View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19289_high_80 (Length: 230)

Name: NF19289_high_80
Description: NF19289
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19289_high_80
NF19289_high_80
[»] scaffold0044 (2 HSPs)
scaffold0044 (18-153)||(4669-4804)
scaffold0044 (40-179)||(41237-41376)
[»] chr2 (56 HSPs)
chr2 (62-213)||(27845521-27845672)
chr2 (138-214)||(21238247-21238323)
chr2 (138-214)||(21240797-21240873)
chr2 (138-215)||(31756822-31756899)
chr2 (138-215)||(41683900-41683977)
chr2 (65-150)||(18546143-18546228)
chr2 (138-215)||(44621832-44621909)
chr2 (47-213)||(25109739-25109904)
chr2 (43-213)||(23005617-23005786)
chr2 (68-213)||(26393292-26393436)
chr2 (138-215)||(12627050-12627127)
chr2 (138-215)||(24505604-24505681)
chr2 (62-150)||(39827195-39827283)
chr2 (62-210)||(43946460-43946606)
chr2 (62-149)||(34137828-34137915)
chr2 (138-204)||(31504501-31504567)
chr2 (138-204)||(31507067-31507133)
chr2 (95-213)||(22458624-22458745)
chr2 (83-152)||(19672753-19672822)
chr2 (62-150)||(24682190-24682278)
chr2 (83-213)||(23792179-23792310)
chr2 (62-168)||(6726801-6726907)
chr2 (62-152)||(22106219-22106309)
chr2 (84-213)||(24941586-24941714)
chr2 (69-150)||(7187395-7187476)
chr2 (94-150)||(23079874-23079930)
chr2 (62-150)||(23932214-23932302)
chr2 (62-150)||(32214250-32214338)
chr2 (69-168)||(22172962-22173060)
chr2 (62-153)||(24918894-24918985)
chr2 (57-213)||(34401674-34401830)
chr2 (40-179)||(18809780-18809919)
chr2 (40-179)||(23711199-23711338)
chr2 (145-213)||(24688390-24688459)
chr2 (40-179)||(32038683-32038822)
chr2 (84-169)||(43138262-43138347)
chr2 (56-151)||(22695188-22695284)
chr2 (62-150)||(45027220-45027308)
chr2 (57-179)||(23131716-23131838)
chr2 (57-179)||(23134183-23134305)
chr2 (40-169)||(24899873-24900003)
chr2 (40-169)||(24902350-24902480)
chr2 (40-169)||(24904827-24904957)
chr2 (40-169)||(24907302-24907432)
chr2 (109-179)||(20309971-20310041)
chr2 (132-210)||(22730377-22730454)
chr2 (40-148)||(24897411-24897520)
chr2 (132-213)||(12900506-12900589)
chr2 (99-195)||(20519277-20519373)
chr2 (65-150)||(23706346-23706431)
chr2 (40-179)||(26506216-26506355)
chr2 (40-179)||(27919950-27920089)
chr2 (40-213)||(28577942-28578114)
chr2 (40-179)||(39683153-39683292)
chr2 (109-169)||(31346130-31346190)
chr2 (101-153)||(37380508-37380560)
[»] scaffold0422 (1 HSPs)
scaffold0422 (123-215)||(3985-4077)
[»] scaffold0123 (1 HSPs)
scaffold0123 (43-213)||(25945-26113)
[»] chr8 (67 HSPs)
chr8 (44-213)||(24353912-24354079)
chr8 (138-215)||(21414366-21414443)
chr8 (138-215)||(24706947-24707024)
chr8 (40-213)||(16800303-16800473)
chr8 (138-215)||(22144524-22144601)
chr8 (138-215)||(44432972-44433049)
chr8 (40-168)||(22526353-22526478)
chr8 (138-215)||(7300202-7300279)
chr8 (138-215)||(10834043-10834120)
chr8 (138-215)||(17615821-17615898)
chr8 (62-210)||(28398452-28398598)
chr8 (62-168)||(19936223-19936326)
chr8 (62-157)||(22245230-22245325)
chr8 (62-157)||(22252308-22252403)
chr8 (43-213)||(17438602-17438770)
chr8 (74-213)||(22365531-22365670)
chr8 (62-150)||(20501230-20501318)
chr8 (86-213)||(22996699-22996827)
chr8 (138-204)||(6607408-6607474)
chr8 (83-169)||(13507213-13507299)
chr8 (83-169)||(13596745-13596831)
chr8 (66-143)||(17085077-17085154)
chr8 (66-143)||(17085311-17085388)
chr8 (57-213)||(17266080-17266235)
chr8 (69-150)||(22184011-22184092)
chr8 (40-213)||(22984508-22984678)
chr8 (62-153)||(24049364-24049455)
chr8 (62-168)||(20404033-20404139)
chr8 (62-168)||(32810448-32810554)
chr8 (40-168)||(45289744-45289872)
chr8 (62-151)||(40492027-40492115)
chr8 (62-213)||(1326383-1326533)
chr8 (62-150)||(19154012-19154100)
chr8 (43-150)||(14102352-14102456)
chr8 (69-152)||(23661266-23661349)
chr8 (84-213)||(26220556-26220684)
chr8 (84-213)||(26222269-26222397)
chr8 (69-150)||(2418003-2418082)
chr8 (101-169)||(14396892-14396960)
chr8 (62-150)||(16412635-16412723)
chr8 (86-150)||(17460208-17460272)
chr8 (62-150)||(19897268-19897356)
chr8 (62-153)||(20457432-20457523)
chr8 (62-153)||(27471734-27471825)
chr8 (62-153)||(32122482-32122573)
chr8 (62-213)||(22966818-22966968)
chr8 (40-179)||(1485239-1485378)
chr8 (40-179)||(4484117-4484256)
chr8 (40-179)||(14408630-14408769)
chr8 (40-179)||(14824613-14824752)
chr8 (62-213)||(24485192-24485343)
chr8 (62-150)||(11361271-11361359)
chr8 (40-150)||(20045409-20045520)
chr8 (101-153)||(21999435-21999487)
chr8 (62-153)||(15202303-15202394)
chr8 (86-149)||(22418588-22418651)
chr8 (62-153)||(37609719-37609810)
chr8 (122-168)||(6521259-6521304)
chr8 (40-168)||(18677259-18677387)
chr8 (62-150)||(21697416-21697504)
chr8 (101-150)||(21966701-21966750)
chr8 (86-150)||(20532536-20532600)
chr8 (101-153)||(21979464-21979516)
chr8 (101-153)||(21982949-21983001)
chr8 (101-153)||(22005074-22005126)
chr8 (62-150)||(38549133-38549221)
chr8 (101-153)||(44522176-44522228)
[»] chr7 (74 HSPs)
chr7 (138-215)||(16929194-16929271)
chr7 (138-215)||(35367129-35367206)
chr7 (138-215)||(21064351-21064428)
chr7 (138-215)||(123330-123407)
chr7 (138-215)||(13732675-13732752)
chr7 (138-215)||(48786218-48786295)
chr7 (138-215)||(16007322-16007399)
chr7 (62-151)||(42462835-42462924)
chr7 (62-150)||(16997056-16997144)
chr7 (40-150)||(11768090-11768197)
chr7 (69-150)||(37793392-37793473)
chr7 (62-150)||(9176835-9176922)
chr7 (62-213)||(16496258-16496407)
chr7 (43-166)||(14037064-14037185)
chr7 (43-166)||(14347094-14347215)
chr7 (43-168)||(15117335-15117458)
chr7 (43-213)||(16324817-16324987)
chr7 (67-157)||(38519652-38519742)
chr7 (62-151)||(129942-130030)
chr7 (84-213)||(3387452-3387579)
chr7 (40-179)||(27217699-27217837)
chr7 (43-150)||(14045636-14045741)
chr7 (43-150)||(14355666-14355771)
chr7 (86-213)||(17052696-17052826)
chr7 (115-213)||(47832692-47832790)
chr7 (62-152)||(5294430-5294520)
chr7 (68-150)||(11524799-11524881)
chr7 (40-168)||(13870183-13870311)
chr7 (69-150)||(18455590-18455671)
chr7 (62-150)||(8941228-8941316)
chr7 (62-213)||(9944948-9945098)
chr7 (84-168)||(10062865-10062949)
chr7 (86-150)||(17016597-17016661)
chr7 (62-149)||(11973109-11973196)
chr7 (122-213)||(12902293-12902386)
chr7 (115-213)||(15440214-15440311)
chr7 (40-150)||(26355194-26355304)
chr7 (40-150)||(26357646-26357756)
chr7 (62-152)||(5295603-5295693)
chr7 (62-152)||(5296776-5296866)
chr7 (95-168)||(15113858-15113932)
chr7 (84-213)||(48274487-48274615)
chr7 (40-179)||(457160-457299)
chr7 (40-136)||(9032530-9032623)
chr7 (48-153)||(14156389-14156493)
chr7 (40-179)||(15375899-15376038)
chr7 (40-179)||(20384309-20384448)
chr7 (40-179)||(41523757-41523896)
chr7 (62-150)||(8469296-8469384)
chr7 (40-179)||(11392488-11392625)
chr7 (62-150)||(14269084-14269172)
chr7 (104-213)||(18304654-18304763)
chr7 (62-150)||(23461633-23461721)
chr7 (101-153)||(42374302-42374354)
chr7 (132-213)||(33981-34060)
chr7 (101-168)||(1856383-1856450)
chr7 (101-152)||(13648284-13648335)
chr7 (101-168)||(13917555-13917622)
chr7 (73-210)||(15007589-15007726)
chr7 (56-213)||(18628419-18628576)
chr7 (132-213)||(12724405-12724486)
chr7 (44-150)||(14317516-14317621)
chr7 (62-179)||(16410919-16411036)
chr7 (132-213)||(16906351-16906432)
chr7 (101-151)||(19485972-19486022)
chr7 (62-168)||(21188907-21189013)
chr7 (111-168)||(17180512-17180568)
chr7 (101-169)||(25926280-25926349)
chr7 (40-179)||(41526219-41526358)
chr7 (122-213)||(9388856-9388946)
chr7 (104-213)||(9750688-9750797)
chr7 (101-153)||(10500732-10500784)
chr7 (101-153)||(13893449-13893501)
chr7 (62-150)||(45846765-45846853)
[»] scaffold0586 (1 HSPs)
scaffold0586 (138-215)||(4799-4876)
[»] chr5 (49 HSPs)
chr5 (138-215)||(22588872-22588949)
chr5 (138-215)||(4398612-4398689)
chr5 (138-215)||(16255075-16255152)
chr5 (138-215)||(16258708-16258785)
chr5 (138-215)||(22592427-22592504)
chr5 (138-215)||(22595982-22596059)
chr5 (138-215)||(22881090-22881167)
chr5 (138-215)||(29324360-29324437)
chr5 (138-214)||(26496788-26496864)
chr5 (68-213)||(26739735-26739879)
chr5 (73-213)||(22177282-22177423)
chr5 (138-215)||(26360244-26360322)
chr5 (40-117)||(25744603-25744679)
chr5 (66-151)||(23470660-23470745)
chr5 (40-213)||(20572706-20572876)
chr5 (88-213)||(21327360-21327485)
chr5 (67-151)||(23476373-23476457)
chr5 (62-146)||(25573581-25573665)
chr5 (62-145)||(25576010-25576093)
chr5 (40-150)||(14048931-14049040)
chr5 (62-152)||(36315409-36315498)
chr5 (42-152)||(41094816-41094925)
chr5 (68-145)||(26731989-26732066)
chr5 (62-150)||(15797305-15797393)
chr5 (62-145)||(25574817-25574900)
chr5 (62-213)||(2153890-2154040)
chr5 (69-168)||(22413056-22413154)
chr5 (84-169)||(18318166-18318250)
chr5 (57-168)||(23065370-23065481)
chr5 (73-168)||(27988086-27988181)
chr5 (62-150)||(29330727-29330815)
chr5 (56-171)||(40723440-40723555)
chr5 (56-213)||(39245989-39246146)
chr5 (62-168)||(20917149-20917255)
chr5 (62-151)||(41860580-41860669)
chr5 (62-150)||(17516290-17516378)
chr5 (62-150)||(24473828-24473916)
chr5 (132-213)||(13026163-13026244)
chr5 (132-213)||(13096347-13096428)
chr5 (84-150)||(20765230-20765296)
chr5 (40-169)||(31062187-31062312)
chr5 (96-213)||(20026010-20026127)
chr5 (122-179)||(21870773-21870830)
chr5 (122-179)||(21875053-21875110)
chr5 (40-179)||(29346818-29346957)
chr5 (40-179)||(29349291-29349430)
chr5 (40-179)||(29351764-29351903)
chr5 (101-150)||(40726683-40726732)
chr5 (101-153)||(18419454-18419506)
[»] chr4 (49 HSPs)
chr4 (138-215)||(41792575-41792652)
chr4 (138-215)||(287995-288072)
chr4 (138-215)||(1101700-1101777)
chr4 (138-215)||(13043704-13043781)
chr4 (138-215)||(15279235-15279312)
chr4 (138-215)||(47125963-47126040)
chr4 (62-150)||(15792658-15792746)
chr4 (40-213)||(26790200-26790368)
chr4 (138-211)||(55501890-55501963)
chr4 (62-151)||(26049619-26049708)
chr4 (138-215)||(27028786-27028863)
chr4 (62-150)||(14852024-14852112)
chr4 (62-150)||(32306152-32306240)
chr4 (138-204)||(14699618-14699684)
chr4 (83-169)||(53081284-53081370)
chr4 (40-150)||(12841508-12841616)
chr4 (69-150)||(14825984-14826062)
chr4 (62-152)||(363127-363217)
chr4 (56-150)||(19617395-19617489)
chr4 (62-168)||(52313508-52313614)
chr4 (69-150)||(12611880-12611961)
chr4 (69-150)||(23802406-23802487)
chr4 (40-179)||(12032957-12033096)
chr4 (62-150)||(15489469-15489557)
chr4 (86-150)||(17334185-17334249)
chr4 (69-168)||(51463012-51463111)
chr4 (96-213)||(15372039-15372155)
chr4 (84-150)||(54797886-54797952)
chr4 (40-179)||(15117538-15117677)
chr4 (128-177)||(39705461-39705509)
chr4 (40-179)||(1836706-1836843)
chr4 (65-153)||(3515764-3515852)
chr4 (40-179)||(7640372-7640511)
chr4 (62-213)||(18214462-18214612)
chr4 (40-179)||(29268193-29268332)
chr4 (62-150)||(52872402-52872490)
chr4 (96-213)||(10961-11078)
chr4 (40-151)||(14651567-14651677)
chr4 (62-152)||(19243562-19243653)
chr4 (62-168)||(11750-11856)
chr4 (132-213)||(12903646-12903727)
chr4 (132-213)||(16239181-16239262)
chr4 (62-146)||(3485828-3485913)
chr4 (84-201)||(14281254-14281369)
chr4 (62-150)||(15354846-15354935)
chr4 (64-157)||(16043924-16044017)
chr4 (101-150)||(22354671-22354720)
chr4 (62-213)||(14969965-14970115)
chr4 (132-213)||(43255311-43255392)
[»] chr1 (53 HSPs)
chr1 (62-213)||(21683860-21684012)
chr1 (138-215)||(14431492-14431569)
chr1 (138-215)||(20632221-20632298)
chr1 (138-215)||(22899393-22899470)
chr1 (138-215)||(36182480-36182557)
chr1 (138-215)||(37359373-37359450)
chr1 (138-215)||(20580369-20580446)
chr1 (138-215)||(45495294-45495371)
chr1 (138-215)||(24088320-24088397)
chr1 (62-150)||(47191465-47191553)
chr1 (62-168)||(15859300-15859403)
chr1 (58-157)||(21042498-21042597)
chr1 (43-213)||(50687457-50687626)
chr1 (62-151)||(22125162-22125251)
chr1 (77-213)||(22777340-22777476)
chr1 (43-152)||(27652390-27652497)
chr1 (62-150)||(21342956-21343043)
chr1 (62-150)||(21347821-21347908)
chr1 (62-169)||(14294709-14294815)
chr1 (67-150)||(20958998-20959081)
chr1 (62-169)||(51131421-51131527)
chr1 (65-150)||(52940027-52940112)
chr1 (64-150)||(16382001-16382087)
chr1 (44-150)||(48521359-48521463)
chr1 (56-168)||(20453619-20453731)
chr1 (113-213)||(41049110-41049209)
chr1 (99-213)||(26065861-26065976)
chr1 (101-168)||(22130009-22130075)
chr1 (100-209)||(50613179-50613289)
chr1 (100-209)||(50621007-50621117)
chr1 (69-150)||(13880538-13880619)
chr1 (40-150)||(14237655-14237766)
chr1 (62-150)||(46560042-46560130)
chr1 (40-150)||(51083115-51083226)
chr1 (62-153)||(22050347-22050438)
chr1 (62-212)||(40390158-40390306)
chr1 (57-213)||(48444349-48444505)
chr1 (62-168)||(22122149-22122255)
chr1 (62-168)||(41230922-41231028)
chr1 (40-179)||(13989703-13989842)
chr1 (56-152)||(41373327-41373424)
chr1 (103-167)||(45574003-45574067)
chr1 (62-153)||(29298995-29299086)
chr1 (95-150)||(43629297-43629352)
chr1 (43-168)||(12272435-12272558)
chr1 (57-150)||(16362774-16362868)
chr1 (40-152)||(23592942-23593055)
chr1 (62-150)||(13212192-13212280)
chr1 (40-179)||(21474270-21474409)
chr1 (40-179)||(21922475-21922614)
chr1 (62-150)||(9044518-9044606)
chr1 (62-150)||(16274573-16274661)
chr1 (122-213)||(49262015-49262105)
[»] scaffold0106 (1 HSPs)
scaffold0106 (62-146)||(18857-18941)
[»] scaffold0023 (2 HSPs)
scaffold0023 (138-213)||(163374-163449)
scaffold0023 (40-179)||(95248-95387)
[»] scaffold0004 (1 HSPs)
scaffold0004 (67-150)||(333206-333289)
[»] scaffold0046 (2 HSPs)
scaffold0046 (48-211)||(25212-25373)
scaffold0046 (48-150)||(16085-16186)
[»] scaffold0525 (2 HSPs)
scaffold0525 (138-215)||(7544-7621)
scaffold0525 (138-215)||(10075-10152)
[»] scaffold0021 (1 HSPs)
scaffold0021 (138-215)||(133109-133186)
[»] scaffold0003 (1 HSPs)
scaffold0003 (138-215)||(253696-253773)
[»] chr6 (59 HSPs)
chr6 (138-215)||(8523835-8523912)
chr6 (138-215)||(16830701-16830778)
chr6 (138-215)||(22593185-22593262)
chr6 (138-215)||(29493658-29493735)
chr6 (64-150)||(23527300-23527386)
chr6 (40-150)||(18697374-18697482)
chr6 (68-210)||(22792372-22792512)
chr6 (62-157)||(17229057-17229152)
chr6 (40-150)||(18707125-18707233)
chr6 (62-213)||(19363330-19363480)
chr6 (62-152)||(18454091-18454181)
chr6 (62-150)||(18895486-18895571)
chr6 (62-150)||(23539794-23539882)
chr6 (68-151)||(20137544-20137627)
chr6 (68-151)||(22195242-22195325)
chr6 (40-146)||(13612322-13612427)
chr6 (81-213)||(20555972-20556103)
chr6 (62-150)||(19024260-19024347)
chr6 (62-150)||(23077587-23077675)
chr6 (62-150)||(23992983-23993071)
chr6 (86-213)||(33443950-33444081)
chr6 (62-150)||(35012025-35012113)
chr6 (84-212)||(16447693-16447820)
chr6 (69-150)||(14978543-14978624)
chr6 (84-212)||(19102401-19102528)
chr6 (69-150)||(25618900-25618981)
chr6 (40-179)||(8055868-8056006)
chr6 (40-179)||(12743157-12743296)
chr6 (62-150)||(17027864-17027952)
chr6 (62-150)||(25535969-25536057)
chr6 (62-150)||(25689387-25689475)
chr6 (62-150)||(25721059-25721147)
chr6 (62-150)||(25753402-25753490)
chr6 (62-150)||(25755572-25755660)
chr6 (62-150)||(34963934-34964022)
chr6 (40-150)||(17882710-17882820)
chr6 (62-153)||(31629858-31629949)
chr6 (62-168)||(1598995-1599101)
chr6 (101-213)||(23531834-23531945)
chr6 (62-168)||(30676022-30676127)
chr6 (57-122)||(18198611-18198675)
chr6 (40-179)||(18333778-18333917)
chr6 (84-149)||(21119807-21119872)
chr6 (40-179)||(22783065-22783204)
chr6 (103-210)||(23415906-23416011)
chr6 (40-179)||(24423384-24423523)
chr6 (40-179)||(33865115-33865254)
chr6 (62-150)||(16198359-16198447)
chr6 (101-153)||(17201077-17201129)
chr6 (84-179)||(3850968-3851062)
chr6 (56-150)||(18343044-18343139)
chr6 (101-179)||(8226712-8226789)
chr6 (40-179)||(26923631-26923770)
chr6 (132-213)||(28495609-28495688)
chr6 (115-210)||(18231684-18231780)
chr6 (62-150)||(18914879-18914966)
chr6 (101-153)||(25739324-25739376)
chr6 (132-213)||(27415094-27415175)
chr6 (101-169)||(27557665-27557733)
[»] chr3 (65 HSPs)
chr3 (138-215)||(2037628-2037705)
chr3 (138-215)||(2041369-2041446)
chr3 (138-215)||(10988747-10988824)
chr3 (138-215)||(14039082-14039159)
chr3 (138-215)||(14042550-14042627)
chr3 (138-215)||(39231629-39231706)
chr3 (138-215)||(54974288-54974365)
chr3 (138-215)||(54976898-54976975)
chr3 (138-215)||(54979508-54979585)
chr3 (43-168)||(43927952-43928076)
chr3 (138-215)||(2034121-2034198)
chr3 (138-215)||(602779-602856)
chr3 (138-214)||(7633269-7633345)
chr3 (62-150)||(9578509-9578597)
chr3 (43-150)||(325025-325130)
chr3 (43-150)||(12386275-12386381)
chr3 (56-213)||(19039459-19039614)
chr3 (68-150)||(15207805-15207887)
chr3 (86-213)||(13919756-13919886)
chr3 (74-169)||(23275541-23275635)
chr3 (64-151)||(32402181-32402268)
chr3 (138-212)||(15009299-15009373)
chr3 (42-152)||(44495482-44495590)
chr3 (62-213)||(17738145-17738294)
chr3 (68-126)||(15266050-15266108)
chr3 (84-212)||(36167535-36167662)
chr3 (86-150)||(11202209-11202273)
chr3 (62-146)||(28195495-28195578)
chr3 (43-150)||(21838320-21838425)
chr3 (62-168)||(13937276-13937382)
chr3 (62-168)||(41124693-41124799)
chr3 (62-151)||(12119184-12119273)
chr3 (62-150)||(10557692-10557779)
chr3 (101-157)||(13522195-13522251)
chr3 (62-150)||(24514237-24514325)
chr3 (96-168)||(53300808-53300879)
chr3 (95-150)||(45219412-45219467)
chr3 (101-171)||(5224325-5224394)
chr3 (84-150)||(21619386-21619452)
chr3 (101-213)||(22146706-22146817)
chr3 (62-167)||(17444066-17444171)
chr3 (40-179)||(17464015-17464154)
chr3 (81-150)||(24152386-24152455)
chr3 (40-179)||(34160163-34160302)
chr3 (68-152)||(605520-605603)
chr3 (40-179)||(13150974-13151113)
chr3 (40-179)||(13153442-13153581)
chr3 (40-213)||(15978372-15978545)
chr3 (62-150)||(20629512-20629600)
chr3 (100-168)||(22109464-22109531)
chr3 (99-213)||(37250255-37250369)
chr3 (69-201)||(50243782-50243912)
chr3 (62-150)||(55318624-55318712)
chr3 (56-150)||(6468348-6468443)
chr3 (57-179)||(10246908-10247030)
chr3 (101-168)||(26054417-26054484)
chr3 (132-213)||(15618252-15618333)
chr3 (62-168)||(16282060-16282166)
chr3 (101-151)||(37641503-37641553)
chr3 (67-168)||(38961139-38961240)
chr3 (40-179)||(55477329-55477468)
chr3 (62-150)||(10379893-10379981)
chr3 (101-153)||(16828278-16828330)
chr3 (114-213)||(23317873-23317973)
chr3 (40-213)||(45577593-45577766)
[»] scaffold0022 (3 HSPs)
scaffold0022 (62-210)||(128038-128185)
scaffold0022 (99-201)||(81191-81291)
scaffold0022 (95-213)||(117445-117562)
[»] scaffold0395 (1 HSPs)
scaffold0395 (138-215)||(7680-7757)
[»] scaffold0090 (1 HSPs)
scaffold0090 (68-205)||(2902-3038)
[»] scaffold0131 (1 HSPs)
scaffold0131 (138-215)||(2620-2696)
[»] scaffold0001 (5 HSPs)
scaffold0001 (62-150)||(447377-447465)
scaffold0001 (62-150)||(498287-498375)
scaffold0001 (43-149)||(84457-84560)
scaffold0001 (62-153)||(501818-501909)
scaffold0001 (101-153)||(152108-152160)
[»] scaffold0357 (2 HSPs)
scaffold0357 (43-150)||(4811-4917)
scaffold0357 (122-171)||(14096-14144)
[»] scaffold1419 (1 HSPs)
scaffold1419 (64-150)||(923-1008)
[»] scaffold0169 (1 HSPs)
scaffold0169 (68-150)||(28696-28778)
[»] scaffold0750 (1 HSPs)
scaffold0750 (68-213)||(4507-4655)
[»] scaffold0009 (2 HSPs)
scaffold0009 (62-151)||(191797-191886)
scaffold0009 (43-213)||(86406-86576)
[»] scaffold1835 (1 HSPs)
scaffold1835 (62-150)||(171-259)
[»] scaffold0359 (1 HSPs)
scaffold0359 (40-152)||(16276-16387)
[»] scaffold1403 (1 HSPs)
scaffold1403 (69-213)||(1411-1555)
[»] scaffold0686 (1 HSPs)
scaffold0686 (43-150)||(2126-2232)
[»] scaffold0010 (3 HSPs)
scaffold0010 (73-212)||(59823-59963)
scaffold0010 (63-149)||(7174-7260)
scaffold0010 (69-151)||(1528-1610)
[»] scaffold0914 (1 HSPs)
scaffold0914 (68-150)||(2614-2696)
[»] scaffold0014 (1 HSPs)
scaffold0014 (42-213)||(203473-203647)
[»] scaffold0420 (1 HSPs)
scaffold0420 (57-210)||(5399-5552)
[»] scaffold0180 (2 HSPs)
scaffold0180 (43-150)||(33669-33775)
scaffold0180 (73-150)||(31370-31447)
[»] scaffold0058 (1 HSPs)
scaffold0058 (138-204)||(47548-47614)
[»] scaffold0184 (1 HSPs)
scaffold0184 (62-213)||(185-334)
[»] scaffold0107 (1 HSPs)
scaffold0107 (69-150)||(13552-13633)
[»] scaffold0012 (1 HSPs)
scaffold0012 (62-150)||(220334-220420)
[»] scaffold0138 (1 HSPs)
scaffold0138 (68-210)||(17304-17446)
[»] scaffold0114 (1 HSPs)
scaffold0114 (83-167)||(46225-46309)
[»] scaffold0077 (1 HSPs)
scaffold0077 (62-150)||(54812-54900)
[»] scaffold0011 (1 HSPs)
scaffold0011 (40-150)||(37283-37390)
[»] scaffold0006 (2 HSPs)
scaffold0006 (43-150)||(97893-97999)
scaffold0006 (43-150)||(107171-107277)
[»] scaffold0072 (2 HSPs)
scaffold0072 (62-150)||(58700-58785)
scaffold0072 (43-213)||(62265-62435)
[»] scaffold0040 (4 HSPs)
scaffold0040 (40-145)||(14205-14307)
scaffold0040 (57-157)||(23077-23175)
scaffold0040 (62-150)||(20598-20686)
scaffold0040 (57-213)||(12971-13127)
[»] scaffold0394 (1 HSPs)
scaffold0394 (69-150)||(13019-13100)
[»] scaffold0535 (1 HSPs)
scaffold0535 (62-213)||(7538-7688)
[»] scaffold0254 (2 HSPs)
scaffold0254 (56-179)||(19126-19249)
scaffold0254 (62-152)||(21610-21701)
[»] scaffold0574 (1 HSPs)
scaffold0574 (62-153)||(7205-7296)
[»] scaffold0347 (1 HSPs)
scaffold0347 (67-150)||(9771-9853)
[»] scaffold0282 (1 HSPs)
scaffold0282 (62-157)||(17328-17423)
[»] scaffold0047 (1 HSPs)
scaffold0047 (69-150)||(22794-22872)
[»] scaffold0005 (3 HSPs)
scaffold0005 (69-150)||(13647-13725)
scaffold0005 (73-213)||(268545-268683)
scaffold0005 (40-151)||(165615-165725)
[»] scaffold0290 (1 HSPs)
scaffold0290 (68-150)||(1042-1124)
[»] scaffold0125 (1 HSPs)
scaffold0125 (68-150)||(1051-1133)
[»] scaffold0057 (1 HSPs)
scaffold0057 (68-150)||(72399-72481)
[»] scaffold0054 (1 HSPs)
scaffold0054 (68-150)||(75025-75107)
[»] scaffold0016 (2 HSPs)
scaffold0016 (62-168)||(185023-185129)
scaffold0016 (101-153)||(172106-172158)
[»] scaffold0008 (1 HSPs)
scaffold0008 (84-213)||(72564-72692)
[»] scaffold0737 (1 HSPs)
scaffold0737 (113-213)||(864-963)
[»] scaffold0601 (1 HSPs)
scaffold0601 (69-150)||(7547-7627)
[»] scaffold0139 (1 HSPs)
scaffold0139 (68-169)||(39208-39308)
[»] scaffold0130 (1 HSPs)
scaffold0130 (48-152)||(903-1007)
[»] scaffold0112 (1 HSPs)
scaffold0112 (68-201)||(23075-23206)
[»] scaffold0083 (1 HSPs)
scaffold0083 (81-150)||(42278-42347)
[»] scaffold0076 (1 HSPs)
scaffold0076 (43-152)||(22497-22604)
[»] scaffold0711 (1 HSPs)
scaffold0711 (62-150)||(6897-6985)
[»] scaffold0439 (1 HSPs)
scaffold0439 (101-157)||(12397-12453)
[»] scaffold0322 (1 HSPs)
scaffold0322 (62-150)||(18691-18779)
[»] scaffold0149 (1 HSPs)
scaffold0149 (62-150)||(34250-34338)
[»] scaffold0108 (1 HSPs)
scaffold0108 (61-157)||(3993-4089)
[»] scaffold0035 (2 HSPs)
scaffold0035 (62-150)||(107229-107317)
scaffold0035 (63-150)||(115731-115818)
[»] scaffold0546 (1 HSPs)
scaffold0546 (40-146)||(7874-7981)
[»] scaffold0230 (3 HSPs)
scaffold0230 (40-150)||(14787-14898)
scaffold0230 (62-150)||(22700-22788)
scaffold0230 (62-147)||(20527-20612)
[»] scaffold0109 (1 HSPs)
scaffold0109 (40-146)||(5326-5433)
[»] scaffold0037 (1 HSPs)
scaffold0037 (69-152)||(82967-83050)
[»] scaffold0598 (1 HSPs)
scaffold0598 (109-210)||(206-307)
[»] scaffold0480 (1 HSPs)
scaffold0480 (40-157)||(10278-10394)
[»] scaffold0191 (1 HSPs)
scaffold0191 (62-168)||(3574-3679)
[»] scaffold0117 (1 HSPs)
scaffold0117 (101-201)||(42674-42773)
[»] scaffold0074 (1 HSPs)
scaffold0074 (40-157)||(9049-9166)
[»] scaffold0162 (1 HSPs)
scaffold0162 (96-210)||(25416-25529)
[»] scaffold0134 (1 HSPs)
scaffold0134 (40-179)||(38659-38798)
[»] scaffold1792 (1 HSPs)
scaffold1792 (62-150)||(1112-1200)
[»] scaffold0877 (1 HSPs)
scaffold0877 (86-150)||(2028-2092)
[»] scaffold0716 (1 HSPs)
scaffold0716 (62-150)||(5448-5536)
[»] scaffold0457 (1 HSPs)
scaffold0457 (101-153)||(10895-10947)
[»] scaffold0417 (1 HSPs)
scaffold0417 (62-150)||(493-581)
[»] scaffold0301 (2 HSPs)
scaffold0301 (101-153)||(11319-11371)
scaffold0301 (101-153)||(15719-15771)
[»] scaffold0297 (1 HSPs)
scaffold0297 (40-179)||(2890-3027)
[»] scaffold0200 (1 HSPs)
scaffold0200 (101-169)||(18596-18664)
[»] scaffold0145 (1 HSPs)
scaffold0145 (86-150)||(10725-10789)
[»] scaffold0142 (1 HSPs)
scaffold0142 (104-213)||(1573-1682)
[»] scaffold0019 (2 HSPs)
scaffold0019 (40-150)||(158622-158733)
scaffold0019 (62-150)||(21926-22014)
[»] scaffold1439 (1 HSPs)
scaffold1439 (69-152)||(1045-1128)
[»] scaffold0500 (1 HSPs)
scaffold0500 (40-151)||(8338-8448)
[»] scaffold0075 (2 HSPs)
scaffold0075 (122-210)||(7447-7534)
scaffold0075 (96-213)||(50684-50801)
[»] scaffold0042 (1 HSPs)
scaffold0042 (62-149)||(43169-43256)
[»] scaffold0007 (1 HSPs)
scaffold0007 (40-213)||(160216-160386)
[»] scaffold0494 (1 HSPs)
scaffold0494 (48-150)||(36-137)
[»] scaffold0247 (2 HSPs)
scaffold0247 (132-213)||(5965-6046)
scaffold0247 (96-213)||(17183-17300)
[»] scaffold0124 (1 HSPs)
scaffold0124 (122-213)||(23788-23879)
[»] scaffold0080 (1 HSPs)
scaffold0080 (132-213)||(44826-44907)
[»] scaffold0053 (1 HSPs)
scaffold0053 (62-168)||(60690-60796)
[»] scaffold0029 (1 HSPs)
scaffold0029 (77-213)||(12165-12300)
[»] scaffold0695 (1 HSPs)
scaffold0695 (62-150)||(6804-6893)
[»] scaffold0413 (1 HSPs)
scaffold0413 (48-152)||(13462-13566)
[»] scaffold0146 (1 HSPs)
scaffold0146 (40-150)||(22926-23038)
[»] scaffold0031 (1 HSPs)
scaffold0031 (40-179)||(56192-56331)
[»] scaffold0028 (5 HSPs)
scaffold0028 (40-179)||(137519-137658)
scaffold0028 (40-179)||(142457-142596)
scaffold0028 (40-179)||(144926-145065)
scaffold0028 (40-150)||(135050-135161)
scaffold0028 (40-150)||(139988-140099)
[»] scaffold0015 (1 HSPs)
scaffold0015 (101-150)||(209863-209912)
[»] scaffold1991 (1 HSPs)
scaffold1991 (132-213)||(522-603)
[»] scaffold1296 (1 HSPs)
scaffold1296 (62-150)||(2008-2096)
[»] scaffold0747 (1 HSPs)
scaffold0747 (62-150)||(1462-1550)
[»] scaffold0319 (1 HSPs)
scaffold0319 (62-213)||(6075-6225)
[»] scaffold0043 (1 HSPs)
scaffold0043 (62-150)||(10738-10826)
[»] scaffold0034 (1 HSPs)
scaffold0034 (96-213)||(33358-33474)


Alignment Details
Target: scaffold0044 (Bit Score: 120; Significance: 2e-61; HSPs: 2)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 18 - 153
Target Start/End: Complemental strand, 4804 - 4669
Alignment:
Q  18 agaataagtatctaaccccctaacttttaacctaattccccaatttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagactta 117  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||| |||||||||||||||||||||||    
T  4804 agaataagtatctaaccccctaacttttaacctaattccccaatttttcaaaaactaatcctagaacttgttaaagttaatcatcagaattatagactta 4705  T
Q  118 agaaaattggatgctagtcccacccttaccttagat 153  Q
    |||||||||||||||| |||||||||||||||||||    
T  4704 agaaaattggatgctaatcccacccttaccttagat 4669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 40 - 179
Target Start/End: Original strand, 41237 - 41376
Alignment:
Q  40 acttttaacctaattccccaatttctcaaaaactaat-cctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtccc 138  Q
    ||||||||||| | | ||||| ||||||||||| ||  |||||||| ||||||| | |||  ||||||| |  |||||||||  |||| ||| |||||||    
T  41237 acttttaaccttaattcccaaattctcaaaaacgaaaacctacaacatgttaaatccaattttcagaatcaatgacttaagattattgaatgttagtccc 41336  T
Q  139 acccttaccttagataatcaaaatcgcagcccttctaggtc 179  Q
    |||||||||||| |  || ||||||||||| || |||||||    
T  41337 acccttaccttata-gatgaaaatcgcagcactcctaggtc 41376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 93; Significance: 2e-45; HSPs: 56)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 62 - 213
Target Start/End: Original strand, 27845521 - 27845672
Alignment:
Q  62 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttaccttagataatcaaaa 161  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||| ||||| ||||||||||||| | |||| |||    
T  27845521 ttctcaaaaactaatcctacaacttgttaaatctaatcatcagaattatagacttaagaaaattgaatgttagtctcacccttacctta-acaatcgaaa 27845619  T
Q  162 tc-gcagcccttctaggtcctcttcccttttcttgacttttctcccttttctc 213  Q
    || ||||||  ||| ||| |||||| |||||||||||||||||||||||||||    
T  27845620 tcggcagcctctcttggttctcttctcttttcttgacttttctcccttttctc 27845672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 138 - 214
Target Start/End: Complemental strand, 21238323 - 21238247
Alignment:
Q  138 cacccttaccttagataatcaaaatcgcagcccttctaggtcctcttcccttttcttgacttttctcccttttctct 214  Q
    |||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21238323 cacccttaccttaggtaatcgaaatcgcagcccttctaggtcctcttcccttttcttgacttttctcccttttctct 21238247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 138 - 214
Target Start/End: Complemental strand, 21240873 - 21240797
Alignment:
Q  138 cacccttaccttagataatcaaaatcgcagcccttctaggtcctcttcccttttcttgacttttctcccttttctct 214  Q
    |||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21240873 cacccttaccttaggtaatcgaaatcgcagcccttctaggtcctcttcccttttcttgacttttctcccttttctct 21240797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 138 - 215
Target Start/End: Original strand, 31756822 - 31756899
Alignment:
Q  138 cacccttaccttagataatcaaaatcgcagcccttctaggtcctcttcccttttcttgacttttctcccttttctctg 215  Q
    |||||||||||||||||||| |||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||    
T  31756822 cacccttaccttagataatcgaaatcgcagcccttcttggttctcttcccttttcttgacttttctcccttttctctg 31756899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 138 - 215
Target Start/End: Complemental strand, 41683977 - 41683900
Alignment:
Q  138 cacccttaccttagataatcaaaatcgcagcccttctaggtcctcttcccttttcttgacttttctcccttttctctg 215  Q
    ||||||||||||||||||||||||||||||||||||| | | ||||||||||||||||||||||||||||||||||||    
T  41683977 cacccttaccttagataatcaaaatcgcagcccttcttgattctcttcccttttcttgacttttctcccttttctctg 41683900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 65 - 150
Target Start/End: Complemental strand, 18546228 - 18546143
Alignment:
Q  65 tcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctta 150  Q
    ||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||| | | ||||| |||||||||||||    
