||||||||||||||||||| |  ||| |||||| |||||||||||    
T  21552636 tcatatctcctaggtccatgaatgttgtgtttacaagaattggttttgacatccaaaaag 21552577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 150 - 215
Target Start/End: Complemental strand, 44812 - 44744
Alignment:
Q  150 aatgtcatgtctcctaggtccatgaatg---ttgtgtttacgatgattagttttgccatccaaaaaggt 215  Q
    |||||||||| |||||||||||||||||   ||||||| || | |||| ||||||||||||||||||||    
T  44812 aatgtcatgtttcctaggtccatgaatgttgttgtgttcacaaggatttgttttgccatccaaaaaggt 44744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 154 - 212
Target Start/End: Complemental strand, 4473034 - 4472976
Alignment:
Q  154 tcatgtctcctaggtccatgaatgttgtgtttacgatgattagttttgccatccaaaaa 212  Q
    |||||||||||||||| |||||| ||||||||||||  ||| |||||| ||||||||||    
T  4473034 tcatgtctcctaggtctatgaatattgtgtttacgagaattggttttgtcatccaaaaa 4472976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 150 - 212
Target Start/End: Complemental strand, 7900834 - 7900772
Alignment:
Q  150 aatgtcatgtctcctaggtccatgaatgttgtgtttacgatgattagttttgccatccaaaaa 212  Q
    ||||| |||| |||||||||||| ||| || ||||||| |||||||||||| |||||||||||    
T  7900834 aatgttatgtttcctaggtccatcaatattttgtttacaatgattagttttaccatccaaaaa 7900772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 167 - 220
Target Start/End: Original strand, 25094720 - 25094773
Alignment:
Q  167 gtccatgaatgttgtgtttacgatgattagttttgccatccaaaaaggtttaac 220  Q
    |||||||||||||||||| |||| |||||||||||| ||| ||||||| |||||    
T  25094720 gtccatgaatgttgtgttcacgaagattagttttgcaatctaaaaaggcttaac 25094773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 164 - 213
Target Start/End: Complemental strand, 26276577 - 26276528
Alignment:
Q  164 taggtccatgaatgttgtgtttacgatgattagttttgccatccaaaaag 213  Q
    ||||||||||||||||||||||| || ||||  |||||||||||||||||    
T  26276577 taggtccatgaatgttgtgtttatgaggattgattttgccatccaaaaag 26276528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 150 - 215
Target Start/End: Original strand, 37133130 - 37133195
Alignment:
Q  150 aatgtcatgtctcctaggtccatgaatgttgtgtttacgatgattagttttgccatccaaaaaggt 215  Q
    |||||||||||||||| ||  ||||||||||||||||  | |||| ||||||| ||||||||||||    
T  37133130 aatgtcatgtctcctaagttaatgaatgttgtgtttataaggattggttttgcgatccaaaaaggt 37133195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 63 - 124
Target Start/End: Original strand, 38978827 - 38978888
Alignment:
Q  63 tgacaatcaacatgcttttataccatttgtttttgacactttcagttttctagcaccagagg 124  Q
    |||||||||| ||| |||||||| ||||||||||||||||||  |||| |||||||| ||||    
T  38978827 tgacaatcaatatgtttttatactatttgtttttgacacttttggtttcctagcacctgagg 38978888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 150 - 215
Target Start/End: Original strand, 52741643 - 52741708
Alignment:
Q  150 aatgtcatgtctcctaggtccatgaatgttgtgtttacgatgattagttttgccatccaaaaaggt 215  Q
    ||||||||||||||||| |||||  || |||| || |||| |||| ||||||||||||||||||||    
T  52741643 aatgtcatgtctcctagatccatttatcttgtattcacgaagatttgttttgccatccaaaaaggt 52741708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 57 - 129
Target Start/End: Complemental strand, 38146141 - 38146069
Alignment:
Q  57 gtgttctgacaatcaacatgcttttataccatttgtttttgacactttcagttttctagcaccagaggttgtt 129  Q
    ||||| |||||||||||||| |||||||||||||   |||||||||||    || ||||||||||||||||||    
T  38146141 gtgttttgacaatcaacatgtttttataccatttacatttgacacttttgacttcctagcaccagaggttgtt 38146069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 27 - 90
Target Start/End: Complemental strand, 37992447 - 37992384
Alignment:
Q  27 gtcaagcaaagtggcccaacatgagaaagtgtgttctgacaatcaacatgcttttataccattt 90  Q
    ||||| ||||||| || |||||||| |||  ||||||||||||||||||| ||||||| |||||    
T  37992447 gtcaaacaaagtgaccaaacatgaggaagcatgttctgacaatcaacatgattttatatcattt 37992384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 131
Target Start/End: Complemental strand, 43123259 - 43123156
Alignment:
Q  28 tcaagcaaagtggcccaacatgagaaagtgtgttctgacaatcaacatgcttttataccatttgtttttgacactttcagttttctagcaccagaggttg 127  Q
    |||||||||||| |  ||||||| ||||  ||||||||||||||||||| | |||||| ||||    ||||||||||   ||||||||||||| || |||    
T  43123259 tcaagcaaagtgtctaaacatgataaaggatgttctgacaatcaacatgttgttatactatttacgattgacacttttgattttctagcaccatagtttg 43123160  T
Q  128 ttga 131  Q
    ||||    
T  43123159 ttga 43123156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 154 - 209
Target Start/End: Original strand, 54508519 - 54508574
Alignment:
Q  154 tcatgtctcctaggtccatgaatgttgtgtttacgatgattagttttgccatccaa 209  Q
    |||| ||| |||||||||||||||||||||||| ||| ||| |||||| |||||||    
T  54508519 tcatatctgctaggtccatgaatgttgtgtttaagataattggttttgtcatccaa 54508574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 173 - 211
Target Start/End: Complemental strand, 5338599 - 5338561
Alignment:
Q  173 gaatgttgtgtttacgatgattagttttgccatccaaaa 211  Q
    ||||||||||||||||| |||| ||||||||||||||||    
T  5338599 gaatgttgtgtttacgaggattggttttgccatccaaaa 5338561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 150 - 212
Target Start/End: Complemental strand, 25325005 - 25324943
Alignment:
Q  150 aatgtcatgtctcctaggtccatgaatgttgtgtttacgatgattagttttgccatccaaaaa 212  Q
    ||||||| || |||||  ||||||||| ||||| |||||||||||  ||||||||||||||||    
T  25325005 aatgtcaagtttcctaaatccatgaatattgtgcttacgatgattgcttttgccatccaaaaa 25324943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 156 - 218
Target Start/End: Original strand, 26393823 - 26393885
Alignment:
Q  156 atgtctcctaggtccatgaatgttgtgtttacgatgattagttttgccatccaaaaaggttta 218  Q
    ||||||||| |||| ||||||||||||||||||| ||||  | || |||||||| ||||||||    
T  26393823 atgtctccttggtctatgaatgttgtgtttacgaggattgatatttccatccaacaaggttta 26393885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 150 - 215
Target Start/End: Original strand, 35484811 - 35484876
Alignment:
Q  150 aatgtcatgtctcctaggtccatgaatgttgtgtttacgatgattagttttgccatccaaaaaggt 215  Q
    ||||||| |||| ||||||  ||||||||||||| ||| | || || |||||||||||||||||||    
T  35484811 aatgtcaagtcttctaggtatatgaatgttgtgtctacaaggaataattttgccatccaaaaaggt 35484876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 164 - 213
Target Start/End: Complemental strand, 49017929 - 49017880
Alignment:
Q  164 taggtccatgaatgttgtgtttacgatgattagttttgccatccaaaaag 213  Q
    |||||| |||||||||||||||| || ||||  |||||||||||||||||    
T  49017929 taggtcaatgaatgttgtgtttatgaggattgattttgccatccaaaaag 49017880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 153
Target Start/End: Complemental strand, 25325149 - 25325018
Alignment:
Q  24 tgcgtcaagcaaagtggcccaacatgagaaagtgtgttctgacaatcaacat--gcttttataccatttgtttttgacactttcagttttctagcaccag 121  Q
    |||||||||||||||| |  ||||| | |||  || || || ||||||||||  | |||||||||||||| |||  ||||||||  ||| |||||||||     
T  25325149 tgcgtcaagcaaagtgacaaaacattataaaacgtattttggcaatcaacatatgtttttataccatttgctttcaacactttcgatttcctagcaccat 25325050  T
Q  122 aggttgttgaacattcacatagagttcaaatg 153  Q
    || ||||||| | |  ||||||||||||||||    
T  25325049 agattgttgaccttctacatagagttcaaatg 25325018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 85; Significance: 1e-40; HSPs: 39)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 18 - 215
Target Start/End: Original strand, 4413049 - 4413262
Alignment:
Q  18 aaaacctgcgtcaagcaaagtggcccaacatgagaaagtgtgttctgacaatcaacatgcttttataccatttgtttttgacactttcagttttctagca 117  Q
    |||| ||| |||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||| |||| ||||||    
T  4413049 aaaagctgtgtcaagcaaagtggccaaacatgagaaagcgtgttctgacaatcaacatgcttttataccatttgcttttgacactttcggtttcctagca 4413148  T
Q  118 ccagaggttgttgaacattcacatagagttca----------------aatgtcatgtctcctaggtccatgaatgttgtgtttacgatgattagttttg 201  Q
    |||||| ||||||| | |  |||||| |||||                || |||||||||||||||||||||||||||||||| | || ||||  |||||    
T  4413149 ccagagattgttgaccttctacatagggttcaaaaggtcatgcatagcaaagtcatgtctcctaggtccatgaatgttgtgttcatgaggattgattttg 4413248  T
Q  202 ccatccaaaaaggt 215  Q
    ||||||||||||||    
T  4413249 ccatccaaaaaggt 4413262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 18 - 213
Target Start/End: Original strand, 41867891 - 41868101
Alignment:
Q  18 aaaacctgcgtcaagcaaagtggcccaacatgagaaagtgtgttctgacaatcaacatgcttttataccatttgtttttgacactttcagttttctagca 117  Q
    |||| |||||||||||||||||| | ||||||||||||  |||||||||||||||||||||||||||||||||| ||||||||||||| | || ||||||    
T  41867891 aaaagctgcgtcaagcaaagtggtcaaacatgagaaagcatgttctgacaatcaacatgcttttataccatttgcttttgacactttcgggttcctagca 41867990  T
Q  118 ccagaggttgttgaacattcacatagagttca----------------aatgtcatgtctcctaggtccatgaatgttgtgtttacgatgattagttttg 201  Q
    ||||||| |||||| | |  ||||||||||||                |||||||||||||| ||||||||||||||||||||||||| |||| ||||||    
T  41867991 ccagaggctgttgaccttctacatagagttcaaaaggtcatgcataacaatgtcatgtctcccaggtccatgaatgttgtgtttacgaggattggttttg 41868090  T
Q  202 ccatccaaaaag 213  Q
    ||| ||||||||    
T  41868091 cca-ccaaaaag 41868101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 25 - 215
Target Start/End: Original strand, 9685405 - 9685611
Alignment:
Q  25 gcgtcaagcaaagtggcccaacatgagaaagtgtgttctgacaatcaacatgcttttataccatttgtttttgacactttcagttttctagcaccagagg 124  Q
    |||||||||||||||||| ||||||| |||| ||||||||||||||||||||||||||||||||||| ||||||||||||   ||||||||||| |||||    
T  9685405 gcgtcaagcaaagtggccaaacatgaaaaagcgtgttctgacaatcaacatgcttttataccatttgcttttgacacttttgattttctagcactagagg 9685504  T
Q  125 ttgttgaacattcacatagagttca----------------aatgtcatgtctcctaggtccatgaatgttgtgtttacgatgattagttttgccatcca 208  Q
     ||| || | |  | ||||||||||                ||||||||||||||||||||||||||||||||||| || | ||||  ||||||||||||    
T  9685505 ctgtggaccttctatatagagttcaaaaggtcatggatagcaatgtcatgtctcctaggtccatgaatgttgtgttcacaaagattgtttttgccatcca 9685604  T
Q  209 aaaaggt 215  Q
    |||||||    
T  9685605 aaaaggt 9685611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 23 - 215
Target Start/End: Complemental strand, 17344757 - 17344549
Alignment:
Q  23 ctgcgtcaagcaaagtggcccaacatgagaaagtgtgttctgacaatcaacatgcttttataccatttgtttttgacactttcagttttctagcaccaga 122  Q
    |||||||||| || |||||| |||| ||||||  ||||| | ||||||||||||||||||||||||||| |||||||||||||||||| ||||||||| |    
T  17344757 ctgcgtcaagtaaggtggccaaacacgagaaaacgtgttttcacaatcaacatgcttttataccatttgcttttgacactttcagtttcctagcaccata 17344658  T
Q  123 ggttgttgaacattcacatagagttca----------------aatgtcatgtctcctaggtccatgaatgttgtgtttacgatgattagttttgccatc 206  Q
    || |||||| | |  ||||||||||||                |||||||||||||||||||||||||||||||||||||||| ||||  |||| | |||    
T  17344657 ggctgttgaccttctacatagagttcaaaaggtcatgcataacaatgtcatgtctcctaggtccatgaatgttgtgtttacgaggattgatttttcgatc 17344558  T
Q  207 caaaaaggt 215  Q
    |||||||||    
T  17344557 caaaaaggt 17344549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 18 - 215
Target Start/End: Complemental strand, 28225124 - 28224911
Alignment:
Q  18 aaaacctgcgtcaagcaaagtggcccaacatgagaaagtgtgttctgacaatcaacatgcttttataccatttgtttttgacactttcagttttctagca 117  Q
    |||| ||||||||||||||||| || || ||||||||| || |||||||||||||||||||||||||||||||| ||||||||||||| | || |||||     
T  28225124 aaaagctgcgtcaagcaaagtgaccaaatatgagaaagcgtattctgacaatcaacatgcttttataccatttgcttttgacactttcggcttcctagct 28225025  T
Q  118 ccagaggttgttgaacattcacatagagttca----------------aatgtcatgtctcctaggtccatgaatgttgtgtttacgatgattagttttg 201  Q
     ||||||||||||| | |  ||||||||| ||                ||| | |||||||||||||| |||||||||||||||| || |||| ||||||    
T  28225024 tcagaggttgttgaccttctacatagagtccaaaggattatgcatgacaatattatgtctcctaggtcaatgaatgttgtgtttatgaagatttgttttg 28224925  T
Q  202 ccatccaaaaaggt 215  Q
    ||||||||||||||    
T  28224924 ccatccaaaaaggt 28224911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 18 - 151
Target Start/End: Complemental strand, 5532543 - 5532411
Alignment:
Q  18 aaaacctgcgtcaagcaaagtggcccaacatgagaaagtgtgttctgacaatcaacatgcttttataccatttgtttttgacactttcagttttctagca 117  Q
    |||| |||||||||||||||||| | |||||||||||  ||||| ||||||||||||||||||||||| ||||  |||||||||||| || || ||||||    
T  5532543 aaaagctgcgtcaagcaaagtggtcaaacatgagaaaacgtgttgtgacaatcaacatgcttttatactatttacttttgacacttt-agcttcctagca 5532445  T
Q  118 ccagaggttgttgaacattcacatagagttcaaa 151  Q
    ||| |||||||||| | |  ||||||||||||||    
T  5532444 ccataggttgttgagcttctacatagagttcaaa 5532411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 18 - 151
Target Start/End: Original strand, 19161766 - 19161899
Alignment:
Q  18 aaaacctgcgtcaagcaaagtggcccaacatgagaaagtgtgttctgacaatcaacatgcttttataccatttgtttttgacactttcagttttctagca 117  Q
    |||| |||||||||| ||||||| | ||||||| |||| |||||||||||||||||||| |||||||||||||| ||||||||||||| ||||| || ||    
T  19161766 aaaatctgcgtcaagaaaagtgggcaaacatgaaaaagcgtgttctgacaatcaacatgtttttataccatttgcttttgacactttcggttttgtaaca 19161865  T
Q  118 ccagaggttgttgaacattcacatagagttcaaa 151  Q
    | ||||| || | | | || ||||||||||||||    
T  19161866 ctagaggctgcttaccttttacatagagttcaaa 19161899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 26 - 123
Target Start/End: Original strand, 23484929 - 23485025
Alignment:
Q  26 cgtcaagcaaagtggcccaacatgagaaagtgtgttctgacaatcaacatgcttttataccatttgtttttgacactttcagttttctagcaccagag 123  Q
    |||||| |||||||||| || |||||||||  |||||||||||||||||||||||||||||||||||||||||||| ||| |||| ||||||||||||    
T  23484929 cgtcaaacaaagtggccaaatatgagaaagcatgttctgacaatcaacatgcttttataccatttgtttttgacac-ttctgtttcctagcaccagag 23485025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 37 - 151
Target Start/End: Original strand, 18744956 - 18745070
Alignment:
Q  37 gtggcccaacatgagaaagtgtgttctgacaatcaacatgcttttataccatttgtttttgacactttcagttttctagcaccagaggttgttgaacatt 136  Q
    |||||| |||| ||||||| ||||||||||||||||||| ||||||||||||||| |||||||| ||||  ||||||||||||| ||| |||||  | |     
T  18744956 gtggccaaacacgagaaagcgtgttctgacaatcaacatacttttataccatttgcttttgacattttcgattttctagcaccataggctgttggccttc 18745055  T
Q  137 cacatagagttcaaa 151  Q
     ||||||||||||||    
T  18745056 tacatagagttcaaa 18745070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 52 - 151
Target Start/End: Original strand, 2886632 - 2886731
Alignment:
Q  52 aaagtgtgttctgacaatcaacatgcttttataccatttgtttttgacactttcagttttctagcaccagaggttgttgaacattcacatagagttcaaa 151  Q
    ||||||||||||||||||||||||| ||||||| ||||||||||||| | |||| |||| | |||| |||||| |||||| | || ||||||||||||||    
T  2886632 aaagtgtgttctgacaatcaacatgtttttatatcatttgtttttgatattttcggtttccaagcatcagaggctgttgatcttttacatagagttcaaa 2886731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 24 - 131
Target Start/End: Complemental strand, 2888634 - 2888527
Alignment:
Q  24 tgcgtcaagcaaagtggcccaacatgagaaagtgtgttctgacaatcaacatgcttttataccatttgtttttgacactttcagttttctagcaccagag 123  Q
    |||||| |||||||||| | |||||||||||  |||||||||||||||||||| |||||||||||| |||| |||||||||  | || ||| ||| ||||    
T  2888634 tgcgtctagcaaagtggacaaacatgagaaaacgtgttctgacaatcaacatgtttttataccattcgtttatgacacttttggcttcctaacacaagag 2888535  T
Q  124 gttgttga 131  Q
    ||||||||    
T  2888534 gttgttga 2888527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 44 - 153
Target Start/End: Original strand, 34814828 - 34814936
Alignment:
Q  44 aacatgagaaagtgtgttctgacaatcaacatgcttttataccatttgtttttgacactttcagttttctagcaccagaggttgttgaacattcacatag 143  Q
    |||||||||||| |||||||||||||||| |||||||||||||||||| ||| ||||||||| | || ||| ||||||||  |||||| | |  ||||||    
T  34814828 aacatgagaaagcgtgttctgacaatcaatatgcttttataccatttgctttcgacactttc-ggttcctaacaccagagactgttgaccttctacatag 34814926  T
Q  144 agttcaaatg 153  Q
    ||||||||||    
T  34814927 agttcaaatg 34814936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 150 - 214
Target Start/End: Complemental strand, 13413327 - 13413263
Alignment:
Q  150 aatgtcatgtctcctaggtccatgaatgttgtgtttacgatgattagttttgccatccaaaaagg 214  Q
    ||||||||||||||||||||||||||||||||||||| ||  ||| |||||||||||||||||||    
T  13413327 aatgtcatgtctcctaggtccatgaatgttgtgtttatgagaattggttttgccatccaaaaagg 13413263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 63 - 151
Target Start/End: Original strand, 20142753 - 20142841
Alignment:
Q  63 tgacaatcaacatgcttttataccatttgtttttgacactttcagttttctagcaccagaggttgttgaacattcacatagagttcaaa 151  Q
    ||||||||||||||||||||||||||||  ||||||||||||  ||||||||||| || |||||||||| | |  ||||||||||||||    
T  20142753 tgacaatcaacatgcttttataccattttcttttgacacttttggttttctagcatcaaaggttgttgaccttatacatagagttcaaa 20142841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 25 - 131
Target Start/End: Original strand, 13147087 - 13147196
Alignment:
Q  25 gcgtcaagcaaagtggcccaacatgagaaagtgtgttctgacaatcaacat---gcttttataccatttgtttttgacactttcagttttctagcaccag 121  Q
    |||||||| ||||||| | |||||||||||| ||||||||||||||| |||     |||||||||||||| ||||||||||||  |||||||| ||||||    
T  13147087 gcgtcaagaaaagtggtcaaacatgagaaagcgtgttctgacaatcagcatatactttttataccatttgattttgacacttttggttttctaacaccag 13147186  T
Q  122 aggttgttga 131  Q
    || |||||||    
T  13147187 agattgttga 13147196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 18 - 105
Target Start/End: Complemental strand, 27502486 - 27502399
Alignment:
Q  18 aaaacctgcgtcaagcaaagtggcccaacatgagaaagtgtgttctgacaatcaacatgcttttataccatttgtttttgacactttc 105  Q
    |||| |||||||||||||||||| | |||||||||||  |||||| ||||| |||||||||||||||| |||  ||||||||||||||    
T  27502486 aaaagctgcgtcaagcaaagtggtcaaacatgagaaaacgtgttccgacaaacaacatgcttttatacaattgctttttgacactttc 27502399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 47 - 107
Target Start/End: Original strand, 32029098 - 32029158
Alignment:
Q  47 atgagaaagtgtgttctgacaatcaacatgcttttataccatttgtttttgacactttcag 107  Q
    ||||||| |||||||| ||||||||||||||||| ||| ||||||||||||||||||||||    
T  32029098 atgagaatgtgtgttcagacaatcaacatgctttcatatcatttgtttttgacactttcag 32029158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 44 - 213
Target Start/End: Original strand, 11921219 - 11921398
Alignment:
Q  44 aacatgagaaagtgtgttctgacaatcaacatgcttttataccatttgtttttgacactttcagttttctagcaccagaggttgttgaacattcacatag 143  Q
    ||||| |||||  |||||||||||||||||||  ||||||||| ||||||||| | ||||||| |||||| | | || ||  |||||| | |  ||||||    
T  11921219 aacattagaaaacgtgttctgacaatcaacatatttttataccgtttgttttttatactttcaattttctggtatcatagactgttgaccttctacatag 11921318  T
Q  144 agttcaaatg----------tcatgtctcctaggtccatgaatgttgtgtttacgatgattagttttgccatccaaaaag 213  Q
    |||||||| |          | || ||| ||||||||||||||||||||||||| | ||||||||| |||||||||||||    
T  11921319 agttcaaagggttatcaattttatatcttctaggtccatgaatgttgtgtttactaggattagtttcgccatccaaaaag 11921398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 44 - 131
Target Start/End: Original strand, 33612556 - 33612643
Alignment:
Q  44 aacatgagaaagtgtgttctgacaatcaacatgcttttataccatttgtttttgacactttcagttttctagcaccagaggttgttga 131  Q
    |||||||||||  ||||| |||||||||||||| |||||||| |||||| |||||||||||  | || ||| |||| |||||||||||    
T  33612556 aacatgagaaaacgtgttttgacaatcaacatgattttatacaatttgtatttgacacttttggcttcctaacaccggaggttgttga 33612643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 27 - 131
Target Start/End: Complemental strand, 44686535 - 44686427
Alignment:
Q  27 gtcaagcaaagtggcccaacatgagaaagtgtgttctgacaa----tcaacatgcttttataccatttgtttttgacactttcagttttctagcaccaga 122  Q
    ||||||||| |||||| |||||||||||| ||||||||||||    ||||||||||||||||   || | ||||||||||||| | || |||||| ||||    
T  44686535 gtcaagcaatgtggccaaacatgagaaagcgtgttctgacaatcaatcaacatgcttttatattgttcgcttttgacactttcggcttcctagcatcaga 44686436  T
Q  123 ggttgttga 131  Q
    | |||||||    
T  44686435 gtttgttga 44686427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 18 - 96
Target Start/End: Original strand, 1296033 - 1296111
Alignment:
Q  18 aaaacctgcgtcaagcaaagtggcccaacatgagaaagtgtgttctgacaatcaacatgcttttataccatttgttttt 96  Q
    |||| ||||||||| |||| ||||| ||||||||||| | |||||||||||| |||||| ||||||||| ||| |||||    
T  1296033 aaaagctgcgtcaaacaaaatggccaaacatgagaaaatatgttctgacaataaacatgtttttatacctttttttttt 1296111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 18 - 131
Target Start/End: Complemental strand, 3825851 - 3825737
Alignment:
Q  18 aaaacctgcgtcaagcaaagtggcccaacatgagaaagtgtgtt-ctgacaatcaacatgcttttataccatttgtttttgacactttcagttttctagc 116  Q
    |||| |||||||||||||||||| | ||||||| ||||| | || ||||||||| ||||| ||||||  |||||| ||  |||||||||| ||| |||||    
T  3825851 aaaagctgcgtcaagcaaagtggtcaaacatgaaaaagttttttcctgacaatctacatgtttttatttcatttgcttcagacactttcaatttcctagc 3825752  T
Q  117 accagaggttgttga 131  Q
    | || ||||||||||    
T  3825751 atcaaaggttgttga 3825737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 150 - 220
Target Start/End: Complemental strand, 27494287 - 27494217
Alignment:
Q  150 aatgtcatgtctcctaggtccatgaatgttgtgtttacgatgattagttttgccatccaaaaaggtttaac 220  Q
    ||||| |||||||||| ||| |||||| ||||||||||||  ||| |||||||||||||||||||| ||||    
T  27494287 aatgttatgtctcctaagtctatgaatattgtgtttacgaatattggttttgccatccaaaaaggtctaac 27494217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 150 - 215
Target Start/End: Original strand, 18745085 - 18745150
Alignment:
Q  150 aatgtcatgtctcctaggtccatgaatgttgtgtttacgatgattagttttgccatccaaaaaggt 215  Q
    |||||||| | ||||||||| ||||||||||||||||  | |||| ||||||||||||||||||||    
T  18745085 aatgtcatatttcctaggtctatgaatgttgtgtttataaggattggttttgccatccaaaaaggt 18745150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 154 - 215
Target Start/End: Complemental strand, 27502334 - 27502273
Alignment:
Q  154 tcatgtctcctaggtccatgaatgttgtgtttacgatgattagttttgccatccaaaaaggt 215  Q
    ||||||||||||| || ||||||||||||||||||| ||||  |||||| ||||||||||||    
T  27502334 tcatgtctcctagatctatgaatgttgtgtttacgaagattgattttgcaatccaaaaaggt 27502273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 150 - 209
Target Start/End: Complemental strand, 24765237 - 24765178
Alignment:
Q  150 aatgtcatgtctcctaggtccatgaatgttgtgtttacgatgattagttttgccatccaa 209  Q
    ||||||||||||| |||||||||||||||| || ||| |||||||| ||||| |||||||    
T  24765237 aatgtcatgtctcttaggtccatgaatgttctggttatgatgattaattttggcatccaa 24765178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 85 - 151
Target Start/End: Complemental strand, 13413408 - 13413342
Alignment:
Q  85 ccatttgtttttgacactttcagttttctagcaccagaggttgttgaacattcacatagagttcaaa 151  Q
    ||||||||||||||||||||| |||||| |||| |||||| |||||| | |  ||||||||||||||    
T  13413408 ccatttgtttttgacactttcggttttcaagcagcagaggctgttgaccttctacatagagttcaaa 13413342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 158 - 212
Target Start/End: Original strand, 15515286 - 15515340
Alignment:
Q  158 gtctcctaggtccatgaatgttgtgtttacgatgattagttttgccatccaaaaa 212  Q
    ||||||||||||||  ||||||||||| |||| |||| |||||||||||||||||    
T  15515286 gtctcctaggtccaccaatgttgtgttcacgaggattggttttgccatccaaaaa 15515340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 150 - 212
Target Start/End: Original strand, 16351975 - 16352037
Alignment:
Q  150 aatgtcatgtctcctaggtccatgaatgttgtgtttacgatgattagttttgccatccaaaaa 212  Q
    ||||||||||||| ||||| ||||||| || ||||||||||||||  |||||||||| |||||    
T  16351975 aatgtcatgtctcttaggtacatgaatattatgtttacgatgattgtttttgccatctaaaaa 16352037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 27 - 84
Target Start/End: Original strand, 16351833 - 16351890
Alignment:
Q  27 gtcaagcaaagtggcccaacatgagaaagtgtgttctgacaatcaacatgcttttata 84  Q
    |||||||||||||| | ||||||||||| |||||||| |||||||||||  |||||||    
T  16351833 gtcaagcaaagtggtcaaacatgagaaaatgtgttctcacaatcaacataattttata 16351890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 28 - 104
Target Start/End: Complemental strand, 5679392 - 5679316
Alignment:
Q  28 tcaagcaaagtggcccaacatgagaaagtgtgttctgacaatcaacatgcttttataccatttgtttttgacacttt 104  Q
    ||||||||||||||| |||||||||||   ||||  || ||||||||| |||| ||||||||| | |||||||||||    
T  5679392 tcaagcaaagtggccaaacatgagaaaacatgttaagataatcaacatcctttcataccatttatgtttgacacttt 5679316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 156 - 212
Target Start/End: Original strand, 23485073 - 23485129
Alignment:
Q  156 atgtctcctaggtccatgaatgttgtgtttacgatgattagttttgccatccaaaaa 212  Q
    |||||||||||||||||||| ||||||||||| |  ||| ||||||||| |||||||    
T  23485073 atgtctcctaggtccatgaacgttgtgtttacaaaaattggttttgccaaccaaaaa 23485129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 150 - 194
Target Start/End: Complemental strand, 44686392 - 44686348
Alignment:
Q  150 aatgtcatgtctcctaggtccatgaatgttgtgtttacgatgatt 194  Q
    ||||| ||||||||||||||| |||||||||||||||||| ||||    
T  44686392 aatgttatgtctcctaggtccgtgaatgttgtgtttacgaggatt 44686348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 162 - 213
Target Start/End: Original strand, 10296669 - 10296720
Alignment:
Q  162 cctaggtccatgaatgttgtgtttacgatgattagttttgccatccaaaaag 213  Q
    |||| ||||||| |||||| ||||| || |||||||||||||||||||||||    
T  10296669 cctaagtccatggatgttgcgtttaagaggattagttttgccatccaaaaag 10296720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 150 - 213
Target Start/End: Original strand, 19161914 - 19161977
Alignment:
Q  150 aatgtcatgtctcctaggtccatgaatgttgtgtttacgatgattagttttgccatccaaaaag 213  Q
    |||||||||||||||||||| ||||||  ||||||| ||| ||||  ||||| |||||||||||    
T  19161914 aatgtcatgtctcctaggtcaatgaatagtgtgttttcgaggattgattttgtcatccaaaaag 19161977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 150 - 209
Target Start/End: Original strand, 24762918 - 24762977
Alignment:
Q  150 aatgtcatgtctcctaggtccatgaatgttgtgtttacgatgattagttttgccatccaa 209  Q
    ||||||||||||| ||||||||||| |||| || ||| |||||||| ||||| |||||||    
T  24762918 aatgtcatgtctcttaggtccatgagtgttctggttatgatgattaattttggcatccaa 24762977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 164 - 218
Target Start/End: Original strand, 26407839 - 26407893
Alignment:
Q  164 taggtccatgaatgttgtgtttacgatgattagttttgccatccaaaaaggttta 218  Q
    ||||| |||||||||||||||||||||||||  |||||| |||| |||| |||||    
T  26407839 taggttcatgaatgttgtgtttacgatgattgattttgctatcctaaaatgttta 26407893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 181 - 218
Target Start/End: Original strand, 3208406 - 3208443
Alignment:
Q  181 tgtttacgatgattagttttgccatccaaaaaggttta 218  Q
    ||||||||| |||| |||||||||||||||||||||||    
T  3208406 tgtttacgaggattggttttgccatccaaaaaggttta 3208443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 100
Target Start/End: Original strand, 3968402 - 3968474
Alignment:
Q  28 tcaagcaaagtggcccaacatgagaaagtgtgttctgacaatcaacatgcttttataccatttgtttttgaca 100  Q
    ||||||||||||| | || ||||||||   |||| |||||||||| |||||||||||| |||||  |||||||    
T  3968402 tcaagcaaagtggtcaaatatgagaaaacatgttttgacaatcaatatgcttttatacaatttgcgtttgaca 3968474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0490 (Bit Score: 84; Significance: 5e-40; HSPs: 2)
Name: scaffold0490
Description:

Target: scaffold0490; HSP #1
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 24 - 151
Target Start/End: Complemental strand, 6452 - 6325
Alignment:
Q  24 tgcgtcaagcaaagtggcccaacatgagaaagtgtgttctgacaatcaacatgcttttataccatttgtttttgacactttcagttttctagcaccagag 123  Q
    ||||||||| ||||||||| |||||||||||| ||||||||||||||||||||||| ||||||||||| |||||||||||||||||| ||||||||||||    
T  6452 tgcgtcaagtaaagtggccaaacatgagaaagcgtgttctgacaatcaacatgcttctataccatttgcttttgacactttcagtttcctagcaccagag 6353  T
Q  124 gttgttgaacattcacatagagttcaaa 151  Q
    | |||||| | |  ||||||||||||||    
T  6352 gctgttgaccttctacatagagttcaaa 6325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0490; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 150 - 181
Target Start/End: Complemental strand, 6310 - 6279
Alignment:
Q  150 aatgtcatgtctcctaggtccatgaatgttgt 181  Q
    ||||||||||||||||||||||||||||||||    
T  6310 aatgtcatgtctcctaggtccatgaatgttgt 6279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 84; Significance: 5e-40; HSPs: 43)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 24 - 212
Target Start/End: Complemental strand, 34644684 - 34644480
Alignment:
Q  24 tgcgtcaagcaaagtggcccaacatgagaaagtgtgttctgacaatcaacatgcttttataccatttgtttttgacactttcagttttctagcaccagag 123  Q
    |||||||| |||||||||| |||||||||||| |||||||||||| | |||||||||||||||||||||||||||||||||| | || |||||| |||||    
T  34644684 tgcgtcaaacaaagtggccaaacatgagaaagcgtgttctgacaacctacatgcttttataccatttgtttttgacactttcggcttcctagcatcagag 34644585  T
Q  124 gttgttgaacattcacatagagttca----------------aatgtcatgtctcctaggtccatgaatgttgtgtttacgatgattagttttgccatcc 207  Q
    |||||||| | |  ||||||||| ||                ||||| |||||||||||||||||||||||||||||||||||||||  |||||||||||    
T  34644584 gttgttgaccttctacatagagtccaaagggttatgcatatcaatgttatgtctcctaggtccatgaatgttgtgtttacgatgattgattttgccatcc 34644485  T
Q  208 aaaaa 212  Q
    |||||    
T  34644484 aaaaa 34644480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 24 - 215
Target Start/End: Complemental strand, 21473121 - 21472914
Alignment:
Q  24 tgcgtcaagcaaagtggcccaacatgagaaagtgtgttctgacaatcaacatgcttttataccatttgtttttgacactttcagttttctagcaccagag 123  Q
    ||||||||| ||| ||||| |||||||||||| |||||||||||||||||||| |||||||||||||| ||||||||||| |||||| ||||||||||||    
T  21473121 tgcgtcaagtaaaatggccaaacatgagaaagcgtgttctgacaatcaacatgtttttataccatttgcttttgacacttgcagtttcctagcaccagag 21473022  T
Q  124 gttgttgaacattcacatagagttca----------------aatgtcatgtctcctaggtccatgaatgttgtgtttacgatgattagttttgccatcc 207  Q
    | |||||| | |  ||||||||||||                ||||||||||||||||||||||||||||||| ||| | || || | ||||||||||||    
T  21473021 gctgttgaccttctacatagagttcaaaaggtcatgcatagcaatgtcatgtctcctaggtccatgaatgttgcgttcaggaggactggttttgccatcc 21472922  T
Q  208 aaaaaggt 215  Q
    ||||||||    
T  21472921 aaaaaggt 21472914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 27 - 215
Target Start/End: Complemental strand, 22347010 - 22346806
Alignment:
Q  27 gtcaagcaaagtggcccaacatgagaaagtgtgttctgacaatcaacatgcttttataccatttgtttttgacactttcagttttctagcaccagaggtt 126  Q
    |||||||||||||||| || ||||||||| ||||||||||||||||||||| |||||||| |||| ||||||||||||| |||| |||| | ||||||||    
T  22347010 gtcaagcaaagtggccaaatatgagaaagcgtgttctgacaatcaacatgcgtttataccttttgcttttgacactttcggtttcctagtagcagaggtt 22346911  T
Q  127 gttgaacattcacatagagttc----------------aaatgtcatgtctcctaggtccatgaatgttgtgtttacgatgattagttttgccatccaaa 210  Q
    ||||| | |  ||| |||||||                ||||||||||||||||||||  |||||||||||||| |||| ||||||||||||||||||||    
T  22346910 gttgaccttctacacagagttcaaaaggtcatgcatagaaatgtcatgtctcctaggtttatgaatgttgtgttcacgaggattagttttgccatccaaa 22346811  T
Q  211 aaggt 215  Q
    |||||    
T  22346810 aaggt 22346806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 18 - 124
Target Start/End: Complemental strand, 19035571 - 19035465
Alignment:
Q  18 aaaacctgcgtcaagcaaagtggcccaacatgagaaagtgtgttctgacaatcaacatgcttttataccatttgtttttgacactttcagttttctagca 117  Q
    |||| |||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||  ||||||||||| | |||| ||||||    
T  19035571 aaaagctgcgtcaagcaaagtggccaaacatgagaaagcgtgttctgacaatcaacatgcttttataccatttacttttgacacttacggtttcctagca 19035472  T
Q  118 ccagagg 124  Q
    |||||||    
T  19035471 ccagagg 19035465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 25 - 151
Target Start/End: Original strand, 28041117 - 28041243
Alignment:
Q  25 gcgtcaagcaaagtggcccaacatgagaaagtgtgttctgacaatcaacatgcttttataccatttgtttttgacactttcagttttctagcaccagagg 124  Q
    ||||||| |||||||||| ||||||||||||||||||||||||||||||| | |||||||||||||| ||||||||||||| |||| |||||||||||||    
T  28041117 gcgtcaaacaaagtggccaaacatgagaaagtgtgttctgacaatcaacaggtttttataccatttgcttttgacactttcggtttcctagcaccagagg 28041216  T
Q  125 ttgttgaacattcacatagagttcaaa 151  Q
      ||||| | |  ||||||||||||||    
T  28041217 cggttgaccttctacatagagttcaaa 28041243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 27 - 151
Target Start/End: Original strand, 29169785 - 29169909
Alignment:
Q  27 gtcaagcaaagtggcccaacatgagaaagtgtgttctgacaatcaacatgcttttataccatttgtttttgacactttcagttttctagcaccagaggtt 126  Q
    |||||| || |||||| |||| ||||||  ||||||||||||||||||||||||||||||||||| ||||||||||||| |||| |||||||||||||||    
T  29169785 gtcaagtaaggtggccaaacacgagaaaacgtgttctgacaatcaacatgcttttataccatttgcttttgacactttcggtttcctagcaccagaggtt 29169884  T
Q  127 gttgaacattc-acatagagttcaaa 151  Q
    ||| ||| ||| ||||||||||||||    
T  29169885 gtt-aaccttctacatagagttcaaa 29169909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 25 - 151
Target Start/End: Original strand, 31737313 - 31737439
Alignment:
Q  25 gcgtcaagcaaagtggcccaacatgagaaagtgtgttctgacaatcaacatgcttttataccatttgtttttgacactttcagttttctagcaccagagg 124  Q
    |||||||||||||||||| |||||||||||   | ||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||  |||||    
T  31737313 gcgtcaagcaaagtggccaaacatgagaaaacatattctgacaatcaacatgcttttataccatttgtttttgacactttcgattttctagcattagagg 31737412  T
Q  125 ttgttgaacattc-acatagagttcaaa 151  Q
     | ||| |||||| ||||||||||||||    
T  31737413 ctattg-acattctacatagagttcaaa 31737439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 26 - 151
Target Start/End: Original strand, 20259788 - 20259913
Alignment:
Q  26 cgtcaagcaaagtggcccaacatgagaaagtgtgttctgacaatcaacatgcttttataccatttgtttttgacactttcagttttctagcaccagaggt 125  Q
    |||||||||||||||   || ||||||||| |||||||||||||||||||| ||||||||||||| || ||||||||||| ||||  |||||||||||||    
T  20259788 cgtcaagcaaagtggttaaaaatgagaaagcgtgttctgacaatcaacatgtttttataccatttattgttgacactttcggtttcttagcaccagaggt 20259887  T
Q  126 tgttgaacattcacatagagttcaaa 151  Q
    |||||| | |  ||||||||||||||    
T  20259888 tgttgaccttctacatagagttcaaa 20259913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 18 - 131
Target Start/End: Original strand, 45659631 - 45659744
Alignment:
Q  18 aaaacctgcgtcaagcaaagtggcccaacatgagaaagtgtgttctgacaatcaacatgcttttataccatttgtttttgacactttcagttttctagca 117  Q
    |||| |||||||||| || |||||| |||| ||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||  ||| ||| ||    
T  45659631 aaaagctgcgtcaagtaaggtggccaaacacgagaaagcgtgttctgacaatcaacatgcttttataccatttgcttttgacactttcgatttcctatca 45659730  T
Q  118 ccagaggttgttga 131  Q
    ||||||| ||||||    
T  45659731 ccagaggctgttga 45659744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 28 - 151
Target Start/End: Complemental strand, 2898819 - 2898693
Alignment:
Q  28 tcaagcaaagtggcccaacatgagaaagtg----tgttctgacaatcaacatgcttttataccatttgtttttgacactttcagttttctagcaccagag 123  Q
    ||||||||||||||| ||||||||||||||    ||||||||||||||| | | |||||||||||||| |||||| |||||| |||| ||||||||||||    
T  2898819 tcaagcaaagtggccaaacatgagaaagtgagcgtgttctgacaatcaata-gtttttataccatttgcttttgatactttcggtttcctagcaccagag 2898721  T
Q  124 gttgttgaacattcacatagagttcaaa 151  Q
    |||||||| | |  ||||||||||||||    
T  2898720 gttgttgaccttctacatagagttcaaa 2898693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 33 - 218
Target Start/End: Complemental strand, 2764588 - 2764387
Alignment:
Q  33 caaagtggcccaacatgagaaagtgtgttctgacaatcaacatgcttttataccatttgtttttgacactttcagttttctagcaccagaggttgttgaa 132  Q
    |||||||| | |||||||||||  |||||| |||||||||||||||||||| ||||||  ||||||||||||||| || |||||| |||||||||||||     
T  2764588 caaagtggtcaaacatgagaaaacgtgttccgacaatcaacatgcttttatgccattttcttttgacactttcagcttcctagcatcagaggttgttgac 2764489  T
Q  133 cattcacatagagttca----------------aatgtcatgtctcctaggtccatgaatgttgtgtttacgatgattagttttgccatccaaaaaggtt 216  Q
    | |  ||||| ||| ||                ||||| ||||||| ||||||||| |||||||||||||||||||||  |||| |||||||||||||||    
T  2764488 cttctacataaagtccaaagggttatgcaaatcaatgttatgtctcttaggtccataaatgttgtgtttacgatgattgattttaccatccaaaaaggtt 2764389  T
Q  217 ta 218  Q
    ||    
T  2764388 ta 2764387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 50 - 215
Target Start/End: Original strand, 24177526 - 24177707
Alignment:
Q  50 agaaagtgtgttctgacaatcaacatgcttttataccatttgtttttgacactttcagttttctagcaccagaggttgttgaacattcacatagagttca 149  Q
    ||||||||||| | ||||||||||||  ||||||||||||||||||||||| |||| |||| |||||| |||||| |||| | | |  ||||||||||||    
T  24177526 agaaagtgtgtaccgacaatcaacatatttttataccatttgtttttgacagtttcggtttcctagcatcagaggctgtttaccttctacatagagttca 24177625  T
Q  150 ----------------aatgtcatgtctcctaggtccatgaatgttgtgtttacgatgattagttttgccatccaaaaaggt 215  Q
                    |||||||| |||||||||||||||||||||||||| |||| |||| ||||||||| ||||||||||    
T  24177626 aaaagtcatgcatagcaatgtcatatctcctaggtccatgaatgttgtgttcacgaggattggttttgccaaccaaaaaggt 24177707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 24 - 96
Target Start/End: Original strand, 50161406 - 50161478
Alignment:
Q  24 tgcgtcaagcaaagtggcccaacatgagaaagtgtgttctgacaatcaacatgcttttataccatttgttttt 96  Q
    ||||||||||||||||| | |||||||||||| ||||||| |||||||||||||||||||| ||||| |||||    
T  50161406 tgcgtcaagcaaagtggacaaacatgagaaagcgtgttctcacaatcaacatgcttttatatcattttttttt 50161478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 24 - 151
Target Start/End: Original strand, 4861978 - 4862105
Alignment:
Q  24 tgcgtcaagcaaagtggcccaacatgagaaagtgtgttctgacaatcaacatgcttttataccatttgtttttgacactttcagttttctagcaccagag 123  Q
    ||||||||| ||| ||| | |||||||||||| || ||||||||| |||||| ||||||||| ||||| |||||||||||||  ||| ||| ||||| |     
T  4861978 tgcgtcaagtaaaatggtcaaacatgagaaagcgtcttctgacaagcaacatacttttatacaatttgcttttgacactttcgatttcctaacaccaaaa 4862077  T
Q  124 gttgttgaacattcacatagagttcaaa 151  Q
    |||||||| | |  ||||||||||||||    
T  4862078 gttgttgaccttctacatagagttcaaa 4862105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 154 - 227
Target Start/End: Complemental strand, 4611161 - 4611088
Alignment:
Q  154 tcatgtctcctaggtccatgaatgttgtgtttacgatgattagttttgccatccaaaaaggtttaactgcacag 227  Q
    ||||||||||||||||||||||| ||||||| |||||||||  ||||| ||||||||||||| |||| ||||||    
T  4611161 tcatgtctcctaggtccatgaatattgtgttcacgatgattgattttgtcatccaaaaaggtctaacagcacag 4611088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 47 - 151
Target Start/End: Complemental strand, 38731704 - 38731600
Alignment:
Q  47 atgagaaagtgtgttctgacaatcaacatgcttttataccatttgtttttgacactttcagttttctagcaccagaggttgttgaacattc-acatagag 145  Q
    ||||||||| ||||||||||||||||||| ||||||||| ||||| |||||| |||||  | ||  ||||||||||||||||| ||| ||| ||||||||    
T  38731704 atgagaaagcgtgttctgacaatcaacatacttttatacaatttgcttttgaaacttttggcttcttagcaccagaggttgtt-aaccttctacatagag 38731606  T
Q  146 ttcaaa 151  Q
    ||||||    
T  38731605 ttcaaa 38731600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 28 - 85
Target Start/End: Original strand, 35387653 - 35387710
Alignment:
Q  28 tcaagcaaagtggcccaacatgagaaagtgtgttctgacaatcaacatgcttttatac 85  Q
    ||||||||||||||| ||||||| ||||||||||||||| ||||||| ||||||||||    
T  35387653 tcaagcaaagtggccaaacatgaaaaagtgtgttctgacgatcaacaagcttttatac 35387710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 150 - 214
Target Start/End: Complemental strand, 30688533 - 30688469
Alignment:
Q  150 aatgtcatgtctcctaggtccatgaatgttgtgtttacgatgattagttttgccatccaaaaagg 214  Q
    ||||||||| ||||| |||||||||||||||||||||||| |||| ||||||  |||||||||||    
T  30688533 aatgtcatgactcctgggtccatgaatgttgtgtttacgaggattggttttgttatccaaaaagg 30688469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 174 - 227
Target Start/End: Original strand, 1114023 - 1114076
Alignment:
Q  174 aatgttgtgtttacgatgattagttttgccatccaaaaaggtttaactgcacag 227  Q
    |||||||||||||||| |||| |||||||||||||||||||| |||| ||||||    
T  1114023 aatgttgtgtttacgaggattggttttgccatccaaaaaggtctaacggcacag 1114076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 152 - 213
Target Start/End: Original strand, 45835319 - 45835380
Alignment:
Q  152 tgtcatgtctcctaggtccatgaatgttgtgtttacgatgattagttttgccatccaaaaag 213  Q
    |||||| ||| ||||||| ||||||||||||||||||| ||||  |||||||||||||||||    
T  45835319 tgtcatctcttctaggtctatgaatgttgtgtttacgaggattgattttgccatccaaaaag 45835380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 24 - 104
Target Start/End: Original strand, 25375822 - 25375902
Alignment:
Q  24 tgcgtcaagcaaagtggcccaacatgagaaagtgtgttctgacaatcaacatgcttttataccatttgtttttgacacttt 104  Q
    |||||||||||||||| || ||||||| |||   |||||| || ||||||||| |||||||||||||| | ||||||||||    
T  25375822 tgcgtcaagcaaagtgaccaaacatgacaaaacatgttcttaccatcaacatgtttttataccatttgctattgacacttt 25375902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 164 - 215
Target Start/End: Complemental strand, 5454057 - 5454006
Alignment:
Q  164 taggtccatgaatgttgtgtttacgatgattagttttgccatccaaaaaggt 215  Q
    |||||||||||||||||||||||| | |||| |||||| |||||||||||||    
T  5454057 taggtccatgaatgttgtgtttacaaggattggttttgtcatccaaaaaggt 5454006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 171 - 214
Target Start/End: Complemental strand, 7483839 - 7483796
Alignment:
Q  171 atgaatgttgtgtttacgatgattagttttgccatccaaaaagg 214  Q
    ||||||||||||||||||| |||||||||||||||| |||||||    
T  7483839 atgaatgttgtgtttacgaagattagttttgccatctaaaaagg 7483796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 150 - 215
Target Start/End: Original strand, 868534 - 868597
Alignment:
Q  150 aatgtcatgtctcctaggtccatgaatgttgtgtttacgatgattagttttgccatccaaaaaggt 215  Q
    |||||||||||||||| |||||||||  ||||||| || | |||| ||||||||||||||||||||    
T  868534 aatgtcatgtctcctaagtccatgaa--ttgtgttcacaaggattggttttgccatccaaaaaggt 868597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 150 - 212
Target Start/End: Original strand, 6670236 - 6670298
Alignment:
Q  150 aatgtcatgtctcctaggtccatgaatgttgtgtttacgatgattagttttgccatccaaaaa 212  Q
    |||||||| |||||||| | |||||||||| | |||||||| |||| ||||||||||||||||    
T  6670236 aatgtcatatctcctagattcatgaatgttatatttacgataattaattttgccatccaaaaa 6670298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 42 - 131
Target Start/End: Original strand, 18616160 - 18616249
Alignment:
Q  42 ccaacatgagaaagtgtgttctgacaatcaacatgc-ttttataccatttgtttttgacactttcagttttctagcaccagaggttgttga 131  Q
    |||||||||||||  |||||| || ||||||||||  ||||||||||||||||||| ||||||||   ||||||||||| |||| ||||||    
T  18616160 ccaacatgagaaaacgtgttc-gataatcaacatgtgttttataccatttgtttttaacactttcgactttctagcacccgaggctgttga 18616249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 30 - 100
Target Start/End: Original strand, 50314619 - 50314689
Alignment:
Q  30 aagcaaagtggcccaacatgagaaagtgtgttctgacaatcaacatgcttttataccatttgtttttgaca 100  Q
    ||||||||||| | ||||||| |||   |||||| ||||||||||||||||||||||||||  ||||||||    
T  50314619 aagcaaagtggtcaaacatgacaaaacttgttctcacaatcaacatgcttttataccatttacttttgaca 50314689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 47 - 100
Target Start/End: Complemental strand, 23993531 - 23993478
Alignment:
Q  47 atgagaaagtgtgttctgacaatcaacatgcttttataccatttgtttttgaca 100  Q
    |||||||||||| ||| ||||||||||||| |||||||| |||| |||||||||    
T  23993531 atgagaaagtgtattccgacaatcaacatgtttttatacgatttatttttgaca 23993478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 150 - 189
Target Start/End: Complemental strand, 7213226 - 7213187
Alignment:
Q  150 aatgtcatgtctcctaggtccatgaatgttgtgtttacga 189  Q
    |||||||||||| |||||||||||||||||||||| ||||    
T  7213226 aatgtcatgtcttctaggtccatgaatgttgtgttcacga 7213187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 23 - 90
Target Start/End: Complemental strand, 23043996 - 23043929
Alignment:
Q  23 ctgcgtcaagcaaagtggcccaacatgagaaagtgtgttctgacaatcaacatgcttttataccattt 90  Q
    |||| ||||||||||||||| || ||||||||    || || ||||||||||||||||||||||||||    
T  23043996 ctgcatcaagcaaagtggccaaatatgagaaaacaagtactcacaatcaacatgcttttataccattt 23043929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 157 - 220
Target Start/End: Original strand, 29170322 - 29170385
Alignment:
Q  157 tgtctcctaggtccatgaatgttgtgtttacgatgattagttttgccatccaaaaaggtttaac 220  Q
    |||||||||||||||||||||||| |||||| |  ||| ||||||||||  |||||||| ||||    
T  29170322 tgtctcctaggtccatgaatgttgcgtttacaacaatttgttttgccatttaaaaaggtctaac 29170385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 150 - 189
Target Start/End: Complemental strand, 38731585 - 38731546
Alignment:
Q  150 aatgtcatgtctcctaggtccatgaatgttgtgtttacga 189  Q
    ||||||||| ||||||||||||||||| ||||||||||||    
T  38731585 aatgtcatgactcctaggtccatgaatattgtgtttacga 38731546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 157 - 214
Target Start/End: Complemental strand, 21934347 - 21934289
Alignment:
Q  157 tgtctcctaggtccatgaatgtt-gtgtttacgatgattagttttgccatccaaaaagg 214  Q
    |||||||||| |||||||||||| || |||| || |||| |||||||||||||||||||    
T  21934347 tgtctcctagttccatgaatgtttgtatttaagaggattggttttgccatccaaaaagg 21934289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 165 - 215
Target Start/End: Original strand, 28493477 - 28493527
Alignment:
Q  165 aggtccatgaatgttgtgtttacgatgattagttttgccatccaaaaaggt 215  Q
    ||||||||||||||| |||| |||| ||||  |||||||||||||||||||    
T  28493477 aggtccatgaatgttatgttcacgaggattgattttgccatccaaaaaggt 28493527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 122
Target Start/End: Complemental strand, 36487000 - 36486906
Alignment:
Q  28 tcaagcaaagtggcccaacatgagaaagtgtgttctgacaatcaacatgcttttataccatttgtttttgacactttcagttttctagcaccaga 122  Q
    ||||| ||||||| | || ||||||||| ||||| |||||||||| ||  |||||||  ||||| ||||||||||||  ||||| || |||||||    
T  36487000 tcaagtaaagtggtcaaatatgagaaagcgtgttttgacaatcaatatctttttatataatttgcttttgacacttttggttttttatcaccaga 36486906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 96
Target Start/End: Complemental strand, 37200098 - 37200028
Alignment:
Q  26 cgtcaagcaaagtggcccaacatgagaaagtgtgttctgacaatcaacatgcttttataccatttgttttt 96  Q
    ||||||| ||||||| | ||||| ||||||  ||| || |||||||| ||| |||||||||||||||||||    
T  37200098 cgtcaagtaaagtggtcaaacataagaaagcatgtgctaacaatcaatatgtttttataccatttgttttt 37200028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 150 - 211
Target Start/End: Original strand, 11128385 - 11128446
Alignment:
Q  150 aatgtcatgtctcctaggtccatgaatgttgtgtttacgatgattagttttgccatccaaaa 211  Q
    ||||| |||||||||||||| || |||| ||||||||| |||||| ||||| | ||||||||    
T  11128385 aatgttatgtctcctaggtctataaatgatgtgtttacaatgatttgtttttctatccaaaa 11128446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 150 - 215
Target Start/End: Original strand, 45659777 - 45659842
Alignment:
Q  150 aatgtcatgtctcctaggtccatgaatgttgtgtttacgatgattagttttgccatccaaaaaggt 215  Q
    |||||||||||||||||||| || ||||| |||||||||| ||   |||||| || ||||||||||    
T  45659777 aatgtcatgtctcctaggtcaataaatgtcgtgtttacgaggaccggttttgtcacccaaaaaggt 45659842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 170 - 214
Target Start/End: Complemental strand, 2898658 - 2898614
Alignment:
Q  170 catgaatgttgtgtttacgatgattagttttgccatccaaaaagg 214  Q
    ||||||||||||||||| || ||||  ||||||||||||||||||    
T  2898658 catgaatgttgtgtttaagaggattgattttgccatccaaaaagg 2898614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 104
Target Start/End: Complemental strand, 16500152 - 16500072
Alignment:
Q  24 tgcgtcaagcaaagtggcccaacatgagaaagtgtgttctgacaatcaacatgcttttataccatttgtttttgacacttt 104  Q
    ||||||| | ||||||||| || || |||||   |||||| ||||| ||||||| ||||||| ||||| ||||||||||||    
T  16500152 tgcgtcacgtaaagtggccaaatataagaaaacatgttctaacaattaacatgcctttatactatttgcttttgacacttt 16500072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 214
Target Start/End: Original strand, 31737454 - 31737517
Alignment:
Q  150 aatgtcatgtctcctaggtccatgaatgttgtgtttacgatgattagttttgccatccaaaaagg 214  Q
    ||||| |||| |||||| ||||||||| | |||||||||| ||||  ||||||||||||||||||    
T  31737454 aatgttatgtttcctagatccatgaat-tagtgtttacgaggattgattttgccatccaaaaagg 31737517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 131
Target Start/End: Original strand, 37932210 - 37932313
Alignment:
Q  27 gtcaagcaaagtggcccaacatgagaaagtgtgttctgacaatcaacatgcttttataccatttgtttttgacactttcagttttctagcaccagaggtt 126  Q
    |||||||||| ||| | || | ||||||| ||||||||||||||||| || ||||| |  |||  ||||| |||||||| | || ||||||||||||| |    
T  37932210 gtcaagcaaaatggtcaaatacgagaaag-gtgttctgacaatcaacgtgtttttacattattatttttttacactttcggcttcctagcaccagaggat 37932308  T
Q  127 gttga 131  Q
    |||||    
T  37932309 gttga 37932313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 104
Target Start/End: Complemental strand, 42919973 - 42919898
Alignment:
Q  28 tcaagcaaagtggcccaacatgagaaagtgtgttctgacaatcaacatgcttttataccatttgtttttgacacttt 104  Q
    |||| ||||| |||| |||||||||||  ||||||| |||||||||||| ||||||  ||| || ||||||||||||    
T  42919973 tcaaacaaagcggccaaacatgagaaac-gtgttctcacaatcaacatgtttttatgtcatctgcttttgacacttt 42919898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 81; Significance: 3e-38; HSPs: 55)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 27 - 212
Target Start/End: Original strand, 600684 - 600885
Alignment:
Q  27 gtcaagcaaagtggcccaacatgagaaagtgtgttctgacaatcaacatgcttttataccatttgtttttgacactttcagttttctagcaccagaggtt 126  Q
    ||||||||||||| || |||||||||||  ||||||| ||||| ||||||||||||||||||||| ||||| ||||||| |||| ||| |||||||||||    
T  600684 gtcaagcaaagtgaccaaacatgagaaaacgtgttctaacaattaacatgcttttataccatttgcttttgtcactttcggtttcctaacaccagaggtt 600783  T
Q  127 gttgaacattcacatagagttcaa----------------atgtcatgtctcctaggtccatgaatgttgtgtttacgatgattagttttgccatccaaa 210  Q
    ||||| | |  |||||||||||||                |||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||    
T  600784 gttgaccttctacatagagttcaaaaggtcatgtataactatgtcatgtctcctaggtccattaatgctgtgtttacgatgattagttttgccatccaaa 600883  T
Q  211 aa 212  Q
    ||    
T  600884 aa 600885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 18 - 104
Target Start/End: Complemental strand, 53619710 - 53619624
Alignment:
Q  18 aaaacctgcgtcaagcaaagtggcccaacatgagaaagtgtgttctgacaatcaacatgcttttataccatttgtttttgacacttt 104  Q