T  18546228 tcaaaaactaatcctacaacttgctaaatctaatcatcagaattatagacttaagaaaattgaacgttagtctcacccttacctta 18546143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 138 - 215
Target Start/End: Original strand, 44621832 - 44621909
Alignment:
Q  138 cacccttaccttagataatcaaaatcgcagcccttctaggtcctcttcccttttcttgacttttctcccttttctctg 215  Q
    |||||||||||||||||||| ||| |||||||||||| ||| ||||||||||||||||||||||||||||||||||||    
T  44621832 cacccttaccttagataatcgaaaacgcagcccttcttggttctcttcccttttcttgacttttctcccttttctctg 44621909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 47 - 213
Target Start/End: Original strand, 25109739 - 25109904
Alignment:
Q  47 acctaattccccaatttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttac 146  Q
    ||||||||| |||||| ||| ||||||||| ||||| |||||||||  ||||||||||||||| |||||||| | ||||| ||||||||| |||||||||    
T  25109739 acctaattctccaatt-ctctaaaactaattctaca-cttgttaaatttaatcatcagaattacagacttaatagaattgaatgctagtctcacccttac 25109836  T
Q  147 cttagataa-tcaaaatcgcagcc-cttctaggtcctcttcccttttcttgacttttctcccttttctc 213  Q
    |||| |||| |  ||||||||||| || ||  ||||||||| ||| |||||||||||||||||||||||    
T  25109837 ctta-ataatttgaaatcgcagcctctactttgtcctcttctcttctcttgacttttctcccttttctc 25109904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 43 - 213
Target Start/End: Original strand, 23005617 - 23005786
Alignment:
Q  43 tttaacctaattccccaatttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccaccc 142  Q
    ||||||||||||| | |||| ||| ||||||||||||||| ||| |||||  ||||||||| ||||| |||||||| | ||||| ||||||||| |||||    
T  23005617 tttaacctaattctcaaatt-ctctaaaactaatcctaca-cttcttaaatttaatcatcaaaattacagacttaatagaattgaatgctagtctcaccc 23005714  T
Q  143 ttaccttagataatcaaaatcgcagcc-cttctaggtcctcttcccttttcttgacttttctcccttttctc 213  Q
    |||||||||| |||| ||||||||||| ||| | ||| ||  || ||| ||||||||||||| |||||||||    
T  23005715 ttaccttagaaaatcgaaatcgcagcctcttgttggttcttctctcttctcttgacttttctgccttttctc 23005786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 68 - 213
Target Start/End: Original strand, 26393292 - 26393436
Alignment:
Q  68 aaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttaccttagataatcaaaatcgcag 167  Q
    |||||||| ||||||||||||||||  ||||||||||||||| |||||||||| ||||| ||| ||||| |||||||||||||   |||| |||||||||    
T  26393292 aaaactaaacctacaacttgttaaatttaatcatcagaattacagacttaagagaattgaatgttagtctcacccttaccttaacaaatcgaaatcgcag 26393391  T
Q  168 ccct-tctaggtcctcttcccttttcttgacttttctcccttttctc 213  Q
    |  | |||||||  |  |||||| |||| ||||||||||||||||||    
T  26393392 ctttctctaggt--ttctcccttctcttaacttttctcccttttctc 26393436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 138 - 215
Target Start/End: Complemental strand, 12627127 - 12627050
Alignment:
Q  138 cacccttaccttagataatcaaaatcgcagcccttctaggtcctcttcccttttcttgacttttctcccttttctctg 215  Q
    |||||||||||||| ||||| || ||| ||||| ||| ||||||||||||||||||||||||||||||||||||||||    
T  12627127 cacccttaccttagttaatcgaagtcgtagcccctcttggtcctcttcccttttcttgacttttctcccttttctctg 12627050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 138 - 215
Target Start/End: Original strand, 24505604 - 24505681
Alignment:
Q  138 cacccttaccttagataatcaaaatcgcagcccttctaggtcctcttcccttttcttgacttttctcccttttctctg 215  Q
    |||||||||||||||||||| |||||||||||||||| ||| ||||||||||||||||||| |||||  |||||||||    
T  24505604 cacccttaccttagataatcgaaatcgcagcccttcttggttctcttcccttttcttgactcttctcttttttctctg 24505681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 62 - 150
Target Start/End: Complemental strand, 39827283 - 39827195
Alignment:
Q  62 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctta 150  Q
    |||||||||||||| |||||||| ||||||| |||||||||||||| |||| |||||||| |||| ||  |||||||||||||||||||    
T  39827283 ttctcaaaaactaaccctacaacatgttaaatctaatcatcagaatcataggcttaagaagattgaatcttagtcccacccttacctta 39827195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 62 - 210
Target Start/End: Complemental strand, 43946606 - 43946460
Alignment:
Q  62 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctta-gataatcaaa 160  Q
    ||||| ||||||||||||||||| ||||||| ||||| |||||||| |||| ||||||||||||| ||| | |||  |||||||||||| |||  |||||    
T  43946606 ttctccaaaactaatcctacaacatgttaaatctaattatcagaatcataggcttaagaaaattgaatgtttgtcttacccttaccttatgat--tcaaa 43946509  T
Q  161 atc-gcagcccttctaggtcctcttcccttttcttgacttttctccctttt 210  Q
    ||| ||||||  ||| |||  ||||||||| ||||||||||||||||||||    
T  43946508 atcggcagcctctcttggt--tcttcccttctcttgacttttctccctttt 43946460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 62 - 149
Target Start/End: Original strand, 34137828 - 34137915
Alignment:
Q  62 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctt 149  Q
    |||||||||||||| |||||||| ||||||| |||||||||||||| |||| |||||||| |||| ||| |||| |||||||||||||    
T  34137828 ttctcaaaaactaaccctacaacatgttaaatctaatcatcagaatcataggcttaagaagattgaatgttagttccacccttacctt 34137915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 138 - 204
Target Start/End: Original strand, 31504501 - 31504567
Alignment:
Q  138 cacccttaccttagataatcaaaatcgcagcccttctaggtcctcttcccttttcttgacttttctc 204  Q
    |||||||||||||||||||| |||||||||||||||| ||| ||||||||||||||||||| |||||    
T  31504501 cacccttaccttagataatcgaaatcgcagcccttcttggttctcttcccttttcttgactcttctc 31504567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 138 - 204
Target Start/End: Original strand, 31507067 - 31507133
Alignment:
Q  138 cacccttaccttagataatcaaaatcgcagcccttctaggtcctcttcccttttcttgacttttctc 204  Q
    |||||||||||||||||||| |||||||||||||||| ||| ||||||||||||||||||| |||||    
T  31507067 cacccttaccttagataatcgaaatcgcagcccttcttggttctcttcccttttcttgactcttctc 31507133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 95 - 213
Target Start/End: Complemental strand, 22458745 - 22458624
Alignment:
Q  95 taatcatcagaattatagacttaagaaaattggatgctagtcccacccttaccttag-ataatcaaaatcgcag--cccttctaggtcctcttccctttt 191  Q
    ||||||||||||||| |||||||| ||||||| ||||||||| |||||||||||||| | |||| |||||||||  | |||  |||| ||| || ||| |    
T  22458745 taatcatcagaattacagacttaataaaattgaatgctagtctcacccttaccttagcaaaatcgaaatcgcagctctcttgaaggttctcctctcttct 22458646  T
Q  192 cttgacttttctcccttttctc 213  Q
    |||||||||||| |||||||||    
T  22458645 cttgacttttcttccttttctc 22458624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 83 - 152
Target Start/End: Original strand, 19672753 - 19672822
Alignment:
Q  83 acttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttaccttaga 152  Q
    ||||||||||  ||||||||||||||| |||||||| | ||||| ||||||||| |||||||||||||||    
T  19672753 acttgttaaatttaatcatcagaattacagacttaatagaattgaatgctagtctcacccttaccttaga 19672822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 62 - 150
Target Start/End: Original strand, 24682190 - 24682278
Alignment:
Q  62 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctta 150  Q
    |||||||||||||| |||||||| |||||||   |||  ||||||| ||||||||||||  |||| ||| |||||||||||||||||||    
T  24682190 ttctcaaaaactaaacctacaacatgttaaatacaattttcagaatcatagacttaagattattgaatgttagtcccacccttacctta 24682278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 83 - 213
Target Start/End: Original strand, 23792179 - 23792310
Alignment:
Q  83 acttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttaccttagataatcaaaatcgcagcc-cttctaggtcct 181  Q
    ||||||||||  ||||||||||||||| |||||||| || |||| ||||||| | |||||||||||||   | || |||| |||||| ||| | ||| ||    
T  23792179 acttgttaaatttaatcatcagaattacagacttaataagattgaatgctaggctcacccttaccttaagaattcgaaattgcagcctcttgttggttct 23792278  T
Q  182 cttcccttttcttgacttttctcccttttctc 213  Q
      || ||| |||||||||||||||||||||||    
T  23792279 tctctcttctcttgacttttctcccttttctc 23792310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 62 - 168
Target Start/End: Original strand, 6726801 - 6726907
Alignment:
Q  62 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttaccttagataatcaaaa 161  Q
    |||||||||||||| |||||||| |||||||   |||  ||||||| ||||||| ||||  |||| ||| |||||||||||||||||| ||  || ||||    
T  6726801 ttctcaaaaactaaacctacaacatgttaaatacaattttcagaatcatagactcaagattattgaatgttagtcccacccttaccttggaatataaaaa 6726900  T
Q  162 tcgcagc 168  Q
    |||||||    
T  6726901 tcgcagc 6726907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 62 - 152
Target Start/End: Original strand, 22106219 - 22106309
Alignment:
Q  62 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttaccttaga 152  Q
    |||||||||||||| |||||||| |||||||   |||  ||||||| ||||||| ||||  |||| ||| |||||||||||||||||||||    
T  22106219 ttctcaaaaactaaacctacaacatgttaaatacaattttcagaatcatagactcaagattattgaatgttagtcccacccttaccttaga 22106309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 84 - 213
Target Start/End: Original strand, 24941586 - 24941714
Alignment:
Q  84 cttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttaccttagataatcaaaatcgcagcccttctaggtcctct 183  Q
    |||||||||  ||||||||||||||| |||||||| || |||| ||| | ||| ||||||||||||| |  ||  |||||||||||| |||||||| ||     
T  24941586 cttgttaaatttaatcatcagaattacagacttaataagattgaatgtttgtctcacccttaccttataagat-gaaatcgcagcccctctaggtcttc- 24941683  T
Q  184 tcccttttcttgac-ttttctcccttttctc 213  Q
    |||||| ||||| | ||||||||||||||||    
T  24941684 tcccttctcttggctttttctcccttttctc 24941714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 69 - 150
Target Start/End: Original strand, 7187395 - 7187476
Alignment:
Q  69 aaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctta 150  Q
    ||||||| ||| |||| ||||||| ||||| |||||||| |||| |||||||| |||| ||| ||||| |||||||||||||    
T  7187395 aaactaaacctccaacatgttaaatctaattatcagaatcataggcttaagaagattgaatgttagtctcacccttacctta 7187476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 94 - 150
Target Start/End: Complemental strand, 23079930 - 23079874
Alignment:
Q  94 ctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctta 150  Q
    |||||||||||||| || | ||||||||||||| ||| |||||||||||||||||||    
T  23079930 ctaatcatcagaatcatcggcttaagaaaattgaatgttagtcccacccttacctta 23079874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 62 - 150
Target Start/End: Original strand, 23932214 - 23932302
Alignment:
Q  62 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctta 150  Q
    |||||||||||||| |||||||| |||||||   |||  ||||||| ||||||| ||||  |||| ||| |||||||||||||||||||    
T  23932214 ttctcaaaaactaaacctacaacatgttaaatacaattttcagaatcatagactcaagattattgaatgttagtcccacccttacctta 23932302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 62 - 150
Target Start/End: Complemental strand, 32214338 - 32214250
Alignment:
Q  62 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctta 150  Q
    |||||||||||||| |||||||| |||||||   |||  ||||||| ||||||| ||||  |||| ||| |||||||||||||||||||    
T  32214338 ttctcaaaaactaaacctacaacatgttaaatacaattttcagaatcatagactcaagattattgaatgttagtcccacccttacctta 32214250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 69 - 168
Target Start/End: Complemental strand, 22173060 - 22172962
Alignment:
Q  69 aaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttaccttagataatcaaaatcgcagc 168  Q
    ||||||| ||| |||| ||||||| ||||| |||| ||| |||| |||||||| |||| ||| ||||| ||||||||||||| | ||| |||||||||||    
T  22173060 aaactaaacctccaacatgttaaatctaattatcataatcataggcttaagaagattgaatgttagtctcacccttacctta-acaatgaaaatcgcagc 22172962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 62 - 153
Target Start/End: Original strand, 24918894 - 24918985
Alignment:
Q  62 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttaccttagat 153  Q
    |||||||||||||| |||||||| || ||||   |||  ||||||| ||||||| ||||  |||| ||| ||||||||||||||||||||||    
T  24918894 ttctcaaaaactaaacctacaacatggtaaatagaattttcagaatcatagactcaagattattgaatgttagtcccacccttaccttagat 24918985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 57 - 213
Target Start/End: Complemental strand, 34401830 - 34401674
Alignment:
Q  57 ccaatttctcaaaaactaat-cctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttaccttagataa 155  Q
    |||| ||||||||||||||  |||||||| ||||||| | |||  ||||||| |  |||||||||  |||| ||| |||||||||||||||||||||  |    
T  34401830 ccaaattctcaaaaactaaaacctacaacatgttaaatccaattttcagaatcaatgacttaagattattgaatgttagtcccacccttaccttagaata 34401731  T
Q  156 tcaaaatcgcagcccttctaggtcctcttcccttttcttgac-ttttctcccttttctc 213  Q
      ||||||||||||  |||| || ||  |||||| ||||| | ||||||||||||||||    
T  34401730 agaaaatcgcagcc--tctatgtgcttctcccttctcttggctttttctcccttttctc 34401674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 40 - 179
Target Start/End: Original strand, 18809780 - 18809919
Alignment:
Q  40 acttttaacc-taattccccaatttctcaaaaactaat-cctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcc 137  Q
    |||||||||| |||||||| |||| ||||||||||||  |||||||| ||||||| | |||  ||||||| |  |||||||||  |||| ||| ||||||    
T  18809780 acttttaaccctaattcccaaatt-ctcaaaaactaaaacctacaacatgttaaatccaattttcagaatcaatgacttaagattattgaatgttagtcc 18809878  T
Q  138 cacccttaccttagataatcaaaatcgcagcccttctaggtc 179  Q
    ||||||||||||| |  || ||||||||||| || |||||||    
T  18809879 cacccttaccttata-gatgaaaatcgcagcactcctaggtc 18809919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 40 - 179
Target Start/End: Complemental strand, 23711338 - 23711199
Alignment:
Q  40 acttttaacc-taattccccaatttctcaaaaactaat-cctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcc 137  Q
    |||||||||| |||||||| |||| ||||||||||||  |||||||| ||||||| | |||  ||||||| |  |||||||||  |||| ||| ||||||    
T  23711338 acttttaaccctaattcccaaatt-ctcaaaaactaaaacctacaacatgttaaatccaattttcagaatcaatgacttaagattattgaatgttagtcc 23711240  T
Q  138 cacccttaccttagataatcaaaatcgcagcccttctaggtc 179  Q
    ||||||||||||| |  || ||||||||||| || |||||||    
T  23711239 cacccttaccttata-gatgaaaatcgcagcactcctaggtc 23711199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 145 - 213
Target Start/End: Complemental strand, 24688459 - 24688390
Alignment:
Q  145 accttagataatcaaaatcgcagcc-cttctaggtcctcttcccttttcttgacttttctcccttttctc 213  Q
    |||||||| |||| |||| |||||| ||||||||| ||| || ||| |||||||||||||||||||||||    
T  24688459 accttagaaaatcgaaattgcagcctcttctaggttctcctctcttctcttgacttttctcccttttctc 24688390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 40 - 179
Target Start/End: Complemental strand, 32038822 - 32038683
Alignment:
Q  40 acttttaacc-taattccccaatttctcaaaaactaat-cctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcc 137  Q
    |||||||||| |||||||| |||| ||||||||||||  |||||||| ||||||| | |||  ||||||| |  |||||||||  |||| ||| ||||||    
T  32038822 acttttaaccctaattcccaaatt-ctcaaaaactaaaacctacaacatgttaaatccaattttcagaatcaatgacttaagattattgaatgttagtcc 32038724  T
Q  138 cacccttaccttagataatcaaaatcgcagcccttctaggtc 179  Q
    ||||||||||||| |  || ||||||||||| || |||||||    
T  32038723 cacccttaccttata-gatgaaaatcgcagcactcctaggtc 32038683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 84 - 169
Target Start/End: Original strand, 43138262 - 43138347
Alignment:
Q  84 cttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttaccttagataatcaaaatcgcagcc 169  Q
    |||||||||  ||||||||||||||| |||| ||| || |||| ||| ||||| |||||||||||||||  |  ||||||||||||    
T  43138262 cttgttaaatttaatcatcagaattacagacctaataagattgaatgttagtctcacccttaccttagaataagaaaatcgcagcc 43138347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 56 - 151
Target Start/End: Original strand, 22695188 - 22695284
Alignment:
Q  56 cccaatttctcaaaaactaat-cctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttaccttag 151  Q
    ||||| ||||||||||||||  |||||||| ||||||| | |||  ||||||| |  |||||||||  |||| ||| ||||||||||||||||||||    
T  22695188 cccaaattctcaaaaactaaaacctacaacatgttaaatcaaattttcagaatcaatgacttaagattattgaatgttagtcccacccttaccttag 22695284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 62 - 150
Target Start/End: Complemental strand, 45027308 - 45027220
Alignment:
Q  62 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctta 150  Q
    |||||||||||||| |||||||| |||||||   |||  ||||||| ||||||| ||||  |||| ||| ||||| |||||||||||||    
T  45027308 ttctcaaaaactaaacctacaacatgttaaatacaattttcagaatcatagactcaagattattgaatgttagtctcacccttacctta 45027220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 57 - 179
Target Start/End: Original strand, 23131716 - 23131838
Alignment:
Q  57 ccaatttctcaaaaactaat-cctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttaccttagataa 155  Q
    |||| ||||||||||||||  |||||||| ||||||| | |||  ||||||| |  |||||||||  |||| ||| ||||||||||||||||||| |  |    
T  23131716 ccaaattctcaaaaactaaaacctacaacatgttaaatccaattttcagaatcaatgacttaagattattgaatgttagtcccacccttaccttata-ga 23131814  T
Q  156 tcaaaatcgcagcccttctaggtc 179  Q
    | ||||||||||| || |||||||    
T  23131815 tgaaaatcgcagcactcctaggtc 23131838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 57 - 179
Target Start/End: Original strand, 23134183 - 23134305
Alignment:
Q  57 ccaatttctcaaaaactaat-cctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttaccttagataa 155  Q
    |||| ||||||||||||||  |||||||| ||||||| | |||  ||||||| |  |||||||||  |||| ||| ||||||||||||||||||| |  |    
T  23134183 ccaaattctcaaaaactaaaacctacaacatgttaaatccaattttcagaatcaatgacttaagattattgaatgttagtcccacccttaccttata-ga 23134281  T
Q  156 tcaaaatcgcagcccttctaggtc 179  Q
    | ||||||||||| || |||||||    
T  23134282 tgaaaatcgcagcactcctaggtc 23134305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 40 - 169
Target Start/End: Complemental strand, 24900003 - 24899873
Alignment:
Q  40 acttttaacc-taattccccaatttctcaaaaactaat-cctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcc 137  Q
    |||||||||| |||||||| |||| ||||||||||||  |||||||| |||||||   |||  ||||||| ||||||| ||||  |||| ||| ||||||    
T  24900003 acttttaaccctaattcccaaatt-ctcaaaaactaaaacctacaacatgttaaatacaattttcagaatcatagactcaagattattgaatgttagtcc 24899905  T
Q  138 cacccttaccttagataatcaaaatcgcagcc 169  Q
    ||||||||||| |||  |  ||||||||||||    
T  24899904 cacccttacctcagaataagaaaatcgcagcc 24899873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 40 - 169
Target Start/End: Complemental strand, 24902480 - 24902350
Alignment:
Q  40 acttttaacc-taattccccaatttctcaaaaactaat-cctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcc 137  Q
    |||||||||| |||||||| |||| ||||||||||||  |||||||| |||||||   |||  ||||||| ||||||| ||||  |||| ||| ||||||    
T  24902480 acttttaaccctaattcccaaatt-ctcaaaaactaaaacctacaacatgttaaatacaattttcagaatcatagactcaagattattgaatgttagtcc 24902382  T
Q  138 cacccttaccttagataatcaaaatcgcagcc 169  Q
    ||||||||||| |||  |  ||||||||||||    
T  24902381 cacccttacctcagaataagaaaatcgcagcc 24902350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 40 - 169
Target Start/End: Complemental strand, 24904957 - 24904827
Alignment:
Q  40 acttttaacc-taattccccaatttctcaaaaactaat-cctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcc 137  Q
    |||||||||| |||||||| |||| ||||||||||||  |||||||| |||||||   |||  ||||||| ||||||| ||||  |||| ||| ||||||    
T  24904957 acttttaaccctaattcccaaatt-ctcaaaaactaaaacctacaacatgttaaatacaattttcagaatcatagactcaagattattgaatgttagtcc 24904859  T
Q  138 cacccttaccttagataatcaaaatcgcagcc 169  Q
    ||||||||||| |||  |  ||||||||||||    
T  24904858 cacccttacctcagaataagaaaatcgcagcc 24904827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 40 - 169
Target Start/End: Complemental strand, 24907432 - 24907302
Alignment:
Q  40 acttttaacc-taattccccaatttctcaaaaactaat-cctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcc 137  Q
    |||||||||| |||||||| |||| ||||||||||||  |||||||| |||||||   |||  ||||||| ||||||| ||||  |||| ||| ||||||    
T  24907432 acttttaaccctaattcccaaatt-ctcaaaaactaaaacctacaacatgttaaatacaattttcagaatcatagactcaagattattgaatgttagtcc 24907334  T
Q  138 cacccttaccttagataatcaaaatcgcagcc 169  Q
    ||||||||||| |||  |  ||||||||||||    
T  24907333 cacccttacctcagaataagaaaatcgcagcc 24907302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 109 - 179
Target Start/End: Original strand, 20309971 - 20310041
Alignment:
Q  109 atagacttaagaaaattggatgctagtcccacccttaccttagataatcaaaatcgcagcccttctaggtc 179  Q
    |||||||||| || |||| | | ||||||||||||||||||| || || ||||||||||||| | ||||||    
T  20309971 atagacttaataagattgcaagttagtcccacccttaccttatatgatgaaaatcgcagcccctttaggtc 20310041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 132 - 210
Target Start/End: Complemental strand, 22730454 - 22730377
Alignment:
Q  132 tagtcccacccttaccttagataatcaaaatcgcagcccttctaggtcctcttcccttttcttgacttttctccctttt 210  Q
    ||||| ||||||||||||| | | ||||||||||||||||||| |||  |  |||||| ||||| ||||||||||||||    
T  22730454 tagtctcacccttaccttataga-tcaaaatcgcagcccttcttggtggttctcccttctcttggcttttctccctttt 22730377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 40 - 148
Target Start/End: Complemental strand, 24897520 - 24897411
Alignment:
Q  40 acttttaacc-taattccccaatttctcaaaaactaat-cctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcc 137  Q
    |||||||||| |||||||| |||| ||||||||||||  |||||||| |||||||   |||  ||||||| ||||||| ||||  |||| ||| ||||||    
T  24897520 acttttaaccctaattcccaaatt-ctcaaaaactaaaacctacaacatgttaaatacaattttcagaatcatagactcaagattattgaatgttagtcc 24897422  T
Q  138 cacccttacct 148  Q
    |||||||||||    
T  24897421 cacccttacct 24897411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 132 - 213
Target Start/End: Complemental strand, 12900589 - 12900506
Alignment:
Q  132 tagtcccacccttaccttagataatcaaaatcgcagccct--tctaggtcctcttcc-cttttcttgacttttctcccttttctc 213  Q
    ||||| ||||||||||||| |||  |||||||||||||||  |||||||| ||| || ||| ||||| |||||||||||||||||    
T  12900589 tagtctcacccttacctta-atacacaaaatcgcagccctcctctaggtcttctccctcttctcttggcttttctcccttttctc 12900506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 99 - 195
Target Start/End: Complemental strand, 20519373 - 20519277
Alignment:
Q  99 catcagaattataga-cttaagaaaattggatgctagtcccacccttaccttagataatcaaaatcgcagcccttctaggtcctcttcccttttcttg 195  Q
    ||||||||||||| | ||||| | ||||| ||||||||| ||||||||||||||| |||  ||||| |||||  |||||||| ||||| ||| |||||    
T  20519373 catcagaattatacaacttaatagaattgaatgctagtctcacccttaccttaga-aattgaaatcacagcctctctaggtcttcttctcttctcttg 20519277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 65 - 150
Target Start/End: Complemental strand, 23706431 - 23706346
Alignment:
Q  65 tcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctta 150  Q
    ||||||||||| | |||||| |||||||   |||  ||||||| ||||||| ||||  |||| ||| |||||||||||||||||||    
T  23706431 tcaaaaactaaacatacaacatgttaaatacaattttcagaatcatagactcaagattattgaatgttagtcccacccttacctta 23706346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 40 - 179
Target Start/End: Original strand, 26506216 - 26506355
Alignment:
Q  40 acttttaacc-taattccccaatttctcaaaaactaat-cctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcc 137  Q
    |||||||||| |||||||| |||| ||||||||||||  |||||||| ||||||| | |||   ||||||||  |||||||||  |||| ||| |||||     
T  26506216 acttttaaccctaattcccaaatt-ctcaaaaactaaaacctacaacatgttaaatccaatttccagaattaatgacttaagattattgaatgttagtct 26506314  T
Q  138 cacccttaccttagataatcaaaatcgcagcccttctaggtc 179  Q
    ||||||||||||| |  || ||||||||||| || |||||||    
T  26506315 cacccttaccttata-gatgaaaatcgcagcactcctaggtc 26506355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 40 - 179
Target Start/End: Complemental strand, 27920089 - 27919950
Alignment:
Q  40 acttttaacc-taattccccaatttctcaaaaactaat-cctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcc 137  Q
    |||||||||| |||||||| |||| ||||||||||||  |||||||| ||||||| | |||   ||||||||  |||||||||  |||| ||| |||||     
T  27920089 acttttaaccctaattcccaaatt-ctcaaaaactaaaacctacaacatgttaaatccaatttccagaattaatgacttaagattattgaatgttagtct 27919991  T
Q  138 cacccttaccttagataatcaaaatcgcagcccttctaggtc 179  Q
    ||||||||||||| |  || ||||||||||| || |||||||    
T  27919990 cacccttaccttata-gatgaaaatcgcagcactcctaggtc 27919950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 40 - 213
Target Start/End: Original strand, 28577942 - 28578114
Alignment:
Q  40 acttttaacc-taattccccaatttctcaaaaactaat-cctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcc 137  Q
    |||||||||| |||||||| |||| ||||||||||||  |||||||| ||||||| | |||  ||||||| |  |||||||||  |||| ||| ||||||    
T  28577942 acttttaaccctaattcccaaatt-ctcaaaaactaaaacctacaacatgttaaatccaattttcagaatcaatgacttaagattattgaatgttagtcc 28578040  T
Q  138 cacccttaccttagataatcaaaatcgcagcccttctaggtcctcttcccttttcttgact-tttctcccttttctc 213  Q
     |||||||||||  |||| ||||||||| | | ||||||||| |  |||||| ||||| || ||||| |||||||||    
T  28578041 tacccttacctt--ataaccaaaatcgccg-ctttctaggtctttctcccttctcttggctatttcttccttttctc 28578114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 40 - 179
Target Start/End: Original strand, 39683153 - 39683292
Alignment:
Q  40 acttttaacc-taattccccaatttctcaaaaactaat-cctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcc 137  Q
    |||||||||| |||||||| |||| ||||||||||||  |||||||| |||||||   |||  ||||||| |  |||||||||  |||| ||| ||||||    
T  39683153 acttttaaccctaattcccaaatt-ctcaaaaactaaaacctacaacatgttaaattcaattttcagaatcaatgacttaagattattgaatgttagtcc 39683251  T
Q  138 cacccttaccttagataatcaaaatcgcagcccttctaggtc 179  Q
    ||||||||||||| |  || ||||||||||| || |||||||    
T  39683252 cacccttaccttata-gatgaaaatcgcagcactcctaggtc 39683292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 109 - 169
Target Start/End: Original strand, 31346130 - 31346190
Alignment:
Q  109 atagacttaagaaaattggatgctagtcccacccttaccttagataatcaaaatcgcagcc 169  Q
    |||| |||||||| |||| ||| ||||| ||||||||||||| | ||| ||||||||||||    
T  31346130 ataggcttaagaagattgaatgttagtctcacccttaccttaaagaatgaaaatcgcagcc 31346190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 101 - 153
Target Start/End: Original strand, 37380508 - 37380560
Alignment:
Q  101 tcagaattatagacttaagaaaattggatgctagtcccacccttaccttagat 153  Q
    ||||||||||||||||||||  | || ||| ||||| ||||||||||||||||    
T  37380508 tcagaattatagacttaagatcactgaatgatagtctcacccttaccttagat 37380560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0422 (Bit Score: 77; Significance: 7e-36; HSPs: 1)
Name: scaffold0422
Description:

Target: scaffold0422; HSP #1
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 123 - 215
Target Start/End: Original strand, 3985 - 4077
Alignment:
Q  123 attggatgctagtcccacccttaccttagataatcaaaatcgcagcccttctaggtcctcttcccttttcttgacttttctcccttttctctg 215  Q
    |||| ||| ||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3985 attgaatgttagtctcacccttaccttagataatcgaaatcgcagcccttctaggtcctcttcccttttcttgacttttctcccttttctctg 4077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 75; Significance: 1e-34; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 43 - 213
Target Start/End: Original strand, 25945 - 26113
Alignment:
Q  43 tttaacctaattccccaatttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccaccc 142  Q
    ||||||||||||| | |||| ||| ||||| ||||||||| |||||||||  ||||||||||||||| || ||||| || |||| ||||||||| |||||    
T  25945 tttaacctaattctcaaatt-ctctaaaaccaatcctaca-cttgttaaatttaatcatcagaattacaggcttaataagattgaatgctagtctcaccc 26042  T
Q  143 ttaccttagataatcaaaatcgcagcccttctaggtcctcttcccttttcttgacttttctcccttttctc 213  Q
    |||||||||| |||| |||||||||||  ||| |||||||||  ||| |||||||||||||||||||||||    
T  26043 ttaccttagaaaatcgaaatcgcagcctctcttggtcctcttatcttctcttgacttttctcccttttctc 26113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 74; Significance: 4e-34; HSPs: 67)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 44 - 213
Target Start/End: Original strand, 24353912 - 24354079
Alignment:
Q  44 ttaacctaattccccaatttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccaccct 143  Q
    |||||||||||| | |||| ||| |||||||| | |||| |||||||||  ||||||||||||||| |||||||| || |||| ||||||||| ||||||    
T  24353912 ttaacctaattctcaaatt-ctctaaaactaaccataca-cttgttaaatttaatcatcagaattacagacttaataagattgaatgctagtctcaccct 24354009  T
Q  144 taccttagataatcaaaatcgcagcccttctaggtcctcttcccttttcttgacttttctcccttttctc 213  Q
    ||||||||| |||||||||||||| |  ||| |||||||||| ||| |||||||||||| ||||||||||    
T  24354010 taccttagaaaatcaaaatcgcagtctctctcggtcctcttctcttctcttgacttttcccccttttctc 24354079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 138 - 215
Target Start/End: Complemental strand, 21414443 - 21414366
Alignment:
Q  138 cacccttaccttagataatcaaaatcgcagcccttctaggtcctcttcccttttcttgacttttctcccttttctctg 215  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  21414443 cacccttaccttagataatcgaaatcgcagcccttctaggtcctcttcccttttcttgacttttcttccttttctctg 21414366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 138 - 215
Target Start/End: Complemental strand, 24707024 - 24706947
Alignment:
Q  138 cacccttaccttagataatcaaaatcgcagcccttctaggtcctcttcccttttcttgacttttctcccttttctctg 215  Q
    |||||||||||||||||||| |||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||    
T  24707024 cacccttaccttagataatcgaaatcgcagcccttcttggttctcttcccttttcttgacttttctcccttttctctg 24706947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 40 - 213
Target Start/End: Original strand, 16800303 - 16800473
Alignment:
Q  40 acttttaacctaattccccaatttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattat-agacttaagaaaattggatgctagtccc 138  Q
    |||||||||||||||||| |  |||||||||  ||  |||||||||||||||| |||||||| |||||||| || ||||||||||||| ||| ||||| |    
T  16800303 acttttaacctaattcccaa--ttctcaaaat-tatacctacaacttgttaaatctaatcattagaattataaggcttaagaaaattgaatgatagtctc 16800399  T
Q  139 acccttaccttagataatcaaaatcg-cagcccttctaggtcctcttcccttttcttgacttttctcccttttctc 213  Q
    |||||||||||  ||||||||||||| |||||  | | ||| |||||| ||| |||||||||||||||||||||||    
T  16800400 acccttacctt--ataatcaaaatcgccagcctcttttggttctcttctcttctcttgacttttctcccttttctc 16800473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 138 - 215
Target Start/End: Complemental strand, 22144601 - 22144524
Alignment:
Q  138 cacccttaccttagataatcaaaatcgcagcccttctaggtcctcttcccttttcttgacttttctcccttttctctg 215  Q
    |||||||||||||||||||| |||||||||||||||| ||| ||||||||||||||||||||||||||||||| ||||    
T  22144601 cacccttaccttagataatcgaaatcgcagcccttcttggttctcttcccttttcttgacttttctcccttttttctg 22144524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 138 - 215
Target Start/End: Original strand, 44432972 - 44433049
Alignment:
Q  138 cacccttaccttagataatcaaaatcgcagcccttctaggtcctcttcccttttcttgacttttctcccttttctctg 215  Q
    ||||||||||||||||| || ||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||    
T  44432972 cacccttaccttagatattcgaaatcgcagaccttctaggtcctcttcccttttcttgactcttctcccttttctctg 44433049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 40 - 168
Target Start/End: Original strand, 22526353 - 22526478
Alignment:
Q  40 acttttaacctaattccccaatttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattat-agacttaagaaaattggatgctagtccc 138  Q
    |||||||||||||||||| |  ||||||||| |||| |||||||||||||||| |||||||||| |||||| || ||||||||||||| ||| ||||| |    
T  22526353 acttttaacctaattcccaa--ttctcaaaa-ctaaacctacaacttgttaaatctaatcatcaaaattataaggcttaagaaaattgaatgttagtctc 22526449  T
Q  139 acccttaccttagataatcaaaatcgcagc 168  Q
    |||||||||||| | |||||||||||||||    
T  22526450 acccttaccttata-aatcaaaatcgcagc 22526478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 138 - 215
Target Start/End: Complemental strand, 7300279 - 7300202
Alignment:
Q  138 cacccttaccttagataatcaaaatcgcagcccttctaggtcctcttcccttttcttgacttttctcccttttctctg 215  Q
    |||||||||||||||||||| |||||||||||||||| ||| ||||||||||||||||||| |||||| |||||||||    
T  7300279 cacccttaccttagataatcgaaatcgcagcccttcttggttctcttcccttttcttgactcttctcctttttctctg 7300202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 138 - 215
Target Start/End: Complemental strand, 10834120 - 10834043
Alignment:
Q  138 cacccttaccttagataatcaaaatcgcagcccttctaggtcctcttcccttttcttgacttttctcccttttctctg 215  Q
    |||||||||||||| ||||| || ||||||||| ||| ||||||||||||||||||||||||||||||||||||||||    
T  10834120 cacccttaccttagttaatcgaagtcgcagcccctcttggtcctcttcccttttcttgacttttctcccttttctctg 10834043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 138 - 215
Target Start/End: Original strand, 17615821 - 17615898
Alignment:
Q  138 cacccttaccttagataatcaaaatcgcagcccttctaggtcctcttcccttttcttgacttttctcccttttctctg 215  Q
    |||||||||||||||||||| |||||||||||||||| ||| ||||||||||||||||||| |||||| |||||||||    
T  17615821 cacccttaccttagataatcgaaatcgcagcccttcttggttctcttcccttttcttgactcttctcctttttctctg 17615898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 62 - 210
Target Start/End: Original strand, 28398452 - 28398598
Alignment:
Q  62 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctta-gataatcaaa 160  Q
    ||||| ||||||||||||||||| ||||||  |||||||||||||| |||| ||||||||||||| ||| ||||| ||||||||||||| |||  |||||    
T  28398452 ttctccaaaactaatcctacaacatgttaattctaatcatcagaatcataggcttaagaaaattgaatgttagtctcacccttaccttatgat--tcaaa 28398549  T
Q  161 atc-gcagcccttctaggtcctcttcccttttcttgacttttctccctttt 210  Q
    ||| ||| ||  ||| |||  ||||||||| ||||||||||||||||||||    
T  28398550 atcggcaacctctcttggt--tcttcccttctcttgacttttctccctttt 28398598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 62 - 168
Target Start/End: Complemental strand, 19936326 - 19936223
Alignment:
Q  62 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttaccttagataatcaaaa 161  Q
    |||||||||||||| |||||||| |||||||  ||||||||||||||| |||||||| | ||||| ||||||||| ||||||||||||| ||||| ||||    
T  19936326 ttctcaaaaactaaacctacaacatgttaaa--taatcatcagaattacagacttaatagaattgaatgctagtctcacccttacctta-ataataaaaa 19936230  T
Q  162 tcgcagc 168  Q
    |||||||    
T  19936229 tcgcagc 19936223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 62 - 157
Target Start/End: Complemental strand, 22245325 - 22245230
Alignment:
Q  62 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttaccttagataatc 157  Q
    |||||||||||||| |||||||| ||||||| ||||| |||||||| |||| |||||||| |||| ||| ||||||||||||||||||||| ||||    
T  22245325 ttctcaaaaactaaacctacaacatgttaaatctaattatcagaatcataggcttaagaagattgaatgttagtcccacccttaccttagaaaatc 22245230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 62 - 157
Target Start/End: Complemental strand, 22252403 - 22252308
Alignment:
Q  62 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttaccttagataatc 157  Q
    |||||||||||||| |||||||| ||||||| ||||| |||||||| |||| |||||||| |||| ||| ||||||||||||||||||||| ||||    
T  22252403 ttctcaaaaactaaacctacaacatgttaaatctaattatcagaatcataggcttaagaagattgaatgttagtcccacccttaccttagaaaatc 22252308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 43 - 213
Target Start/End: Complemental strand, 17438770 - 17438602
Alignment:
Q  43 tttaacctaattccccaatttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccaccc 142  Q
    ||||||||||||| | |||| |||| ||||||||||||||||||||||||    | ||||||||| |||||||||| | ||||| ||||||||| || ||    
T  17438770 tttaacctaattctcaaatt-ctcacaaactaatcctacaacttgttaaatacgaccatcagaatcatagacttaatagaattgaatgctagtctcaacc 17438672  T
Q  143 ttaccttagataatcaaaatcgcagcccttctaggtcctcttcccttttcttgacttttctcccttttctc 213  Q
    ||||||||   |||| |||||||||||   || ||| |||||| | | |||||||||||||||||||||||    
T  17438671 ttaccttaagaaatcgaaatcgcagcctcccttggt-ctcttctcctctcttgacttttctcccttttctc 17438602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 74 - 213
Target Start/End: Original strand, 22365531 - 22365670
Alignment:
Q  74 aatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttaccttagataatcaaaatcgcagc-cctt 172  Q
    ||||||||| |||||||||  ||||||||||||||| |||||||| || |||| ||||||||| ||||||||||||||| |||| ||||| ||||  |||    
T  22365531 aatcctaca-cttgttaaatttaatcatcagaattacagacttaataagattgaatgctagtctcacccttaccttagaaaatcgaaatcccagcttctt 22365629  T
Q  173 ctaggtcctcttcccttttcttgacttttctcccttttctc 213  Q
     | ||| ||  || ||| |||||||||||||||||||||||    
T  22365630 gttggttcttctctcttctcttgacttttctcccttttctc 22365670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 62 - 150
Target Start/End: Complemental strand, 20501318 - 20501230
Alignment:
Q  62 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctta 150  Q
    |||||||||| ||| |||| ||| ||||||| |||||||||||||| |||| |||||||| |||| ||| |||||||||||||||||||    
T  20501318 ttctcaaaaagtaaccctaaaacatgttaaatctaatcatcagaatcataggcttaagaagattgaatgttagtcccacccttacctta 20501230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 86 - 213
Target Start/End: Original strand, 22996699 - 22996827
Alignment:
Q  86 tgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttaccttagataatcaaaatc-gcagcccttctaggtcctctt 184  Q
    ||||||| |||||||||| ||| |||| |||||||| |||| ||| ||||| |||||||||||||   |||| ||||| ||||||  ||| ||| |||||    
T  22996699 tgttaaatctaatcatcaaaatcataggcttaagaagattgaatgttagtctcacccttaccttaacaaatcgaaatcggcagcctctcttggttctctt 22996798  T
Q  185 cccttttcttgacttttctcccttttctc 213  Q
    | ||| |||||||||||||||||||||||    
T  22996799 ctcttctcttgacttttctcccttttctc 22996827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 138 - 204
Target Start/End: Complemental strand, 6607474 - 6607408
Alignment:
Q  138 cacccttaccttagataatcaaaatcgcagcccttctaggtcctcttcccttttcttgacttttctc 204  Q
    |||||||||||||||||||| |||||||||||||||| ||| ||||||||||| ||||||| |||||    
T  6607474 cacccttaccttagataatcgaaatcgcagcccttcttggttctcttccctttccttgactcttctc 6607408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 83 - 169
Target Start/End: Complemental strand, 13507299 - 13507213
Alignment:
Q  83 acttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttaccttagataatcaaaatcgcagcc 169  Q
    ||||||||||  ||||||||||||||| |||||||| || |||| ||||||||| |||||||||||||||  || ||||||||||||    
T  13507299 acttgttaaatttaatcatcagaattacagacttaataagattgaatgctagtctcacccttaccttagaatatgaaaatcgcagcc 13507213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 83 - 169
Target Start/End: Complemental strand, 13596831 - 13596745
Alignment:
Q  83 acttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttaccttagataatcaaaatcgcagcc 169  Q
    ||||||||||  ||||||||||||||| |||||||| || |||| ||||||||| |||||||||||||||  || ||||||||||||    
T  13596831 acttgttaaatttaatcatcagaattacagacttaataagattgaatgctagtctcacccttaccttagaatatgaaaatcgcagcc 13596745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 66 - 143
Target Start/End: Complemental strand, 17085154 - 17085077
Alignment:
Q  66 caaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccaccct 143  Q
    |||||||||| |||||||||||||||| |||||||||| ||||| || |||||||| |||| ||| ||||||||||||    
T  17085154 caaaaactaaccctacaacttgttaaatctaatcatcataattaaaggcttaagaagattgaatgttagtcccaccct 17085077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 66 - 143
Target Start/End: Complemental strand, 17085388 - 17085311
Alignment:
Q  66 caaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccaccct 143  Q
    |||||||||| |||||||||||||||| |||||||||| ||||| || |||||||| |||| ||| ||||||||||||    
T  17085388 caaaaactaaccctacaacttgttaaatctaatcatcataattaaaggcttaagaagattgaatgttagtcccaccct 17085311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 57 - 213
Target Start/End: Complemental strand, 17266235 - 17266080
Alignment:
Q  57 ccaatttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttaccttagataat 156  Q
    |||| ||||| ||||| ||||||||| |||||||||   || ||||||||||| ||| |||| || |||| ||| ||||| ||||||||||||||| |||    
T  17266235 ccaacttctctaaaac-aatcctaca-cttgttaaatacaaccatcagaattacagatttaataagattgaatgttagtctcacccttaccttagaaaat 17266138  T
Q  157 caaaatcgcagcc-cttctaggtcctcttcccttttcttgacttttctcccttttctc 213  Q
    | ||||||||||| ||  | |||||||||  ||| ||||||||||| |||||||||||    
T  17266137 cgaaatcgcagcctctctttggtcctcttatcttctcttgacttttatcccttttctc 17266080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 69 - 150
Target Start/End: Original strand, 22184011 - 22184092
Alignment:
Q  69 aaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctta 150  Q
    ||||||| |||||||||||||||| ||||||||||||||||||  |||||||||| || ||| || || |||||||||||||    
T  22184011 aaactaaacctacaacttgttaaatctaatcatcagaattataagcttaagaaaactgaatgttattctcacccttacctta 22184092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 40 - 213
Target Start/End: Original strand, 22984508 - 22984678
Alignment:
Q  40 acttttaacctaattccccaatttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtccca 139  Q
    ||||||||||||||| || | ||||   |||||||| |||||| | ||||||| |||||||||||||| | || |||||||| |||| ||| ||||| ||    
T  22984508 acttttaacctaatttccaactttc---aaaactaaacctaca-catgttaaatctaatcatcagaatcaaaggcttaagaagattgaatgttagtctca 22984603  T
Q  140 cccttaccttagataatcaaaatc-gcagcccttctaggtcctcttcccttttcttgacttttctcccttttctc 213  Q
    ||||||||| |   |||| ||||| ||| ||  ||| ||| |||||| ||| |||||||||||||||||||||||    
T  22984604 cccttacctaaacaaatcgaaatcggcatcctctcttggttctcttctcttctcttgacttttctcccttttctc 22984678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 62 - 153
Target Start/End: Original strand, 24049364 - 24049455
Alignment:
Q  62 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttaccttagat 153  Q
    |||||||||||||| |||||||| |||||||  ||||  ||||||| ||||||| ||||  |||| ||| ||||||||||||||||||||||    
T  24049364 ttctcaaaaactaaacctacaacatgttaaatataattttcagaatcatagactcaagattattgaatgttagtcccacccttaccttagat 24049455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 62 - 168
Target Start/End: Original strand, 20404033 - 20404139
Alignment:
Q  62 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttaccttagataatcaaaa 161  Q
    |||||||||||||| |||||||| |||||||   ||| |||||||| ||||||| ||||  |||| ||| |||||||||||||||||| ||  || ||||    
T  20404033 ttctcaaaaactaaacctacaacatgttaaatacaattatcagaatcatagactcaagattattgaatgttagtcccacccttaccttggaatataaaaa 20404132  T
Q  162 tcgcagc 168  Q
    |||||||    
T  20404133 tcgcagc 20404139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 62 - 168
Target Start/End: Original strand, 32810448 - 32810554
Alignment:
Q  62 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttaccttagataatcaaaa 161  Q
    |||||||||||||| |||||||| |||||||   |||  ||||||| ||||||| ||||  |||| ||| |||||||||||||||||||||  || ||||    
T  32810448 ttctcaaaaactaaacctacaacatgttaaatacaattttcagaatcatagactcaagattattgaatgttagtcccacccttaccttagaatataaaaa 32810547  T
Q  162 tcgcagc 168  Q
    |||||||    
T  32810548 tcgcagc 32810554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 40 - 168
Target Start/End: Complemental strand, 45289872 - 45289744
Alignment:
Q  40 acttttaacc-taattccccaatttctcaaaaactaatcc-tacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcc 137  Q
    |||||||||| |||||||| |||| |||||||||||| || |||||| ||||||| | |||  | ||||| ||||||||||||  |||| ||| ||||||    
T  45289872 acttttaaccctaattcccaaatt-ctcaaaaactaaaccctacaacatgttaaatccaatttttagaatcatagacttaagattattgaatgttagtcc 45289774  T
Q  138 cacccttaccttagataatcaaaatcgcagc 168  Q
    ||||||||||||| | |||||||||||||||    
T  45289773 cacccttacctta-acaatcaaaatcgcagc 45289744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 62 - 151
Target Start/End: Complemental strand, 40492115 - 40492027
Alignment:
Q  62 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttaccttag 151  Q
    ||||| |||| |||||||||| |||||||||  ||||||||| ||||| |||||||| || |||| ||||||||| ||||||||||||||    
T  40492115 ttctctaaaattaatcctaca-cttgttaaatttaatcatcaaaattacagacttaataagattgaatgctagtctcacccttaccttag 40492027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 62 - 213
Target Start/End: Complemental strand, 1326533 - 1326383
Alignment:
Q  62 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttaccttagataatcaaaa 161  Q
    |||||||||||||| |||||||| |||||||   |||  ||||||| ||||||| ||||  |||| ||| ||||||||||||||||||| | ||| ||||    
T  1326533 ttctcaaaaactaaacctacaacatgttaaatacaattttcagaatcatagactcaagattattgaatgttagtcccacccttacctta-acaatgaaaa 1326435  T
Q  162 tcgcagcccttctaggtcctcttcccttttcttgac-ttttctcccttttctc 213  Q
    | ||||| | ||||||| ||  |||||| ||||| | ||||||||||||||||    
T  1326434 ttgcagctc-tctaggtgcttctcccttctcttggctttttctcccttttctc 1326383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 62 - 150
Target Start/End: Complemental strand, 19154100 - 19154012
Alignment:
Q  62 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctta 150  Q
    ||||||||||||||||||||||| |||||||   ||  |||||||| ||| |||||| | ||||| |||||||||||||| ||||||||    
T  19154100 ttctcaaaaactaatcctacaacctgttaaatacaactatcagaatcataaacttaatagaattgaatgctagtcccaccgttacctta 19154012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 43 - 150
Target Start/End: Complemental strand, 14102456 - 14102352
Alignment:
Q  43 tttaacctaattccccaatttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccaccc 142  Q
    ||||||||||||| |||| ||| | |||  |||||||||| |||||||||  ||||||||||||||| |||||||| || |||| ||||||||| |||||    
T  14102456 tttaacctaattctccaacttcgctaaat-taatcctaca-cttgttaaat-taatcatcagaattacagacttaataagattgaatgctagtctcaccc 14102360  T
Q  143 ttacctta 150  Q
    ||||||||    
T  14102359 ttacctta 14102352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 69 - 152
Target Start/End: Original strand, 23661266 - 23661349
Alignment:
Q  69 aaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttaccttaga 152  Q
    ||||||| ||| |||| ||||||| ||||| |||||||| |||| |||| ||| |||| |||| ||||||||||||||||||||    
T  23661266 aaactaaacctccaacatgttaaatctaattatcagaatcataggcttatgaagattgaatgccagtcccacccttaccttaga 23661349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 84 - 213
Target Start/End: Original strand, 26220556 - 26220684
Alignment:
Q  84 cttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttaccttagataatcaaaatcgcagcccttctaggtcctct 183  Q
    |||||||||  ||||||||||||||| |||||||| || |||| ||| ||||| ||||||||||||| |  ||  |||||||||||| | |||||| ||     
T  26220556 cttgttaaatttaatcatcagaattacagacttaataagattgaatgttagtctcacccttaccttataagat-gaaatcgcagcccctttaggtcttc- 26220653  T
Q  184 tcccttttcttgac-ttttctcccttttctc 213  Q
    |||||| ||||| | ||||||||||||||||    
T  26220654 tcccttctcttggctttttctcccttttctc 26220684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 84 - 213
Target Start/End: Complemental strand, 26222397 - 26222269
Alignment:
Q  84 cttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttaccttagataatcaaaatcgcagcccttctaggtcctct 183  Q
    |||||||||  ||||||||||||||| |||||||| || |||| ||| ||||| ||||||||||||| |  ||  |||||||||||| |||||||| ||     
T  26222397 cttgttaaatttaatcatcagaattacagacttaataagattgaatgttagtctcacccttaccttataagat-gaaatcgcagcccctctaggtcttc- 26222300  T
Q  184 tcccttttcttgac-ttttctcccttttctc 213  Q
    ||| || ||||| | ||||||||||||||||    
T  26222299 tccattctcttggctttttctcccttttctc 26222269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 69 - 150
Target Start/End: Complemental strand, 2418082 - 2418003
Alignment:
Q  69 aaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctta 150  Q
    |||||||||||||| ||| ||||| |||||||||||||||| |  | ||||||||||| ||||||||| |||||||||||||    
T  2418082 aaactaatcctaca-ctttttaaatctaatcatcagaattacat-cataagaaaattgaatgctagtctcacccttacctta 2418003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 101 - 169
Target Start/End: Complemental strand, 14396960 - 14396892
Alignment:
Q  101 tcagaattatagacttaagaaaattggatgctagtcccacccttaccttagataatcaaaatcgcagcc 169  Q
    ||||||| |||| |||||||| |||| ||| ||||||||||||||||||| | ||| ||||||||||||    
T  14396960 tcagaatcataggcttaagaagattgaatgttagtcccacccttaccttaaagaatgaaaatcgcagcc 14396892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 62 - 150
Target Start/End: Complemental strand, 16412723 - 16412635
Alignment:
Q  62 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctta 150  Q
    |||||||||||||| |||||||| |||||||   |||  ||||||| ||||||| ||||  |||| ||| |||||||||||||||||||    
T  16412723 ttctcaaaaactaaacctacaacatgttaaatacaattttcagaatcatagactcaagattattgaatgttagtcccacccttacctta 16412635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 86 - 150
Target Start/End: Complemental strand, 17460272 - 17460208
Alignment:
Q  86 tgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctta 150  Q
    ||||||| ||||| |||||||| |||| |||||||| |||| ||| |||||||||||||||||||    
T  17460272 tgttaaatctaattatcagaatcataggcttaagaagattgaatgttagtcccacccttacctta 17460208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 62 - 150
Target Start/End: Original strand, 19897268 - 19897356
Alignment:
Q  62 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctta 150  Q
    |||||||||||||| |||||||| |||||||   |||  ||||||| ||||||| ||||  |||| ||| |||||||||||||||||||    
T  19897268 ttctcaaaaactaaacctacaacatgttaaatacaattttcagaatcatagactcaagattattgaatgttagtcccacccttacctta 19897356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 62 - 153
Target Start/End: Original strand, 20457432 - 20457523
Alignment:
Q  62 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttaccttagat 153  Q
    |||||||||||||| |||||||| |||||||   |||  |||| || ||||||| ||||  |||| ||| ||||||||||||||||||||||    
T  20457432 ttctcaaaaactaaacctacaacatgttaaatacaattttcaggatcatagactcaagattattgaatgttagtcccacccttaccttagat 20457523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 62 - 153
Target Start/End: Complemental strand, 27471825 - 27471734
Alignment:
Q  62 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttaccttagat 153  Q
    |||||||||||||| |||||||| |||||||   |||  ||| ||| ||||||| ||||  |||| ||| ||||||||||||||||||||||    
T  27471825 ttctcaaaaactaaacctacaacatgttaaatacaattttcaaaatcatagactcaagattattgaatgttagtcccacccttaccttagat 27471734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 62 - 153
Target Start/End: Original strand, 32122482 - 32122573
Alignment:
Q  62 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttaccttagat 153  Q
    |||||||||||||| |||||||| |||||||   |||  ||||||| ||||||| ||||  |||| ||| |||| |||||||||||||||||    
T  32122482 ttctcaaaaactaaacctacaacatgttaaatacaattttcagaatcatagactcaagattattgaatgttagttccacccttaccttagat 32122573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 62 - 213
Target Start/End: Original strand, 22966818 - 22966968
Alignment:
Q  62 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagac-ttaagaaaattggatgctagtcccacccttaccttagataatcaaa 160  Q
    ||||| ||||| ||||||||| |||||||||   |||||||||||||||| |  |||| | ||||| ||||||||| |||||||||||||||  |  |||    
T  22966818 ttctctaaaaccaatcctaca-cttgttaaataaaatcatcagaattatatagattaatagaattgaatgctagtctcacccttaccttagaataagaaa 22966916  T
Q  161 atcgcagcccttctaggtcctcttcccttttcttgac-ttttctcccttttctc 213  Q
    |||||||||  |||| || ||  |||||| ||||| | ||||||||||||||||    
T  22966917 atcgcagcc--tctatgtgcttctcccttctcttggctttttctcccttttctc 22966968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 40 - 179
Target Start/End: Original strand, 1485239 - 1485378
Alignment:
Q  40 acttttaacc-taattccccaatttctcaaaaactaat-cctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcc 137  Q
    |||||||||| |||||||| |||| ||||||||||||  |||||||| ||||||| | |||  ||||||| |  |||||||||  |||| ||| ||||||    
T  1485239 acttttaaccctaattcccaaatt-ctcaaaaactaaaacctacaacatgttaaatccaattttcagaatcaatgacttaagattattgaatgttagtcc 1485337  T
Q  138 cacccttaccttagataatcaaaatcgcagcccttctaggtc 179  Q
    ||||||||||||| |  || ||||||||||| || |||||||    
T  1485338 cacccttaccttata-gatgaaaatcgcagcactcctaggtc 1485378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 40 - 179
Target Start/End: Original strand, 4484117 - 4484256
Alignment:
Q  40 acttttaacc-taattccccaatttctcaaaaactaat-cctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcc 137  Q
    |||||||||| |||||||| |||| ||||||||||||  |||||||| ||||||| | |||  ||||||| |  |||||||||  |||| ||| ||||||    
T  4484117 acttttaaccctaattcccaaatt-ctcaaaaactaaaacctacaacatgttaaatccaattttcagaatcaatgacttaagattattgaatgttagtcc 4484215  T
Q  138 cacccttaccttagataatcaaaatcgcagcccttctaggtc 179  Q
    ||||||||||||| |  || ||||||||||| || |||||||    
T  4484216 cacccttaccttata-gatgaaaatcgcagcactcctaggtc 4484256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 40 - 179
Target Start/End: Complemental strand, 14408769 - 14408630
Alignment:
Q  40 acttttaacc-taattccccaatttctcaaaaactaat-cctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcc 137  Q
    |||||||||| |||||||| |||| ||||||||||||  |||||||| ||||||| | |||  ||||||| |  |||||||||  |||| ||| ||||||    
T  14408769 acttttaaccctaattcccaaatt-ctcaaaaactaaaacctacaacatgttaaatccaattttcagaatcaatgacttaagattattgaatgttagtcc 14408671  T
Q  138 cacccttaccttagataatcaaaatcgcagcccttctaggtc 179  Q
    ||||||||||||| |  || ||||||||||| || |||||||    
T  14408670 cacccttaccttata-gatgaaaatcgcagcactcctaggtc 14408630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 40 - 179
Target Start/End: Original strand, 14824613 - 14824752
Alignment:
Q  40 acttttaacc-taattccccaatttctcaaaaactaat-cctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcc 137  Q
    |||||||||| |||||||| |||| ||||||||||||  |||||||| ||||||| | |||  ||||||| |  |||||||||  |||| ||| ||||||    
T  14824613 acttttaaccctaattcccaaatt-ctcaaaaactaaaacctacaacatgttaaatccaattttcagaatcaatgacttaagattattgaatgttagtcc 14824711  T
Q  138 cacccttaccttagataatcaaaatcgcagcccttctaggtc 179  Q
    ||||||||||||| |  || ||||||||||| || |||||||    
T  14824712 cacccttaccttata-gatgaaaatcgcagcactcctaggtc 14824752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 62 - 213
Target Start/End: Complemental strand, 24485343 - 24485192
Alignment:
Q  62 ttctcaaaaactaat-cctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttaccttagataatcaaa 160  Q
    ||||||||||||||  |||||||| |||||||   |||  ||||||| ||||||| ||||  |||  ||| ||||||||||||||||||| |  || |||    
T  24485343 ttctcaaaaactaaaacctacaacatgttaaatacaattttcagaatcatagactcaagattattaaatgttagtcccacccttaccttata-gatgaaa 24485245  T
Q  161 atcgcagcccttctaggtcctcttcccttttcttgac-ttttctcccttttctc 213  Q
    |||||||| || ||||||| || |||||  ||||||| ||||||||||||||||    
T  24485244 atcgcagcactcctaggtcttc-tccctcctcttgactttttctcccttttctc 24485192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 62 - 150
Target Start/End: Original strand, 11361271 - 11361359
Alignment:
Q  62 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctta 150  Q
    |||||||||||||| |||||||| |||||||   |||  | ||||| ||||||| ||||  |||| ||| |||||||||||||||||||    
T  11361271 ttctcaaaaactaaacctacaacatgttaaatacaatttttagaatcatagactcaagattattgaatgttagtcccacccttacctta 11361359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 40 - 150
Target Start/End: Complemental strand, 20045520 - 20045409
Alignment:
Q  40 acttttaacc-taattccccaatttctcaaaaactaat-cctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcc 137  Q
    |||||||||| |||||||| ||||| |||||||||||  |||||||| ||||||| | |||  ||||||| |  |||||||||  |||| ||| ||||||    
T  20045520 acttttaaccctaattcccaaattt-tcaaaaactaaaacctacaacatgttaaatccaattttcagaatcaatgacttaagattattgaatgttagtcc 20045422  T
Q  138 cacccttacctta 150  Q
    |||||||||||||    
T  20045421 cacccttacctta 20045409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 101 - 153
Target Start/End: Complemental strand, 21999487 - 21999435
Alignment:
Q  101 tcagaattatagacttaagaaaattggatgctagtcccacccttaccttagat 153  Q
    ||||||||||||||||||||  | || ||| ||||||||||||||||||||||    
T  21999487 tcagaattatagacttaagatcactgaatgatagtcccacccttaccttagat 21999435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 62 - 153
Target Start/End: Complemental strand, 15202394 - 15202303
Alignment:
Q  62 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttaccttagat 153  Q
    |||||||||||||| |||||||| | |||||   |||  ||||||| ||||||| ||||  |||| ||| ||||| ||||||||||||||||    
T  15202394 ttctcaaaaactaaacctacaacatattaaatacaattttcagaatcatagactcaagattattgaatgttagtctcacccttaccttagat 15202303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 86 - 149
Target Start/End: Complemental strand, 22418651 - 22418588
Alignment:
Q  86 tgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctt 149  Q
    ||||||| |||||||||||||||||   ||||||| ||||| ||| ||||| ||||||||||||    
T  22418651 tgttaaatctaatcatcagaattatcagcttaagagaattgaatgttagtctcacccttacctt 22418588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 62 - 153
Target Start/End: Complemental strand, 37609810 - 37609719
Alignment:
Q  62 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttaccttagat 153  Q
    |||||||||||||| |||||||| |||||||   |||  | ||||| ||||||| ||||  |||| ||| ||||| ||||||||||||||||    
T  37609810 ttctcaaaaactaaacctacaacatgttaaatacaatttttagaatcatagactcaagattattgaatgttagtctcacccttaccttagat 37609719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 122 - 168
Target Start/End: Original strand, 6521259 - 6521304
Alignment:
Q  122 aattggatgctagtcccacccttaccttagataatcaaaatcgcagc 168  Q
    ||||| ||||||||| ||||||||||||| |||||||||||||||||    
T  6521259 aattgaatgctagtctcacccttacctta-ataatcaaaatcgcagc 6521304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 40 - 168
Target Start/End: Complemental strand, 18677387 - 18677259
Alignment:
Q  40 acttttaacc-taattccccaatttctcaaaaactaat-cctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcc 137  Q
    |||||||||| |||||||| |||| ||||||||| ||  |||||||| ||||||| | |||  ||||||| |  |||||||||  |||| ||| ||||||    
T  18677387 acttttaaccctaattcccaaatt-ctcaaaaacgaaaacctacaacatgttaaatccaattttcagaatcaatgacttaagattattgaatgttagtcc 18677289  T
Q  138 cacccttaccttagataatcaaaatcgcagc 168  Q
    ||||||||||||| | | |||||||||||||    
T  18677288 cacccttaccttata-actcaaaatcgcagc 18677259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 62 - 150
Target Start/End: Complemental strand, 21697504 - 21697416
Alignment:
Q  62 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagac-ttaagaaaattggatgctagtcccacccttacctta 150  Q
    ||||| ||||| ||||||||| |||||||||   |||||||||||||||| |  |||| | ||||| ||||||||| |||||||||||||    
T  21697504 ttctctaaaaccaatcctaca-cttgttaaataaaatcatcagaattatatagattaatagaattgaatgctagtctcacccttacctta 21697416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 101 - 150
Target Start/End: Complemental strand, 21966750 - 21966701
Alignment:
Q  101 tcagaattatagacttaagaaaattggatgctagtcccacccttacctta 150  Q
    ||||||||||||||||||||  | || ||| |||||||||||||||||||    
T  21966750 tcagaattatagacttaagatcactgaatgatagtcccacccttacctta 21966701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 86 - 150
Target Start/End: Complemental strand, 20532600 - 20532536
Alignment:
Q  86 tgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctta 150  Q
    ||||||| |||||||||||||||||   ||||| | ||||| ||| ||||| |||||||||||||    
T  20532600 tgttaaatctaatcatcagaattatcagcttaatagaattgaatgttagtctcacccttacctta 20532536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 101 - 153
Target Start/End: Complemental strand, 21979516 - 21979464
Alignment:
Q  101 tcagaattatagacttaagaaaattggatgctagtcccacccttaccttagat 153  Q
    ||||||||||||||||||||  | || ||| |||||||||| |||||||||||    
T  21979516 tcagaattatagacttaagatcactgaatgatagtcccacctttaccttagat 21979464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 101 - 153
Target Start/End: Complemental strand, 21983001 - 21982949
Alignment:
Q  101 tcagaattatagacttaagaaaattggatgctagtcccacccttaccttagat 153  Q