    |||| |||||||||||||||||||| |||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||    
T  53619710 aaaagctgcgtcaagcaaagtggccaaacatgagaaaacgtgttctgacaatcaacatgcttttataccatttgtttttgacacttt 53619624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 24 - 227
Target Start/End: Original strand, 34107683 - 34107904
Alignment:
Q  24 tgcgtcaagcaaagtggcccaacatgagaaa--gtgtgttctgacaatcaacatgcttttataccatttgtttttgacactttcagttttctagcaccag 121  Q
    |||||||| | |||||||| |||||||||||  |||||||| || |||||||||| ||||||||||||||||||||||||||||  ||| ||||||||||    
T  34107683 tgcgtcaaacgaagtggccaaacatgagaaaacgtgtgttcagataatcaacatgtttttataccatttgtttttgacactttcgatttcctagcaccag 34107782  T
Q  122 aggttgttgaacattcacatagagttca----------------aatgtcatgtctcctaggtccatgaatgttgtgtttacgatgattagttttgccat 205  Q
    ||| |||||| | |  ||||||||||||                ||||| ||||||||||| ||||||||||||||||| |||| |||| |||||| |||    
T  34107783 aggctgttgaccttctacatagagttcaaaaagtcatgcataacaatgttatgtctcctagatccatgaatgttgtgttcacgaggattggttttgtcat 34107882  T
Q  206 ccaaaaaggtttaactgcacag 227  Q
    ||||||| ||||||| ||||||    
T  34107883 ccaaaaaagtttaacggcacag 34107904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 50 - 190
Target Start/End: Original strand, 50483211 - 50483352
Alignment:
Q  50 agaaagtgtgttctgacaatcaacatgcttttataccatttgtttttgacactttcagttttctagcaccagaggttgttgaacattcacatagagttc- 148  Q
    |||||| || ||||||||||||||||| |||||||||||||| ||| ||||||||| |||| |||||||||||||||||||| | |  |||||||||||     
T  50483211 agaaagcgtcttctgacaatcaacatgattttataccatttgctttcgacactttcggtttcctagcaccagaggttgttgaccttctacatagagttca 50483310  T
Q  149 aaatgtcatgtctcctaggtccatgaatgttgtgtttacgat 190  Q
    ||| |||||||| | |||||||||||||||||| || |||||    
T  50483311 aaaggtcatgtcacataggtccatgaatgttgtattcacgat 50483352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 24 - 151
Target Start/End: Original strand, 56462096 - 56462222
Alignment:
Q  24 tgcgtcaagcaaagtggcccaacatgagaaagtgtgttctgacaatcaacatgcttttataccatttgtttttgacactttcagttttctagcaccagag 123  Q
    |||||||| |||||||||  ||||||| |||| |||||||||||||||||||| |||||||||||||||||| ||||||||  |||| ||||||||||||    
T  56462096 tgcgtcaaacaaagtggca-aacatgataaagcgtgttctgacaatcaacatgtttttataccatttgttttagacacttttggtttcctagcaccagag 56462194  T
Q  124 gttgttgaacattcacatagagttcaaa 151  Q
    |||||||| | |  ||||||||||||||    
T  56462195 gttgttgaccttctacatagagttcaaa 56462222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 18 - 215
Target Start/End: Complemental strand, 31847211 - 31847014
Alignment:
Q  18 aaaacctgcgtcaagcaaagtggcccaacatgagaaagtgtgttctgacaatcaacatgcttttataccatttgtttttgacactttcagttttctagca 117  Q
    |||| |||||||||||||||||| | |||||||||||   |||||||||| |||||||| |||| ||||||||| ||||||||||||  | || ||||||    
T  31847211 aaaagctgcgtcaagcaaagtggtcaaacatgagaaaccatgttctgacagtcaacatgtttttttaccatttgcttttgacacttttggcttcctagca 31847112  T
Q  118 ccagaggttgttgaacattcacatagagttcaaatgtcatgtctcctaggtccatgaatgttgtgtttacgatgattagttttgccatccaaaaaggt 215  Q
     |||| |  ||||| | |  ||||||||| |||| |    |||||||||||||||||||||||||||  ||| |||| ||| ||||||||||||||||    
T  31847111 tcagaagcggttgaccttctacatagagtccaaacggttagtctcctaggtccatgaatgttgtgttagcgaggattcgttatgccatccaaaaaggt 31847014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 24 - 99
Target Start/End: Complemental strand, 23255822 - 23255747
Alignment:
Q  24 tgcgtcaagcaaagtggcccaacatgagaaagtgtgttctgacaatcaacatgcttttataccatttgtttttgac 99  Q
    ||||||||||||||||||| |||||||||||| ||||||||||||| |||||||||||||||||||||||||||||    
T  23255822 tgcgtcaagcaaagtggccaaacatgagaaagcgtgttctgacaattaacatgcttttataccatttgtttttgac 23255747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 18 - 131
Target Start/End: Complemental strand, 132509 - 132396
Alignment:
Q  18 aaaacctgcgtcaagcaaagtggcccaacatgagaaagtgtgttctgacaatcaacatgcttttataccatttgtttttgacactttcagttttctagca 117  Q
    |||| |||||||||||||| ||||  |||||||||||  |||||||||||||||||||||||||||||||||||||||| |||||||| |||| |||  |    
T  132509 aaaagctgcgtcaagcaaaatggcaaaacatgagaaatcgtgttctgacaatcaacatgcttttataccatttgttttttacactttcggtttcctaata 132410  T
Q  118 ccagaggttgttga 131  Q
     ||||| |||||||    
T  132409 tcagagattgttga 132396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 24 - 105
Target Start/End: Original strand, 55933451 - 55933532
Alignment:
Q  24 tgcgtcaagcaaagtggcccaacatgagaaagtgtgttctgacaatcaacatgcttttataccatttgtttttgacactttc 105  Q
    |||||||| |||||||||| ||||||||||||| |||||| ||||||||||||||||||||||||||| |||||||||||||    
T  55933451 tgcgtcaaacaaagtggccaaacatgagaaagtttgttctaacaatcaacatgcttttataccatttgcttttgacactttc 55933532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 57 - 153
Target Start/End: Original strand, 7536593 - 7536689
Alignment:
Q  57 gtgttctgacaatcaacatgcttttataccatttgtttttgacactttcagttttctagcaccagaggttgttgaacattcacatagagttcaaatg 153  Q
    ||||| |||||||||||||| |||||||| |||||||||||||| ||||||||| |||||||||||||||||||| | |  ||||||||||||||||    
T  7536593 gtgttttgacaatcaacatgtttttatacaatttgtttttgacaatttcagtttcctagcaccagaggttgttgaccttctacatagagttcaaatg 7536689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 18 - 124
Target Start/End: Original strand, 50000908 - 50001015
Alignment:
Q  18 aaaacctgcgtcaagcaaagtggcccaacatgagaaagtgtgttctgacaatcaacatgctttt-ataccatttgtttttgacactttcagttttctagc 116  Q
    |||| |||||||||||||||||| | |||||||||||| ||||||||||||||||||||||||| |||| ||||| ||||||||||||  | ||||||||    
T  50000908 aaaagctgcgtcaagcaaagtggtcaaacatgagaaagcgtgttctgacaatcaacatgcttttaatacaatttgcttttgacacttttggctttctagc 50001007  T
Q  117 accagagg 124  Q
    | ||||||    
T  50001008 atcagagg 50001015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 24 - 129
Target Start/End: Original strand, 30940728 - 30940832
Alignment:
Q  24 tgcgtcaagcaaagtggcccaacatgagaaagtgtgttctgacaatcaacatgcttttataccatttgtttttgacactttcagttttctagcaccagag 123  Q
    ||||||||| ||||||| | |||||||||||| ||||||||||||||||||||||||||||||| ||| |||||||||||||  ||| |||||||| |||    
T  30940728 tgcgtcaagtaaagtggtcaaacatgagaaagcgtgttctgacaatcaacatgcttttatacca-ttgcttttgacactttcgatttcctagcacctgag 30940826  T
Q  124 gttgtt 129  Q
    | ||||    
T  30940827 gctgtt 30940832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 31 - 115
Target Start/End: Complemental strand, 16957653 - 16957569
Alignment:
Q  31 agcaaagtggcccaacatgagaaagtgtgttctgacaatcaacatgcttttataccatttgtttttgacactttcagttttctag 115  Q
    |||||| || || |||||||||||||||| ||||| ||||||||||||| ||||||||||| |||||||||||||||||||||||    
T  16957653 agcaaaatgaccaaacatgagaaagtgtgctctgataatcaacatgcttatataccatttgcttttgacactttcagttttctag 16957569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 150 - 212
Target Start/End: Complemental strand, 4419239 - 4419177
Alignment:
Q  150 aatgtcatgtctcctaggtccatgaatgttgtgtttacgatgattagttttgccatccaaaaa 212  Q
    ||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  4419239 aatgttatgtctcctaggtccatgaatgttgtgtttacgatgattggttttgccatccaaaaa 4419177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 150 - 215
Target Start/End: Complemental strand, 3329972 - 3329907
Alignment:
Q  150 aatgtcatgtctcctaggtccatgaatgttgtgtttacgatgattagttttgccatccaaaaaggt 215  Q
    ||||| |||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||    
T  3329972 aatgttatgtctcctaggtccatgaatgctgtgtttacgatgattggttttgccatccaaaaaggt 3329907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 24 - 104
Target Start/End: Original strand, 50462935 - 50463015
Alignment:
Q  24 tgcgtcaagcaaagtggcccaacatgagaaagtgtgttctgacaatcaacatgcttttataccatttgtttttgacacttt 104  Q
    ||||||||||||  || || ||||||||||||||| ||| ||||||||||||||||| |||||||||| ||||||||||||    
T  50462935 tgcgtcaagcaagatgaccaaacatgagaaagtgtcttccgacaatcaacatgctttcataccatttgcttttgacacttt 50463015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 24 - 227
Target Start/End: Complemental strand, 26521606 - 26521388
Alignment:
Q  24 tgcgtcaagcaaagtggcccaacatgagaaagtgtgttctgacaatcaacatgcttttataccatttgtttttgacactttcagttttctagcaccagag 123  Q
    |||||||| |||||||||  ||||||| |||  ||||| |||||||||||||||||||||| ||| || |||  |||||||  |||| ||||||||||||    
T  26521606 tgcgtcaaacaaagtggctaaacatgaaaaaacgtgttatgacaatcaacatgcttttatatcatatgctttcaacacttttggtttcctagcaccagag 26521507  T
Q  124 gttgttgaacattcacatagagttca----------------aatgtcatgtctcctaggtccatgaatgttgtgtttacgatgattagttttgccatcc 207  Q
    | |||||| | |  ||||| ||||||                |||||||||| ||||||| ||||| ||||||||||||||| |||| |||||| |||||    
T  26521506 gctgttgaccttctacatacagttcaaagggtcatgcgtagcaatgtcatgtatcctaggcccatg-atgttgtgtttacgaggattggttttgtcatcc 26521408  T
Q  208 aaaaaggtttaactgcacag 227  Q
    ||||||||||| | ||||||    
T  26521407 aaaaaggtttagcggcacag 26521388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 157 - 215
Target Start/End: Complemental strand, 39001366 - 39001308
Alignment:
Q  157 tgtctcctaggtccatgaatgttgtgtttacgatgattagttttgccatccaaaaaggt 215  Q
    ||||||||||||||||||||||||||||||||| |||| |||||| |||||||||||||    
T  39001366 tgtctcctaggtccatgaatgttgtgtttacgaggattggttttgtcatccaaaaaggt 39001308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 44 - 105
Target Start/End: Original strand, 48656919 - 48656980
Alignment:
Q  44 aacatgagaaagtgtgttctgacaatcaacatgcttttataccatttgtttttgacactttc 105  Q
    |||||||||||||||||| || ||||||| ||| ||||||||||||||||||||||||||||    
T  48656919 aacatgagaaagtgtgttatgtcaatcaaaatgtttttataccatttgtttttgacactttc 48656980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 156 - 212
Target Start/End: Original strand, 55933597 - 55933653
Alignment:
Q  156 atgtctcctaggtccatgaatgttgtgtttacgatgattagttttgccatccaaaaa 212  Q
    ||||||||||||||| |||||||||||||||||||||||  ||||||||||||||||    
T  55933597 atgtctcctaggtccgtgaatgttgtgtttacgatgattgattttgccatccaaaaa 55933653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 44 - 151
Target Start/End: Original strand, 6865829 - 6865936
Alignment:
Q  44 aacatgagaaagtgtgttctgacaatcaacatgcttttataccatttgtttttgacactttcagttttctagcaccagaggttgttgaacattcacatag 143  Q
    |||| ||||||  |||||||||| ||||||||||||||||| |||||| |||||||||||| || ||  |||||| ||| |||||| | | || ||||||    
T  6865829 aacacgagaaaacgtgttctgactatcaacatgcttttatatcatttgcttttgacactttgagcttcatagcactagatgttgttaaccttttacatag 6865928  T
Q  144 agttcaaa 151  Q
    ||||||||    
T  6865929 agttcaaa 6865936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 156 - 215
Target Start/End: Complemental strand, 53619556 - 53619497
Alignment:
Q  156 atgtctcctaggtccatgaatgttgtgtttacgatgattagttttgccatccaaaaaggt 215  Q
    ||||||| ||||||||||||||||||||||||||  ||| ||||||||||||||||||||    
T  53619556 atgtctcttaggtccatgaatgttgtgtttacgagaattggttttgccatccaaaaaggt 53619497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 34 - 151
Target Start/End: Complemental strand, 53170615 - 53170504
Alignment:
Q  34 aaagtggcccaacatgagaaagtgtgttctgacaatcaacatgcttttataccatttgtttttgacactttcagttttctagcaccagaggttgttgaac 133  Q
    ||||| ||| |||||||||||| ||||||||||| |||||||||||       ||||| ||||||||||||| |||| ||||||||||||| |||||| |    
T  53170615 aaagtagccaaacatgagaaagcgtgttctgacagtcaacatgcttg------atttgcttttgacactttcggtttgctagcaccagaggctgttgacc 53170522  T
Q  134 attcacatagagttcaaa 151  Q
     |  ||||||||||||||    
T  53170521 ttctacatagagttcaaa 53170504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 150 - 211
Target Start/End: Original strand, 18981670 - 18981729
Alignment:
Q  150 aatgtcatgtctcctaggtccatgaatgttgtgtttacgatgattagttttgccatccaaaa 211  Q
    ||||||||||||| ||||||||||||||||||||||||||||||| | ||||||||||||||    
T  18981670 aatgtcatgtctc-taggtccatgaatgttgtgtttacgatgatt-ggtttgccatccaaaa 18981729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 150 - 214
Target Start/End: Original strand, 50442610 - 50442674
Alignment:
Q  150 aatgtcatgtctcctaggtccatgaatgttgtgtttacgatgattagttttgccatccaaaaagg 214  Q
    ||||| ||||||||||||| |||| |||||||||||| || |||| |||||||||||||||||||    
T  50442610 aatgttatgtctcctaggttcatggatgttgtgtttaagaggattggttttgccatccaaaaagg 50442674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 24 - 131
Target Start/End: Original strand, 12918361 - 12918468
Alignment:
Q  24 tgcgtcaagcaaagtggcccaacatgagaaagtgtgttctgacaatcaacatgcttttataccatttgtttttgacactttcagttttctagcaccagag 123  Q
    |||||||| |||||||| | ||||| |||||  ||||||||||||||||||  ||||||||| ||||  |||||||||||||   || |||||| |||||    
T  12918361 tgcgtcaaacaaagtggtcaaacataagaaatcgtgttctgacaatcaacacacttttatactatttacttttgacactttcgacttcctagcatcagag 12918460  T
Q  124 gttgttga 131  Q
     |||||||    
T  12918461 attgttga 12918468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 150 - 213
Target Start/End: Complemental strand, 16955436 - 16955373
Alignment:
Q  150 aatgtcatgtctcctaggtccatgaatgttgtgtttacgatgattagttttgccatccaaaaag 213  Q
    |||||||||||||||||| ||||||||||||||||||||| ||||  ||| |||||| ||||||    
T  16955436 aatgtcatgtctcctaggcccatgaatgttgtgtttacgaggattgatttggccatcaaaaaag 16955373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 150 - 217
Target Start/End: Complemental strand, 25504271 - 25504204
Alignment:
Q  150 aatgtcatgtctcctaggtccatgaatgttgtgtttacgatgattagttttgccatccaaaaaggttt 217  Q
    ||||||||||||| ||||||||||||| ||||||||| || ||||  ||||||||| |||||||||||    
T  25504271 aatgtcatgtctcataggtccatgaatattgtgtttatgaggattgcttttgccattcaaaaaggttt 25504204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 150 - 213
Target Start/End: Original strand, 48657046 - 48657109
Alignment:
Q  150 aatgtcatgtctcctaggtccatgaatgttgtgtttacgatgattagttttgccatccaaaaag 213  Q
    ||||| ||||||| |||||| ||||||||||||||||||||||||  ||||||| |||||||||    
T  48657046 aatgttatgtctcataggtctatgaatgttgtgtttacgatgattgattttgccgtccaaaaag 48657109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 150 - 213
Target Start/End: Original strand, 50001057 - 50001120
Alignment:
Q  150 aatgtcatgtctcctaggtccatgaatgttgtgtttacgatgattagttttgccatccaaaaag 213  Q
    ||||| ||||||||||| ||||| |||||||||||||||| ||||  |||||||||||||||||    
T  50001057 aatgttatgtctcctagatccataaatgttgtgtttacgaagattgattttgccatccaaaaag 50001120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 123
Target Start/End: Complemental strand, 12053537 - 12053432
Alignment:
Q  18 aaaacctgcgtcaagcaaagtggcccaacatgagaaagtgtgttctgacaatcaacatgcttttataccatttgtttttgacactttcagttttctagca 117  Q
    |||| ||||||||| |||||| | | |||||||||||  ||||||| |||||||| | | ||||||| |||||| ||| ||| |||||| ||| ||||||    
T  12053537 aaaagctgcgtcaaacaaagttgtcaaacatgagaaatcgtgttctaacaatcaaaacgtttttatatcatttgctttcgactctttcaatttcctagca 12053438  T
Q  118 ccagag 123  Q
    ||||||    
T  12053437 ccagag 12053432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 150 - 211
Target Start/End: Original strand, 38535700 - 38535760
Alignment:
Q  150 aatgtcatgtctcctaggtccatgaatgttgtgtttacgatgattagttttgccatccaaaa 211  Q
    ||||||||||||  |||||||||| ||||||||||||||| ||||||||||| |||||||||    
T  38535700 aatgtcatgtcttataggtccatggatgttgtgtttacgaggattagttttg-catccaaaa 38535760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 37 - 153
Target Start/End: Original strand, 43849350 - 43849466
Alignment:
Q  37 gtggcccaacatgagaaagtgtgttctgacaatcaacatgcttttataccatttgtttttgacactttcagttttctagcaccagaggttgttgaacatt 136  Q
    |||||| |||| ||||||| |||||| || || |||||||||||||||| |||||| |||||||||||  | || |||| |||| ||||||| || | |     
T  43849350 gtggccaaacacgagaaagcgtgttcagataaccaacatgcttttatactatttgtgtttgacacttttggcttcctagaaccaaaggttgtggatcttc 43849449  T
Q  137 cacatagagttcaaatg 153  Q
     ||| ||||||||||||    
T  43849450 tacaaagagttcaaatg 43849466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 26 - 122
Target Start/End: Original strand, 46440880 - 46440976
Alignment:
Q  26 cgtcaagcaaagtggcccaacatgagaaagtgtgttctgacaatcaacatgcttttataccatttgtttttgacactttcagttttctagcaccaga 122  Q
    |||||| |||||||| | ||||| | |||||||||||| ||||| |||| | ||||||| |||||| ||||||||||||| | || |||||| ||||    
T  46440880 cgtcaaacaaagtggtcaaacataaaaaagtgtgttctaacaattaacacgtttttatatcatttgcttttgacactttcggcttcctagcatcaga 46440976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 61 - 124
Target Start/End: Complemental strand, 3330077 - 3330014
Alignment:
Q  61 tctgacaatcaacatgcttttataccatttgtttttgacactttcagttttctagcaccagagg 124  Q
    ||||||||||||||||||||||||| ||||| ||||||||||||  | || |||||| ||||||    
T  3330077 tctgacaatcaacatgcttttatactatttgcttttgacacttttggcttcctagcatcagagg 3330014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 57 - 131
Target Start/End: Complemental strand, 11562983 - 11562909
Alignment:
Q  57 gtgttctgacaatcaacatgcttttataccatttgtttttgacactttcagttttctagcaccagaggttgttga 131  Q
    |||||| ||||||||||||||||||||| |||||  ||| |||| |||| |||||||| |||  |||||||||||    
T  11562983 gtgttcggacaatcaacatgcttttatatcatttactttagacattttcggttttctaacactcgaggttgttga 11562909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 150 - 208
Target Start/End: Complemental strand, 23255689 - 23255631
Alignment:
Q  150 aatgtcatgtctcctaggtccatgaatgttgtgtttacgatgattagttttgccatcca 208  Q
    ||||| |||||||||| |||||||||| |||||||||||| ||||  ||||||||||||    
T  23255689 aatgttatgtctcctaagtccatgaatattgtgtttacgaggattgattttgccatcca 23255631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 150 - 204
Target Start/End: Original strand, 56462237 - 56462291
Alignment:
Q  150 aatgtcatgtctcctaggtccatgaatgttgtgtttacgatgattagttttgcca 204  Q
    |||||||||||||||| |||||| ||||||||||||||||  ||| |||||||||    
T  56462237 aatgtcatgtctcctaagtccataaatgttgtgtttacgagaattggttttgcca 56462291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 149 - 218
Target Start/End: Complemental strand, 8738182 - 8738113
Alignment:
Q  149 aaatgtcatgtctcctaggtccatgaatgttgtgtttacgatgattagttttgccatccaaaaaggttta 218  Q
    |||||||||||||| ||||| |||||||||||||| ||| | ||||  ||||| |||||||||| |||||    
T  8738182 aaatgtcatgtctcttaggttcatgaatgttgtgtatacaaagattgattttgtcatccaaaaaagttta 8738113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 59 - 104
Target Start/End: Complemental strand, 24720017 - 24719972
Alignment:
Q  59 gttctgacaatcaacatgcttttataccatttgtttttgacacttt 104  Q
    |||||||||||||||||| ||||||| ||||||| |||||||||||    
T  24720017 gttctgacaatcaacatgtttttatatcatttgtgtttgacacttt 24719972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 34 - 150
Target Start/End: Complemental strand, 28740014 - 28739897
Alignment:
Q  34 aaagtggcccaacatgagaaagtgtgttctgacaatcaacatgc-ttttataccatttgtttttgacactttcagttttctagcaccagaggttgttgaa 132  Q
    ||||||||| |||| |||||| |||||| ||||| | ||||||  ||||||||||||| | ||||||||||||   || ||| ||||| | ||||||||     
T  28740014 aaagtggccaaacacgagaaattgtgttgtgacagttaacatgtgttttataccatttatgtttgacactttcgacttcctaacaccacaagttgttgac 28739915  T
Q  133 cattcacatagagttcaa 150  Q
    | || |||||||||||||    
T  28739914 cttttacatagagttcaa 28739897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 150 - 215
Target Start/End: Original strand, 30940863 - 30940928
Alignment:
Q  150 aatgtcatgtctcctaggtccatgaatgttgtgtttacgatgattagttttgccatccaaaaaggt 215  Q
    |||||||| | ||||||||| |||||||||||||| | || ||||  |||||||||||||||||||    
T  30940863 aatgtcatatatcctaggtctatgaatgttgtgttcatgaggattgattttgccatccaaaaaggt 30940928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 150 - 226
Target Start/End: Complemental strand, 23242876 - 23242800
Alignment:
Q  150 aatgtcatgtctcctaggtccatgaatgttgtgtttacgatgattagttttgccatccaaaaaggtttaactgcaca 226  Q
    |||||||| |||| ||||||||| ||| |||||||||||||||||  |||||  |||||||||| | |||| |||||    
T  23242876 aatgtcatttctcttaggtccataaatattgtgtttacgatgattgattttgttatccaaaaagctctaacggcaca 23242800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 164 - 200
Target Start/End: Complemental strand, 52022090 - 52022054
Alignment:
Q  164 taggtccatgaatgttgtgtttacgatgattagtttt 200  Q
    ||||||||||||||||||||||||||| |||||||||    
T  52022090 taggtccatgaatgttgtgtttacgataattagtttt 52022054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 44 - 147
Target Start/End: Complemental strand, 25504393 - 25504290
Alignment:
Q  44 aacatgagaaagtgtgttctgacaatcaacatgcttttataccatttgtttttgacactttcagttttctagcaccagaggttgttgaacattcacatag 143  Q
    |||||||||||  ||||||| |||||| ||||| ||||||||| |||| |||||||| |||  |||| ||||||| ||||  |||||| | || | ||||    
T  25504393 aacatgagaaaacgtgttctaacaatcgacatgtttttataccgtttgcttttgacatttttggtttcctagcactagagactgttgaccttttaaatag 25504294  T
Q  144 agtt 147  Q
    ||||    
T  25504293 agtt 25504290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 150 - 213
Target Start/End: Complemental strand, 45661667 - 45661604
Alignment:
Q  150 aatgtcatgtctcctaggtccatgaatgttgtgtttacgatgattagttttgccatccaaaaag 213  Q
    ||||||||  ||| ||||||||||||| |||||||||||| |||| ||||| | ||||||||||    
T  45661667 aatgtcataactcgtaggtccatgaatattgtgtttacgaggattggttttactatccaaaaag 45661604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 150 - 213
Target Start/End: Original strand, 50464427 - 50464490
Alignment:
Q  150 aatgtcatgtctcctaggtccatgaatgttgtgtttacgatgattagttttgccatccaaaaag 213  Q
    |||||||||||||| |  |  ||||||||||||||||||| ||||  |||||||||||||||||    
T  50464427 aatgtcatgtctcccaaatatatgaatgttgtgtttacgaggatttattttgccatccaaaaag 50464490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 27 - 125
Target Start/End: Original strand, 45386053 - 45386151
Alignment:
Q  27 gtcaagcaaagtggcccaacatgagaaagtgtgttctgacaatcaacatgcttttataccatttgtttttgacactttcagttttctagcaccagaggt 125  Q
    |||||| ||||||| | ||||| |||||| ||||||||||||||||  |  |||||||||||||   ||||| |||||  | |||||||||| ||||||    
T  45386053 gtcaaggaaagtggtcaaacataagaaagcgtgttctgacaatcaatttctttttataccatttacatttgaaacttttggctttctagcacaagaggt 45386151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 60 - 153
Target Start/End: Complemental strand, 53098503 - 53098410
Alignment:
Q  60 ttctgacaatcaacatgcttttataccatttgtttttgacactttcagttttctagcaccagaggttgttgaacattc-acatagagttcaaatg 153  Q
    ||||||||||||||||| ||||  ||| |||  |||||||| |||  |||| |||||| ||||||||||| ||| ||| ||||||||||||||||    
T  53098503 ttctgacaatcaacatgtttttgaaccgtttccttttgacatttttggtttcctagcatcagaggttgtt-aaccttctacatagagttcaaatg 53098410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 156 - 213
Target Start/End: Original strand, 7536708 - 7536765
Alignment:
Q  156 atgtctcctaggtccatgaatgttgtgtttacgatgattagttttgccatccaaaaag 213  Q
    ||||||| ||| |||||||||||| ||||||| |||||| ||||||  ||||||||||    
T  7536708 atgtctcgtagatccatgaatgttatgtttacaatgattggttttgtgatccaaaaag 7536765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 159 - 212
Target Start/End: Complemental strand, 34213587 - 34213534
Alignment:
Q  159 tctcctaggtccatgaatgttgtgtttacgatgattagttttgccatccaaaaa 212  Q
    |||||||| |||||||||||||||||||| | |||  |||||||||||| ||||    