    ||||||||||||||||||||  | || ||| |||||||||||||| |||||||    
T  21983001 tcagaattatagacttaagatcactgaatgatagtcccacccttagcttagat 21982949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 101 - 153
Target Start/End: Complemental strand, 22005126 - 22005074
Alignment:
Q  101 tcagaattatagacttaagaaaattggatgctagtcccacccttaccttagat 153  Q
    ||||||||||||||| ||||  | || ||| ||||||||||||||||||||||    
T  22005126 tcagaattatagactgaagatcactgaatgatagtcccacccttaccttagat 22005074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 62 - 150
Target Start/End: Complemental strand, 38549221 - 38549133
Alignment:
Q  62 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctta 150  Q
    |||||||||||||| || ||||| |||||||   |||  ||||||| ||||||| ||||  |||| ||| |||||| ||||||||||||    
T  38549221 ttctcaaaaactaaacccacaacatgttaaatacaattttcagaatcatagactcaagattattgaatgttagtccaacccttacctta 38549133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 101 - 153
Target Start/End: Complemental strand, 44522228 - 44522176
Alignment:
Q  101 tcagaattatagacttaagaaaattggatgctagtcccacccttaccttagat 153  Q
    ||||||||||| ||||||||  | || ||| ||||||||||||||||||||||    
T  44522228 tcagaattataaacttaagattactgaatgatagtcccacccttaccttagat 44522176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 74; Significance: 4e-34; HSPs: 74)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 138 - 215
Target Start/End: Complemental strand, 16929271 - 16929194
Alignment:
Q  138 cacccttaccttagataatcaaaatcgcagcccttctaggtcctcttcccttttcttgacttttctcccttttctctg 215  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  16929271 cacccttaccttagataatcaaaatcgcagtccttctaggtcctcttcccttttcttgacttttctcccttttctctg 16929194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 138 - 215
Target Start/End: Original strand, 35367129 - 35367206
Alignment:
Q  138 cacccttaccttagataatcaaaatcgcagcccttctaggtcctcttcccttttcttgacttttctcccttttctctg 215  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35367129 cacccttaccttagataatcgaaatcgcagcccttctaggtcctcttcccttttcttgacttttctcccttttctctg 35367206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 138 - 215
Target Start/End: Complemental strand, 21064428 - 21064351
Alignment:
Q  138 cacccttaccttagataatcaaaatcgcagcccttctaggtcctcttcccttttcttgacttttctcccttttctctg 215  Q
    |||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  21064428 cacccttaccttagataatcgaaatcgcaacccttctaggtcctcttcccttttcttgacttttctcccttttctctg 21064351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 138 - 215
Target Start/End: Complemental strand, 123407 - 123330
Alignment:
Q  138 cacccttaccttagataatcaaaatcgcagcccttctaggtcctcttcccttttcttgacttttctcccttttctctg 215  Q
    |||||||||||||||||||| |||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||    
T  123407 cacccttaccttagataatcgaaatcgcagcccttcttggttctcttcccttttcttgacttttctcccttttctctg 123330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 138 - 215
Target Start/End: Complemental strand, 13732752 - 13732675
Alignment:
Q  138 cacccttaccttagataatcaaaatcgcagcccttctaggtcctcttcccttttcttgacttttctcccttttctctg 215  Q
    |||||||||||||||||||| |||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||    
T  13732752 cacccttaccttagataatcgaaatcgcagcccttcttggttctcttcccttttcttgacttttctcccttttctctg 13732675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 138 - 215
Target Start/End: Original strand, 48786218 - 48786295
Alignment:
Q  138 cacccttaccttagataatcaaaatcgcagcccttctaggtcctcttcccttttcttgacttttctcccttttctctg 215  Q
    |||||||||||||||||||| |||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||    
T  48786218 cacccttaccttagataatcgaaatcgcagcccttcttggttctcttcccttttcttgacttttctcccttttctctg 48786295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 138 - 215
Target Start/End: Original strand, 16007322 - 16007399
Alignment:
Q  138 cacccttaccttagataatcaaaatcgcagcccttctaggtcctcttcccttttcttgacttttctcccttttctctg 215  Q
    |||||||||||||||||||| ||| |||||||||||| ||| ||||||||||||||||||||||||||||||||||||    
T  16007322 cacccttaccttagataatcgaaaacgcagcccttcttggttctcttcccttttcttgacttttctcccttttctctg 16007399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 62 - 151
Target Start/End: Original strand, 42462835 - 42462924
Alignment:
Q  62 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttaccttag 151  Q
    |||| ||||||||| |||||||| ||||||| |||||||||||||| |||| |||||||| |||| ||| ||||||||||||||||||||    
T  42462835 ttctaaaaaactaaccctacaacatgttaaatctaatcatcagaatcataggcttaagaagattgaatgttagtcccacccttaccttag 42462924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 62 - 150
Target Start/End: Original strand, 16997056 - 16997144
Alignment:
Q  62 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctta 150  Q
    |||| ||||||||| |||||||| ||||||| |||||||||||||| |||| |||||||| |||| ||| |||||||||||||||||||    
T  16997056 ttctaaaaaactaaccctacaacatgttaaatctaatcatcagaatcataggcttaagaagattgaatgttagtcccacccttacctta 16997144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 40 - 150
Target Start/End: Complemental strand, 11768197 - 11768090
Alignment:
Q  40 acttttaacctaattccccaatttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtccca 139  Q
    ||||||||||||||| || | ||||  ||||||||| |||||| | ||||||| ||||||||||||||||||| |||||||| |||| ||| ||||||||    
T  11768197 acttttaacctaatttccaactttc--aaaaactaaacctaca-catgttaaatctaatcatcagaattataggcttaagaagattgaatgttagtccca 11768101  T
Q  140 cccttacctta 150  Q
    |||||||||||    
T  11768100 cccttacctta 11768090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 69 - 150
Target Start/End: Complemental strand, 37793473 - 37793392
Alignment:
Q  69 aaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctta 150  Q
    ||||||| |||||||||||||||| ||||||||||||||||  | |||||||| |||| ||| |||||||||||||||||||    
T  37793473 aaactaaacctacaacttgttaaatctaatcatcagaattaacggcttaagaagattgaatgttagtcccacccttacctta 37793392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 62 - 150
Target Start/End: Complemental strand, 9176922 - 9176835
Alignment:
Q  62 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctta 150  Q
    ||||| ||||||||||||||| |||||||||  |||| |||||||||| |||||||| ||||||| ||||||||| |||||||||||||    
T  9176922 ttctctaaaactaatcctaca-cttgttaaatttaattatcagaattacagacttaataaaattgaatgctagtctcacccttacctta 9176835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 62 - 213
Target Start/End: Original strand, 16496258 - 16496407
Alignment:
Q  62 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttaccttagataatcaaaa 161  Q
    ||||| ||||| ||||||||| |||||||||  ||||||||||||||| |||||||| | ||||| ||||||||| |||||||| ||||||  |  ||||    
T  16496258 ttctctaaaaccaatcctaca-cttgttaaatttaatcatcagaattacagacttaatagaattgaatgctagtctcacccttatcttagaataagaaaa 16496356  T
Q  162 tcgcagcccttctaggtcctcttcccttttcttgac-ttttctcccttttctc 213  Q
    ||||||||  |||| || ||  |||||| ||||| | ||||||||||||||||    
T  16496357 tcgcagcc--tctatgtgcttctcccttctcttggctttttctcccttttctc 16496407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 43 - 166
Target Start/End: Original strand, 14037064 - 14037185
Alignment:
Q  43 tttaacctaattccccaatttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccaccc 142  Q
    ||||||||||||| ||| ||| || ||||||||||||||| |||||||||   || ||||||||||| |||||||| | ||||| ||||||||| |||||    
T  14037064 tttaacctaattctccatttt-tctaaaactaatcctaca-cttgttaaatacaaccatcagaattacagacttaatagaattgaatgctagtctcaccc 14037161  T
Q  143 ttaccttagataatcaaaatcgca 166  Q
    ||||||||   | |||||||||||    
T  14037162 ttaccttaagaattcaaaatcgca 14037185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 43 - 166
Target Start/End: Original strand, 14347094 - 14347215
Alignment:
Q  43 tttaacctaattccccaatttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccaccc 142  Q
    ||||||||||||| ||| ||| || ||||||||||||||| |||||||||   || ||||||||||| |||||||| | ||||| ||||||||| |||||    
T  14347094 tttaacctaattctccatttt-tctaaaactaatcctaca-cttgttaaatacaaccatcagaattacagacttaatagaattgaatgctagtctcaccc 14347191  T
Q  143 ttaccttagataatcaaaatcgca 166  Q
    ||||||||   | |||||||||||    
T  14347192 ttaccttaagaattcaaaatcgca 14347215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 43 - 168
Target Start/End: Original strand, 15117335 - 15117458
Alignment:
Q  43 tttaacctaattccccaatttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccaccc 142  Q
    ||||||||||||| |||| ||||| |||  |||||||||| |||||||||  |||||||||||| || |||||||| || |||| ||||||||| |||||    
T  15117335 tttaacctaattctccaacttctctaaat-taatcctaca-cttgttaaat-taatcatcagaagtacagacttaataagattgaatgctagtctcaccc 15117431  T
Q  143 ttaccttag-ataatcaaaatcgcagc 168  Q
    ||||||||| | |||| ||||||||||    
T  15117432 ttaccttagcaaaatcgaaatcgcagc 15117458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 43 - 213
Target Start/End: Original strand, 16324817 - 16324987
Alignment:
Q  43 tttaacctaattccccaatttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccaccc 142  Q
    ||||||||||||| |||| ||||| |||  |||||||||| |||||||||  |||||||||||| || |||||||| || |||| ||||||||| |||||    
T  16324817 tttaacctaattctccaacttctctaaat-taatcctaca-cttgttaaat-taatcatcagaagtacagacttaataagattgaatgctagtctcaccc 16324913  T
Q  143 ttaccttag-ataatcaaaatcgcag--cccttctaggtcctcttcccttttcttgacttttctcccttttctc 213  Q
    ||||||||| | |||| |||||| ||  | |||  |||| ||| || | | |||||||||||||||||||||||    
T  16324914 ttaccttagcaaaatcgaaatcgaagctctcttgaaggttctcctctcgtctcttgacttttctcccttttctc 16324987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 67 - 157
Target Start/End: Original strand, 38519652 - 38519742
Alignment:
Q  67 aaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttaccttagataatc 157  Q
    ||||||||| |||||||| || |||| ||||| |||||||| |||| |||||||| |||| ||| |||||||||||||||| |||| ||||    
T  38519652 aaaaactaaacctacaacatgctaaatctaattatcagaatcataggcttaagaagattgaatgttagtcccacccttaccatagaaaatc 38519742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 62 - 151
Target Start/End: Complemental strand, 130030 - 129942
Alignment:
Q  62 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttaccttag 151  Q
    |||||||||||||| | |||||| ||||||| |||||||||||||| |||  |||||| | |||| ||| ||||||||||||||||||||    
T  130030 ttctcaaaaactaaccatacaacatgttaaatctaatcatcagaatcataagcttaag-agattgaatgttagtcccacccttaccttag 129942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 84 - 213
Target Start/End: Original strand, 3387452 - 3387579
Alignment:
Q  84 cttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttaccttagataatcaaaatcgcagcccttctaggtcctct 183  Q
    |||||||||  |||||||||||||||  ||||||| || |||| ||| ||||| ||||||||||||| |  ||  |||||||||||| ||||| || |||    
T  3387452 cttgttaaatttaatcatcagaattacggacttaataagattgaatgttagtctcacccttaccttataagat-gaaatcgcagcccctctagctcttct 3387550  T
Q  184 tcccttttcttgacttttctcccttttctc 213  Q
    | |||| ||||| |||||||||||||||||    
T  3387551 t-ccttctcttggcttttctcccttttctc 3387579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 40 - 179
Target Start/End: Original strand, 27217699 - 27217837
Alignment:
Q  40 acttttaacc-taattccccaatttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtccc 138  Q
    |||||||||| |||||||| |||| |||||||||||| |||||||| ||||||| | |||  ||||||| |  |||||||||  |||| ||| |||||||    
T  27217699 acttttaaccctaattcccaaatt-ctcaaaaactaaacctacaacatgttaaatccaattttcagaatcaatgacttaagattattgaatgttagtccc 27217797  T
Q  139 acccttaccttagataatcaaaatcgcagcccttctaggtc 179  Q
    |||||||||||| |  || ||||||||||| || |||||||    
T  27217798 acccttaccttata-gatgaaaatcgcagcactcctaggtc 27217837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 43 - 150
Target Start/End: Original strand, 14045636 - 14045741
Alignment:
Q  43 tttaacctaattccccaatttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccaccc 142  Q
    ||||||||||||| ||||||| || ||||||||||||||| ||||||||    || ||||||||||| |||||||| | ||||| ||||||||| ||||     
T  14045636 tttaacctaattctccaattt-tctaaaactaatcctaca-cttgttaagtacaaccatcagaattacagacttaatagaattgaatgctagtctcacct 14045733  T
Q  143 ttacctta 150  Q
    ||||||||    
T  14045734 ttacctta 14045741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 43 - 150
Target Start/End: Original strand, 14355666 - 14355771
Alignment:
Q  43 tttaacctaattccccaatttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccaccc 142  Q
    ||||||||||||| ||||||| || ||||||||||||||| ||||||||    || ||||||||||| |||||||| | ||||| ||||||||| ||||     
T  14355666 tttaacctaattctccaattt-tctaaaactaatcctaca-cttgttaagtacaaccatcagaattacagacttaatagaattgaatgctagtctcacct 14355763  T
Q  143 ttacctta 150  Q
    ||||||||    
T  14355764 ttacctta 14355771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 86 - 213
Target Start/End: Complemental strand, 17052826 - 17052696
Alignment:
Q  86 tgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctta--gataatcaaaatc-gcagcccttctaggtcctc 182  Q
    ||||||| |||||||||| |||||| | |||||||| |||| ||| |||||||||||||||||||   | |||| ||||| ||||||  ||| | |  ||    
T  17052826 tgttaaatctaatcatcaaaattatcggcttaagaagattgaatgttagtcccacccttaccttaatcaaaatcgaaatcggcagcctctcttgattttc 17052727  T
Q  183 ttcccttttcttgacttttctcccttttctc 213  Q
    ||| ||| |||||||||||||||||||||||    
T  17052726 ttctcttctcttgacttttctcccttttctc 17052696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 115 - 213
Target Start/End: Original strand, 47832692 - 47832790
Alignment:
Q  115 ttaagaaaattggatgctagtcccacccttaccttagataatcaaaatcgcagcccttctaggtcctcttcccttttcttgac-ttttctcccttttctc 213  Q
    |||| ||||||| ||| ||||| ||||||||||||||| | ||||||||||||| ||||||||||   ||| ||| ||||||| ||||||||||||||||    
T  47832692 ttaataaaattgaatgttagtctcacccttaccttaga-attcaaaatcgcagctcttctaggtcactttctcttctcttgactttttctcccttttctc 47832790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 62 - 152
Target Start/End: Complemental strand, 5294520 - 5294430
Alignment:
Q  62 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttaccttaga 152  Q
    |||||||||||||| |||||||| |||||||   |||  ||||||| ||||||| ||||  |||| ||| |||||||||||||||||||||    
T  5294520 ttctcaaaaactaaacctacaacatgttaaatacaattttcagaatcatagactcaagattattgaatgttagtcccacccttaccttaga 5294430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 68 - 150
Target Start/End: Complemental strand, 11524881 - 11524799
Alignment:
Q  68 aaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctta 150  Q
    |||||||| ||| ||||||| |||| |||||| | |||||||||  ||||||||||||| ||| ||||| |||||||||||||    
T  11524881 aaaactaaaccttcaacttgctaaatctaatctttagaattataagcttaagaaaattgaatgttagtctcacccttacctta 11524799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 40 - 168
Target Start/End: Original strand, 13870183 - 13870311
Alignment:
Q  40 acttttaacc-taattccccaatttctcaaaaactaat-cctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcc 137  Q
    |||||||||| |||||||| |||| ||||||||||||  |||||||| ||||||| | |||  ||||||| |  |||||||||  |||| ||||||||||    
T  13870183 acttttaaccctaattcccaaatt-ctcaaaaactaaaacctacaacatgttaaatccaattttcagaatcaatgacttaagattattgaatgctagtcc 13870281  T
Q  138 cacccttaccttagataatcaaaatcgcagc 168  Q
    ||||||||||||| | | |||||||||||||    
T  13870282 cacccttaccttata-actcaaaatcgcagc 13870311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 69 - 150
Target Start/End: Complemental strand, 18455671 - 18455590
Alignment:
Q  69 aaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctta 150  Q
    ||||||| ||| |||| ||||||| ||||| |||||||| |||  |||||||| |||| ||| |||||||||||||||||||    
T  18455671 aaactaaacctccaacatgttaaatctaattatcagaatcatatgcttaagaagattgaatgttagtcccacccttacctta 18455590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 62 - 150
Target Start/End: Original strand, 8941228 - 8941316
Alignment:
Q  62 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctta 150  Q
    |||||||||||||| |||||||| |||||||   |||  ||||||| ||||||| ||||  |||| ||| |||||||||||||||||||    
T  8941228 ttctcaaaaactaaacctacaacatgttaaatacaattttcagaatcatagactcaagattattgaatgttagtcccacccttacctta 8941316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 62 - 213
Target Start/End: Complemental strand, 9945098 - 9944948
Alignment:
Q  62 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttaccttagataatcaaaa 161  Q
    |||||||||||||| |||||||| |||||||   |||  ||||||| ||||||| ||||  |||| ||| ||||| ||||||||||||| | | ||||||    
T  9945098 ttctcaaaaactaaacctacaacatgttaaatacaattttcagaatcatagactcaagattattgaatgttagtctcacccttaccttata-actcaaaa 9945000  T
Q  162 tcgcagcccttctaggtcctcttcccttttctt-gacttttctcccttttctc 213  Q
    |||| | | ||||||||| |  |||||| |||| | |||||||||||||||||    
T  9944999 tcgccg-ctttctaggtctttctcccttctcttggccttttctcccttttctc 9944948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 84 - 168
Target Start/End: Complemental strand, 10062949 - 10062865
Alignment:
Q  84 cttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttaccttagataatcaaaatcgcagc 168  Q
    |||||||||  ||||||||||||||| |||||||| || |||| ||| ||||| |||||||||||||||  |  |||||||||||    
T  10062949 cttgttaaatttaatcatcagaattacagacttaataagattgaatgttagtctcacccttaccttagaataagaaaatcgcagc 10062865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 86 - 150
Target Start/End: Complemental strand, 17016661 - 17016597
Alignment:
Q  86 tgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctta 150  Q
    ||||||| |||||||||||||||||   ||||||| ||||| ||||||||| |||||||||||||    
T  17016661 tgttaaatctaatcatcagaattatcagcttaagagaattgaatgctagtctcacccttacctta 17016597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 62 - 149
Target Start/End: Original strand, 11973109 - 11973196
Alignment:
Q  62 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctt 149  Q
    |||||||||||||| |||||||| |||||||   |||  ||||||| ||||||| ||||  |||| ||| ||||||||||||||||||    
T  11973109 ttctcaaaaactaaacctacaacatgttaaatacaattttcagaatcatagactcaagattattgaatgttagtcccacccttacctt 11973196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 122 - 213
Target Start/End: Original strand, 12902293 - 12902386
Alignment:
Q  122 aattggatgctagtcccacccttaccttagataatcaaaatcgcagcc--cttctaggtcctcttcccttttcttgac-ttttctcccttttctc 213  Q
    ||||| ||||||||| ||||||||||||| | ||||||||||||||||  | |||||||| ||||| ||| ||||| | ||||||||||||||||    
T  12902293 aattgaatgctagtctcacccttaccttata-aatcaaaatcgcagccttcctctaggtcatcttctcttctcttggctttttctcccttttctc 12902386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 115 - 213
Target Start/End: Original strand, 15440214 - 15440311
Alignment:
Q  115 ttaagaaaattggatgctagtcccacccttaccttagataatcaaaatcgcagcccttctaggtcctcttcccttttcttgac-ttttctcccttttctc 213  Q
    |||| ||||||| ||||||||| ||||||||||||||| |||  |||| ||||| | |||||||| || |||||| ||||||| ||||||||||||||||    
T  15440214 ttaataaaattgaatgctagtctcacccttaccttaga-aattgaaattgcagctc-tctaggtcttcctcccttctcttgactttttctcccttttctc 15440311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 40 - 150
Target Start/End: Complemental strand, 26355304 - 26355194
Alignment:
Q  40 acttttaacc-taattccccaatttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtccc 138  Q
    |||||||||| |||||||| |||| |||||||||||| |||||||| |||||||   |||  || |||| ||||||| ||||  |||| ||| |||||||    
T  26355304 acttttaaccctaattcccaaatt-ctcaaaaactaaacctacaacatgttaaatacaattttcggaatcatagactcaagattattgaatgttagtccc 26355206  T
Q  139 acccttacctta 150  Q
    ||||||||||||    
T  26355205 acccttacctta 26355194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 40 - 150
Target Start/End: Complemental strand, 26357756 - 26357646
Alignment:
Q  40 acttttaacc-taattccccaatttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtccc 138  Q
    |||||||||| |||||||| |||| |||||||||||| |||||||| |||||||   |||  || |||| ||||||| ||||  |||| ||| |||||||    
T  26357756 acttttaaccctaattcccaaatt-ctcaaaaactaaacctacaacatgttaaatacaattttcggaatcatagactcaagattattgaatgttagtccc 26357658  T
Q  139 acccttacctta 150  Q
    ||||||||||||    
T  26357657 acccttacctta 26357646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 62 - 152
Target Start/End: Complemental strand, 5295693 - 5295603
Alignment:
Q  62 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttaccttaga 152  Q
    |||||||||||||| |||||||| ||||||    |||  ||||||| ||||||| ||||  |||| ||| |||||||||||||||||||||    
T  5295693 ttctcaaaaactaaacctacaacatgttaattacaattttcagaatcatagactcaagattattgaatgttagtcccacccttaccttaga 5295603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 62 - 152
Target Start/End: Complemental strand, 5296866 - 5296776
Alignment:
Q  62 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttaccttaga 152  Q
    |||||||||||||| |||||||| ||||||    |||  ||||||| ||||||| ||||  |||| ||| |||||||||||||||||||||    
T  5296866 ttctcaaaaactaaacctacaacatgttaattacaattttcagaatcatagactcaagattattgaatgttagtcccacccttaccttaga 5296776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 95 - 168
Target Start/End: Original strand, 15113858 - 15113932
Alignment:
Q  95 taatcatcagaattatagacttaagaaaattggatgctagtcccacccttaccttag-ataatcaaaatcgcagc 168  Q
    |||||||||||| || |||||||| || |||| ||||||||| |||||||||||||| | |||| ||||||||||    
T  15113858 taatcatcagaagtacagacttaataagattgaatgctagtctcacccttaccttagcaaaatcgaaatcgcagc 15113932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 84 - 213
Target Start/End: Original strand, 48274487 - 48274615
Alignment:
Q  84 cttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttaccttagataatcaaaatcgcagcccttctaggtcctct 183  Q
    |||||||||  ||||||||||||||| |||||| | || |||| ||| ||||| ||||||||||||| | | |||||||| ||| | ||||||||| |      
T  48274487 cttgttaaatttaatcatcagaattacagacttgataagattgaatgttagtctcacccttaccttata-actcaaaatcacag-ctttctaggtctttc 48274584  T
Q  184 tcccttttcttgac-ttttctcccttttctc 213  Q
    |||||| ||||| | ||||||||||||||||    
T  48274585 tcccttctcttggctttttctcccttttctc 48274615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 40 - 179
Target Start/End: Original strand, 457160 - 457299
Alignment:
Q  40 acttttaacc-taattccccaatttctcaaaaactaat-cctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcc 137  Q
    |||||||||| |||||||| |||| ||||||||||||  |||||||| ||||||| | |||  ||||||| |  |||||||||  |||| ||| ||||||    
T  457160 acttttaaccctaattcccaaatt-ctcaaaaactaaaacctacaacatgttaaatccaattttcagaatcaatgacttaagattattgaatgttagtcc 457258  T
Q  138 cacccttaccttagataatcaaaatcgcagcccttctaggtc 179  Q
    ||||||||||||| |  || ||||||||||| || |||||||    
T  457259 cacccttaccttata-gatgaaaatcgcagcactcctaggtc 457299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 40 - 136
Target Start/End: Complemental strand, 9032623 - 9032530
Alignment:
Q  40 acttttaacctaattccccaatttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtc 136  Q
    ||||||||||||||| |  || |||||||||||||| |||| | | ||||||| ||||| |||||||| |||| ||||||||||||| ||| |||||    
T  9032623 acttttaacctaatttc--aaattctcaaaaactaaacctaga-catgttaaatctaataatcagaatcataggcttaagaaaattgaatgttagtc 9032530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 48 - 153
Target Start/End: Complemental strand, 14156493 - 14156389
Alignment:
Q  48 cctaattccccaatttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacc 147  Q
    |||||||| |||||| |||||| ||||| |||||||| ||| |||   |||  ||||||| ||||||| ||||  |||| ||| ||||||||||||||||    
T  14156493 cctaattctccaatt-ctcaaagactaaacctacaacatgtcaaataaaattttcagaatcatagactcaagattattgaatgatagtcccacccttacc 14156395  T
Q  148 ttagat 153  Q
    ||||||    
T  14156394 ttagat 14156389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 40 - 179
Target Start/End: Complemental strand, 15376038 - 15375899
Alignment:
Q  40 acttttaacc-taattccccaatttctcaaaaactaat-cctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcc 137  Q
    |||||||||| |||||||| |||| ||||||||||||  |||||||| ||||||| | |||  ||||||| |  |||||||||  |||| ||| ||||||    
T  15376038 acttttaaccctaattcccaaatt-ctcaaaaactaaaacctacaacatgttaaatccaattttcagaatcaatgacttaagattattgaatgttagtcc 15375940  T
Q  138 cacccttaccttagataatcaaaatcgcagcccttctaggtc 179  Q
    ||||||||||||| |  || ||||||||||| || |||||||    
T  15375939 cacccttaccttata-gatgaaaatcgcagcactcctaggtc 15375899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 40 - 179
Target Start/End: Complemental strand, 20384448 - 20384309
Alignment:
Q  40 acttttaacc-taattccccaatttctcaaaaactaat-cctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcc 137  Q
    |||||||||| |||||||| |||| ||||||||||||  |||||||| ||||||| | |||  ||||||| |  |||||||||  |||| ||| ||||||    
T  20384448 acttttaaccctaattcccaaatt-ctcaaaaactaaaacctacaacatgttaaatccaattttcagaatcaatgacttaagattattgaatgttagtcc 20384350  T
Q  138 cacccttaccttagataatcaaaatcgcagcccttctaggtc 179  Q
    ||||||||||||| |  || ||||||||||| || |||||||    
T  20384349 cacccttaccttata-gatgaaaatcgcagcactcctaggtc 20384309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 40 - 179
Target Start/End: Original strand, 41523757 - 41523896
Alignment:
Q  40 acttttaacc-taattccccaatttctcaaaaactaat-cctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcc 137  Q
    |||||||||| |||||||| |||| ||||||||||||  |||||||| ||||||| | |||  |||||||    |||||||||  |||| ||| ||||||    
T  41523757 acttttaaccctaattcccaaatt-ctcaaaaactaaaacctacaacatgttaaatccaattttcagaatcgatgacttaagattattgaatgttagtcc 41523855  T
Q  138 cacccttaccttagataatcaaaatcgcagcccttctaggtc 179  Q
    ||||||||||||| |  || ||||||||||| ||||||||||    
T  41523856 cacccttaccttata-gatgaaaatcgcagcacttctaggtc 41523896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 62 - 150
Target Start/End: Original strand, 8469296 - 8469384
Alignment:
Q  62 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctta 150  Q
    |||||||||||||| |||||||| |||||||   |||  ||||||| ||||||| || |  |||| ||| |||||||||||||||||||    
T  8469296 ttctcaaaaactaaacctacaacatgttaaatacaattttcagaatcatagactcaaaattattgaatgttagtcccacccttacctta 8469384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 40 - 179
Target Start/End: Complemental strand, 11392625 - 11392488
Alignment:
Q  40 acttttaacc-taattccccaatttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtccc 138  Q
    |||||||||| |||||||| |||| |||||||||||  ||||||||| ||||||   |||  ||||||| ||||||| ||||  |||| ||| |||||||    
T  11392625 acttttaaccctaattcccaaatt-ctcaaaaactatacctacaact-gttaaatacaattttcagaatcatagactcaagattattgaatgttagtccc 11392528  T
Q  139 acccttaccttagataatcaaaatcgcagcccttctaggtc 179  Q
    |||||||||||| |  || ||||||||||| || |||||||    
T  11392527 acccttaccttata-gatgaaaatcgcagcactcctaggtc 11392488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 62 - 150
Target Start/End: Complemental strand, 14269172 - 14269084
Alignment:
Q  62 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctta 150  Q
    |||||||||||||| |||||| | |||||||   |||  ||||||| ||||||| ||||  |||| ||| |||||||||||||||||||    
T  14269172 ttctcaaaaactaaacctacagcatgttaaatacaattttcagaatcatagactcaagattattgaatgttagtcccacccttacctta 14269084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 104 - 213
Target Start/End: Original strand, 18304654 - 18304763
Alignment:
Q  104 gaattatagacttaagaaaattggatgctagtcccacccttaccttagataatcaaaatcgcagcccttctaggtcctcttcc-cttttcttgac-tttt 201  Q
    |||||| ||| |||| | ||||| ||||||||| ||||||||||||| | ||| ||||||||||||  |||||||| ||| || ||| ||||| | ||||    
T  18304654 gaattacagaattaatagaattgtatgctagtctcacccttaccttaaagaatgaaaatcgcagcc--tctaggtcttctccctcttctcttggcttttt 18304751  T
Q  202 ctcccttttctc 213  Q
    ||||||||||||    
T  18304752 ctcccttttctc 18304763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 62 - 150
Target Start/End: Complemental strand, 23461721 - 23461633
Alignment:
Q  62 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctta 150  Q
    |||||||||||||| |||||||| |||||||   |||  ||||||| ||||||| ||||  |||| ||| ||||| |||||||||||||    
T  23461721 ttctcaaaaactaaacctacaacatgttaaatacaattttcagaatcatagactcaagattattgaatgttagtctcacccttacctta 23461633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 101 - 153
Target Start/End: Complemental strand, 42374354 - 42374302
Alignment:
Q  101 tcagaattatagacttaagaaaattggatgctagtcccacccttaccttagat 153  Q
    ||||||| |||| |||||||| |||| ||| ||||||||||||||||||||||    
T  42374354 tcagaatcataggcttaagaagattgaatgttagtcccacccttaccttagat 42374302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 132 - 213
Target Start/End: Original strand, 33981 - 34060
Alignment:
Q  132 tagtcccacccttaccttagataatcaaaatcgcagcccttctaggtcctcttcc-cttttcttgacttttctcccttttctc 213  Q
    ||||| |||||||||||||| ||  |||||||||||||  |||||||| ||| || ||| |||||||||||||||||||||||    
T  33981 tagtctcacccttaccttag-tacacaaaatcgcagcc--tctaggtcttctccctcttctcttgacttttctcccttttctc 34060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 101 - 168
Target Start/End: Complemental strand, 1856450 - 1856383
Alignment:
Q  101 tcagaattatagacttaagaaaattggatgctagtcccacccttaccttagataatcaaaatcgcagc 168  Q
    ||||||| |||| |||||||| |||| ||| |||||||||||||||||||||   | |||||||||||    
T  1856450 tcagaatcataggcttaagaagattgaatgttagtcccacccttaccttagaatgtgaaaatcgcagc 1856383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 101 - 152
Target Start/End: Original strand, 13648284 - 13648335
Alignment:
Q  101 tcagaattatagacttaagaaaattggatgctagtcccacccttaccttaga 152  Q
    ||||||| |||| |||||||| |||| ||| |||||||||||||||||||||    
T  13648284 tcagaatcataggcttaagaagattgaatgttagtcccacccttaccttaga 13648335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 101 - 168
Target Start/End: Complemental strand, 13917622 - 13917555
Alignment:
Q  101 tcagaattatagacttaagaaaattggatgctagtcccacccttaccttagataatcaaaatcgcagc 168  Q
    ||||||| |||| |||||||| |||| ||| |||||||||||||||||||||   | |||||||||||    
T  13917622 tcagaatcataggcttaagaagattgaatgttagtcccacccttaccttagaatgtgaaaatcgcagc 13917555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 73 - 210
Target Start/End: Complemental strand, 15007726 - 15007589
Alignment:
Q  73 taatcctacaacttgttaaagctaatcatcagaattataga-cttaagaaaattggatgctagtcccacccttaccttagataatcaaaatcgcagccct 171  Q
    |||||||||| |||||||||   || ||||||||||||| | ||||| | ||||| ||||||||| ||||||||||||||| |||  |||| ||||||      
T  15007726 taatcctaca-cttgttaaatacaaccatcagaattatacaacttaatagaattgaatgctagtctcacccttaccttaga-aattgaaattgcagcctc 15007629  T
Q  172 tctaggtcctcttcccttttctt-gacttttctccctttt 210  Q
    |||||||| ||||| ||| |||| |  |||||||||||||    
T  15007628 tctaggtcttcttctcttctcttagctttttctccctttt 15007589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 56 - 213
Target Start/End: Original strand, 18628419 - 18628576
Alignment:
Q  56 cccaatttctcaaaaactaat-cctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttaccttagata 154  Q
    ||||| ||||||||||||||  |||||||| ||||||| | |||  ||||||| |  |||||||||  |||| ||| || |||||||||||||||| | |    
T  18628419 cccaaattctcaaaaactaaaacctacaacatgttaaatccaattttcagaatcaatgacttaagattattgaatgttattcccacccttaccttata-a 18628517  T
Q  155 atcaaaatcgcagcccttctaggtcctcttcccttttcttgac-ttttctcccttttctc 213  Q
     |||||||||| | | ||||||||| |  |||||| ||||| | ||||||||||||||||    
T  18628518 ctcaaaatcgccg-ctttctaggtctttctcccttctcttggctttttctcccttttctc 18628576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 132 - 213
Target Start/End: Original strand, 12724405 - 12724486
Alignment:
Q  132 tagtcccacccttaccttagataatcaa--aatcgcagcccttctaggtcctcttcc-cttttcttgacttttctcccttttctc 213  Q
    ||||| |||||||||||||  |||||||  ||||||||||||||||||| |||| || ||| ||||| |||||||||||||||||    
T  12724405 tagtctcacccttacctta--taatcaagaaatcgcagcccttctaggt-ctctccctcttctcttggcttttctcccttttctc 12724486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 44 - 150
Target Start/End: Complemental strand, 14317621 - 14317516
Alignment:
Q  44 ttaacctaattccccaatttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccaccct 143  Q
    |||||||||||| | |||| |||||||| ||| |||||||| |||||||   |||  ||||||| ||||||| ||||  |||| ||| ||||| ||||||    
T  14317621 ttaacctaattctcaaatt-ctcaaaaaataaacctacaacatgttaaatacaattttcagaatcatagactcaagattattgaatgttagtctcaccct 14317523  T
Q  144 tacctta 150  Q
    |||||||    
T  14317522 tacctta 14317516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 62 - 179
Target Start/End: Original strand, 16410919 - 16411036
Alignment:
Q  62 ttctcaaaaactaat-cctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttaccttagataatcaaa 160  Q
    ||||||||||||||  |||||||| ||||||| | |||  ||||||| |  |||||||||  |||| ||| ||||||||||||||||||| |  || |||    
T  16410919 ttctcaaaaactaaaacctacaacatgttaaatccaattttcagaatcaatgacttaagattattgaatgttagtcccacccttaccttata-gatgaaa 16411017  T
Q  161 atcgcagcccttctaggtc 179  Q
    |||||||| || |||||||    
T  16411018 atcgcagcactcctaggtc 16411036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 132 - 213
Target Start/End: Complemental strand, 16906432 - 16906351
Alignment:
Q  132 tagtcccacccttaccttagataatcaa--aatcgcagcccttctaggtcctcttcc-cttttcttgacttttctcccttttctc 213  Q
    ||||| |||||||||||||  |||||||  ||||||||||| |||||||| ||| || ||| |||||||||||||||||||||||    
T  16906432 tagtctcacccttacctta--taatcaagaaatcgcagcccctctaggtc-tctccctcttctcttgacttttctcccttttctc 16906351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 101 - 151
Target Start/End: Complemental strand, 19486022 - 19485972
Alignment:
Q  101 tcagaattatagacttaagaaaattggatgctagtcccacccttaccttag 151  Q
    ||||||| |||| |||||||| |||| ||| ||||||||||||||||||||    
T  19486022 tcagaatcataggcttaagaagattgaatgttagtcccacccttaccttag 19485972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 62 - 168
Target Start/End: Complemental strand, 21189013 - 21188907
Alignment:
Q  62 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttaccttagataatcaaaa 161  Q
    |||| ||||||||| |||||||| |||||||   |||  ||||||| ||||||| ||||  |||  ||| |||||||||||||||||| ||  || ||||    
T  21189013 ttctaaaaaactaaacctacaacatgttaaatacaattttcagaatcatagactcaagattattaaatgttagtcccacccttaccttggaatataaaaa 21188914  T
Q  162 tcgcagc 168  Q
    |||||||    
T  21188913 tcgcagc 21188907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 111 - 168
Target Start/End: Complemental strand, 17180568 - 17180512
Alignment:
Q  111 agacttaagaaaattggatgctagtcccacccttaccttagataatcaaaatcgcagc 168  Q
    |||||||| || |||| ||||||||| ||||||||||||| ||| |||||||||||||    
T  17180568 agacttaataagattgaatgctagtctcacccttacctta-atactcaaaatcgcagc 17180512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 101 - 169
Target Start/End: Complemental strand, 25926349 - 25926280
Alignment:
Q  101 tcagaattatagacttaagaaaattggatgctagtcccacccttacc-ttagataatcaaaatcgcagcc 169  Q
    ||||||| |||| |||||||| |||| ||| |||||||||||||||| ||| | ||| ||||||||||||    
T  25926349 tcagaatcataggcttaagaagattgaatgttagtcccacccttacctttaaagaatgaaaatcgcagcc 25926280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 40 - 179
Target Start/End: Original strand, 41526219 - 41526358
Alignment:
Q  40 acttttaacc-taattccccaatttctcaaaaactaat-cctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcc 137  Q
    |||||||||| |||||||| |||| ||||||||||||  |||||||| ||||||| | |||  |||||||    |||||||||  |||| ||| ||||||    
T  41526219 acttttaaccctaattcccaaatt-ctcaaaaactaaaacctacaacatgttaaatccaattttcagaatcgatgacttaagattattgaatgttagtcc 41526317  T
Q  138 cacccttaccttagataatcaaaatcgcagcccttctaggtc 179  Q
    |||||||||| || |  || ||||||||||| ||||||||||    
T  41526318 cacccttaccgtata-gatgaaaatcgcagcacttctaggtc 41526358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 122 - 213
Target Start/End: Complemental strand, 9388946 - 9388856
Alignment:
Q  122 aattggatgctagtcccacccttaccttagataatcaaaatcgcagcccttctaggtcctcttcccttttcttgac-ttttctcccttttctc 213  Q
    ||||| ||||||||| ||||||||||||| | |||  |||||||||| | |||||||| || |||||| ||||| | ||||||||||||||||    
T  9388946 aattgaatgctagtctcacccttacctta-agaattgaaatcgcagctc-tctaggtcttcctcccttctcttggctttttctcccttttctc 9388856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 104 - 213
Target Start/End: Complemental strand, 9750797 - 9750688
Alignment:
Q  104 gaattatagacttaagaaaattggatgctagtcccacccttaccttagataatcaaaatcgcagcccttctaggtcctcttcc-cttttcttgac-tttt 201  Q
    |||||| ||| |||| | ||||| ||| ||||| ||||||||||||| | ||| ||||||||||||  |||||||| ||| || ||| ||||| | ||||    
T  9750797 gaattacagaattaatagaattgtatggtagtctcacccttaccttaaagaatgaaaatcgcagcc--tctaggtcttctccctcttctcttggcttttt 9750700  T
Q  202 ctcccttttctc 213  Q
    ||||||||||||    
T  9750699 ctcccttttctc 9750688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 101 - 153
Target Start/End: Complemental strand, 10500784 - 10500732
Alignment:
Q  101 tcagaattatagacttaagaaaattggatgctagtcccacccttaccttagat 153  Q
    ||||||| ||||||| ||||  |||| ||| ||||||||||||||||||||||    
T  10500784 tcagaatcatagactcaagattattgaatgatagtcccacccttaccttagat 10500732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 101 - 153
Target Start/End: Original strand, 13893449 - 13893501
Alignment:
Q  101 tcagaattatagacttaagaaaattggatgctagtcccacccttaccttagat 153  Q
    ||||||| ||||||||||||  | || ||| ||||||||||||||||||||||    
T  13893449 tcagaatcatagacttaagatcactgaatgatagtcccacccttaccttagat 13893501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 62 - 150
Target Start/End: Complemental strand, 45846853 - 45846765
Alignment:
Q  62 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctta 150  Q
    |||||||||||||| |||||||| |||||||   |||  ||| ||| | ||||| ||||  |||| ||| |||||||||||||||||||    
T  45846853 ttctcaaaaactaaacctacaacatgttaaatacaattttcaaaatcagagactcaagattattgaatgttagtcccacccttacctta 45846765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0586 (Bit Score: 70; Significance: 1e-31; HSPs: 1)
Name: scaffold0586
Description:

Target: scaffold0586; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 138 - 215
Target Start/End: Original strand, 4799 - 4876
Alignment:
Q  138 cacccttaccttagataatcaaaatcgcagcccttctaggtcctcttcccttttcttgacttttctcccttttctctg 215  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  4799 cacccttaccttagataatcgaaatcgcagcccttctaggtcctcttcccttttcttgacttttcttccttttctctg 4876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 70; Significance: 1e-31; HSPs: 49)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 138 - 215
Target Start/End: Complemental strand, 22588949 - 22588872
Alignment:
Q  138 cacccttaccttagataatcaaaatcgcagcccttctaggtcctcttcccttttcttgacttttctcccttttctctg 215  Q
    ||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||    
T  22588949 cacccttaccttagataatcaaaatcgcagcccttcttggttctcttcccttttcttgacttttctcccttttctctg 22588872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 138 - 215
Target Start/End: Original strand, 4398612 - 4398689
Alignment:
Q  138 cacccttaccttagataatcaaaatcgcagcccttctaggtcctcttcccttttcttgacttttctcccttttctctg 215  Q
    |||||||||||||||||||| |||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||    
T  4398612 cacccttaccttagataatcgaaatcgcagcccttcttggtgctcttcccttttcttgacttttctcccttttctctg 4398689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 138 - 215
Target Start/End: Complemental strand, 16255152 - 16255075
Alignment:
Q  138 cacccttaccttagataatcaaaatcgcagcccttctaggtcctcttcccttttcttgacttttctcccttttctctg 215  Q
    |||||||||||||||||||| |||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||    
T  16255152 cacccttaccttagataatcgaaatcgcagcccttcttggttctcttcccttttcttgacttttctcccttttctctg 16255075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 138 - 215
Target Start/End: Complemental strand, 16258785 - 16258708
Alignment:
Q  138 cacccttaccttagataatcaaaatcgcagcccttctaggtcctcttcccttttcttgacttttctcccttttctctg 215  Q
    |||||||||||||||||||| |||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||    
T  16258785 cacccttaccttagataatcgaaatcgcagcccttcttggttctcttcccttttcttgacttttctcccttttctctg 16258708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 138 - 215
Target Start/End: Complemental strand, 22592504 - 22592427
Alignment:
Q  138 cacccttaccttagataatcaaaatcgcagcccttctaggtcctcttcccttttcttgacttttctcccttttctctg 215  Q
    |||||||||||||||||||| |||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||    
T  22592504 cacccttaccttagataatcgaaatcgcagcccttcttggttctcttcccttttcttgacttttctcccttttctctg 22592427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 138 - 215
Target Start/End: Complemental strand, 22596059 - 22595982
Alignment:
Q  138 cacccttaccttagataatcaaaatcgcagcccttctaggtcctcttcccttttcttgacttttctcccttttctctg 215  Q
    |||||||||||||||||||| |||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||    
T  22596059 cacccttaccttagataatcgaaatcgcagcccttcttggttctcttcccttttcttgacttttctcccttttctctg 22595982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 138 - 215
Target Start/End: Original strand, 22881090 - 22881167
Alignment:
Q  138 cacccttaccttagataatcaaaatcgcagcccttctaggtcctcttcccttttcttgacttttctcccttttctctg 215  Q
    |||||||||||||||||||| |||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||    
T  22881090 cacccttaccttagataatcgaaatcgcagcccttcttggttctcttcccttttcttgacttttctcccttttctctg 22881167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 138 - 215
Target Start/End: Complemental strand, 29324437 - 29324360
Alignment:
Q  138 cacccttaccttagataatcaaaatcgcagcccttctaggtcctcttcccttttcttgacttttctcccttttctctg 215  Q
    |||||||||||||||||||| |||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||    
T  29324437 cacccttaccttagataatcgaaatcgcagcccttcttggttctcttcccttttcttgacttttctcccttttctctg 29324360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 138 - 214
Target Start/End: Original strand, 26496788 - 26496864
Alignment:
Q  138 cacccttaccttagataatcaaaatcgcagcccttctaggtcctcttcccttttcttgacttttctcccttttctct 214  Q
    |||||||||||||| ||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  26496788 cacccttaccttaggtaatcgaaatcgcagcccttctaggttctcttcccttttcttgacttttctcccttttctct 26496864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 68 - 213
Target Start/End: Complemental strand, 26739879 - 26739735
Alignment:
Q  68 aaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttaccttagataatcaaaatcgcag 167  Q
    |||||||| ||||||||||||||||  ||||||||||||||| |||||||||| ||||| ||| ||||| |||||||||||||   ||||||||||||||    
T  26739879 aaaactaaacctacaacttgttaaatttaatcatcagaattacagacttaagagaattgaatgttagtctcacccttaccttaacaaatcaaaatcgcag 26739780  T
Q  168 ccct-tctaggtcctcttcccttttcttgacttttctcccttttctc 213  Q
    |  | |||||||  |  |||||| |||| ||||||||||||||||||    
T  26739779 ctttctctaggt--ttctcccttctcttaacttttctcccttttctc 26739735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 73 - 213
Target Start/End: Complemental strand, 22177423 - 22177282
Alignment:
Q  73 taatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctt-agataatcaaaatcgcagccct 171  Q
    |||||||||| |||||||||  ||||||||||||||| |||||||| || |||| ||||||||| |||||||||||| | | |||| |||||||||||      
T  22177423 taatcctaca-cttgttaaatttaatcatcagaattacagacttaataagattgaatgctagtctcacccttaccttaacaaaatcgaaatcgcagcctc 22177325  T
Q  172 tctaggtcctcttcccttttcttgac-ttttctcccttttctc 213  Q
    ||| |||||||||| ||| ||||||| ||||||||||||||||    
T  22177324 tcttggtcctcttctcttctcttgactttttctcccttttctc 22177282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 138 - 215
Target Start/End: Complemental strand, 26360322 - 26360244
Alignment:
Q  138 cacccttaccttagataatcaaaatcgcagcccttctaggtcctcttccc-ttttcttgacttttctcccttttctctg 215  Q
    |||||||||||||||||||| |||||||||||||||| ||| |||||||| |||||||||||||||| |||||||||||    
T  26360322 cacccttaccttagataatcgaaatcgcagcccttcttggttctcttccctttttcttgacttttcttccttttctctg 26360244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 40 - 117
Target Start/End: Original strand, 25744603 - 25744679
Alignment:
Q  40 acttttaacctaattccccaatttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagactta 117  Q
    |||||||||||||||||| ||||||||||||||| ||| |||||||||||||| |||||||||||||||||| |||||    
T  25744603 acttttaacctaattccc-aatttctcaaaaactcatcatacaacttgttaaatctaatcatcagaattatacactta 25744679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 66 - 151
Target Start/End: Original strand, 23470660 - 23470745
Alignment:
Q  66 caaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttaccttag 151  Q
    |||||||||| |||||||| ||||||| |||||||||||||| |||| |||||||| |||| ||| || |||||||||||||||||    
T  23470660 caaaaactaaccctacaacatgttaaatctaatcatcagaatcataggcttaagaagattgaatgttattcccacccttaccttag 23470745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 40 - 213
Target Start/End: Original strand, 20572706 - 20572876
Alignment:
Q  40 acttttaacctaattccccaatttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtccca 139  Q
    ||||||||||||||| || | ||||   |||||||| |||||| | ||||||| |||||||||||||| |||| ||||  ||||||| ||| ||||| ||    
T  20572706 acttttaacctaatttccaactttc---aaaactaaacctaca-catgttaaatctaatcatcagaatcataggcttaccaaaattgaatgttagtctca 20572801  T
Q  140 cccttaccttagataatcaaaatc-gcagcccttctaggtcctcttcccttttcttgacttttctcccttttctc 213  Q
    |||||||||||   |||  ||||| ||||||  ||| ||| |||||| ||| |||||||||||||||||||||||    
T  20572802 cccttaccttaagaaattgaaatcggcagcctctcttggttctcttctcttctcttgacttttctcccttttctc 20572876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 88 - 213
Target Start/End: Complemental strand, 21327485 - 21327360
Alignment:
Q  88 ttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttaccttagataatcaaaatc-gcagccct-tctaggtcctcttc 185  Q
    ||||| ||||||||||||||||||||||||||||||||| ||| ||||| ||| |||||||||   |||| ||||| |||||  | |||||||  || ||    
T  21327485 ttaaatctaatcatcagaattatagacttaagaaaattgaatgttagtctcactcttaccttaacaaatcgaaatcggcagctttctctaggt--tcctc 21327388  T
Q  186 ccttttcttgacttttctcccttttctc 213  Q
    |||| |||||||||||||||||||||||    
T  21327387 ccttctcttgacttttctcccttttctc 21327360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 67 - 151
Target Start/End: Original strand, 23476373 - 23476457
Alignment:
Q  67 aaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttaccttag 151  Q
    ||||||||| |||||||| ||||||| |||||||| ||||| |||| |||||||| |||| ||| ||||||||||||||||||||    
T  23476373 aaaaactaaccctacaacatgttaaatctaatcattagaatcataggcttaagaagattgaatgttagtcccacccttaccttag 23476457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 62 - 146
Target Start/End: Complemental strand, 25573665 - 25573581
Alignment:
Q  62 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttac 146  Q
    |||||||||||||| |||||||| ||||||| |||||||||||||| ||||  ||||||| |||| ||| |||||||||||||||    
T  25573665 ttctcaaaaactaaccctacaacatgttaaatctaatcatcagaatcataggattaagaagattgaatgttagtcccacccttac 25573581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 62 - 145
Target Start/End: Complemental strand, 25576093 - 25576010
Alignment:
Q  62 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccaccctta 145  Q
    |||||||||||||| |||||||| ||||||| ||| |||||||||| |||| |||||||| |||| ||| ||||||||||||||    
T  25576093 ttctcaaaaactaaccctacaacatgttaaatctattcatcagaatcataggcttaagaagattgaatgttagtcccaccctta 25576010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 40 - 150
Target Start/End: Original strand, 14048931 - 14049040
Alignment:
Q  40 acttttaacctaattccccaatttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtccca 139  Q
    |||||||||||||||| ||||||| ||||||||||| |||||||| |||||||   ||| |||||||||| || ||||||| |||||  || || |||||    
T  14048931 acttttaacctaattctccaattt-tcaaaaactaaacctacaacatgttaaatacaattatcagaattacaggcttaagagaattgattgttaatccca 14049029  T
Q  140 cccttacctta 150  Q
    |||||||||||    
T  14049030 cccttacctta 14049040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 62 - 152
Target Start/End: Original strand, 36315409 - 36315498
Alignment:
Q  62 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttaccttaga 152  Q
    ||||| ||||| ||||||||| |||||||||  ||||||||||||||| |||||||| | ||||| ||||||||| |||||||||||||||    
T  36315409 ttctctaaaaccaatcctaca-cttgttaaatttaatcatcagaattacagacttaatagaattgaatgctagtctcacccttaccttaga 36315498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 42 - 152
Target Start/End: Complemental strand, 41094925 - 41094816
Alignment:
Q  42 ttttaacctaattccccaatttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacc 141  Q
    |||||||||||||| |||||| |||||||||||| |||||||| |||||||   ||| |||||||||| || ||||||| |||||  || ||||| ||||    
T  41094925 ttttaacctaattctccaatt-ctcaaaaactaaacctacaacatgttaaatacaattatcagaattacaggcttaagagaattgattgttagtctcacc 41094827  T
Q  142 cttaccttaga 152  Q
    |||||||||||    
T  41094826 cttaccttaga 41094816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 68 - 145
Target Start/End: Complemental strand, 26732066 - 26731989
Alignment:
Q  68 aaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccaccctta 145  Q
    |||||||| ||||||||||||||||  ||||||||||||||| |||||||||| ||||| ||| ||||| ||||||||    
T  26732066 aaaactaaacctacaacttgttaaatttaatcatcagaattacagacttaagagaattgaatgttagtctcaccctta 26731989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 62 - 150
Target Start/End: Original strand, 15797305 - 15797393
Alignment:
Q  62 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctta 150  Q
    ||||||||||||| ||||||||| |||||||   ||  |||||||||| || |||||||||||||  ||||||||||||||||||||||    
T  15797305 ttctcaaaaactagtcctacaacatgttaaatacaactatcagaattagaggcttaagaaaattgagtgctagtcccacccttacctta 15797393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 62 - 145
Target Start/End: Complemental strand, 25574900 - 25574817
Alignment:
Q  62 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccaccctta 145  Q
    |||||||||||||| |||||||| ||||||| ||| |||||||||  |||| |||||||| |||| ||| ||||||||||||||    
T  25574900 ttctcaaaaactaaccctacaacatgttaaatctattcatcagaaccataggcttaagaagattgaatgttagtcccaccctta 25574817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 62 - 213
Target Start/End: Complemental strand, 2154040 - 2153890
Alignment:
Q  62 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttaccttagataatcaaaa 161  Q
    |||||||||||||| |||||||| |||||||   |||  ||||||| ||||||| ||||  |||| ||| ||||||||||||||||||| | ||| ||||    
T  2154040 ttctcaaaaactaaacctacaacatgttaaatacaattttcagaatcatagactcaagattattgaatgttagtcccacccttacctta-acaatgaaaa 2153942  T
Q  162 tcgcagcccttctaggtcctcttcccttttcttgac-ttttctcccttttctc 213  Q
    ||||||| | |||||||  |  |||||| ||||| | ||||||||||||||||    
T  2153941 tcgcagctc-tctaggtgtttctcccttctcttggctttttctcccttttctc 2153890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 69 - 168
Target Start/End: Original strand, 22413056 - 22413154
Alignment:
Q  69 aaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttaccttagataatcaaaatcgcagc 168  Q
    ||||||| ||| |||| ||||||| ||||| |||||||| |||| ||||| || |||| ||| ||||||||||||||||||| | ||| |||||||||||    
T  22413056 aaactaaacctccaacatgttaaatctaattatcagaatcataggcttaaaaagattgaatgttagtcccacccttacctta-acaatgaaaatcgcagc 22413154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 84 - 169
Target Start/End: Complemental strand, 18318250 - 18318166
Alignment:
Q  84 cttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttaccttagataatcaaaatcgcagcc 169  Q
    |||||||||  ||||||||||||||| |||||||| || |||| ||| ||||| ||||||||||||| | | ||||||||||||||    
T  18318250 cttgttaaatttaatcatcagaattacagacttaataagattgaatgttagtctcacccttaccttata-actcaaaatcgcagcc 18318166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 57 - 168
Target Start/End: Original strand, 23065370 - 23065481
Alignment:
Q  57 ccaatttctcaaaaactaat-cctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttaccttagataa 155  Q
    |||||||||||||||||||  |||||||| ||||||| | |||  ||||||| |  |||||||||  |||| ||| ||||||||||||||||||| | |     
T  23065370 ccaatttctcaaaaactaaaacctacaacatgttaaatccaattttcagaatcaatgacttaagattattgaatgttagtcccacccttaccttata-ac 23065468  T
Q  156 tcaaaatcgcagc 168  Q
    |||||||||||||    
T  23065469 tcaaaatcgcagc 23065481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 73 - 168
Target Start/End: Complemental strand, 27988181 - 27988086
Alignment:
Q  73 taatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttaccttag-ataatcaaaatcgcagc 168  Q
    |||||||||| |||||||||  ||| ||||||||||| |||||||| | ||||| ||| ||||| |||||||||||||| | |||| ||||||||||    
T  27988181 taatcctaca-cttgttaaatttaaccatcagaattacagacttaatagaattgaatgttagtctcacccttaccttagaaaaatcgaaatcgcagc 27988086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 62 - 150
Target Start/End: Original strand, 29330727 - 29330815
Alignment:
Q  62 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctta 150  Q
    |||||||||||||| |||||||| |||||||   |||  ||||||| ||||||| ||||  |||| ||| |||||||||||||||||||    
T  29330727 ttctcaaaaactaaacctacaacatgttaaatacaattttcagaatcatagactcaagattattgaatgttagtcccacccttacctta 29330815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 56 - 171
Target Start/End: Complemental strand, 40723555 - 40723440
Alignment:
Q  56 cccaatttctcaaaaacta-atcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttaccttagata 154  Q
    ||||| ||||||||||||| | || ||||| |||||||  |||| |||| ||| |||| |||||||| |||| ||| ||||||||||||||||||| ||     
T  40723555 cccaaattctcaaaaactataaccaacaacatgttaaatttaattatcaaaatcataggcttaagaagattgaatgttagtcccacccttacctta-atc 40723457  T
Q  155 atcaaaatcgcagccct 171  Q
      |||||||||||||||    
T  40723456 cacaaaatcgcagccct 40723440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 56 - 213
Target Start/End: Original strand, 39245989 - 39246146
Alignment:
Q  56 cccaatttctcaaaaactaat-cctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttaccttagata 154  Q
    ||||| ||||||||||||||  |||||||| ||||||| | |||  ||||||| |  |||||||||  |||| ||| ||||||||||||||||||| | |    
T  39245989 cccaaattctcaaaaactaaaacctacaacatgttaaatccaattttcagaatcaatgacttaagattattgaatgttagtcccacccttaccttata-a 39246087  T
Q  155 atcaaaatcgcagcccttctaggtcctcttcccttttcttgac-ttttctcccttttctc 213  Q
     |||||||||| | | ||||||||| |  |||||| ||||| | ||||||||||||||||    
T  39246088 ctcaaaatcgc-ggctttctaggtctttctcccttctcttggctttttctcccttttctc 39246146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 62 - 168
Target Start/End: Complemental strand, 20917255 - 20917149
Alignment:
Q  62 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttaccttagataatcaaaa 161  Q
    |||||||||||||| |||||||| | |||||   |||  ||||||| ||||||| ||||  |||| ||| |||||||||||||||||| ||  || ||||    
T  20917255 ttctcaaaaactaaacctacaacatattaaatacaattttcagaatcatagactcaagattattgaatgttagtcccacccttaccttggaatataaaaa 20917156  T
Q  162 tcgcagc 168  Q
    |||||||    
T  20917155 tcgcagc 20917149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 62 - 151
Target Start/End: Complemental strand, 41860669 - 41860580
Alignment:
Q  62 ttctcaaaaacta-atcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttaccttag 151  Q
    ||||||||||||| | |||||||| | ||||| ||||| |||| ||| |||| |||||||| |||| ||| ||||||||||||||||||||    
T  41860669 ttctcaaaaactataacctacaacat-ttaaatctaattatcaaaatcataggcttaagaagattgaatgttagtcccacccttaccttag 41860580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 62 - 150
Target Start/End: Complemental strand, 17516378 - 17516290
Alignment:
Q  62 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctta 150  Q
    |||||||||| ||| |||||||| |||||||   |||  ||||||| ||||||| ||||  |||| ||| |||||||||||||||||||    
T  17516378 ttctcaaaaaataaacctacaacatgttaaatacaattttcagaatcatagactcaagattattgaatgttagtcccacccttacctta 17516290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 62 - 150
Target Start/End: Original strand, 24473828 - 24473916
Alignment:
Q  62 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctta 150  Q
    |||||||||||||| |||||||| |||||||   |||  ||||||| ||||||| ||||  |||| ||| ||||| |||||||||||||    
T  24473828 ttctcaaaaactaaacctacaacatgttaaatacaattttcagaatcatagactcaagattattgaatgttagtctcacccttacctta 24473916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 132 - 213
Target Start/End: Original strand, 13026163 - 13026244
Alignment:
Q  132 tagtcccacccttaccttagataatcaaaatcgcagcccttctaggtcctcttcccttttcttgac-ttttctcccttttctc 213  Q
    ||||| |||||||||||||||   | ||||||||||||| |||||||| || |||||| ||||| | ||||||||||||||||    
T  13026163 tagtctcacccttaccttagaatgtgaaaatcgcagcccctctaggtcttc-tcccttatcttggctttttctcccttttctc 13026244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 132 - 213
Target Start/End: Original strand, 13096347 - 13096428
Alignment:
Q  132 tagtcccacccttaccttagataatcaaaatcgcagcccttctaggtcctcttcccttttcttgac-ttttctcccttttctc 213  Q
    ||||| |||||||||||||||   | ||||||||||||| |||||||| || |||||| ||||| | ||||||||||||||||    
T  13096347 tagtctcacccttaccttagaatgtgaaaatcgcagcccctctaggtcttc-tcccttatcttggctttttctcccttttctc 13096428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 84 - 150
Target Start/End: Complemental strand, 20765296 - 20765230
Alignment:
Q  84 cttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctta 150  Q
    |||||||||  ||||||||||||||| |||||||| || |||| ||  ||||| |||||||||||||    
T  20765296 cttgttaaatttaatcatcagaattacagacttaataagattgaattttagtctcacccttacctta 20765230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 40 - 169
Target Start/End: Original strand, 31062187 - 31062312
Alignment:
Q  40 acttttaacctaattccccaatttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtccca 139  Q
    ||||||||||||||||  ||| ||||| ||||||||  || |||| ||||||| ||||| |||||||| |||| |||||||| |||| ||| ||  | ||    
T  31062187 acttttaacctaattcttcaa-ttctc-aaaactaaatctccaacatgttaaatctaattatcagaatcataggcttaagaagattgaatgtta--ctca 31062282  T
Q  140 cccttaccttagataatcaaaatcgcagcc 169  Q
    |||||||||||||  |  ||||||||||||    
T  31062283 cccttaccttagaataagaaaatcgcagcc 31062312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 96 - 213
Target Start/End: Complemental strand, 20026127 - 20026010
Alignment:
Q  96 aatcatcagaat--tatagacttaagaaaattggatgctagtcccacccttaccttagataatcaaaatcgcagcccttctaggtcctcttcccttttct 193  Q
    ||||||||||||  |||||| |||| | ||||| ||||||||| ||||||||||||||  ||| ||||||||||| | |  ||||||||||| ||| |||    
T  20026127 aatcatcagaatcatataga-ttaatagaattgaatgctagtctcacccttaccttag-caatgaaaatcgcagctc-taaaggtcctcttctcttctct 20026031  T
Q  194 tgac-ttttctcccttttctc 213  Q
    || | ||||||||||||||||    
T  20026030 tggctttttctcccttttctc 20026010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 122 - 179
Target Start/End: Complemental strand, 21870830 - 21870773
Alignment:
Q  122 aattggatgctagtcccacccttaccttagataatcaaaatcgcagcccttctaggtc 179  Q
    ||||| ||||||||| ||||||||||||  || || ||||||||||||| ||||||||    
T  21870830 aattgaatgctagtctcacccttaccttgtatgatgaaaatcgcagcccctctaggtc 21870773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 122 - 179
Target Start/End: Complemental strand, 21875110 - 21875053
Alignment:
Q  122 aattggatgctagtcccacccttaccttagataatcaaaatcgcagcccttctaggtc 179  Q
    ||||| ||||||||| ||||||||||||  || || ||||||||||||| ||||||||    
T  21875110 aattgaatgctagtctcacccttaccttgtatgatgaaaatcgcagcccctctaggtc 21875053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 40 - 179
Target Start/End: Original strand, 29346818 - 29346957
Alignment:
Q  40 acttttaacc-taattccccaatttctcaaaaactaat-cctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcc 137  Q