T  34213587 tctcctagttccatgaatgttgtgtttacaaggatcggttttgccatccgaaaa 34213534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 186
Target Start/End: Complemental strand, 28739881 - 28739845
Alignment:
Q  150 aatgtcatgtctcctaggtccatgaatgttgtgttta 186  Q
    ||||| ||||||||||||||||| |||||||||||||    
T  28739881 aatgttatgtctcctaggtccataaatgttgtgttta 28739845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 206
Target Start/End: Original strand, 40005289 - 40005345
Alignment:
Q  150 aatgtcatgtctcctaggtccatgaatgttgtgtttacgatgattagttttgccatc 206  Q
    ||||||||||||||||| |  || |||||||||||||| | |||| |||||||||||    
T  40005289 aatgtcatgtctcctagatatatcaatgttgtgtttacaaggattggttttgccatc 40005345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 218
Target Start/End: Original strand, 42455738 - 42455806
Alignment:
Q  150 aatgtcatgtctcctaggtccatgaatgttgtgtttacgatgattagttttgccatccaaaaaggttta 218  Q
    |||||||||| | ||||||||||||||||||| |||||||  |||   |||| ||| ||||||||||||    
T  42455738 aatgtcatgttttctaggtccatgaatgttgtttttacgagaattgactttgtcattcaaaaaggttta 42455806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 194
Target Start/End: Original strand, 46391443 - 46391487
Alignment:
Q  150 aatgtcatgtctcctaggtccatgaatgttgtgtttacgatgatt 194  Q
    ||||||||||||||||  |||||||||||||| ||||||| ||||    
T  46391443 aatgtcatgtctcctaaatccatgaatgttgtatttacgaagatt 46391487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 80; Significance: 1e-37; HSPs: 48)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 24 - 151
Target Start/End: Original strand, 37873627 - 37873754
Alignment:
Q  24 tgcgtcaagcaaagtggcccaacatgagaaagtgtgttctgacaatcaacatgcttttataccatttgtttttgacactttcagttttctagcaccagag 123  Q
    ||||||||||||||||||| |||||||||||| |||||||||||||||||||| |||||||||||||| ||||||||||||  | || ||||||||||||    
T  37873627 tgcgtcaagcaaagtggccaaacatgagaaagcgtgttctgacaatcaacatgtttttataccatttgcttttgacacttttggcttcctagcaccagag 37873726  T
Q  124 gttgttgaacattcacatagagttcaaa 151  Q
    |||||||| | |  ||||||||||||||    
T  37873727 gttgttgaccttctacatagagttcaaa 37873754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 24 - 220
Target Start/End: Complemental strand, 35310566 - 35310354
Alignment:
Q  24 tgcgtcaagcaaagtggcccaacatgagaaagtgtgttctgacaatcaacatgcttttataccatttgtttttgacactttcagttttctagcaccagag 123  Q
    ||||||||||||||||||| ||||||||||||  ||||||||||||||||||||||||||||||| || ||||||||||||| | || || ||| |||||    
T  35310566 tgcgtcaagcaaagtggccaaacatgagaaagcatgttctgacaatcaacatgcttttataccatctgcttttgacactttcggcttcctggcatcagag 35310467  T
Q  124 gttgttgaacattc-acatagagttca----------------aatgtcatgtctcctaggtccatgaatgttgtgtttacgatgattagttttgccatc 206  Q
    | |||| ||| ||| ||||||||| ||                ||||| ||||||||||||||||||||||||||||||||||  ||| |||||||||||    
T  35310466 gctgtt-aaccttctacatagagtccaaagggttttgcatatcaatgttatgtctcctaggtccatgaatgttgtgtttacgagaattggttttgccatc 35310368  T
Q  207 caaaaaggtttaac 220  Q
    |||| |||||||||    
T  35310367 caaagaggtttaac 35310354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 18 - 123
Target Start/End: Original strand, 13166893 - 13166998
Alignment:
Q  18 aaaacctgcgtcaagcaaagtggcccaacatgagaaagtgtgttctgacaatcaacatgcttttataccatttgtttttgacactttcagttttctagca 117  Q
    |||| |||||||||||||||||||  |||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||| | || ||||||    
T  13166893 aaaatctgcgtcaagcaaagtggctaaacatgagaaagcgtgttctgacaatcaacatgcttttataccatttgcttttgacactttcggcttcctagca 13166992  T
Q  118 ccagag 123  Q
     |||||    
T  13166993 tcagag 13166998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 24 - 159
Target Start/End: Original strand, 26212572 - 26212708
Alignment:
Q  24 tgcgtcaagcaaagtggcccaacatgagaaagtgtgttctgacaatcaacatgcttttataccatttgtttttgacactttcagttttctagcaccagag 123  Q
    ||||||||||||||||||| |||||||||||| || ||||||| ||||||||||||||||||||||||||||| || ||||||||||  |||||||||||    
T  26212572 tgcgtcaagcaaagtggccaaacatgagaaagcgtattctgacgatcaacatgcttttataccatttgttttttaccctttcagtttcttagcaccagag 26212671  T
Q  124 gttgttgaacattc-acatagagttc-aaatgtcatgt 159  Q
    | | || ||| ||| ||||||||||| |||||||||||    
T  26212672 gctatt-aaccttctacatagagttcaaaatgtcatgt 26212708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 25 - 131
Target Start/End: Original strand, 15292016 - 15292122
Alignment:
Q  25 gcgtcaagcaaagtggcccaacatgagaaagtgtgttctgacaatcaacatgcttttataccatttgtttttgacactttcagttttctagcaccagagg 124  Q
    ||||||| |||||||||| |||||||||||  |||||||||||||||||||| |||||||| |||||||||| ||||||| ||||||||||||| |||||    
T  15292016 gcgtcaaacaaagtggccaaacatgagaaaacgtgttctgacaatcaacatgtttttatacaatttgttttttacacttttagttttctagcactagagg 15292115  T
Q  125 ttgttga 131  Q
    || ||||    
T  15292116 ttattga 15292122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 18 - 124
Target Start/End: Complemental strand, 38875762 - 38875656
Alignment:
Q  18 aaaacctgcgtcaagcaaagtggcccaacatgagaaagtgtgttctgacaatcaacatgcttttataccatttgtttttgacactttcagttttctagca 117  Q
    |||| |||| |||| ||||| | || ||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||| || ||||||    
T  38875762 aaaaactgcatcaaacaaagcgaccaaacatgagaaagtgtgttctgacaatcaacatgtttttgtaccatttgtttttgacactttcagcttcctagca 38875663  T
Q  118 ccagagg 124  Q
    |||||||    
T  38875662 ccagagg 38875656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 24 - 105
Target Start/End: Complemental strand, 14423796 - 14423715
Alignment:
Q  24 tgcgtcaagcaaagtggcccaacatgagaaagtgtgttctgacaatcaacatgcttttataccatttgtttttgacactttc 105  Q
    |||||||||||||||| || |||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||    
T  14423796 tgcgtcaagcaaagtgaccgaacatgagaaagcgtgttctgacaatcaacatgcttttataccatttgcttttgacactttc 14423715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 18 - 220
Target Start/End: Original strand, 25663015 - 25663233
Alignment:
Q  18 aaaacctgcgtcaagcaaagtggcccaacatgagaaagtgtgttctgacaatcaacatgcttttataccatttgtttttgacactttcagttttctagca 117  Q
    |||| |||| |||| |||||||||| |||||||||||| ||||||||| |||||||||| |||||||||||||| ||||||||||||||| || ||||||    
T  25663015 aaaagctgcatcaaacaaagtggccaaacatgagaaagcgtgttctgataatcaacatgtttttataccatttgcttttgacactttcagcttcctagca 25663114  T
Q  118 ccagaggttgttgaacattcacatagagttcaaa----------------tgtcatgtctcctaggtccatgaatgttgtgtttacgatgattagttttg 201  Q
     |||| |||||||| | |  ||||||||| ||||                ||| ||||| ||||||||||||||||||| |||||||| |||| | ||||    
T  25663115 tcagaagttgttgatcttctacatagagtccaaagggttatgcatatcaatgttatgtcccctaggtccatgaatgttgagtttacgaggattggctttg 25663214  T
Q  202 ccatccaaaaaggtttaac 220  Q
     ||||||||||||| ||||    
T  25663215 tcatccaaaaaggtctaac 25663233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 18 - 212
Target Start/End: Original strand, 32269780 - 32269990
Alignment:
Q  18 aaaacctgcgtcaagcaaagtggcccaacatgagaaagtgtgttctgacaatcaacatgcttttataccatttgtttttgacactttcagttttctagca 117  Q
    |||| |||| |||| |||||||| | ||||||||||||||||||||||||||||||| |||||||||||||||| |||||| ||||||  ||| ||||||    
T  32269780 aaaagctgcatcaaccaaagtggtcaaacatgagaaagtgtgttctgacaatcaacacgcttttataccatttgcttttgatactttcgatttcctagca 32269879  T
Q  118 ccagaggttgttgaacattcacatagagttcaaa----------------tgtcatgtctcctaggtccatgaatgttgtgtttacgatgattagttttg 201  Q
    | |||||||||||| | |   |||  ||||||||                |||||||||||||||||||||||||||||||||||||| ||||  ||| |    
T  32269880 ctagaggttgttgaccttctgcatgaagttcaaaaggtcatgcatagcaatgtcatgtctcctaggtccatgaatgttgtgtttacgaggattgatttcg 32269979  T
Q  202 ccatccaaaaa 212  Q
    |||||||||||    
T  32269980 ccatccaaaaa 32269990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 27 - 150
Target Start/End: Complemental strand, 34335452 - 34335329
Alignment:
Q  27 gtcaagcaaagtggcccaacatgagaaagtgtgttctgacaatcaacatgcttttataccatttgtttttgacactttcagttttctagcaccagaggtt 126  Q
    ||||||||||  |||| |||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||   |||||  ||||||||| |    
T  34335452 gtcaagcaaaagggccaaacatgagaaagcgtgtcctgacaatcaacatgcttttataccatttgtttttgacactttcgactttctgacaccagaggct 34335353  T
Q  127 gttgaacattcacatagagttcaa 150  Q
    ||||| | |  |||||||||||||    
T  34335352 gttgaccttctacatagagttcaa 34335329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 44 - 130
Target Start/End: Complemental strand, 42921795 - 42921709
Alignment:
Q  44 aacatgagaaagtgtgttctgacaatcaacatgcttttataccatttgtttttgacactttcagttttctagcaccagaggttgttg 130  Q
    |||| ||||||  ||||||||||||||||||||||||||||||||||| || |||||||||| |||| |||||||||||||||||||    
T  42921795 aacacgagaaaacgtgttctgacaatcaacatgcttttataccatttgcttatgacactttcggtttcctagcaccagaggttgttg 42921709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 24 - 103
Target Start/End: Complemental strand, 27336811 - 27336732
Alignment:
Q  24 tgcgtcaagcaaagtggcccaacatgagaaagtgtgttctgacaatcaacatgcttttataccatttgtttttgacactt 103  Q
    ||||||||||||||||| | |||||||||||  ||||||||||||||||||| ||||||||||||||| |||||||||||    
T  27336811 tgcgtcaagcaaagtggtcaaacatgagaaatcgtgttctgacaatcaacatacttttataccatttgcttttgacactt 27336732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 18 - 105
Target Start/End: Original strand, 33692038 - 33692125
Alignment:
Q  18 aaaacctgcgtcaagcaaagtggcccaacatgagaaagtgtgttctgacaatcaacatgcttttataccatttgtttttgacactttc 105  Q
    |||| |||||||||||||||||||| ||||||| |||  ||||| ||||||||||||||||||| ||||||||| |||||||||||||    
T  33692038 aaaagctgcgtcaagcaaagtggccaaacatgacaaaacgtgttatgacaatcaacatgcttttgtaccatttgcttttgacactttc 33692125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 24 - 131
Target Start/End: Complemental strand, 43129652 - 43129545
Alignment:
Q  24 tgcgtcaagcaaagtggcccaacatgagaaagtgtgttctgacaatcaacatgcttttataccatttgtttttgacactttcagttttctagcaccagag 123  Q
    ||||||||||||||||| | |||||||||||  |||||||||||||||||||| |||| ||||||||| |||||||| |||| |||| ||| |||||||     
T  43129652 tgcgtcaagcaaagtggtcaaacatgagaaaacgtgttctgacaatcaacatgtttttctaccatttgcttttgacattttcggtttcctaacaccagat 43129553  T
Q  124 gttgttga 131  Q
    ||| ||||    
T  43129552 gtttttga 43129545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 28 - 104
Target Start/End: Original strand, 3114156 - 3114232
Alignment:
Q  28 tcaagcaaagtggcccaacatgagaaagtgtgttctgacaatcaacatgcttttataccatttgtttttgacacttt 104  Q
    |||| |||||||||| ||||||||||||  |||||||||| |||||||| |||||||||||||||||||||||||||    
T  3114156 tcaaacaaagtggccaaacatgagaaagcatgttctgacagtcaacatgtttttataccatttgtttttgacacttt 3114232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 24 - 115
Target Start/End: Original strand, 32230496 - 32230587
Alignment:
Q  24 tgcgtcaagcaaagtggcccaacatgagaaagtgtgttctgacaatcaacatgcttttataccatttgtttttgacactttcagttttctag 115  Q
    |||||||||||||||| || ||||||||||| ||||||||||||||||||| ||||||||||||| ||  || ||||||||  |||||||||    
T  32230496 tgcgtcaagcaaagtgaccaaacatgagaaaatgtgttctgacaatcaacaagcttttataccatctgcgttcgacacttttggttttctag 32230587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 60 - 131
Target Start/End: Original strand, 14723269 - 14723340
Alignment:
Q  60 ttctgacaatcaacatgcttttataccatttgtttttgacactttcagttttctagcaccagaggttgttga 131  Q
    ||||||||||||||||||||||||| ||||||||||| |||||||  ||||| ||||| |||||||||||||    
T  14723269 ttctgacaatcaacatgcttttatatcatttgttttttacacttttggttttttagcatcagaggttgttga 14723340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 44 - 131
Target Start/End: Complemental strand, 35456054 - 35455967
Alignment:
Q  44 aacatgagaaagtgtgttctgacaatcaacatgcttttataccatttgtttttgacactttcagttttctagcaccagaggttgttga 131  Q
    |||||||||||| ||||||| |||||||||||||||||||||| |||| |||||||| |||  | || ||||||||||||| ||||||    
T  35456054 aacatgagaaagcgtgttctaacaatcaacatgcttttataccttttgcttttgacaattttggcttcctagcaccagaggatgttga 35455967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 150 - 215
Target Start/End: Complemental strand, 430578 - 430513
Alignment:
Q  150 aatgtcatgtctcctaggtccatgaatgttgtgtttacgatgattagttttgccatccaaaaaggt 215  Q
    ||||| |||||||||||||||||||||||||||||||||| ||||  || ||||||||||||||||    
T  430578 aatgttatgtctcctaggtccatgaatgttgtgtttacgaggattgattatgccatccaaaaaggt 430513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 150 - 215
Target Start/End: Original strand, 2566226 - 2566291
Alignment:
Q  150 aatgtcatgtctcctaggtccatgaatgttgtgtttacgatgattagttttgccatccaaaaaggt 215  Q
    ||||||||||||||||| ||||| |||||||||||||||| ||||  |||||||||||||||||||    
T  2566226 aatgtcatgtctcctagatccatcaatgttgtgtttacgaggattgattttgccatccaaaaaggt 2566291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 67 - 151
Target Start/End: Original strand, 22188687 - 22188771
Alignment:
Q  67 aatcaacatgcttttataccatttgtttttgacactttcagttttctagcaccagaggttgttgaacattcacatagagttcaaa 151  Q
    |||||||||| |||||||| |||||||||||||||||||  |||| |||||||||||| |||||| | |  ||||||||||||||    
T  22188687 aatcaacatgattttatactatttgtttttgacactttcgattttttagcaccagaggctgttgaccttctacatagagttcaaa 22188771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 150 - 214
Target Start/End: Complemental strand, 23023571 - 23023507
Alignment:
Q  150 aatgtcatgtctcctaggtccatgaatgttgtgtttacgatgattagttttgccatccaaaaagg 214  Q
    |||||||||||||||||||| ||||||||||||||||||| ||||  ||||| ||||||||||||    
T  23023571 aatgtcatgtctcctaggtcgatgaatgttgtgtttacgaagattgattttgtcatccaaaaagg 23023507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 58 - 104
Target Start/End: Complemental strand, 430686 - 430640
Alignment:
Q  58 tgttctgacaatcaacatgcttttataccatttgtttttgacacttt 104  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||    
T  430686 tgttctgacaatcaacatgcttttataccatttgcttttgacacttt 430640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 23 - 89
Target Start/End: Complemental strand, 8859035 - 8858969
Alignment:
Q  23 ctgcgtcaagcaaagtggcccaacatgagaaagtgtgttctgacaatcaacatgcttttataccatt 89  Q
    |||||||||||||||| | | |||||||||||| |||||||||||||||||||| ||||||| ||||    
T  8859035 ctgcgtcaagcaaagtagtcaaacatgagaaagcgtgttctgacaatcaacatgtttttatatcatt 8858969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 30 - 104
Target Start/End: Original strand, 9829348 - 9829421
Alignment:
Q  30 aagcaaagtggcccaacatgagaaagtgtgttctgacaatcaacatgcttttataccatttgtttttgacacttt 104  Q
    ||||||||||||  ||||||| ||| |||||| |||||||||||||||||||||||||||| | |||||||||||    
T  9829348 aagcaaagtggct-aacatgataaaatgtgttttgacaatcaacatgcttttataccatttatatttgacacttt 9829421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 23 - 131
Target Start/End: Complemental strand, 8100671 - 8100563
Alignment:
Q  23 ctgcgtcaagcaaagtggcccaacatgagaaagtgtgttctgacaatcaacatgcttttataccatttgtttttgacactttcagttttctagcaccaga 122  Q
    |||| ||||| ||| ||| | |||||||||||  ||||| |||||||  ||||||||||||||||||||||| |||||||||||  || ||  ||| |||    
T  8100671 ctgcatcaagtaaaatggtcaaacatgagaaaacgtgttgtgacaatttacatgcttttataccatttgtttgtgacactttcaacttccttccactaga 8100572  T
Q  123 ggttgttga 131  Q
    |||||||||    
T  8100571 ggttgttga 8100563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 70 - 130
Target Start/End: Original strand, 41343473 - 41343533
Alignment:
Q  70 caacatgcttttataccatttgtttttgacactttcagttttctagcaccagaggttgttg 130  Q
    |||| ||||||||||||||||||||| ||||  ||| ||||||||||||||||||||||||    
T  41343473 caacgtgcttttataccatttgttttcgacatattcggttttctagcaccagaggttgttg 41343533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 159 - 212
Target Start/End: Original strand, 15292165 - 15292218
Alignment:
Q  159 tctcctaggtccatgaatgttgtgtttacgatgattagttttgccatccaaaaa 212  Q
    |||||||||||||||||||||||||||| || ||||  ||||||||||||||||    
T  15292165 tctcctaggtccatgaatgttgtgtttatgaggattgattttgccatccaaaaa 15292218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 47 - 103
Target Start/End: Original strand, 43115469 - 43115525
Alignment:
Q  47 atgagaaagtgtgttctgacaatcaacatgcttttataccatttgtttttgacactt 103  Q
    ||||||||| ||||| |||||||||||||||||| ||| |||||| |||||||||||    
T  43115469 atgagaaagcgtgttttgacaatcaacatgctttcatagcatttgcttttgacactt 43115525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 150 - 213
Target Start/End: Complemental strand, 42921673 - 42921611
Alignment:
Q  150 aatgtcatgtctcctaggtccatgaatgttgtgtttacgatgattagttttgccatccaaaaag 213  Q
    |||||||||||||||| |||||| ||| |||||||||| | |||| ||||||||||||||||||    
T  42921673 aatgtcatgtctcctaagtccat-aatattgtgtttacaaggattggttttgccatccaaaaag 42921611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 156 - 194
Target Start/End: Original strand, 13167047 - 13167085
Alignment:
Q  156 atgtctcctaggtccatgaatgttgtgtttacgatgatt 194  Q
    ||||||||||||||||||||||||| |||||||||||||    
T  13167047 atgtctcctaggtccatgaatgttgggtttacgatgatt 13167085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 154 - 212
Target Start/End: Original strand, 22188790 - 22188848
Alignment:
Q  154 tcatgtctcctaggtccatgaatgttgtgtttacgatgattagttttgccatccaaaaa 212  Q
    ||||||||||||| | ||||||||||||||||||||  ||| |||||| ||||||||||    
T  22188790 tcatgtctcctagattcatgaatgttgtgtttacgagaattggttttgtcatccaaaaa 22188848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 63 - 151
Target Start/End: Complemental strand, 7716261 - 7716172
Alignment:
Q  63 tgacaatcaacatgcttttataccatttgt-ttttgacactttcagttttctagcaccagaggttgttgaacattcacatagagttcaaa 151  Q
    ||||| |||| ||| || |||||||||||  ||||||||||||  ||||||||||||||||||||||||  | || ||||| ||||||||    
T  7716261 tgacattcaatatgtttctataccatttgcgttttgacacttttggttttctagcaccagaggttgttggtcttttacataaagttcaaa 7716172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 174 - 211
Target Start/End: Complemental strand, 12033383 - 12033346
Alignment:
Q  174 aatgttgtgtttacgatgattagttttgccatccaaaa 211  Q
    ||||||||||||||||||||| ||||||||||||||||    
T  12033383 aatgttgtgtttacgatgattggttttgccatccaaaa 12033346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 150 - 215
Target Start/End: Complemental strand, 27336671 - 27336606
Alignment:
Q  150 aatgtcatgtctcctaggtccatgaatgttgtgtttacgatgattagttttgccatccaaaaaggt 215  Q
    ||||| |||||||||| ||||||||||||||| ||||| | ||||  |||||||||| ||||||||    
T  27336671 aatgttatgtctcctaagtccatgaatgttgtttttacaaggattgattttgccatcaaaaaaggt 27336606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 44 - 104
Target Start/End: Original strand, 26577409 - 26577469
Alignment:
Q  44 aacatgagaaagtgtgttctgacaatcaacatgcttttataccatttgtttttgacacttt 104  Q
    ||||| ||||||||||||| ||| ||||||||| |||||||| |||||| ||| |||||||    
T  26577409 aacataagaaagtgtgttccgactatcaacatgtttttatacaatttgtgtttcacacttt 26577469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 180 - 220
Target Start/End: Complemental strand, 33894058 - 33894018
Alignment:
Q  180 gtgtttacgatgattagttttgccatccaaaaaggtttaac 220  Q
    |||||||||||||||||||||||||| ||||||| ||||||    
T  33894058 gtgtttacgatgattagttttgccattcaaaaagatttaac 33894018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 162 - 214
Target Start/End: Complemental strand, 34476005 - 34475953
Alignment:
Q  162 cctaggtccatgaatgttgtgtttacgatgattagttttgccatccaaaaagg 214  Q
    |||||||||||||||||||||||||||| ||||  |||| || ||||||||||    
T  34476005 cctaggtccatgaatgttgtgtttacgaagattgttttttccgtccaaaaagg 34475953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 150 - 216
Target Start/End: Complemental strand, 38875614 - 38875551
Alignment:
Q  150 aatgtcatgtctcctaggtccatgaatgttgtgtttacgatgattagttttgccatccaaaaaggtt 216  Q
    |||||| ||||||||||||| |||| ||||||||||||||||||| |  |||| |||||||||||||    
T  38875614 aatgtcttgtctcctaggtcaatga-tgttgtgtttacgatgattgg--ttgcgatccaaaaaggtt 38875551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 63
Target Start/End: Complemental strand, 433416 - 433371
Alignment:
Q  18 aaaacctgcgtcaagcaaagtggcccaacatgagaaagtgtgttct 63  Q
    |||| ||| |||||||||||||||| |||||||||||| |||||||    
T  433416 aaaagctgtgtcaagcaaagtggccaaacatgagaaagcgtgttct 433371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 34 - 101
Target Start/End: Complemental strand, 14436605 - 14436541
Alignment:
Q  34 aaagtggcccaacatgagaaagtgtgttctgacaatcaacatgcttttataccatttgtttttgacac 101  Q
    ||||||||| ||||||| |||  |||||||   |||||||||| ||||||| ||||||||||||||||    
T  14436605 aaagtggccaaacatgaaaaaacgtgttct---aatcaacatgtttttatatcatttgtttttgacac 14436541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 150 - 203
Target Start/End: Complemental strand, 15810025 - 15809972
Alignment:
Q  150 aatgtcatgtctcctaggtccatgaatgttgtgtttacgatgattagttttgcc 203  Q
    |||||||||||||||||| |||||||||| ||||| |||| ||||  |||||||    
T  15810025 aatgtcatgtctcctaggcccatgaatgtcgtgttcacgaggattgattttgcc 15809972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 150 - 203
Target Start/End: Complemental strand, 15833038 - 15832985
Alignment:
Q  150 aatgtcatgtctcctaggtccatgaatgttgtgtttacgatgattagttttgcc 203  Q
    ||||||| ||||||||| | ||||||||| ||||| |||| |||||||||||||    
T  15833038 aatgtcacgtctcctagattcatgaatgtcgtgttcacgaggattagttttgcc 15832985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 150 - 187
Target Start/End: Complemental strand, 24113551 - 24113514
Alignment:
Q  150 aatgtcatgtctcctaggtccatgaatgttgtgtttac 187  Q
    |||||||||||| ||||||||||||||||||| |||||    
T  24113551 aatgtcatgtcttctaggtccatgaatgttgtttttac 24113514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 44 - 104
Target Start/End: Complemental strand, 13307454 - 13307394
Alignment:
Q  44 aacatgagaaagtgtgttctgacaatcaacatgcttttataccatttgtttttgacacttt 104  Q
    ||||||||||||||| |||| || ||||||||| ||||||||| ||||  || ||||||||    
T  13307454 aacatgagaaagtgtattcttactatcaacatgtttttataccttttgcgttcgacacttt 13307394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 213
Target Start/End: Complemental strand, 14423661 - 14423600
Alignment:
Q  150 aatgtcatgtctcctaggtccatgaatgttgtgtttacgatgattagttttgccatccaaaaag 213  Q
    ||||||||||||| ||||||||| |||  |||||| || | |||| ||||||||||||||||||    
T  14423661 aatgtcatgtctcttaggtccataaat--tgtgttcacaaggattggttttgccatccaaaaag 14423600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 214
Target Start/End: Original strand, 15506746 - 15506810
Alignment:
Q  150 aatgtcatgtctcctaggtccatgaatgttgtgtttacgatgattagttttgccatccaaaaagg 214  Q
    |||||||||||||||||  | | ||||||||||||||||| ||||  |||| ||||| |||||||    
T  15506746 aatgtcatgtctcctagacctacgaatgttgtgtttacgaggattgattttaccatcaaaaaagg 15506810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 214
Target Start/End: Original strand, 37873769 - 37873833
Alignment:
Q  150 aatgtcatgtctcctaggtccatgaatgttgtgtttacgatgattagttttgccatccaaaaagg 214  Q
    ||||||||| || ||||||| |||||||||||||||| || ||||  |||||| ||| |||||||    
T  37873769 aatgtcatgacttctaggtctatgaatgttgtgtttaagaggattgattttgctatcaaaaaagg 37873833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1768 (Bit Score: 76; Significance: 3e-35; HSPs: 1)
Name: scaffold1768
Description:

Target: scaffold1768; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 18 - 214
Target Start/End: Original strand, 167 - 379
Alignment:
Q  18 aaaacctgcgtcaagcaaagtggcccaacatgagaaagtgtgttctgacaatcaacatgcttttataccatttgtttttgacactttcagttttctagca 117  Q
    |||| |||||||||||||||||||| ||||||||| |||| ||| |||| ||||||||||||||||||||||||| |||||||||||  ||||||||| |    
T  167 aaaaactgcgtcaagcaaagtggccaaacatgagacagtgggttatgaccatcaacatgcttttataccatttgtgtttgacacttttggttttctagta 266  T
Q  118 ccagaggttgttgaacattcacatagagttca----------------aatgtcatgtctcctaggtccatgaatgttgtgtttacgatgattagttttg 201  Q
    ||| |||||||||| | |   |||| ||||||                ||||||||||||||||| || ||||| ||||||||||||| |||||||||||    
T  267 ccaaaggttgttgaccttctgcataaagttcaaaaagtcatacatagcaatgtcatgtctcctagatcgatgaacgttgtgtttacgaggattagttttg 366  T
Q  202 ccatccaaaaagg 214  Q
    |||||||||||||    
T  367 ccatccaaaaagg 379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 75; Significance: 1e-34; HSPs: 33)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 25 - 151
Target Start/End: Original strand, 4206586 - 4206712
Alignment:
Q  25 gcgtcaagcaaagtggcccaacatgagaaagtgtgttctgacaatcaacatgcttttataccatttgtttttgacactttcagttttctagcaccagagg 124  Q
    |||||||||||||||||  |||||||||||| ||||||||||||| |||||||||||||| |||||| ||||||||||||| | || |||||||||||||    
T  4206586 gcgtcaagcaaagtggctaaacatgagaaagcgtgttctgacaatgaacatgcttttatatcatttgcttttgacactttcgggttcctagcaccagagg 4206685  T
Q  125 ttgttgaacattcacatagagttcaaa 151  Q
    ||||||| | |  ||||||||||||||    
T  4206686 ttgttgaccttctacatagagttcaaa 4206712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 24 - 215
Target Start/End: Original strand, 17249294 - 17249501
Alignment:
Q  24 tgcgtcaagcaaagtggcccaacatgagaaagtgtgttctgacaatcaacatgcttttataccatttgtttttgacactttcagttttctagcaccagag 123  Q
    |||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||  | || |||||| |||||    
T  17249294 tgcgtcaaacaaagtggccaaacatgagaaagtgtgttctgacaatcaacatgcttttataccatttgcttttgacacttttggcttcctagcatcagag 17249393  T
Q  124 gttgttgaacattcacatagagttca----------------aatgtcatgtctcctaggtccatgaatgttgtgtttacgatgattagttttgccatcc 207  Q
    |  ||||| | |  ||||||||| ||                ||||| |||||||||| || |||||||||||||||||||| |||| ||||||||||||    
T  17249394 gcagttgaccttctacatagagtccaaaggattatgtatagcaatgttatgtctcctaagttcatgaatgttgtgtttacgaggattggttttgccatcc 17249493  T
Q  208 aaaaaggt 215  Q
    ||||||||    
T  17249494 aaaaaggt 17249501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 18 - 151
Target Start/End: Original strand, 45660 - 45793
Alignment:
Q  18 aaaacctgcgtcaagcaaagtggcccaacatgagaaagtgtgttctgacaatcaacatgcttttataccatttgtttttgacactttcagttttctagca 117  Q
    |||| |||| ||||||||||||  | |||||||||||  ||||||||||||||||||||||||||| ||||||||||||||||||||| ||||  |||||    
T  45660 aaaagctgcatcaagcaaagtgatcaaacatgagaaaacgtgttctgacaatcaacatgcttttattccatttgtttttgacactttcggtttcttagca 45759  T
Q  118 ccagaggttgttgaacattcacatagagttcaaa 151  Q
    ||||||| |||||| | |  ||||||||||||||    
T  45760 ccagaggctgttgaccttctacatagagttcaaa 45793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 32 - 131
Target Start/End: Original strand, 4165919 - 4166018
Alignment:
Q  32 gcaaagtggcccaacatgagaaagtgtgttctgacaatcaacatgcttttataccatttgtttttgacactttcagttttctagcaccagaggttgttga 131  Q
    ||||||||||  |||||||||||| |||||||||||||||||||||||||||| |||||| ||||||||||||| | || ||||||||||||||||||||    
T  4165919 gcaaagtggctaaacatgagaaagcgtgttctgacaatcaacatgcttttatatcatttgcttttgacactttcgggttcctagcaccagaggttgttga 4166018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 18 - 131
Target Start/End: Original strand, 33220694 - 33220807
Alignment:
Q  18 aaaacctgcgtcaagcaaagtggcccaacatgagaaagtgtgttctgacaatcaacatgcttttataccatttgtttttgacactttcagttttctagca 117  Q
    |||| |||| ||||||||||||||| |||||||||||| ||||  ||||||||||||||||||||||||||||| ||||||||||||| | || ||||||    
T  33220694 aaaagctgcatcaagcaaagtggccaaacatgagaaagcgtgtgttgacaatcaacatgcttttataccatttgcttttgacactttcggcttcctagca 33220793  T
Q  118 ccagaggttgttga 131  Q
     | |||||||||||    
T  33220794 tccgaggttgttga 33220807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 23 - 104
Target Start/End: Complemental strand, 34415555 - 34415474
Alignment:
Q  23 ctgcgtcaagcaaagtggcccaacatgagaaagtgtgttctgacaatcaacatgcttttataccatttgtttttgacacttt 104  Q
    |||||||||||||| ||||  |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  34415555 ctgcgtcaagcaaaatggcgaaacatgagaaagtgtgttctgacaatcaacatgcttttatgccatttgtttttgacacttt 34415474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 27 - 131
Target Start/End: Complemental strand, 959695 - 959591
Alignment:
Q  27 gtcaagcaaagtggcccaacatgagaaagtgtgttctgacaatcaacatgcttttataccatttgtttttgacactttcagttttctagcaccagaggtt 126  Q
    |||||||||||||||  | |||||||||  ||||||||||||||||||||  |||||||||||||||||||||| |||| |||| |||||||||||||||    
T  959695 gtcaagcaaagtggctaaccatgagaaaacgtgttctgacaatcaacatgtctttataccatttgtttttgacattttcggtttcctagcaccagaggtt 959596  T
Q  127 gttga 131  Q
    |||||    
T  959595 gttga 959591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 18 - 104
Target Start/End: Complemental strand, 34304620 - 34304534
Alignment:
Q  18 aaaacctgcgtcaagcaaagtggcccaacatgagaaagtgtgttctgacaatcaacatgcttttataccatttgtttttgacacttt 104  Q
    |||| |||||||||||||| |  || |||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||    
T  34304620 aaaagctgcgtcaagcaaaataaccaaacatgagaaagcgtgttctgacaatcaacatgcttttataccatttgcttttgacacttt 34304534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 150 - 214
Target Start/End: Original strand, 3137378 - 3137442
Alignment:
Q  150 aatgtcatgtctcctaggtccatgaatgttgtgtttacgatgattagttttgccatccaaaaagg 214  Q
    |||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||    
T  3137378 aatgtcatgtctcctaggtccatgaatgttgtgtttacgaggattggttttgccatccaaaaagg 3137442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 26 - 104
Target Start/End: Original strand, 357708 - 357786
Alignment:
Q  26 cgtcaagcaaagtggcccaacatgagaaagtgtgttctgacaatcaacatgcttttataccatttgtttttgacacttt 104  Q
    ||||||||||||||||| |||||||||||| ||||||||||||| |||||||||||||| | ||||||||| |||||||    
T  357708 cgtcaagcaaagtggccaaacatgagaaagcgtgttctgacaatgaacatgcttttataacctttgtttttaacacttt 357786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 23 - 131
Target Start/End: Complemental strand, 28626050 - 28625941
Alignment:
Q  23 ctgcgtcaagcaaagtggcccaacatgagaaagtgtgttctgacaatcaacatgctttt-ataccatttgtttttgacactttcagttttctagcaccag 121  Q
    |||||||||| || |||||  |||| ||||||  |||||||||||||||||||  |||| ||||||||||||||| ||||||||| ||| ||||||||||    
T  28626050 ctgcgtcaagtaaggtggctaaacacgagaaaacgtgttctgacaatcaacattttttttataccatttgttttttacactttcaatttcctagcaccag 28625951  T
Q  122 aggttgttga 131  Q
    ||||||||||    
T  28625950 aggttgttga 28625941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 150 - 215
Target Start/End: Complemental strand, 32115694 - 32115629
Alignment:
Q  150 aatgtcatgtctcctaggtccatgaatgttgtgtttacgatgattagttttgccatccaaaaaggt 215  Q
    |||||||||||||||||||||||||||||||||||||||||||||  |||||| ||| ||||||||    
T  32115694 aatgtcatgtctcctaggtccatgaatgttgtgtttacgatgattgattttgctatctaaaaaggt 32115629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 24 - 97
Target Start/End: Complemental strand, 34168986 - 34168913
Alignment:
Q  24 tgcgtcaagcaaagtggcccaacatgagaaagtgtgttctgacaatcaacatgcttttataccatttgtttttg 97  Q
    ||||||||||||||||||| ||||||||||||  ||||  ||||| |||||||||||||||||||||| |||||    
T  34168986 tgcgtcaagcaaagtggccaaacatgagaaagcatgtttggacaagcaacatgcttttataccatttgcttttg 34168913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 25 - 117
Target Start/End: Complemental strand, 28543492 - 28543400
Alignment:
Q  25 gcgtcaagcaaagtggcccaacatgagaaagtgtgttctgacaatcaacatgcttttataccatttgtttttgacactttcagttttctagca 117  Q
    |||||||||||||||||| |||||||||||  ||||| ||| |||||  ||||| |||||| ||||| ||||||||||||||| || ||||||    
T  28543492 gcgtcaagcaaagtggccaaacatgagaaatcgtgttttgaaaatcactatgctcttatactatttgattttgacactttcagcttcctagca 28543400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 27 - 103
Target Start/End: Original strand, 29338071 - 29338147
Alignment:
Q  27 gtcaagcaaagtggcccaacatgagaaagtgtgttctgacaatcaacatgcttttataccatttgtttttgacactt 103  Q
    |||||||||||  ||| |||||||||||  ||||||| |||||||||||||| |||||||||||| |||||||||||    
T  29338071 gtcaagcaaagctgccaaacatgagaaaacgtgttctaacaatcaacatgctcttataccatttgcttttgacactt 29338147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 44 - 151
Target Start/End: Complemental strand, 24016435 - 24016328
Alignment:
Q  44 aacatgagaaagtgtgttctgacaatcaacatgcttttataccatttgtttttgacactttcagttttctagcaccagaggttgttgaacattcacatag 143  Q
    ||||||||||||  |||||| |||||||||||| |||||||||||||| | |||| | |||  |||| ||||||||||| ||||||||   || ||||||    
T  24016435 aacatgagaaagcttgttctcacaatcaacatgtttttataccatttgctattgatagttttggtttcctagcaccagatgttgttgattttttacatag 24016336  T
Q  144 agttcaaa 151  Q
    ||||||||    
T  24016335 agttcaaa 24016328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 24 - 122
Target Start/End: Original strand, 34554266 - 34554364
Alignment:
Q  24 tgcgtcaagcaaagtggcccaacatgagaaagtgtgttctgacaatcaacatgcttttataccatttgtttttgacactttcagttttctagcaccaga 122  Q
    |||||||||||||  | || |||||||||||| ||||||||| |||||| ||| |||||||||||||  ||||||||| ||| | || |||||||||||    
T  34554266 tgcgtcaagcaaaacgaccaaacatgagaaagcgtgttctgataatcaagatgtttttataccatttacttttgacacattcggcttcctagcaccaga 34554364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 159 - 212
Target Start/End: Original strand, 357856 - 357909
Alignment:
Q  159 tctcctaggtccatgaatgttgtgtttacgatgattagttttgccatccaaaaa 212  Q
    ||||||||||||||||||||||||||||||| ||||| |||||||||| |||||    
T  357856 tctcctaggtccatgaatgttgtgtttacgaagattaattttgccatctaaaaa 357909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 157 - 215
Target Start/End: Original strand, 33220849 - 33220907
Alignment:
Q  157 tgtctcctaggtccatgaatgttgtgtttacgatgattagttttgccatccaaaaaggt 215  Q
    ||||| |||||||||||||||||| ||||||||| ||| |||||||||||| |||||||    
T  33220849 tgtcttctaggtccatgaatgttgcgtttacgataattggttttgccatcctaaaaggt 33220907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 157 - 214
Target Start/End: Complemental strand, 959550 - 959493
Alignment:
Q  157 tgtctcctaggtccatgaatgttgtgtttacgatgattagttttgccatccaaaaagg 214  Q
    ||||||||||||||||||||||||||||||||| ||||  ||||| |||| |||||||    
T  959550 tgtctcctaggtccatgaatgttgtgtttacgaggattgattttgtcatctaaaaagg 959493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 150 - 211
Target Start/End: Original strand, 4206727 - 4206788
Alignment:
Q  150 aatgtcatgtctcctaggtccatgaatgttgtgtttacgatgattagttttgccatccaaaa 211  Q
    ||||||||||| |||||||| |||||| | |||||||||| |||| ||||||||||||||||    
T  4206727 aatgtcatgtcacctaggtcaatgaatatagtgtttacgaggattggttttgccatccaaaa 4206788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 166 - 215
Target Start/End: Complemental strand, 7749441 - 7749392
Alignment:
Q  166 ggtccatgaatgttgtgtttacgatgattagttttgccatccaaaaaggt 215  Q
    |||||||||||||||||||||||| |||| |||||||||||| |||||||    
T  7749441 ggtccatgaatgttgtgtttacgaggattggttttgccatcctaaaaggt 7749392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 24 - 104
Target Start/End: Complemental strand, 6225190 - 6225110
Alignment:
Q  24 tgcgtcaagcaaagtggcccaacatgagaaagtgtgttctgacaatcaacatgcttttataccatttgtttttgacacttt 104  Q
    ||||||||  ||||||| | ||||||||||| | |||| ||||||||||||||||| |||  ||||||| |||||||||||    
T  6225190 tgcgtcaaataaagtggtcaaacatgagaaattttgttgtgacaatcaacatgcttatatgtcatttgtgtttgacacttt 6225110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 150 - 214
Target Start/End: Complemental strand, 34168896 - 34168833
Alignment:
Q  150 aatgtcatgtctcctaggtccatgaatgttgtgtttacgatgattagttttgccatccaaaaagg 214  Q
    ||||||||| ||||||| ||||||||||||||| |||||| |||| ||||||| |||||||||||    
T  34168896 aatgtcatgactcctagatccatgaatgttgtg-ttacgaggattggttttgctatccaaaaagg 34168833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 150 - 211
Target Start/End: Original strand, 4166053 - 4166114
Alignment:
Q  150 aatgtcatgtctcctaggtccatgaatgttgtgtttacgatgattagttttgccatccaaaa 211  Q
    ||||||||||| |||||||| || ||| | |||||||||| |||| ||||||||||||||||    
T  4166053 aatgtcatgtcacctaggtcaataaatatagtgtttacgaggattggttttgccatccaaaa 4166114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 58 - 151
Target Start/End: Original strand, 26225602 - 26225695
Alignment:
Q  58 tgttctgacaatcaacatgcttttataccatttgtttttgacactttcagttttctagcaccagaggttgttgaacattcacatagagttcaaa 151  Q
    |||||||||||||||||||||||| ||||| || | ||||||| |||  | |||||||||| ||| |||||||  | |  ||||||||||||||    
T  26225602 tgttctgacaatcaacatgcttttttaccagttatgtttgacatttttggctttctagcactagatgttgttggccttcaacatagagttcaaa 26225695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 150 - 187
Target Start/End: Original strand, 29338210 - 29338247
Alignment:
Q  150 aatgtcatgtctcctaggtccatgaatgttgtgtttac 187  Q
    ||||||||| ||||||||||||||||||||||||||||    
T  29338210 aatgtcatgactcctaggtccatgaatgttgtgtttac 29338247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 154 - 215
Target Start/End: Complemental strand, 34304468 - 34304407
Alignment:
Q  154 tcatgtctcctaggtccatgaatgttgtgtttacgatgattagttttgccatccaaaaaggt 215  Q
    ||||||||| |||||| ||||||||||| ||||||| ||||  |||||| ||||||||||||    
T  34304468 tcatgtctcataggtctatgaatgttgtatttacgaggattgattttgcaatccaaaaaggt 34304407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 44 - 104
Target Start/End: Complemental strand, 3715015 - 3714955
Alignment:
Q  44 aacatgagaaagtgtgttctgacaatcaacatgcttttataccatttgtttttgacacttt 104  Q
    |||||||||||  ||||||| ||||| |||||| ||||||| ||| |||||||||||||||    
T  3715015 aacatgagaaaacgtgttctcacaattaacatgtttttatatcatctgtttttgacacttt 3714955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 26 - 104
Target Start/End: Original strand, 28008978 - 28009059
Alignment:
Q  26 cgtcaagcaaagtggcccaacatgagaaagtgtgttctgacaatc---aacatgcttttataccatttgtttttgacacttt 104  Q
    |||||||||||| || | ||||||||||||  |||||| ||||||   || ||| |||||||||||||| ||||||||||||    
T  28008978 cgtcaagcaaagcggtcaaacatgagaaagcttgttctaacaatcaagaatatggttttataccatttgcttttgacacttt 28009059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 151 - 213
Target Start/End: Complemental strand, 28625906 - 28625844
Alignment:
Q  151 atgtcatgtctcctaggtccatgaatgttgtgtttacgatgattagttttgccatccaaaaag 213  Q
    ||||||| |||| |||||| ||||||||||||||||||  ||||  ||||||||| |||||||    
T  28625906 atgtcatatctcataggtctatgaatgttgtgtttacggagattgattttgccattcaaaaag 28625844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 24 - 89
Target Start/End: Complemental strand, 12401449 - 12401384
Alignment:
Q  24 tgcgtcaagcaaagtggcccaacatgagaaagtgtgttctgacaatcaacatgcttttataccatt 89  Q
    |||||||| |||||||||| ||||| ||| || ||||| ||  ||||||||||||| |||||||||    
T  12401449 tgcgtcaaacaaagtggccaaacataagatagcgtgttttgctaatcaacatgcttatataccatt 12401384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 214
Target Start/End: Original strand, 28009118 - 28009182
Alignment:
Q  150 aatgtcatgtctcctaggtccatgaatgttgtgtttacgatgattagttttgccatccaaaaagg 214  Q
    ||||||||| |||||||||||||||| ||||| ||||| |  |||  |||||| |||||||||||    
T  28009118 aatgtcatgactcctaggtccatgaacgttgtctttaccagaattgattttgcaatccaaaaagg 28009182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 72; Significance: 7e-33; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 23 - 215
Target Start/End: Complemental strand, 103224 - 103017
Alignment:
Q  23 ctgcgtcaagcaaagtggcccaacatgagaaagtgtgttctgacaatcaacatgcttttataccatttgtttttgacactttcagttttctagcaccaga 122  Q
    |||||||||| ||  ||||| |||| ||||||| |||| |||||||||||||||||||||||||||||| ||||||||||||| |||| |||||||||||    
T  103224 ctgcgtcaagtaagatggccaaacacgagaaagcgtgt-ctgacaatcaacatgcttttataccatttgcttttgacactttcggtttcctagcaccaga 103126  T
Q  123 ggttgttgaacattcacatagagttca----------------aatgtcatgtctcctaggtccatgaatgttgtgtttacgatgattagttttgccatc 206  Q
    || |||||| | |  |||| ||| |||                |||||| ||||||||||||||||||||||||||||||||| |||| |||||||||||    
T  103125 ggctgttgaccttctacatcgagctcaaaaggtcatgcataacaatgtcgtgtctcctaggtccatgaatgttgtgtttacgaggattggttttgccatc 103026  T
Q  207 caaaaaggt 215  Q
    |||||||||    
T  103025 caaaaaggt 103017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0148 (Bit Score: 68; Significance: 2e-30; HSPs: 2)
Name: scaffold0148
Description:

Target: scaffold0148; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 28 - 151
Target Start/End: Complemental strand, 33364 - 33241
Alignment:
Q  28 tcaagcaaagtggcccaacatgagaaagtgtgttctgacaatcaacatgcttttataccatttgtttttgacactttcagttttctagcaccagaggttg 127  Q
    ||||||||||||||  |||||||||||| |||||||||||||||||||| |||||||||||||  |||||||| |||| |||| ||| ||||||||||||    
T  33364 tcaagcaaagtggctaaacatgagaaagcgtgttctgacaatcaacatgtttttataccatttacttttgacattttcggtttcctaacaccagaggttg 33265  T
Q  128 ttgaacattcacatagagttcaaa 151  Q
    |||| | |  ||||||||||||||    
T  33264 ttgaccttctacatagagttcaaa 33241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0148; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 156 - 214
Target Start/End: Complemental strand, 33220 - 33162
Alignment:
Q  156 atgtctcctaggtccatgaatgttgtgtttacgatgattagttttgccatccaaaaagg 214  Q
    |||||||||||||||||||| || |||||||||| ||||  ||||| ||||||||||||    
T  33220 atgtctcctaggtccatgaacgtcgtgtttacgaggattgattttgtcatccaaaaagg 33162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0470 (Bit Score: 61; Significance: 3e-26; HSPs: 1)
Name: scaffold0470
Description:

Target: scaffold0470; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 44 - 227
Target Start/End: Complemental strand, 7700 - 7502
Alignment:
Q  44 aacatgagaaagtgtgttctgacaatcaacatgcttttataccatttgtttttgacactttcagttttctagcaccagaggttgttgaacattcacatag 143  Q
    |||||||||||| ||||||| |||||||||||| ||||| |||||||| |||||||||||||||||| ||||| |||||| ||||||| | ||  |||||    
T  7700 aacatgagaaagcgtgttctcacaatcaacatgattttaaaccatttgcttttgacactttcagtttcctagctccagagattgttgaccttttgcatag 7601  T
Q  144 agttca---------------aatgtcatgtctcctaggtccatgaatgttgtgtttacgatgattagttttgccatccaaaaaggtttaactgcacag 227  Q
     |||||               ||||||||||||| |||||||||||||||| |||||||||  ||| |||||| ||||||||||| | |||| ||||||    
T  7600 cgttcaaaaggtcatgcatataatgtcatgtctcataggtccatgaatgttatgtttacgagtattggttttgtcatccaaaaagatctaacggcacag 7502  T

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Target: scaffold0186 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0186
Description:

Target: scaffold0186; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 24 - 131
Target Start/End: Complemental strand, 10482 - 10371
Alignment:
Q  24 tgcgtcaagcaaagtggcccaacatgagaaagtgtgttctgacaatcaa----catgcttttataccatttgtttttgacactttcagttttctagcacc 119  Q
    ||||||||| ||| ||||| ||||||| || | ||||||||||||||||    ||||||||||||||||||| |||||||||||   | || ||||||||    
T  10482 tgcgtcaagtaaaatggccaaacatgataatgcgtgttctgacaatcaatcaacatgcttttataccatttgcttttgacacttgtggcttcctagcacc 10383  T
Q  120 agaggttgttga 131  Q
    ||||||||||||    
T  10382 agaggttgttga 10371  T