    |||||||||| |||||||| |||| ||||||||| ||  |||||||| ||||||| | |||  ||||||| |  |||||||||  |||| ||| ||||||    
T  29346818 acttttaaccctaattcccaaatt-ctcaaaaacgaaaacctacaacatgttaaatccaattttcagaatcaatgacttaagattattgaatgttagtcc 29346916  T
Q  138 cacccttaccttagataatcaaaatcgcagcccttctaggtc 179  Q
    ||||||||||||| |  || ||||||||||| || |||||||    
T  29346917 cacccttaccttata-gatgaaaatcgcagcactcctaggtc 29346957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 40 - 179
Target Start/End: Original strand, 29349291 - 29349430
Alignment:
Q  40 acttttaacc-taattccccaatttctcaaaaactaat-cctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcc 137  Q
    |||||||||| |||||||| |||| ||||||||| ||  |||||||| ||||||| | |||  ||||||| |  |||||||||  |||| ||| ||||||    
T  29349291 acttttaaccctaattcccaaatt-ctcaaaaacgaaaacctacaacatgttaaatccaattttcagaatcaatgacttaagattattgaatgttagtcc 29349389  T
Q  138 cacccttaccttagataatcaaaatcgcagcccttctaggtc 179  Q
    ||||||||||||| |  || ||||||||||| || |||||||    
T  29349390 cacccttaccttata-gatgaaaatcgcagcactcctaggtc 29349430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 40 - 179
Target Start/End: Original strand, 29351764 - 29351903
Alignment:
Q  40 acttttaacc-taattccccaatttctcaaaaactaat-cctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcc 137  Q
    |||||||||| |||||||| |||| ||||||||| ||  |||||||| ||||||| | |||  ||||||| |  |||||||||  |||| ||| ||||||    
T  29351764 acttttaaccctaattcccaaatt-ctcaaaaacgaaaacctacaacatgttaaatccaattttcagaatcaatgacttaagattattgaatgttagtcc 29351862  T
Q  138 cacccttaccttagataatcaaaatcgcagcccttctaggtc 179  Q
    ||||||||||||| |  || ||||||||||| || |||||||    
T  29351863 cacccttaccttata-gatgaaaatcgcagcactcctaggtc 29351903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 101 - 150
Target Start/End: Original strand, 40726683 - 40726732
Alignment:
Q  101 tcagaattatagacttaagaaaattggatgctagtcccacccttacctta 150  Q
    ||||||| |||| |||||||| |||| ||| |||||||||||||||||||    
T  40726683 tcagaatcataggcttaagaagattgaatgttagtcccacccttacctta 40726732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 101 - 153
Target Start/End: Original strand, 18419454 - 18419506
Alignment:
Q  101 tcagaattatagacttaagaaaattggatgctagtcccacccttaccttagat 153  Q
    ||||||| |||| |||||||| |||| ||| |||||||||| |||||||||||    
T  18419454 tcagaatcataggcttaagaagattgaatgttagtcccacctttaccttagat 18419506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 70; Significance: 1e-31; HSPs: 49)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 138 - 215
Target Start/End: Original strand, 41792575 - 41792652
Alignment:
Q  138 cacccttaccttagataatcaaaatcgcagcccttctaggtcctcttcccttttcttgacttttctcccttttctctg 215  Q
    |||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41792575 cacccttaccttaggtaatcgaaatcgcagcccttctaggtcctcttcccttttcttgacttttctcccttttctctg 41792652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 138 - 215
Target Start/End: Original strand, 287995 - 288072
Alignment:
Q  138 cacccttaccttagataatcaaaatcgcagcccttctaggtcctcttcccttttcttgacttttctcccttttctctg 215  Q
    |||||||||||||||||||| |||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||    
T  287995 cacccttaccttagataatcgaaatcgcagcccttcttggttctcttcccttttcttgacttttctcccttttctctg 288072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 138 - 215
Target Start/End: Complemental strand, 1101777 - 1101700
Alignment:
Q  138 cacccttaccttagataatcaaaatcgcagcccttctaggtcctcttcccttttcttgacttttctcccttttctctg 215  Q
    ||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  1101777 cacccttaccttaaataatcgaaatcgcagcccttctaggtcctcttcccttttcttgacttttctccctcttctctg 1101700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 138 - 215
Target Start/End: Complemental strand, 13043781 - 13043704
Alignment:
Q  138 cacccttaccttagataatcaaaatcgcagcccttctaggtcctcttcccttttcttgacttttctcccttttctctg 215  Q
    |||||||||||||||||||  ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  13043781 cacccttaccttagataattgaaatcgcagcccttctaggtcctcttcccttttcttgtcttttctcccttttctctg 13043704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 138 - 215
Target Start/End: Complemental strand, 15279312 - 15279235
Alignment:
Q  138 cacccttaccttagataatcaaaatcgcagcccttctaggtcctcttcccttttcttgacttttctcccttttctctg 215  Q
    |||||||||||||||||||| |||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||    
T  15279312 cacccttaccttagataatcgaaatcgcagcccttcttggttctcttcccttttcttgacttttctcccttttctctg 15279235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 138 - 215
Target Start/End: Complemental strand, 47126040 - 47125963
Alignment:
Q  138 cacccttaccttagataatcaaaatcgcagcccttctaggtcctcttcccttttcttgacttttctcccttttctctg 215  Q
    |||||||||||||||||||| |||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||    
T  47126040 cacccttaccttagataatcgaaatcgcagcccttcttggttctcttcccttttcttgacttttctcccttttctctg 47125963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 62 - 150
Target Start/End: Original strand, 15792658 - 15792746
Alignment:
Q  62 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctta 150  Q
    ||||||||||||||||||||||| ||||||| |||||||||||||| |||| ||||||||||||| ||| |||||||||||||||||||    
T  15792658 ttctcaaaaactaatcctacaacatgttaaatctaatcatcagaatcataggcttaagaaaattgaatgttagtcccacccttacctta 15792746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 40 - 213
Target Start/End: Original strand, 26790200 - 26790368
Alignment:
Q  40 acttttaacctaattccccaatttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtccca 139  Q
    ||||||||||||||| |  || |||||||||||||| |||||| | ||||||| |||||||||| ||| |||||||||||||||||| ||| ||||| ||    
T  26790200 acttttaacctaatttc--aaattctcaaaaactaaacctaca-catgttaaatctaatcatcaaaatcatagacttaagaaaattgaatgttagtctca 26790296  T
Q  140 cccttacctta-gataatcaaaatc-gcagcccttctaggtcctcttcccttttcttgacttttctcccttttctc 213  Q
    ||||||||||| |||  |||||||| ||||||  ||| |||  ||||||||| |||||||||||||||||||||||    
T  26790297 cccttaccttatgat--tcaaaatcggcagcctctcttggt--tcttcccttctcttgacttttctcccttttctc 26790368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 138 - 211
Target Start/End: Complemental strand, 55501963 - 55501890
Alignment:
Q  138 cacccttaccttagataatcaaaatcgcagcccttctaggtcctcttcccttttcttgacttttctcccttttc 211  Q
    |||||||||||||||||||| |||||||||||||||| ||| ||||||||||||||||||||||||||||||||    
T  55501963 cacccttaccttagataatcgaaatcgcagcccttcttggttctcttcccttttcttgacttttctcccttttc 55501890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 62 - 151
Target Start/End: Complemental strand, 26049708 - 26049619
Alignment:
Q  62 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttaccttag 151  Q
    |||||||||||||| |||||||| ||||||| |||||||||| ||| |||| |||||||| |||| ||| ||||||||||||||||||||    
T  26049708 ttctcaaaaactaaccctacaacatgttaaatctaatcatcataatcataggcttaagaagattgaatgttagtcccacccttaccttag 26049619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 138 - 215
Target Start/End: Original strand, 27028786 - 27028863
Alignment:
Q  138 cacccttaccttagataatcaaaatcgcagcccttctaggtcctcttcccttttcttgacttttctcccttttctctg 215  Q
    |||||||||||||| ||| | || ||||||||| ||| ||||||||||||||||||||||||||||||||||||||||    
T  27028786 cacccttaccttagttaaccgaagtcgcagcccctcttggtcctcttcccttttcttgacttttctcccttttctctg 27028863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 62 - 150
Target Start/End: Complemental strand, 14852112 - 14852024
Alignment:
Q  62 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctta 150  Q
    |||| ||||||||| |||||||||||||||| |||||||||||||||| || |||||||| |||| ||| |||||| ||||||||||||    
T  14852112 ttctaaaaaactaaccctacaacttgttaaatctaatcatcagaattaaaggcttaagaagattgaatgttagtccaacccttacctta 14852024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 62 - 150
Target Start/End: Complemental strand, 32306240 - 32306152
Alignment:
Q  62 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctta 150  Q
    |||||||||||||| |||||||| ||||||| |||||||||| ||| |||| |||||||| |||| ||| |||||||||||||||||||    
T  32306240 ttctcaaaaactaaccctacaacatgttaaatctaatcatcaaaatcataggcttaagaagattgaatgttagtcccacccttacctta 32306152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 138 - 204
Target Start/End: Original strand, 14699618 - 14699684
Alignment:
Q  138 cacccttaccttagataatcaaaatcgcagcccttctaggtcctcttcccttttcttgacttttctc 204  Q
    |||||||||||||||||||| |||||||||||||||| ||| ||||||||||||||||||| |||||    
T  14699618 cacccttaccttagataatcgaaatcgcagcccttcttggttctcttcccttttcttgactcttctc 14699684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 83 - 169
Target Start/End: Complemental strand, 53081370 - 53081284
Alignment:
Q  83 acttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttaccttagataatcaaaatcgcagcc 169  Q
    ||||||||||  ||||||||||||||| |||||||| || |||| ||||||||| ||||||||||||||| |||| |||||||||||    
T  53081370 acttgttaaatttaatcatcagaattacagacttaataagattgaatgctagtctcacccttaccttagaaaatcgaaatcgcagcc 53081284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 40 - 150
Target Start/End: Original strand, 12841508 - 12841616
Alignment:
Q  40 acttttaacctaattccccaatttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtccca 139  Q
    |||||||||||||||| |||||| ||||||| |||| ||| |||| ||||||| ||||| |||||||| || | |||||||| |||| ||| ||||||||    
T  12841508 acttttaacctaattctccaatt-ctcaaaa-ctaaacctccaacatgttaaatctaattatcagaatcatgggcttaagaagattgaatgttagtccca 12841605  T
Q  140 cccttacctta 150  Q
    |||||||||||    
T  12841606 cccttacctta 12841616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 69 - 150
Target Start/End: Original strand, 14825984 - 14826062
Alignment:
Q  69 aaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctta 150  Q
    |||||||||||||||||||||||| |||   |||||||| |||||||||| |||||||  || ||||| |||||||||||||    
T  14825984 aaactaatcctacaacttgttaaatcta---atcagaatcatagacttaaaaaaattgagtgttagtctcacccttacctta 14826062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 62 - 152
Target Start/End: Original strand, 363127 - 363217
Alignment:
Q  62 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttaccttaga 152  Q
    |||||||||||||| |||||||| |||||||   |||  ||||||| ||||||| ||||  |||| ||| |||||||||||||||||||||    
T  363127 ttctcaaaaactaaacctacaacatgttaaatacaattttcagaatcatagactcaagattattgaatgttagtcccacccttaccttaga 363217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 56 - 150
Target Start/End: Complemental strand, 19617489 - 19617395
Alignment:
Q  56 cccaatttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctta 150  Q
    ||||| |||||||||||||| |||||||| |||||||   |||  ||||||| ||||||| ||||  |||| ||| |||||||||||||||||||    
T  19617489 cccaaattctcaaaaactaaacctacaacatgttaaatacaattttcagaatcatagactcaagattattgaatgttagtcccacccttacctta 19617395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 62 - 168
Target Start/End: Original strand, 52313508 - 52313614
Alignment:
Q  62 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttaccttagataatcaaaa 161  Q
    |||||||||||||| |||||||| | |||||   |||  ||||||| ||||||||||||  |||| ||| |||||||||||||||||| ||  || ||||    
T  52313508 ttctcaaaaactaaacctacaacatattaaatacaattttcagaatcatagacttaagattattgaatgttagtcccacccttaccttggaatataaaaa 52313607  T
Q  162 tcgcagc 168  Q
    |||||||    
T  52313608 tcgcagc 52313614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 69 - 150
Target Start/End: Original strand, 12611880 - 12611961
Alignment:
Q  69 aaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctta 150  Q
    ||||||| ||| |||| ||||||| ||||| |||||||| |||| |||||||| |||| ||| ||||| |||||||||||||    
T  12611880 aaactaaacctccaacatgttaaatctaattatcagaatcataggcttaagaagattgaatgttagtctcacccttacctta 12611961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 69 - 150
Target Start/End: Complemental strand, 23802487 - 23802406
Alignment:
Q  69 aaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctta 150  Q
    ||||||| ||| |||| ||||||| ||||| |||||||| |||| |||||||| |||| ||| ||||| |||||||||||||    
T  23802487 aaactaaacctccaacatgttaaatctaattatcagaatcataggcttaagaagattgaatgttagtctcacccttacctta 23802406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 40 - 179
Target Start/End: Complemental strand, 12033096 - 12032957
Alignment:
Q  40 acttttaacctaattccccaatttctcaaaaactaat-cctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtccc 138  Q
    ||||||||||| | | ||||| ||||||||||||||  |||||||| ||||||| | |||  ||||||| |  |||||||||  |||| ||| |||||||    
T  12033096 acttttaaccttaattcccaaattctcaaaaactaaaacctacaacatgttaaatccaattttcagaatcaatgacttaagattattgaatgttagtccc 12032997  T
Q  139 acccttaccttagataatcaaaatcgcagcccttctaggtc 179  Q
    |||||||||||| |  || ||||||||||| || |||||||    
T  12032996 acccttaccttata-gatgaaaatcgcagcactcctaggtc 12032957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 62 - 150
Target Start/End: Complemental strand, 15489557 - 15489469
Alignment:
Q  62 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctta 150  Q
    |||||||||||||| |||||||| |||||||   |||  ||||||||||||||| ||||  |||| ||| || ||||||||||||||||    
T  15489557 ttctcaaaaactaaacctacaacatgttaaatacaattttcagaattatagactcaagattattgaatgttattcccacccttacctta 15489469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 86 - 150
Target Start/End: Original strand, 17334185 - 17334249
Alignment:
Q  86 tgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctta 150  Q
    ||||||| |||||||||||||||||   ||||||| ||||| ||||||||| |||||||||||||    
T  17334185 tgttaaatctaatcatcagaattatcagcttaagagaattgaatgctagtctcacccttacctta 17334249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 69 - 168
Target Start/End: Complemental strand, 51463111 - 51463012
Alignment:
Q  69 aaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttaccttagataatcaaaatcgcagc 168  Q
    ||||||| ||| |||| ||||||| ||||| |||| ||| |||| |||||||| |||| ||| ||||| |||||||||||| ||  || |||||||||||    
T  51463111 aaactaaacctccaacatgttaaatctaattatcaaaatcataggcttaagaagattgaatgttagtctcacccttaccttggaatataaaaatcgcagc 51463012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 96 - 213
Target Start/End: Original strand, 15372039 - 15372155
Alignment:
Q  96 aatcatcagaattatagac-ttaagaaaattggatgctagtcccacccttaccttagataatcaaaatcgcagcccttctaggtcctcttcccttttctt 194  Q
    |||||||||||||||| |  |||| | ||||| ||||| ||| |||||||||||||||  |  ||||||||||| || ||||||| ||| ||||| ||||    
T  15372039 aatcatcagaattatatagattaatagaattgaatgctggtctcacccttaccttagaataagaaaatcgcagcact-ctaggtcttct-cccttctctt 15372136  T
Q  195 gacttttctcccttttctc 213  Q
    | |||||||||||||||||    
T  15372137 ggcttttctcccttttctc 15372155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 84 - 150
Target Start/End: Complemental strand, 54797952 - 54797886
Alignment:
Q  84 cttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctta 150  Q
    |||||||||  ||||||||||||||| |||||||| || |||| ||| ||||| |||||||||||||    
T  54797952 cttgttaaatttaatcatcagaattacagacttaataagattgaatgttagtctcacccttacctta 54797886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 40 - 179
Target Start/End: Complemental strand, 15117677 - 15117538
Alignment:
Q  40 acttttaacc-taattccccaatttctcaaaaactaat-cctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcc 137  Q
    |||||||||| |||||||| |||| ||||||||||||  |||||||| ||||||| | |||  ||||||| |  |||||||||  |||| ||| ||||||    
T  15117677 acttttaaccctaattcccaaatt-ctcaaaaactaaaacctacaacatgttaaatccaattttcagaatcaatgacttaagattattgaatgttagtcc 15117579  T
Q  138 cacccttaccttagataatcaaaatcgcagcccttctaggtc 179  Q
    ||||||||||||| |  || ||||||||||| || |||||||    
T  15117578 cacccttaccttata-gatgaaaatcgcagcactcctaggtc 15117538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 128 - 177
Target Start/End: Complemental strand, 39705509 - 39705461
Alignment:
Q  128 atgctagtcccacccttaccttagataatcaaaatcgcagcccttctagg 177  Q
    ||||||||| ||||||||||||| ||||||||||||||||| ||||||||    
T  39705509 atgctagtctcacccttacctta-ataatcaaaatcgcagctcttctagg 39705461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 40 - 179
Target Start/End: Complemental strand, 1836843 - 1836706
Alignment:
Q  40 acttttaacc-taattccccaatttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtccc 138  Q
    |||||||||| |||||||| |||| |||||||||||  ||||||||| ||||||   |||  ||||||| ||||||| ||||  |||| ||| |||||||    
T  1836843 acttttaaccctaattcccaaatt-ctcaaaaactatacctacaact-gttaaatacaattttcagaatgatagactcaagattattgaatgttagtccc 1836746  T
Q  139 acccttaccttagataatcaaaatcgcagcccttctaggtc 179  Q
    |||||||||||| |  || ||||||||||| || |||||||    
T  1836745 acccttaccttata-gatgaaaatcgcagcactcctaggtc 1836706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 65 - 153
Target Start/End: Original strand, 3515764 - 3515852
Alignment:
Q  65 tcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttaccttagat 153  Q
    ||||||||||| |||||||| |||||||   |||  ||||||| ||||||| ||||  |||| ||| ||||| ||||||||||||||||    
T  3515764 tcaaaaactaaacctacaacatgttaaatacaattttcagaatcatagactcaagattattgaatgttagtctcacccttaccttagat 3515852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 40 - 179
Target Start/End: Complemental strand, 7640511 - 7640372
Alignment:
Q  40 acttttaacctaattccccaatttctcaaaaactaat-cctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtccc 138  Q
    ||||||||||| | | ||||| ||||||||||||||  |||||||| |||||||   |||  ||||||| ||||||| ||||  |||| ||| ||||| |    
T  7640511 acttttaaccttaattcccaaattctcaaaaactaaaacctacaacatgttaaatacaattttcagaatcatagactcaagattattgaatgttagtctc 7640412  T
Q  139 acccttaccttagataatcaaaatcgcagcccttctaggtc 179  Q
    |||||||||||| |  || ||||||||||| || |||||||    
T  7640411 acccttaccttata-gatgaaaatcgcagcactcctaggtc 7640372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 62 - 213
Target Start/End: Complemental strand, 18214612 - 18214462
Alignment:
Q  62 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttaccttagataatcaaaa 161  Q
    |||||||||||||| |||||||| |||||||   |||   |||||| ||||||| ||||  |||| ||| ||||||||| ||||||||| | | ||||||    
T  18214612 ttctcaaaaactaaacctacaacatgttaaatacaatttgcagaatcatagactcaagattattgaatgttagtcccacgcttaccttata-actcaaaa 18214514  T
Q  162 tcgcagcccttctaggtcctcttcccttttctt-gacttttctcccttttctc 213  Q
    |||| | | ||||||||| |  |||||| |||| | |||||||||||||||||    
T  18214513 tcgccg-ctttctaggtctttctcccttctcttggccttttctcccttttctc 18214462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 40 - 179
Target Start/End: Original strand, 29268193 - 29268332
Alignment:
Q  40 acttttaacctaattccccaatttctcaaaaactaat-cctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtccc 138  Q
    ||||||||||| | | ||||| | ||||||||||||  |||||||| ||||||| | |||  ||||||| |  |||||||||  |||| ||| |||||||    
T  29268193 acttttaaccttaattcccaaatactcaaaaactaaaacctacaacatgttaaatccaattttcagaatcaatgacttaagattattgaatgttagtccc 29268292  T
Q  139 acccttaccttagataatcaaaatcgcagcccttctaggtc 179  Q
    |||||||||||| |  || ||||||||||| || |||||||    
T  29268293 acccttaccttata-gatgaaaatcgcagcactcctaggtc 29268332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 62 - 150
Target Start/End: Complemental strand, 52872490 - 52872402
Alignment:
Q  62 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctta 150  Q
    |||||||||||||| |||||||| |||||||   |||  ||||||| ||||||| ||||  |||| ||| || ||||||||||||||||    
T  52872490 ttctcaaaaactaaacctacaacatgttaaatacaattttcagaatcatagactcaagattattgaatgttaatcccacccttacctta 52872402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 96 - 213
Target Start/End: Complemental strand, 11078 - 10961
Alignment:
Q  96 aatcatcagaattatagac-ttaagaaaattggatgctagtcccacccttaccttagataatcaaaatcgcagcccttctaggtcctcttcccttttctt 194  Q
    |||||||||||||||| |  |||| | ||||| ||||||||| ||||||||||||||  ||| ||||||||||| | |  ||||||||||| ||| ||||    
T  11078 aatcatcagaattatatagattaatacaattgaatgctagtctcacccttaccttag-caatgaaaatcgcagctc-taaaggtcctcttctcttctctt 10981  T
Q  195 gac-ttttctcccttttctc 213  Q
    | | ||||||||||||||||    
T  10980 ggctttttctcccttttctc 10961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 40 - 151
Target Start/End: Original strand, 14651567 - 14651677
Alignment:
Q  40 acttttaacctaattccccaatttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtccca 139  Q
    ||||||||||||||| ||||| ||||||| |||||| | |||||| ||||||||  |||  ||||||| |||| |||||||  | || |||  |||||||    
T  14651567 acttttaacctaatt-cccaaattctcaagaactaaacatacaacatgttaaagacaattttcagaataatagtcttaagattaatgaatgtaagtccca 14651665  T
Q  140 cccttaccttag 151  Q
    ||||||| ||||    
T  14651666 cccttacgttag 14651677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 62 - 152
Target Start/End: Original strand, 19243562 - 19243653
Alignment:
Q  62 ttctcaaaaactaat-cctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttaccttaga 152  Q
    ||||||||||||||  |||||||| ||||||| | |||  ||||||| |  |||||||||  |||| ||| |||||||||||||||||||||    
T  19243562 ttctcaaaaactaaaacctacaacatgttaaatccaattttcagaatcaatgacttaagattattgaatgttagtcccacccttaccttaga 19243653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 62 - 168
Target Start/End: Complemental strand, 11856 - 11750
Alignment:
Q  62 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttaccttagataatcaaaa 161  Q
    |||||||||||||| |||||||| | |||||   |||  ||||||| ||||||| ||||  |||| ||| |||||||||||||| ||| ||  || ||||    
T  11856 ttctcaaaaactaaacctacaacatattaaatacaattttcagaatcatagactcaagattattgaatgttagtcccacccttatcttggaatataaaaa 11757  T
Q  162 tcgcagc 168  Q
    |||||||    
T  11756 tcgcagc 11750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 132 - 213
Target Start/End: Original strand, 12903646 - 12903727
Alignment:
Q  132 tagtcccacccttaccttagataatcaaaatcgcagcccttctaggtcctcttcccttttcttgac-ttttctcccttttctc 213  Q
    ||||| |||||||||||||||  || |||||||||||  | ||||||| || |||||| ||||||| ||||||||||||||||    
T  12903646 tagtctcacccttaccttagaatatgaaaatcgcagctttcctaggtcttc-tcccttctcttgactttttctcccttttctc 12903727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 132 - 213
Target Start/End: Complemental strand, 16239262 - 16239181
Alignment:
Q  132 tagtcccacccttaccttagataatcaaaatcgcagcccttctaggtcctcttcccttttcttgac-ttttctcccttttctc 213  Q
    ||||| ||||||||||||| |  || ||||||||||||| |||||||| || |||||| ||||| | ||||||||||||||||    
T  16239262 tagtctcacccttaccttataggatgaaaatcgcagcccctctaggtcttc-tcccttctcttggctttttctcccttttctc 16239181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 62 - 146
Target Start/End: Original strand, 3485828 - 3485913
Alignment:
Q  62 ttctcaaaaactaat-cctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttac 146  Q
    ||||||||||||||  |||||||| ||||||| | |||  ||||||| ||||||||||||  |||| ||| ||||| |||||||||    
T  3485828 ttctcaaaaactaaaacctacaacatgttaaatccaattttcagaatcatagacttaagattattgaatgttagtctcacccttac 3485913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 84 - 201
Target Start/End: Original strand, 14281254 - 14281369
Alignment:
Q  84 cttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttaccttagataatcaaaatcgcagcccttctaggtcctct 183  Q
    |||||||||  ||||||||||||||| | |||||| || |||| ||| ||||| |||||||||| || |  ||  |||||||||||| |||||||| ||     
T  14281254 cttgttaaatttaatcatcagaattacatacttaataagattgaatgttagtctcacccttaccatataagat-gaaatcgcagcccctctaggtcttc- 14281351  T
Q  184 tcccttttcttgactttt 201  Q
    |||||| ||||| |||||    
T  14281352 tcccttctcttggctttt 14281369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 62 - 150
Target Start/End: Complemental strand, 15354935 - 15354846
Alignment:
Q  62 ttctcaaaaactaatcctacaacttgttaaagctaa-tcatcagaattatagacttaagaaaattggatgctagtcccacccttacctta 150  Q
    |||||||||||||| |||||||| |||||||   || | |||||||| ||||||| ||||  |||| ||| |||| ||||||||||||||    
T  15354935 ttctcaaaaactaaacctacaacatgttaaaataaaattatcagaatcatagactcaagattattgaatgttagttccacccttacctta 15354846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 64 - 157
Target Start/End: Original strand, 16043924 - 16044017
Alignment:
Q  64 ctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttaccttagataatc 157  Q
    ||||||||||||||||| ||| |||||||   |||  ||||||  ||||||||||||  | || ||| ||||| ||||||||||||||| ||||    
T  16043924 ctcaaaaactaatcctataacatgttaaatacaattttcagaaccatagacttaagattactgcatgttagtctcacccttaccttagaaaatc 16044017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 101 - 150
Target Start/End: Original strand, 22354671 - 22354720
Alignment:
Q  101 tcagaattatagacttaagaaaattggatgctagtcccacccttacctta 150  Q
    ||||||| |||| |||||||| |||| ||| |||||||||||||||||||    
T  22354671 tcagaatcataggcttaagaagattgaatgttagtcccacccttacctta 22354720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 62 - 213
Target Start/End: Complemental strand, 14970115 - 14969965
Alignment:
Q  62 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttaccttagataatcaaaa 161  Q
    |||||||||||||| |||| ||| |||||||   |||  ||||||| | ||||| ||||  |||| ||| ||||| ||||||||||||| | ||| ||||    
T  14970115 ttctcaaaaactaaacctataacatgttaaatacaattttcagaatcacagactcaagattattgaatgttagtctcacccttacctta-acaatgaaaa 14970017  T
Q  162 tcgcagcccttctaggtcctcttcccttttcttgac-ttttctcccttttctc 213  Q
    |||||| | ||||||||  |  |||||| ||||| | ||||||||||||||||    
T  14970016 tcgcag-ctttctaggttgttctcccttctcttggctttttctcccttttctc 14969965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 132 - 213
Target Start/End: Complemental strand, 43255392 - 43255311
Alignment:
Q  132 tagtcccacccttaccttagataatcaaaatcgcagcccttctaggtcctcttcc-cttttcttgac-ttttctcccttttctc 213  Q
    ||||| ||||||||||||| | ||| ||||||||||||  |||||||||||| || ||| ||||| | ||||||||||||||||    
T  43255392 tagtctcacccttaccttaaagaatgaaaatcgcagcc--tctaggtcctctccctcttctcttggctttttctcccttttctc 43255311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 70; Significance: 1e-31; HSPs: 53)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 62 - 213
Target Start/End: Original strand, 21683860 - 21684012
Alignment:
Q  62 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttaccttagataatc-aaa 160  Q
    |||||||||||||| ||||||| |||||||| |||| |||||||||||||||||||||||||||| ||| ||||| |||||||||||||   |||| |||    
T  21683860 ttctcaaaaactaaccctacaagttgttaaatctaaccatcagaattatagacttaagaaaattgaatgttagtctcacccttaccttaacaaatcgaaa 21683959  T
Q  161 atcgcagccct-tctaggtcctcttcccttttcttgacttttctcccttttctc 213  Q
    ||||||||  | ||||||| |||||| ||| ||||||||||||||| |||||||    
T  21683960 atcgcagctttctctaggt-ctcttctcttctcttgacttttctcctttttctc 21684012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 138 - 215
Target Start/End: Complemental strand, 14431569 - 14431492
Alignment:
Q  138 cacccttaccttagataatcaaaatcgcagcccttctaggtcctcttcccttttcttgacttttctcccttttctctg 215  Q
    |||||||||||||||||||| |||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||    
T  14431569 cacccttaccttagataatcgaaatcgcagcccttcttggttctcttcccttttcttgacttttctcccttttctctg 14431492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 138 - 215
Target Start/End: Original strand, 20632221 - 20632298
Alignment:
Q  138 cacccttaccttagataatcaaaatcgcagcccttctaggtcctcttcccttttcttgacttttctcccttttctctg 215  Q
    |||||||||||||||||||| |||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||    
T  20632221 cacccttaccttagataatcgaaatcgcagcccttcttggttctcttcccttttcttgacttttctcccttttctctg 20632298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 138 - 215
Target Start/End: Complemental strand, 22899470 - 22899393
Alignment:
Q  138 cacccttaccttagataatcaaaatcgcagcccttctaggtcctcttcccttttcttgacttttctcccttttctctg 215  Q
    |||||||||||||||||||| |||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||    
T  22899470 cacccttaccttagataatcgaaatcgcagcccttcttggttctcttcccttttcttgacttttctcccttttctctg 22899393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 138 - 215
Target Start/End: Original strand, 36182480 - 36182557
Alignment:
Q  138 cacccttaccttagataatcaaaatcgcagcccttctaggtcctcttcccttttcttgacttttctcccttttctctg 215  Q
    |||||||||||||||||||| |||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||    
T  36182480 cacccttaccttagataatcgaaatcgcagcccttcttggttctcttcccttttcttgacttttctcccttttctctg 36182557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 138 - 215
Target Start/End: Original strand, 37359373 - 37359450
Alignment:
Q  138 cacccttaccttagataatcaaaatcgcagcccttctaggtcctcttcccttttcttgacttttctcccttttctctg 215  Q
    |||||||||||||||||||| |||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||    
T  37359373 cacccttaccttagataatcgaaatcgcagcccttcttggttctcttcccttttcttgacttttctcccttttctctg 37359450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 138 - 215
Target Start/End: Original strand, 20580369 - 20580446
Alignment:
Q  138 cacccttaccttagataatcaaaatcgcagcccttctaggtcctcttcccttttcttgacttttctcccttttctctg 215  Q
    |||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||| |||||| |||||||||    
T  20580369 cacccttaccttagataatcgaaatcgcagcccttctaggttctcttcccttttcttgactcttctcctttttctctg 20580446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 138 - 215
Target Start/End: Complemental strand, 45495371 - 45495294
Alignment:
Q  138 cacccttaccttagataatcaaaatcgcagcccttctaggtcctcttcccttttcttgacttttctcccttttctctg 215  Q
    |||||||||||||||||||| |||||||||||||||| ||| ||||||||||||||||||| ||||||||||||||||    
T  45495371 cacccttaccttagataatcgaaatcgcagcccttcttggttctcttcccttttcttgactgttctcccttttctctg 45495294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 138 - 215
Target Start/End: Original strand, 24088320 - 24088397
Alignment:
Q  138 cacccttaccttagataatcaaaatcgcagcccttctaggtcctcttcccttttcttgacttttctcccttttctctg 215  Q
    |||||||||||||| ||||| || ||||||||| ||| ||||||||||||||||||||||||||||||||||||||||    
T  24088320 cacccttaccttagttaatcgaagtcgcagcccctcttggtcctcttcccttttcttgacttttctcccttttctctg 24088397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 62 - 150
Target Start/End: Original strand, 47191465 - 47191553
Alignment:
Q  62 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctta 150  Q
    ||||| ||||||||||||||||| ||||||| |||||||||||||| |||| |||||||||| || ||| |||||||||||||||||||    
T  47191465 ttctccaaaactaatcctacaacatgttaaatctaatcatcagaatcataggcttaagaaaactgaatgttagtcccacccttacctta 47191553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 62 - 168
Target Start/End: Complemental strand, 15859403 - 15859300
Alignment:
Q  62 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttaccttagataatcaaaa 161  Q
    |||||||||||||| |||||||| |||||||  ||||||||||||||| |||||||| | ||||  ||||||||| ||||||||||||| ||||||||||    
T  15859403 ttctcaaaaactaaacctacaacatgttaaa--taatcatcagaattacagacttaatagaattaaatgctagtctcacccttacctta-ataatcaaaa 15859307  T
Q  162 tcgcagc 168  Q
    |||||||    
T  15859306 tcgcagc 15859300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 58 - 157
Target Start/End: Complemental strand, 21042597 - 21042498
Alignment:
Q  58 caatttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttaccttagataatc 157  Q
    |||||||||||||||||| |||||||| ||||||| ||||| |||| ||| |||| |||||||| |||| ||| ||||||||||||||||||||| ||||    
T  21042597 caatttctcaaaaactaaacctacaacatgttaaatctaattatcataatcataggcttaagaagattgaatgttagtcccacccttaccttagaaaatc 21042498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 43 - 213
Target Start/End: Original strand, 50687457 - 50687626
Alignment:
Q  43 tttaacctaattccccaatttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccaccc 142  Q
    ||||||||||||| | |||| ||| ||||| ||||||||| |||||||||  ||||||||||||||| |||||||| || |||| ||||||||| ||| |    
T  50687457 tttaacctaattctcaaatt-ctctaaaaccaatcctaca-cttgttaaatttaatcatcagaattacagacttaataagattgaatgctagtctcactc 50687554  T
Q  143 ttaccttagataatcaaaatcgcagcc-cttctaggtcctcttcccttttcttgacttttctcccttttctc 213  Q
    ||||||||   | || ||||||||||| ||| | ||| ||  || |||||||||||||||||||||||||||    
T  50687555 ttaccttaagaattcgaaatcgcagcctcttgttggttcttctctcttttcttgacttttctcccttttctc 50687626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 62 - 151
Target Start/End: Original strand, 22125162 - 22125251
Alignment:
Q  62 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttaccttag 151  Q
    |||||||||||||| |||||||| ||||||| |||||||||||||| |||| |||||||| |||| ||| || |||||||||||||||||    
T  22125162 ttctcaaaaactaaccctacaacatgttaaatctaatcatcagaatcataggcttaagaagattgaatgttactcccacccttaccttag 22125251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 77 - 213
Target Start/End: Original strand, 22777340 - 22777476
Alignment:
Q  77 cctacaacttgttaaagctaatcatcagaattat-agacttaagaaaattggatgctagtcccacccttaccttagataatcaaaatcgcagc--ccttc 173  Q
    |||||||||||||||| ||||||||||||||||| || ||||||||||||| ||| ||||| |||||| |||||| | |||||||||||||||  |  ||    
T  22777340 cctacaacttgttaaatctaatcatcagaattataaggcttaagaaaattgaatgttagtctcaccctaaccttata-aatcaaaatcgcagcttctctc 22777438  T
Q  174 taggtcctcttcccttttcttgacttttctcccttttctc 213  Q
    | ||| |||||  ||  |||||||||||||||||||||||    
T  22777439 ttggttctctt--ctcctcttgacttttctcccttttctc 22777476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 43 - 152
Target Start/End: Complemental strand, 27652497 - 27652390
Alignment:
Q  43 tttaacctaattccccaatttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccaccc 142  Q
    |||||| |||||| |||||| ||| ||||||||| ||||| |||||||||  ||||||||||||||| |||||||| | ||||| ||||||||| |||||    
T  27652497 tttaacttaattctccaatt-ctctaaaactaattctaca-cttgttaaatttaatcatcagaattacagacttaatagaattgaatgctagtctcaccc 27652400  T
Q  143 ttaccttaga 152  Q
    ||||||||||    
T  27652399 ttaccttaga 27652390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 62 - 150
Target Start/End: Original strand, 21342956 - 21343043
Alignment:
Q  62 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctta 150  Q
    ||||| ||||| ||||||||| |||||||||  ||||||||||||||| |||||||| | ||||| |||||||||||||||||||||||    
T  21342956 ttctctaaaaccaatcctaca-cttgttaaatttaatcatcagaattacagacttaatagaattgaatgctagtcccacccttacctta 21343043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 62 - 150
Target Start/End: Original strand, 21347821 - 21347908
Alignment:
Q  62 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctta 150  Q
    ||||| ||||| ||||||||| |||||||||  ||||||||||||||| |||||||| | ||||| |||||||||||||||||||||||    
T  21347821 ttctctaaaaccaatcctaca-cttgttaaatttaatcatcagaattacagacttaatagaattgaatgctagtcccacccttacctta 21347908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 62 - 169
Target Start/End: Complemental strand, 14294815 - 14294709
Alignment:
Q  62 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttaccttagataatcaaaa 161  Q
    ||||| ||||| ||||||||| |||||||||  ||||||||||||||| |||||||| | ||||| ||||||||| |||||||||||||||  |  ||||    
T  14294815 ttctctaaaaccaatcctaca-cttgttaaatttaatcatcagaattacagacttaatagaattgaatgctagtctcacccttaccttagaataagaaaa 14294717  T
Q  162 tcgcagcc 169  Q
    ||||||||    
T  14294716 tcgcagcc 14294709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 67 - 150
Target Start/End: Original strand, 20958998 - 20959081
Alignment:
Q  67 aaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctta 150  Q
    ||||||||| ||| |||| ||||||| |||||||||||||| |||| |||||||| |||| ||| |||||||||||||||||||    
T  20958998 aaaaactaaaccttcaacatgttaaatctaatcatcagaatcataggcttaagaagattgaatgttagtcccacccttacctta 20959081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 62 - 169
Target Start/End: Original strand, 51131421 - 51131527
Alignment:
Q  62 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttaccttagataatcaaaa 161  Q
    ||||| ||||| ||||||||| |||||||||  ||||||||||||||| |||||||| | ||||| ||||||||| |||||||||||||||  |  ||||    
T  51131421 ttctctaaaaccaatcctaca-cttgttaaatttaatcatcagaattacagacttaatagaattgaatgctagtctcacccttaccttagaataagaaaa 51131519  T
Q  162 tcgcagcc 169  Q
    ||||||||    
T  51131520 tcgcagcc 51131527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 65 - 150
Target Start/End: Complemental strand, 52940112 - 52940027
Alignment:
Q  65 tcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctta 150  Q
    ||||||||||| |||||||| ||||||| |||||||||||||||| || |||||||| |||| ||| ||||| ||| |||||||||    
T  52940112 tcaaaaactaaccctacaacatgttaaatctaatcatcagaattaaaggcttaagaagattgaatgttagtctcactcttacctta 52940027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 64 - 150
Target Start/End: Original strand, 16382001 - 16382087
Alignment:
Q  64 ctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctta 150  Q
    ||||||||||||||||||||| |||||||   || |||  |||||| |||||||| | ||||| |||||||||||||||||||||||    
T  16382001 ctcaaaaactaatcctacaacatgttaaatacaaccatatgaattacagacttaatagaattgaatgctagtcccacccttacctta 16382087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 44 - 150
Target Start/End: Original strand, 48521359 - 48521463
Alignment:
Q  44 ttaacctaattccccaatttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccaccct 143  Q
    |||||||||||| |||||| ||||||| |||| ||| |||| ||||||| ||||| |||||||| | || |||||||| |||| ||| ||||||||||||    
T  48521359 ttaacctaattctccaatt-ctcaaaa-ctaaacctccaacatgttaaatctaattatcagaatcacaggcttaagaagattgaatgttagtcccaccct 48521456  T
Q  144 tacctta 150  Q
    |||||||    
T  48521457 tacctta 48521463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 56 - 168
Target Start/End: Complemental strand, 20453731 - 20453619
Alignment:
Q  56 cccaatttctcaaaaacta-atcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttaccttagata 154  Q
    ||||| ||||||||||||| | |||||| | ||||||| ||||| |||| ||| |||| |||||||| |||| ||| ||||| ||||||||||||| | |    
T  20453731 cccaaattctcaaaaactataacctacagcatgttaaatctaattatcaaaatcataggcttaagaagattgaatgttagtctcacccttacctta-aca 20453633  T
Q  155 atcaaaatcgcagc 168  Q
    ||||||||||||||    
T  20453632 atcaaaatcgcagc 20453619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 113 - 213
Target Start/End: Complemental strand, 41049209 - 41049110
Alignment:
Q  113 acttaagaaaattggatgctagtcccacccttaccttagataatcaaaatcgcagcccttctaggtcctcttcccttttcttgac-ttttctcccttttc 211  Q
    |||||| | ||||| ||||||||| ||||||||||||||| |||  |||||||||||| |||||||||||||| ||| ||||| | ||||||||||||||    
T  41049209 acttaatagaattgaatgctagtctcacccttaccttaga-aattgaaatcgcagccc-tctaggtcctcttcacttctcttggctttttctcccttttc 41049112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 99 - 213
Target Start/End: Original strand, 26065861 - 26065976
Alignment:
Q  99 catcagaattataga-cttaagaaaattggatgctagtcccacccttaccttagataatcaaaatcgcagcccttctaggtcctcttcccttttcttgac 197  Q
    ||||||||||||| | ||||| | ||||| ||||||||| ||||||||||||||| |||  ||||||||||| ||||||||| ||||| ||| ||||| |    
T  26065861 catcagaattatacaacttaatagaattgaatgctagtctcacccttaccttaga-aattgaaatcgcagcctttctaggtcttcttctcttctcttggc 26065959  T
Q  198 -ttttctcccttttctc 213  Q
     ||||||| ||||||||    
T  26065960 tttttctctcttttctc 26065976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 101 - 168
Target Start/End: Complemental strand, 22130075 - 22130009
Alignment:
Q  101 tcagaattatagacttaagaaaattggatgctagtcccacccttaccttagataatcaaaatcgcagc 168  Q
    ||||||| |||| |||||||| |||| ||| ||||||||||||||||||| |||||||||||||||||    
T  22130075 tcagaatcataggcttaagaagattgaatgttagtcccacccttacctta-ataatcaaaatcgcagc 22130009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 100 - 209
Target Start/End: Complemental strand, 50613289 - 50613179
Alignment:
Q  100 atcagaattatagacttaagaaaattggatgctagtcccacccttaccttagataatcaaaatcgcagcc-cttctaggtcctcttcccttttcttgact 198  Q
    |||| ||||| |||||||| |  |||| ||| ||||| ||||||||||||||| |||| ||||||||||| ||  | |||||||||| ||| | ||||||    
T  50613289 atcataattacagacttaataggattgaatgttagtctcacccttaccttagaaaatcgaaatcgcagcctctctttggtcctcttctcttctattgact 50613190  T
Q  199 tttctcccttt 209  Q
    |||||||||||    
T  50613189 tttctcccttt 50613179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 100 - 209
Target Start/End: Complemental strand, 50621117 - 50621007
Alignment:
Q  100 atcagaattatagacttaagaaaattggatgctagtcccacccttaccttagataatcaaaatcgcagcc-cttctaggtcctcttcccttttcttgact 198  Q
    |||| ||||| |||||||| |  |||| ||| ||||| ||||||||||||||| |||| ||||||||||| ||  | |||||||||| ||| | ||||||    
T  50621117 atcataattacagacttaataggattgaatgttagtctcacccttaccttagaaaatcgaaatcgcagcctctctttggtcctcttctcttctattgact 50621018  T
Q  199 tttctcccttt 209  Q
    |||||||||||    
T  50621017 tttctcccttt 50621007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 69 - 150
Target Start/End: Complemental strand, 13880619 - 13880538
Alignment:
Q  69 aaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctta 150  Q
    ||||||| ||| |||| ||||||| ||||| |||||||| | || |||||||| |||| ||| |||||||||||||||||||    
T  13880619 aaactaaacctccaacatgttaaatctaattatcagaatcacaggcttaagaagattgaatgttagtcccacccttacctta 13880538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 40 - 150
Target Start/End: Complemental strand, 14237766 - 14237655
Alignment:
Q  40 acttttaacc-taattccccaatttctcaaaaactaat-cctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcc 137  Q
    |||||||||| |||||||| |||| ||||||||||||  |||||||| ||||||| | |||  ||||||| ||||||||||||  |||| ||  ||||||    
T  14237766 acttttaaccctaattcccaaatt-ctcaaaaactaaaacctacaacatgttaaatccaattttcagaatcatagacttaagattattgaatattagtcc 14237668  T
Q  138 cacccttacctta 150  Q
    |||||||||||||    
T  14237667 cacccttacctta 14237655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 62 - 150
Target Start/End: Original strand, 46560042 - 46560130
Alignment:
Q  62 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctta 150  Q
    |||||||||||||| |||||||| |||||||   |||  ||||||| ||||||| ||||  |||| ||| |||||||||||||||||||    
T  46560042 ttctcaaaaactaaacctacaacatgttaaatacaattttcagaatcatagactcaagattattgaatgttagtcccacccttacctta 46560130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 40 - 150
Target Start/End: Original strand, 51083115 - 51083226
Alignment:
Q  40 acttttaacc-taattccccaatttctcaaaaactaat-cctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcc 137  Q
    |||||||||| |||||||| |||| ||||||||||||  |||||||| ||||||| | |||  ||| ||| ||||||||||||  |||| ||| ||||||    
T  51083115 acttttaaccctaattcccaaatt-ctcaaaaactaaaacctacaacatgttaaatccaattttcaaaatcatagacttaagattattgaatgttagtcc 51083213  T
Q  138 cacccttacctta 150  Q
    |||||||||||||    
T  51083214 cacccttacctta 51083226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 62 - 153
Target Start/End: Complemental strand, 22050438 - 22050347
Alignment:
Q  62 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttaccttagat 153  Q
    |||||||||||||| |||||||| | |||||   |||  ||||||| ||||||| ||||  |||| ||| ||||||||||||||||||||||    
T  22050438 ttctcaaaaactaaacctacaacatattaaatacaattttcagaatcatagactcaagattattgaatgttagtcccacccttaccttagat 22050347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 62 - 212
Target Start/End: Original strand, 40390158 - 40390306
Alignment:
Q  62 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagac-ttaagaaaattggatgctagtcccacccttaccttagataatcaaa 160  Q
    ||||| ||||| ||||||||| |||||||||   |||||||||||||||| |  |||| | ||||| ||||||||| ||||||||||||| | |||  ||    
T  40390158 ttctctaaaaccaatcctaca-cttgttaaataaaatcatcagaattatatagattaatagaattgaatgctagtctcacccttaccttatagaat-gaa 40390255  T
Q  161 atcgcagcccttctaggtcctcttcccttttcttgacttttctcccttttct 212  Q
    |||||||| | |||||||  |  |||||| ||||| ||||||||||||||||    
T  40390256 atcgcagctc-tctaggtgtttctcccttctcttggcttttctcccttttct 40390306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 57 - 213
Target Start/End: Original strand, 48444349 - 48444505
Alignment:
Q  57 ccaatttctcaaaaactaat-cctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttaccttagataa 155  Q
    |||| ||||||||||||||  |||||||| ||||||| | |||  ||||||| |  |||||||||  |||| ||| |||||||||||||||||||||  |    
T  48444349 ccaaattctcaaaaactaaaacctacaacatgttaaatccaattttcagaatcaatgacttaagattattgaatgttagtcccacccttaccttagaata 48444448  T
Q  156 tcaaaatcgcagcccttctaggtcctcttcccttttcttgac-ttttctcccttttctc 213  Q
      ||||||||||||  |||| || ||  |||||| ||||| | ||||||||||||||||    
T  48444449 agaaaatcgcagcc--tctatgtgcttctcccttctcttggctttttctcccttttctc 48444505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 62 - 168
Target Start/End: Complemental strand, 22122255 - 22122149
Alignment:
Q  62 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttaccttagataatcaaaa 161  Q
    |||||||||||||| |||||||| | |||||   |||  ||||||| ||||||| ||||  |||| ||| |||||||||||||||||| ||  || ||||    
T  22122255 ttctcaaaaactaaacctacaacatattaaatacaattttcagaatcatagactcaagattattgaatgttagtcccacccttaccttggaatataaaaa 22122156  T
Q  162 tcgcagc 168  Q
    |||||||    
T  22122155 tcgcagc 22122149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 62 - 168
Target Start/End: Complemental strand, 41231028 - 41230922
Alignment:
Q  62 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttaccttagataatcaaaa 161  Q
    |||||||||||||| | |||||| |||||||   |||  ||||||| ||||||| ||||  |||| ||| |||||||||||||||||| ||  || ||||    
T  41231028 ttctcaaaaactaaacttacaacatgttaaatacaattttcagaatcatagactcaagattattgaatgttagtcccacccttaccttggaatataaaaa 41230929  T
Q  162 tcgcagc 168  Q
    |||||||    
T  41230928 tcgcagc 41230922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 40 - 179
Target Start/End: Original strand, 13989703 - 13989842
Alignment:
Q  40 acttttaacc-taattccccaatttctcaaaaactaat-cctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcc 137  Q
    |||||||||| |||||||| |||| ||||||||||||  |||||||| ||||||| | |||  ||||||| |  |||||||||  |||| ||| ||||||    
T  13989703 acttttaaccctaattcccaaatt-ctcaaaaactaaaacctacaacatgttaaatccaattttcagaatcaatgacttaagattattgaatgttagtcc 13989801  T
Q  138 cacccttaccttagataatcaaaatcgcagcccttctaggtc 179  Q
    ||||||||||||| |  || ||||||||||| || |||||||    
T  13989802 cacccttaccttata-gatgaaaatcgcagcactcctaggtc 13989842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 56 - 152
Target Start/End: Original strand, 41373327 - 41373424
Alignment:
Q  56 cccaatttctcaaaaactaat-cctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttaccttaga 152  Q
    ||||| ||||||||||||||  |||||||| ||||||| | |||  ||||||| |  |||||||||  |||| ||| |||||||||||||||||||||    
T  41373327 cccaaattctcaaaaactaaaacctacaacatgttaaatccaattttcagaatcaatgacttaagattattgaatgttagtcccacccttaccttaga 41373424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 103 - 167
Target Start/End: Complemental strand, 45574067 - 45574003
Alignment:
Q  103 agaattatagacttaagaaaattggatgctagtcccacccttaccttagataatcaaaatcgcag 167  Q
    ||||| |||| |||||||| |||| ||| ||||||||||||||||||||| | | ||||||||||    
T  45574067 agaatcataggcttaagaagattgaatgttagtcccacccttaccttagaaagtgaaaatcgcag 45574003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 62 - 153
Target Start/End: Original strand, 29298995 - 29299086
Alignment:
Q  62 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttaccttagat 153  Q
    |||||||||||||| |||||||| | |||||   |||  ||||||| ||||| | ||||  |||| ||| ||||||||||||||||||||||    
T  29298995 ttctcaaaaactaaacctacaacatattaaatacaattttcagaatcatagattcaagattattgaatgttagtcccacccttaccttagat 29299086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 95 - 150
Target Start/End: Complemental strand, 43629352 - 43629297
Alignment:
Q  95 taatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctta 150  Q
    ||||||||||||||| |||||||| || |||| ||| ||||| |||||||||||||    
T  43629352 taatcatcagaattacagacttaataagattgaatgttagtctcacccttacctta 43629297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 43 - 168
Target Start/End: Original strand, 12272435 - 12272558
Alignment:
Q  43 tttaacctaattccccaatttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccaccc 142  Q
    ||||||||||||| |||| ||||| |||  |||||||||| |||||||||  ||||||||||||  | | |||||| || |||| ||||||||| ||| |    
T  12272435 tttaacctaattctccaacttctctaaat-taatcctaca-cttgttaaat-taatcatcagaagaaaaaacttaataagattgaatgctagtcgcactc 12272531  T
Q  143 ttaccttag-ataatcaaaatcgcagc 168  Q
    ||||||||| | |||| ||||||||||    
T  12272532 ttaccttagcaaaatcgaaatcgcagc 12272558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 57 - 150
Target Start/End: Original strand, 16362774 - 16362868
Alignment:
Q  57 ccaatttctcaaaaactaat-cctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctta 150  Q
    |||| ||||||||||||||  |||||||| ||||||| | |||  ||||||| |  |||||||||  |||| ||| |||||||||||||||||||    
T  16362774 ccaaattctcaaaaactaaaacctacaacatgttaaatccaattttcagaatcaatgacttaagattattgaatgttagtcccacccttacctta 16362868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 40 - 152
Target Start/End: Complemental strand, 23593055 - 23592942
Alignment:
Q  40 acttttaacc-taattccccaatttctcaaaaactaat-cctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcc 137  Q
    |||||||||| |||||||| |||| ||||||||||||  |||||||| ||||||| | |||  |||||||    |||||||||  |||| ||| ||||||    
T  23593055 acttttaaccctaattcccaaatt-ctcaaaaactaaaacctacaacatgttaaatccaattttcagaatcgatgacttaagattattgaatgttagtcc 23592957  T
Q  138 cacccttaccttaga 152  Q
    |||||||||||||||    
T  23592956 cacccttaccttaga 23592942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 62 - 150
Target Start/End: Complemental strand, 13212280 - 13212192
Alignment:
Q  62 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagac-ttaagaaaattggatgctagtcccacccttacctta 150  Q
    ||||| ||||| ||||||||| |||||||||   |||||||||||||||| |  |||| | ||||| ||||||||| |||||||||||||    
T  13212280 ttctctaaaaccaatcctaca-cttgttaaataaaatcatcagaattatatagattaatagaattgaatgctagtctcacccttacctta 13212192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 40 - 179
Target Start/End: Complemental strand, 21474409 - 21474270
Alignment:
Q  40 acttttaacc-taattccccaatttctcaaaaactaat-cctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcc 137  Q
    |||||||||| |||||||| |||| ||||||||||||  |||||||| ||||||| | |||  |||||||    |||||||||  |||| ||| ||||||    
T  21474409 acttttaaccctaattcccaaatt-ctcaaaaactaaaacctacaacatgttaaatccaattttcagaatcgatgacttaagattattgaatgttagtcc 21474311  T
Q  138 cacccttaccttagataatcaaaatcgcagcccttctaggtc 179  Q
    ||||||||||||| |  || ||||||||||| || |||||||    
T  21474310 cacccttaccttata-gatgaaaatcgcagcactcctaggtc 21474270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 40 - 179
Target Start/End: Complemental strand, 21922614 - 21922475
Alignment:
Q  40 acttttaacc-taattccccaatttctcaaaaactaat-cctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcc 137  Q
    |||||||||| |||||||| |||| ||||||||| ||  |||||||| ||||||| | |||  ||||||| |  |||||||||  |||| ||| ||||||    
T  21922614 acttttaaccctaattcccaaatt-ctcaaaaacgaaaacctacaacatgttaaatccaattttcagaatcaatgacttaagattattgaatgttagtcc 21922516  T
Q  138 cacccttaccttagataatcaaaatcgcagcccttctaggtc 179  Q
    ||||||||||||| |  || ||||||||||| || |||||||    
T  21922515 cacccttaccttata-gatgaaaatcgcagcactcctaggtc 21922475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 62 - 150
Target Start/End: Complemental strand, 9044606 - 9044518
Alignment:
Q  62 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctta 150  Q
    |||||||||||||| |||||||| ||||||    |||  ||||||| ||||||| ||||  |||| ||| ||||| |||||||||||||    
T  9044606 ttctcaaaaactaaacctacaacatgttaagtacaattttcagaatcatagactcaagattattgaatgttagtctcacccttacctta 9044518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 62 - 150
Target Start/End: Complemental strand, 16274661 - 16274573
Alignment:
Q  62 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctta 150  Q
    |||||||||||||| |||||||| |||||||   |||  ||| ||| ||||||| ||||  |||| ||| ||||| |||||||||||||    
T  16274661 ttctcaaaaactaaacctacaacatgttaaatacaattttcaaaatcatagactcaagattattgaatgttagtctcacccttacctta 16274573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 122 - 213
Target Start/End: Original strand, 49262015 - 49262105
Alignment:
Q  122 aattggatgctagtcccacccttaccttagataatcaaaatcgcagcccttctaggtcctcttcccttttcttgac-ttttctcccttttctc 213  Q
    ||||| |||||| || ||||||||||||||| |||  |||||||||| | |||||||| || |||||| ||||| | ||||||||||||||||    
T  49262015 aattgaatgctaatctcacccttaccttaga-aattgaaatcgcagctc-tctaggtcttcctcccttctcttggctttttctcccttttctc 49262105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106 (Bit Score: 69; Significance: 4e-31; HSPs: 1)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 62 - 146
Target Start/End: Complemental strand, 18941 - 18857
Alignment:
Q  62 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttac 146  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||| ||||| |||||||||    
T  18941 ttctcaaaaactaatcctacaacttgttaaatctaatcatcagaattatagacttaagaaaattgaatgttagtctcacccttac 18857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 68; Significance: 2e-30; HSPs: 2)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 138 - 213
Target Start/End: Original strand, 163374 - 163449
Alignment:
Q  138 cacccttaccttagataatcaaaatcgcagcccttctaggtcctcttcccttttcttgacttttctcccttttctc 213  Q
    |||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  163374 cacccttaccttagataatcgaaatcgcagcccttctaggtactcttcccttttcttgacttttctcccttttctc 163449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 40 - 179
Target Start/End: Original strand, 95248 - 95387
Alignment:
Q  40 acttttaacc-taattccccaatttctcaaaaactaat-cctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcc 137  Q
    |||||||||| |||||||| |||| ||||||||||||  |||||||| ||||||| | |||  ||||||| |  |||||||||  |||| ||| ||||||    
T  95248 acttttaaccctaattcccaaatt-ctcaaaaactaaaacctacaacatgttaaatccaattttcagaatcaatgacttaagattattgaatgttagtcc 95346  T
Q  138 cacccttaccttagataatcaaaatcgcagcccttctaggtc 179  Q
    ||||||||||||| |  || ||||||||||| || |||||||    
T  95347 cacccttaccttata-gatgaaaatcgcagcactcctaggtc 95387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 67 - 150
Target Start/End: Original strand, 333206 - 333289
Alignment:
Q  67 aaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctta 150  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||| ||||| |||||||||||||    
T  333206 aaaaactaatcctacaacttgttaaatctaatcatcagaattatagacttaagaaaattgaatgttagtctcacccttacctta 333289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046 (Bit Score: 67; Significance: 6e-30; HSPs: 2)
Name: scaffold0046
Description:

Target: scaffold0046; HSP #1
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 48 - 211
Target Start/End: Complemental strand, 25373 - 25212
Alignment:
Q  48 cctaattccccaatttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacc 147  Q
    |||||||| |||| || ||||||||||||||||||||||| |||| ||||||||||||||||| ||||||||||||||| ||| ||||| ||||||||||    
T  25373 cctaattctccaactt-tcaaaaactaatcctacaacttgctaaatctaatcatcagaattatcgacttaagaaaattgaatgttagtctcacccttacc 25275  T
Q  148 ttagataatcaaaatc-gcagccct-tctaggtcctcttcccttttcttgacttttctcccttttc 211  Q
    ||| | | |||||||| |||||  | |||||||  || |||||| |||||||||||||||||||||    
T  25274 ttata-attcaaaatctgcagctttctctaggt--tcctcccttctcttgacttttctcccttttc 25212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 48 - 150
Target Start/End: Complemental strand, 16186 - 16085
Alignment:
Q  48 cctaattccccaatttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacc 147  Q
    |||||||| |||| || ||||||||||||||||||||||| |||| ||||||||| ||||||||||||||||||||||| ||| ||||| ||||||||||    
T  16186 cctaattctccaactt-tcaaaaactaatcctacaacttgctaaatctaatcatccgaattatagacttaagaaaattgaatgttagtctcacccttacc 16088  T
Q  148 tta 150  Q
    |||    
T  16087 tta 16085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0525 (Bit Score: 66; Significance: 3e-29; HSPs: 2)
Name: scaffold0525
Description:

Target: scaffold0525; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 138 - 215
Target Start/End: Complemental strand, 7621 - 7544
Alignment:
Q  138 cacccttaccttagataatcaaaatcgcagcccttctaggtcctcttcccttttcttgacttttctcccttttctctg 215  Q
    |||||||||||||||||||| |||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||    
T  7621 cacccttaccttagataatcgaaatcgcagcccttcttggttctcttcccttttcttgacttttctcccttttctctg 7544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0525; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 138 - 215
Target Start/End: Original strand, 10075 - 10152
Alignment:
Q  138 cacccttaccttagataatcaaaatcgcagcccttctaggtcctcttcccttttcttgacttttctcccttttctctg 215  Q
    |||||||||||||||||||| |||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||    
T  10075 cacccttaccttagataatcgaaatcgcagcccttcttggttctcttcccttttcttgacttttctcccttttctctg 10152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 66; Significance: 3e-29; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 138 - 215
Target Start/End: Complemental strand, 133186 - 133109
Alignment:
Q  138 cacccttaccttagataatcaaaatcgcagcccttctaggtcctcttcccttttcttgacttttctcccttttctctg 215  Q
    |||||||||||||||||||| |||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||    
T  133186 cacccttaccttagataatcgaaatcgcagcccttcttggttctcttcccttttcttgacttttctcccttttctctg 133109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 66; Significance: 3e-29; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 138 - 215
Target Start/End: Complemental strand, 253773 - 253696
Alignment:
Q  138 cacccttaccttagataatcaaaatcgcagcccttctaggtcctcttcccttttcttgacttttctcccttttctctg 215  Q
    |||||||||||||||||||| |||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||    
T  253773 cacccttaccttagataatcgaaatcgcagcccttcttggttctcttcccttttcttgacttttctcccttttctctg 253696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 66; Significance: 3e-29; HSPs: 59)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 138 - 215
Target Start/End: Original strand, 8523835 - 8523912
Alignment:
Q  138 cacccttaccttagataatcaaaatcgcagcccttctaggtcctcttcccttttcttgacttttctcccttttctctg 215  Q
    |||||||||||||||||||| |||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||    
T  8523835 cacccttaccttagataatcgaaatcgcagcccttcttggttctcttcccttttcttgacttttctcccttttctctg 8523912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 138 - 215
Target Start/End: Original strand, 16830701 - 16830778
Alignment:
Q  138 cacccttaccttagataatcaaaatcgcagcccttctaggtcctcttcccttttcttgacttttctcccttttctctg 215  Q
    |||||||||||||||||||| |||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||    
T  16830701 cacccttaccttagataatcgaaatcgcagcccttcttggttctcttcccttttcttgacttttctcccttttctctg 16830778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 138 - 215
Target Start/End: Original strand, 22593185 - 22593262
Alignment:
Q  138 cacccttaccttagataatcaaaatcgcagcccttctaggtcctcttcccttttcttgacttttctcccttttctctg 215  Q
    |||||||||||||||||||| |||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||    
T  22593185 cacccttaccttagataatcgaaatcgcagcccttcttggttctcttcccttttcttgacttttctcccttttctctg 22593262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 138 - 215
Target Start/End: Original strand, 29493658 - 29493735
Alignment:
Q  138 cacccttaccttagataatcaaaatcgcagcccttctaggtcctcttcccttttcttgacttttctcccttttctctg 215  Q
    |||||||||||||||||||| |||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||    