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Target: scaffold0110 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 24 - 105
Target Start/End: Original strand, 47528 - 47609
Alignment:
Q  24 tgcgtcaagcaaagtggcccaacatgagaaagtgtgttctgacaatcaacatgcttttataccatttgtttttgacactttc 105  Q
    ||||||||| ||| ||||| ||||||||||| |||||||||||| | |||||  |||||||||||||| |||| ||||||||    
T  47528 tgcgtcaagtaaaatggccaaacatgagaaaatgtgttctgacagttaacatatttttataccatttgcttttaacactttc 47609  T

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Target: scaffold0031 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 48 - 105
Target Start/End: Complemental strand, 49505 - 49448
Alignment:
Q  48 tgagaaagtgtgttctgacaatcaacatgcttttataccatttgtttttgacactttc 105  Q
    |||||||  ||||||||||||||||| ||||||||||||||||| |||||||||||||    
T  49505 tgagaaatcgtgttctgacaatcaacgtgcttttataccatttgcttttgacactttc 49448  T

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Target: scaffold0493 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0493
Description:

Target: scaffold0493; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 44 - 128
Target Start/End: Original strand, 8525 - 8609
Alignment:
Q  44 aacatgagaaagtgtgttctgacaatcaacatgcttttataccatttgtttttgacactttcagttttctagcaccagaggttgt 128  Q
    |||||||||||   ||||||||||||||||||| ||||||||||||||  ||| |||||||  |||| ||||||| |||||||||    
T  8525 aacatgagaaaacatgttctgacaatcaacatgtttttataccatttgcgtttaacacttttggtttcctagcactagaggttgt 8609  T

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Target: scaffold0361 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 157 - 210
Target Start/End: Original strand, 17415 - 17468
Alignment:
Q  157 tgtctcctaggtccatgaatgttgtgtttacgatgattagttttgccatccaaa 210  Q
    |||||| ||||||||||||||||||||||| |||||||  |||||| |||||||    
T  17415 tgtctcttaggtccatgaatgttgtgtttaagatgattgcttttgctatccaaa 17468  T

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Target: scaffold0119 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 85
Target Start/End: Complemental strand, 16258 - 16191
Alignment:
Q  18 aaaacctgcgtcaagcaaagtggcccaacatgagaaagtgtgttctgacaatcaacatgcttttatac 85  Q
    |||| ||||||||| |||| ||||| |||||||||||   |||||||||||| |||||| ||||||||    
T  16258 aaaagctgcgtcaaacaaaatggccaaacatgagaaaacatgttctgacaataaacatgtttttatac 16191  T

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Target: scaffold0514 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0514
Description:

Target: scaffold0514; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 206
Target Start/End: Original strand, 4378 - 4434
Alignment:
Q  150 aatgtcatgtctcctaggtccatgaatgttgtgtttacgatgattagttttgccatc 206  Q
    ||||||||||||| || |||||| ||||||||||||||||  ||| |||||| ||||    
T  4378 aatgtcatgtctcataagtccataaatgttgtgtttacgaatattggttttgtcatc 4434  T

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Target: scaffold0224 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0224
Description:

Target: scaffold0224; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 104
Target Start/End: Original strand, 18358 - 18433
Alignment:
Q  28 tcaagcaaagtggcccaacatgagaaagtgtgttctgacaatcaacatgcttttataccatttgtttttgacacttt 104  Q
    |||| ||||| |||| |||||||||||  ||||||| |||||||||||| ||||||  ||| || ||||||||||||    
T  18358 tcaaacaaagcggccaaacatgagaaac-gtgttctcacaatcaacatgtttttatgtcatctgcttttgacacttt 18433  T

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Target: scaffold0013 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 165 - 213
Target Start/End: Original strand, 52663 - 52711
Alignment:
Q  165 aggtccatgaatgttgtgtttacgatgattagttttgccatccaaaaag 213  Q
    |||||||||||| ||||||||| || |||||||||||  ||||||||||    
T  52663 aggtccatgaatattgtgtttatgaagattagttttgttatccaaaaag 52711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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