T  29493658 cacccttaccttagataatcgaaatcgcagcccttcttggttctcttcccttttcttgacttttctcccttttctctg 29493735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 64 - 150
Target Start/End: Complemental strand, 23527386 - 23527300
Alignment:
Q  64 ctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctta 150  Q
    ||||||||||||||||| ||| ||||||| |||||||||||||||| || ||||||||||||| |||||||||||||||||||||||    
T  23527386 ctcaaaaactaatcctataacatgttaaatctaatcatcagaattacaggcttaagaaaattgaatgctagtcccacccttacctta 23527300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 40 - 150
Target Start/End: Original strand, 18697374 - 18697482
Alignment:
Q  40 acttttaacctaattccccaatttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtccca 139  Q
    |||||||||||||||| |||||| ||||||| |||| ||| |||| ||||||| ||||| |||||||| |||| |||||||| |||| ||||||||||||    
T  18697374 acttttaacctaattctccaatt-ctcaaaa-ctaaacctccaacatgttaaatctaattatcagaatcataggcttaagaagattgaatgctagtccca 18697471  T
Q  140 cccttacctta 150  Q
    |||||||||||    
T  18697472 cccttacctta 18697482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 68 - 210
Target Start/End: Complemental strand, 22792512 - 22792372
Alignment:
Q  68 aaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctta-gataatcaaaatc-gc 165  Q
    |||||||| |||||||||||||||| ||||||||||||| ||||  ||||||||||||| ||| ||||| ||||||||||||| |||  |||||||| ||    
T  22792512 aaaactaaacctacaacttgttaaatctaatcatcagaaatataagcttaagaaaattgaatgttagtctcacccttaccttatgat--tcaaaatcggc 22792415  T
Q  166 agcccttctaggtcctcttcccttttcttgacttttctccctttt 210  Q
    ||||  ||| |||  ||||||||| ||||||||||||||| ||||    
T  22792414 agcctctcttggt--tcttcccttctcttgacttttctccatttt 22792372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 62 - 157
Target Start/End: Complemental strand, 17229152 - 17229057
Alignment:
Q  62 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttaccttagataatc 157  Q
    |||||||||||||| |||||||| ||||||| ||||| || ||||| |||| |||||||| |||| ||| ||||||||||||||||||||| ||||    
T  17229152 ttctcaaaaactaaacctacaacatgttaaatctaattattagaatcataggcttaagaagattgaatgttagtcccacccttaccttagaaaatc 17229057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 40 - 150
Target Start/End: Original strand, 18707125 - 18707233
Alignment:
Q  40 acttttaacctaattccccaatttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtccca 139  Q
    |||||||||||||||| |||||| ||||||| |||| ||| |||| ||||||| ||||| |||||||| || | |||||||| |||| ||||||||||||    
T  18707125 acttttaacctaattctccaatt-ctcaaaa-ctaaacctccaacatgttaaatctaattatcagaatcatgggcttaagaagattgaatgctagtccca 18707222  T
Q  140 cccttacctta 150  Q
    |||||||||||    
T  18707223 cccttacctta 18707233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 62 - 213
Target Start/End: Original strand, 19363330 - 19363480
Alignment:
Q  62 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttaccttagataatc-aaa 160  Q
    ||||| ||||||||||||||||| ||||||| |||||||   |||| |||| ||||||||||||| ||| ||||| |||||||||||||   |||| |||    
T  19363330 ttctccaaaactaatcctacaacatgttaaatctaatca---gaatcataggcttaagaaaattgaatgttagtctcacccttaccttaacaaatcgaaa 19363426  T
Q  161 atcgcagc-ccttctaggtcctcttcccttttcttgacttttctcccttttctc 213  Q
     || ||||  | ||||||| ||| || ||| |||||||||||||||||||||||    
T  19363427 ttcacagcttcctctaggttctcctctcttctcttgacttttctcccttttctc 19363480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 62 - 152
Target Start/End: Original strand, 18454091 - 18454181
Alignment:
Q  62 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttaccttaga 152  Q
    |||||||||| ||| |||||||| ||||||| ||||| |||||||| |||  |||||||| |||| ||| |||||||||||||||||||||    
T  18454091 ttctcaaaaattaaacctacaacatgttaaatctaattatcagaatcatatgcttaagaagattgaatgttagtcccacccttaccttaga 18454181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 62 - 150
Target Start/End: Complemental strand, 18895571 - 18895486
Alignment:
Q  62 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctta 150  Q
    ||||||||||||||||||||||||||||||| |||   |||| ||| |||| ||||||||||||| ||| ||||| |||||||||||||    
T  18895571 ttctcaaaaactaatcctacaacttgttaaatcta---atcaaaatcataggcttaagaaaattgaatgttagtctcacccttacctta 18895486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 62 - 150
Target Start/End: Original strand, 23539794 - 23539882
Alignment:
Q  62 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctta 150  Q
    ||||||||||||||||||||||  |||||||   || ||||||||||||| |||||| | ||| | |||||||||||||||||||||||    
T  23539794 ttctcaaaaactaatcctacaatctgttaaatacaaccatcagaattatacacttaatagaatcgaatgctagtcccacccttacctta 23539882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 68 - 151
Target Start/End: Original strand, 20137544 - 20137627
Alignment:
Q  68 aaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttaccttag 151  Q
    |||||||| |||||||| ||||||| ||||| |||||||| |||| |||||||| |||| ||| ||||||||||||| ||||||    
T  20137544 aaaactaaacctacaacatgttaaatctaattatcagaatcataggcttaagaagattgaatgttagtcccaccctttccttag 20137627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 68 - 151
Target Start/End: Complemental strand, 22195325 - 22195242
Alignment:
Q  68 aaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttaccttag 151  Q
    |||||||| |||||||| ||||||| ||||| |||||||| |||| |||||||| |||| ||| ||||||||||||| ||||||    
T  22195325 aaaactaaacctacaacatgttaaatctaattatcagaatcataggcttaagaagattgaatgttagtcccaccctttccttag 22195242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 40 - 146
Target Start/End: Original strand, 13612322 - 13612427
Alignment:
Q  40 acttttaacctaattccccaatttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtccca 139  Q
    |||||||||||||||| ||||||  ||||||||||| |||||||| |||||||   ||| |||||||||| ||||||| || |||||  || ||||||||    
T  13612322 acttttaacctaattctccaatta-tcaaaaactaaacctacaacatgttaaatacaattatcagaattacagacttaggagaattgattgttagtccca 13612420  T
Q  140 cccttac 146  Q
    |||||||    
T  13612421 cccttac 13612427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 81 - 213
Target Start/End: Complemental strand, 20556103 - 20555972
Alignment:
Q  81 caacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttaccttagataatcaaaatcgcagcccttctaggtcc 180  Q
    |||| ||||||| |||||||||||||| ||||   ||||||||||| ||| ||||||||||||||||||| | ||| ||||||||||| | ||||||| |    
T  20556103 caacatgttaaatctaatcatcagaatcataggtgtaagaaaattgaatgttagtcccacccttacctta-acaatgaaaatcgcagctc-tctaggtgc 20556006  T
Q  181 tcttcccttttctt-gacttttctcccttttctc 213  Q
    |  |||||| |||| |  ||||||||||||||||    
T  20556005 ttctcccttctcttgggtttttctcccttttctc 20555972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 62 - 150
Target Start/End: Original strand, 19024260 - 19024347
Alignment:
Q  62 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctta 150  Q
    ||||| ||||| ||||||||| |||||||||  ||||||||||||||| |||||||| | ||||| |||| |||| |||||||||||||    
T  19024260 ttctctaaaaccaatcctaca-cttgttaaacttaatcatcagaattacagacttaatagaattgaatgcaagtctcacccttacctta 19024347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 62 - 150
Target Start/End: Original strand, 23077587 - 23077675
Alignment:
Q  62 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctta 150  Q
    ||||||||||||||||||||||| |||||||   || ||| ||||| | |||||||| | ||||| ||||||||||||| |||||||||    
T  23077587 ttctcaaaaactaatcctacaacatgttaaatacaaccattagaatcacagacttaatagaattgaatgctagtcccactcttacctta 23077675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 62 - 150
Target Start/End: Original strand, 23992983 - 23993071
Alignment:
Q  62 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctta 150  Q
    |||||||||||||| |||||||| |||||||   |||  ||||||||||||||| ||||  |||| ||| |||||||||||||||||||    
T  23992983 ttctcaaaaactaaacctacaacatgttaaatacaattttcagaattatagactcaagattattgaatgttagtcccacccttacctta 23993071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 86 - 213
Target Start/End: Original strand, 33443950 - 33444081
Alignment:
Q  86 tgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctta--gataatcaaaatcgcagc-ccttctaggtcctc 182  Q
    ||||||| |||||||||||||||||   ||||||| ||||| ||| ||||| |||||||||||||   | |||| ||||||||||  | ||||||| |||    
T  33443950 tgttaaatctaatcatcagaattatcagcttaagagaattgaatgttagtctcacccttaccttaatcaaaatcgaaatcgcagcttcctctaggttctc 33444049  T
Q  183 ttcccttttcttgac-ttttctcccttttctc 213  Q
    ||| ||| ||||||| ||||||||||||||||    
T  33444050 ttctcttctcttgactttttctcccttttctc 33444081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 62 - 150
Target Start/End: Original strand, 35012025 - 35012113
Alignment:
Q  62 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctta 150  Q
    ||||||||||||||||||||||| |||||||   || |||||||||  ||||||||| | ||||| || |||| |||||||||||||||    
T  35012025 ttctcaaaaactaatcctacaacctgttaaatacaaccatcagaatcgtagacttaatagaattgaattctagccccacccttacctta 35012113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 84 - 212
Target Start/End: Complemental strand, 16447820 - 16447693
Alignment:
Q  84 cttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttaccttagataatcaaaatcgcagcccttctaggtcctct 183  Q
    |||||||||  ||||||||||||||| |||||||| || |||| ||| ||||| ||||||||||||| | | ||||||||||||||  |||||||| |||    
T  16447820 cttgttaaatttaatcatcagaattacagacttaataagattgaatgttagtctcacccttaccttata-actcaaaatcgcagcc--tctaggtcttct 16447724  T
Q  184 t-cccttttcttgac-ttttctcccttttct 212  Q
    | | ||| ||||| | |||||||||||||||    
T  16447723 tgctcttctcttggctttttctcccttttct 16447693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 69 - 150
Target Start/End: Complemental strand, 14978624 - 14978543
Alignment:
Q  69 aaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctta 150  Q
    ||||||| ||| |||| ||||||| ||||| |||||||| | || |||||||| |||| ||| |||||||||||||||||||    
T  14978624 aaactaaacctccaacatgttaaatctaattatcagaatcacaggcttaagaagattgaatgttagtcccacccttacctta 14978543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 84 - 212
Target Start/End: Complemental strand, 19102528 - 19102401
Alignment:
Q  84 cttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttaccttagataatcaaaatcgcagcccttctaggtcctct 183  Q
    |||||||||  |||||||||||||||  ||||||| || |||| ||| ||||| ||||||||||||| |  ||  |||||||||||| |||||||| ||     
T  19102528 cttgttaaatttaatcatcagaattactgacttaataagattgaatgttagtctcacccttaccttataagat-gaaatcgcagcccctctaggtcttc- 19102431  T
Q  184 tcccttttcttgac-ttttctcccttttct 212  Q
    |||||| ||||| | |||||||||||||||    
T  19102430 tcccttctcttggctttttctcccttttct 19102401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 69 - 150
Target Start/End: Complemental strand, 25618981 - 25618900
Alignment:
Q  69 aaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctta 150  Q
    ||||||| ||| |||| ||||||| ||||| |||||||| | || |||||||| |||| ||| |||||||||||||||||||    
T  25618981 aaactaaacctccaacatgttaaatctaattatcagaatcacaggcttaagaagattgaatgttagtcccacccttacctta 25618900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 40 - 179
Target Start/End: Original strand, 8055868 - 8056006
Alignment:
Q  40 acttttaacc-taattccccaatttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtccc 138  Q
    |||||||||| |||||||| |||| |||||||||||| |||||||| |||||||   |||  || |||| ||||||| ||||  |||| ||| |||||||    
T  8055868 acttttaaccctaattcccaaatt-ctcaaaaactaaacctacaacatgttaaatacaattttcggaatcatagactcaagattattgaatgttagtccc 8055966  T
Q  139 acccttaccttagataatcaaaatcgcagcccttctaggtc 179  Q
    |||||||||||| |  || ||||||||||| || |||||||    
T  8055967 acccttaccttata-gatgaaaatcgcagcactcctaggtc 8056006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 40 - 179
Target Start/End: Original strand, 12743157 - 12743296
Alignment:
Q  40 acttttaacctaattccccaatttctcaaaaactaat-cctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtccc 138  Q
    ||||||||||| | | ||||| ||||||||||||||  |||||||| ||||||| | |||  ||||||| |  |||||||||  |||| ||| |||||||    
T  12743157 acttttaaccttaattcccaaattctcaaaaactaaaacctacaacatgttaaatccaattttcagaatcaatgacttaagattattgaatgttagtccc 12743256  T
Q  139 acccttaccttagataatcaaaatcgcagcccttctaggtc 179  Q
    |||||||||||| |  || ||||||||||| || |||||||    
T  12743257 acccttaccttata-gatgaaaatcgcagcactcctaggtc 12743296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 62 - 150
Target Start/End: Complemental strand, 17027952 - 17027864
Alignment:
Q  62 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctta 150  Q
    |||||||||||||| |||||||| |||||||   |||  ||||||| ||||||| ||||  |||| ||| |||||||||||||||||||    
T  17027952 ttctcaaaaactaaacctacaacatgttaaatacaattttcagaatcatagactcaagattattgaatgttagtcccacccttacctta 17027864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 62 - 150
Target Start/End: Original strand, 25535969 - 25536057
Alignment:
Q  62 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctta 150  Q
    |||||||||||||| |||||||| |||||||   |||  ||||||| ||||||| ||||  |||| ||| |||||||||||||||||||    
T  25535969 ttctcaaaaactaaacctacaacatgttaaatacaattttcagaatcatagactcaagattattgaatgttagtcccacccttacctta 25536057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 62 - 150
Target Start/End: Original strand, 25689387 - 25689475
Alignment:
Q  62 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctta 150  Q
    |||||||||||||| |||||||| |||||||   |||  ||||||| ||||||| ||||  |||| ||| |||||||||||||||||||    
T  25689387 ttctcaaaaactaaacctacaacatgttaaatacaattttcagaatcatagactcaagattattgaatgttagtcccacccttacctta 25689475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 62 - 150
Target Start/End: Original strand, 25721059 - 25721147
Alignment:
Q  62 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctta 150  Q
    |||||||||||||| |||||||| |||||||   |||  ||||||| ||||||| ||||  |||| ||| |||||||||||||||||||    
T  25721059 ttctcaaaaactaaacctacaacatgttaaatacaattttcagaatcatagactcaagattattgaatgttagtcccacccttacctta 25721147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 62 - 150
Target Start/End: Original strand, 25753402 - 25753490
Alignment:
Q  62 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctta 150  Q
    |||||||||||||| |||||||| |||||||   |||  ||||||| ||||||| ||||  |||| ||| |||||||||||||||||||    
T  25753402 ttctcaaaaactaaacctacaacatgttaaatacaattttcagaatcatagactcaagattattgaatgttagtcccacccttacctta 25753490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 62 - 150
Target Start/End: Original strand, 25755572 - 25755660
Alignment:
Q  62 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctta 150  Q
    |||||||||||||| |||||||| |||||||   |||  ||||||| ||||||| ||||  |||| ||| |||||||||||||||||||    
T  25755572 ttctcaaaaactaaacctacaacatgttaaatacaattttcagaatcatagactcaagattattgaatgttagtcccacccttacctta 25755660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 62 - 150
Target Start/End: Original strand, 34963934 - 34964022
Alignment:
Q  62 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctta 150  Q
    |||||||||||||| |||||||| |||||||   |||  ||||||| ||||||| ||||  |||| ||| |||||||||||||||||||    
T  34963934 ttctcaaaaactaaacctacaacatgttaaatacaattttcagaatcatagactcaagattattgaatgttagtcccacccttacctta 34964022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 40 - 150
Target Start/End: Complemental strand, 17882820 - 17882710
Alignment:
Q  40 acttttaacc-taattccccaatttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtccc 138  Q
    |||||||||| |||||||| |||| |||||||||||| |||||||| |||||||   |||  ||||||| ||||||| ||||  |||| ||| ||||| |    
T  17882820 acttttaaccctaattcccaaatt-ctcaaaaactaaacctacaacatgttaaatgcaattttcagaatcatagactcaagattattgaatgttagtctc 17882722  T
Q  139 acccttacctta 150  Q
    ||||||||||||    
T  17882721 acccttacctta 17882710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 62 - 153
Target Start/End: Complemental strand, 31629949 - 31629858
Alignment:
Q  62 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttaccttagat 153  Q
    |||||||||||||| |||||||| |||||||   |||  ||||||| ||||||| ||||  |||| ||| ||||| ||||||||||||||||    
T  31629949 ttctcaaaaactaaacctacaacatgttaaatacaattttcagaatcatagactcaagattattgaatgttagtctcacccttaccttagat 31629858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 62 - 168
Target Start/End: Original strand, 1598995 - 1599101
Alignment:
Q  62 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttaccttagataatcaaaa 161  Q
    ||||||||||||||  ||||||| |||||||   |||  ||||||| ||||||| ||||  |||| ||| |||||||||||||||||| ||  || ||||    
T  1598995 ttctcaaaaactaaatctacaacatgttaaatacaattttcagaatcatagactcaagattattgaatgttagtcccacccttaccttggaatataaaaa 1599094  T
Q  162 tcgcagc 168  Q
    |||||||    
T  1599095 tcgcagc 1599101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 101 - 213
Target Start/End: Complemental strand, 23531945 - 23531834
Alignment:
Q  101 tcagaattatagacttaagaaaattggatgctagtcccacccttaccttagataatcaaaatcgcagcccttctaggtcctcttcccttttcttgac-tt 199  Q
    ||||||| |||| |||||||| |||| ||| |||||||||||||||||||||  |  ||||||||||||  |||| || ||  |||||| ||||| | ||    
T  23531945 tcagaatcataggcttaagaagattgaatgttagtcccacccttaccttagaataagaaaatcgcagcc--tctatgtgcttctcccttctcttggcttt 23531848  T
Q  200 ttctcccttttctc 213  Q
    ||||||||||||||    
T  23531847 ttctcccttttctc 23531834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 62 - 168
Target Start/End: Complemental strand, 30676127 - 30676022
Alignment:
Q  62 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttaccttagataatcaaaa 161  Q
    |||||||||||||| |||||||| |||||||   |||  ||||||| ||||||| ||||  |||| ||| ||||| ||||||||||||| | ||| ||||    
T  30676127 ttctcaaaaactaaacctacaacatgttaaatacaattttcagaatcatagactcaagattattgcatgttagtctcacccttacctta-acaatgaaaa 30676029  T
Q  162 tcgcagc 168  Q
    |||||||    
T  30676028 tcgcagc 30676022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 57 - 122
Target Start/End: Complemental strand, 18198675 - 18198611
Alignment:
Q  57 ccaatttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaa 122  Q
    |||||||||| ||| |||||||||| |||||||||| |||| ||||| ||||||| ||||||||||    
T  18198675 ccaatttctccaaacctaatcctac-acttgttaaatctaagcatcataattatacacttaagaaa 18198611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 40 - 179
Target Start/End: Complemental strand, 18333917 - 18333778
Alignment:
Q  40 acttttaacc-taattccccaatttctcaaaaactaat-cctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcc 137  Q
    |||||||||| |||||||| |||| ||||||||||||  |||||||| ||||||| | |||  ||||||| |  |||||||||  |||| ||| ||||||    
T  18333917 acttttaaccctaattcccaaatt-ctcaaaaactaaaacctacaacatgttaaatccaattttcagaatcaatgacttaagattattgaatgttagtcc 18333819  T
Q  138 cacccttaccttagataatcaaaatcgcagcccttctaggtc 179  Q
    ||||||||||||| |  || ||||||||||| || |||||||    
T  18333818 cacccttaccttata-gatgaaaatcgcagcactcctaggtc 18333778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 84 - 149
Target Start/End: Complemental strand, 21119872 - 21119807
Alignment:
Q  84 cttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctt 149  Q
    |||||||||  ||||||||||||||| |||||||| || |||| ||| ||||| ||||||||||||    
T  21119872 cttgttaaatttaatcatcagaattacagacttaataagattgaatgttagtctcacccttacctt 21119807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 40 - 179
Target Start/End: Original strand, 22783065 - 22783204
Alignment:
Q  40 acttttaacc-taattccccaatttctcaaaaactaat-cctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcc 137  Q
    |||||||||| |||||||| |||| ||||||||||||  |||||||| |||||||   |||  ||||||| ||||||| ||||  |||| ||| ||||||    
T  22783065 acttttaaccctaattcccaaatt-ctcaaaaactaaaacctacaacatgttaaatacaattttcagaatcatagactcaagattattgaatgttagtcc 22783163  T
Q  138 cacccttaccttagataatcaaaatcgcagcccttctaggtc 179  Q
    ||||||||||||| |  || ||||||||||| || |||||||    
T  22783164 cacccttaccttata-gatgaaaatcgcagcactcctaggtc 22783204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 103 - 210
Target Start/End: Original strand, 23415906 - 23416011
Alignment:
Q  103 agaattatagacttaagaaaattggatgctagtcccacccttaccttagataatcaaaatcgcagcccttctaggtcctcttcc-cttttcttgactttt 201  Q
    ||||| |||| |||||||| |||| ||| ||||||||||||||||||| | ||| |||||||| |||  |||||||| ||| || ||| ||||| |||||    
T  23415906 agaatcataggcttaagaagattgaatgttagtcccacccttacctta-agaatgaaaatcgcggcc--tctaggtcttctccctcttctcttggctttt 23416002  T
Q  202 ctccctttt 210  Q
    |||||||||    
T  23416003 ctccctttt 23416011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 40 - 179
Target Start/End: Original strand, 24423384 - 24423523
Alignment:
Q  40 acttttaacc-taattccccaatttctcaaaaactaat-cctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcc 137  Q
    |||||||||| |||||||| |||| ||||||||||||  |||||||| ||||||| | |||  ||||||| |  |||||||||  |||| ||| ||||||    
T  24423384 acttttaaccctaattcccaaatt-ctcaaaaactaaaacctacaacatgttaaatccaattttcagaatcaatgacttaagattattgaatgttagtcc 24423482  T
Q  138 cacccttaccttagataatcaaaatcgcagcccttctaggtc 179  Q
    ||||||||||||| |  || ||||||||||| || |||||||    
T  24423483 cacccttaccttata-gatgaaaatcgcagcactcctaggtc 24423523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 40 - 179
Target Start/End: Original strand, 33865115 - 33865254
Alignment:
Q  40 acttttaacc-taattccccaatttctcaaaaactaat-cctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcc 137  Q
    |||||||||| |||||||| |||| ||||||||||||  |||||||| ||||||| | |||  ||||||| |  |||||||||  |||| ||| ||||||    
T  33865115 acttttaaccctaattcccaaatt-ctcaaaaactaaaacctacaacatgttaaatccaattttcagaatcaatgacttaagattattgaatgttagtcc 33865213  T
Q  138 cacccttaccttagataatcaaaatcgcagcccttctaggtc 179  Q
    ||||||||||||| |  || ||||||||||| || |||||||    
T  33865214 cacccttaccttata-gatgaaaatcgcagcactcctaggtc 33865254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 62 - 150
Target Start/End: Original strand, 16198359 - 16198447
Alignment:
Q  62 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctta 150  Q
    |||||||||||||| |||||||| |||||||   |||  ||||||| ||||||| ||||  |||| ||| ||||| |||||||||||||    
T  16198359 ttctcaaaaactaaacctacaacatgttaaatacaattttcagaatcatagactcaagattattgaatgttagtcacacccttacctta 16198447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 101 - 153
Target Start/End: Complemental strand, 17201129 - 17201077
Alignment:
Q  101 tcagaattatagacttaagaaaattggatgctagtcccacccttaccttagat 153  Q
    ||||||| |||| |||||||| |||| ||| ||||||||||||||||||||||    
T  17201129 tcagaatcataggcttaagaagattgaatgttagtcccacccttaccttagat 17201077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 84 - 179
Target Start/End: Complemental strand, 3851062 - 3850968
Alignment:
Q  84 cttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttaccttagataatcaaaatcgcagcccttctaggtc 179  Q
    |||||||||  |||||||||||||||  ||||||| || |||| ||| ||||| ||||||||||||| |  ||  |||||||||||| ||||||||    
T  3851062 cttgttaaatttaatcatcagaattacggacttaataagattgaatgttagtctcacccttaccttataagat-gaaatcgcagcccctctaggtc 3850968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 56 - 150
Target Start/End: Original strand, 18343044 - 18343139
Alignment:
Q  56 cccaatttctcaaaaactaat-cctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctta 150  Q
    ||||| ||||||||||||||  |||||||| ||||||| | |||  ||||||| |  |||||||||  |||| ||| |||||||||||||||||||    
T  18343044 cccaaattctcaaaaactaaaacctacaacatgttaaatccaattttcagaatcaatgacttaagattattgaatgttagtcccacccttacctta 18343139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 101 - 179
Target Start/End: Complemental strand, 8226789 - 8226712
Alignment:
Q  101 tcagaattatagacttaagaaaattggatgctagtcccacccttaccttagataatcaaaatcgcagcccttctaggtc 179  Q
    ||||||| |||| |||||||| |||| ||| ||||||||||||||||||| |  || ||||||||||| || |||||||    
T  8226789 tcagaatcataggcttaagaagattgaatgttagtcccacccttaccttata-gatgaaaatcgcagcactcctaggtc 8226712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 40 - 179
Target Start/End: Complemental strand, 26923770 - 26923631
Alignment:
Q  40 acttttaacc-taattccccaatttctcaaaaactaat-cctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcc 137  Q
    |||||||||| |||||||| |||| ||||||||||||  |||||||| |||||||   |||  ||||||| |  |||||||||  |||| ||| ||||||    
T  26923770 acttttaaccctaattcccaaatt-ctcaaaaactaaaacctacaacatgttaaattcaattttcagaatcaatgacttaagattattgaatgttagtcc 26923672  T
Q  138 cacccttaccttagataatcaaaatcgcagcccttctaggtc 179  Q
    ||||||||||||| |  || ||||||||||| || |||||||    
T  26923671 cacccttaccttata-gatgaaaatcgcagcactcctaggtc 26923631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 132 - 213
Target Start/End: Complemental strand, 28495688 - 28495609
Alignment:
Q  132 tagtcccacccttaccttagataatcaaaatcgcagcccttctaggtcctcttcccttttcttgacttttctcccttttctc 213  Q
    ||||| ||||||||||||| | ||| ||||||||||| || |||||| ||  |||||| ||||| |||||||||||||||||    
T  28495688 tagtctcacccttacctta-acaatgaaaatcgcagctct-ctaggtgcttctcccttctcttggcttttctcccttttctc 28495609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 115 - 210
Target Start/End: Original strand, 18231684 - 18231780
Alignment:
Q  115 ttaagaaaattggatgctagtcccacccttaccttagataatcaaaatc-gcagcccttctaggtcctcttcccttttcttgacttttctccctttt 210  Q
    |||||||||||| ||| ||| | |||||||||||||   |||| ||||| ||||||  ||| |||||||||| ||| || |||||||||||| ||||    
T  18231684 ttaagaaaattgaatgttagcctcacccttaccttaacaaatcgaaatcggcagcctctcttggtcctcttctcttctcatgacttttctccttttt 18231780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 62 - 150
Target Start/End: Original strand, 18914879 - 18914966
Alignment:
Q  62 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctta 150  Q
    |||||||||||||| |||||||| |||||||   |||  ||||||| ||||| | ||||  |||| ||| |||||||||||||||||||    
T  18914879 ttctcaaaaactaaacctacaacatgttaaatacaattttcagaatcataga-tcaagattattgaatgttagtcccacccttacctta 18914966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 101 - 153
Target Start/End: Original strand, 25739324 - 25739376
Alignment:
Q  101 tcagaattatagacttaagaaaattggatgctagtcccacccttaccttagat 153  Q
    ||||||| ||||||||||||  | || ||| ||||||||||||||||||||||    
T  25739324 tcagaatcatagacttaagatcactgaatgatagtcccacccttaccttagat 25739376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 132 - 213
Target Start/End: Complemental strand, 27415175 - 27415094
Alignment:
Q  132 tagtcccacccttaccttagataatcaaaatcgcagcccttctaggtcctcttcc-cttttcttgac-ttttctcccttttctc 213  Q
    ||||| ||||||||||||| | ||| ||||||||||||  |||||||| ||| || ||| ||||||| ||||||||||||||||    
T  27415175 tagtctcacccttaccttaaagaataaaaatcgcagcc--tctaggtcttctccctcttctcttgactttttctcccttttctc 27415094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 101 - 169
Target Start/End: Original strand, 27557665 - 27557733
Alignment:
Q  101 tcagaattatagacttaagaaaattggatgctagtcccacccttaccttagataatcaaaatcgcagcc 169  Q
    ||||||| |||| |||||||| |||| ||| ||||| |||||||| |||| | ||| ||||||||||||    
T  27557665 tcagaatcataggcttaagaagattgaatgttagtctcacccttagcttaaagaatgaaaatcgcagcc 27557733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 66; Significance: 3e-29; HSPs: 65)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 138 - 215
Target Start/End: Complemental strand, 2037705 - 2037628
Alignment:
Q  138 cacccttaccttagataatcaaaatcgcagcccttctaggtcctcttcccttttcttgacttttctcccttttctctg 215  Q
    |||||||||||||||||||| |||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||    
T  2037705 cacccttaccttagataatcgaaatcgcagcccttcttggttctcttcccttttcttgacttttctcccttttctctg 2037628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 138 - 215
Target Start/End: Complemental strand, 2041446 - 2041369
Alignment:
Q  138 cacccttaccttagataatcaaaatcgcagcccttctaggtcctcttcccttttcttgacttttctcccttttctctg 215  Q
    |||||||||||||||||||| |||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||    
T  2041446 cacccttaccttagataatcgaaatcgcagcccttcttggttctcttcccttttcttgacttttctcccttttctctg 2041369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 138 - 215
Target Start/End: Complemental strand, 10988824 - 10988747
Alignment:
Q  138 cacccttaccttagataatcaaaatcgcagcccttctaggtcctcttcccttttcttgacttttctcccttttctctg 215  Q
    |||||||||||| ||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  10988824 cacccttaccttcgataatcgaaatcgcaacccttctaggtcctcttcccttttcttgacttttctcccttttctctg 10988747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 138 - 215
Target Start/End: Original strand, 14039082 - 14039159
Alignment:
Q  138 cacccttaccttagataatcaaaatcgcagcccttctaggtcctcttcccttttcttgacttttctcccttttctctg 215  Q
    |||||||||||||||||||| |||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||    
T  14039082 cacccttaccttagataatcgaaatcgcagcccttcttggttctcttcccttttcttgacttttctcccttttctctg 14039159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 138 - 215
Target Start/End: Original strand, 14042550 - 14042627
Alignment:
Q  138 cacccttaccttagataatcaaaatcgcagcccttctaggtcctcttcccttttcttgacttttctcccttttctctg 215  Q
    |||||||||||||||||||| |||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||    
T  14042550 cacccttaccttagataatcgaaatcgcagcccttcttggttctcttcccttttcttgacttttctcccttttctctg 14042627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 138 - 215
Target Start/End: Original strand, 39231629 - 39231706
Alignment:
Q  138 cacccttaccttagataatcaaaatcgcagcccttctaggtcctcttcccttttcttgacttttctcccttttctctg 215  Q
    |||||||||||||||||||| |||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||    
T  39231629 cacccttaccttagataatcgaaatcgcagcccttcttggttctcttcccttttcttgacttttctcccttttctctg 39231706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 138 - 215
Target Start/End: Original strand, 54974288 - 54974365
Alignment:
Q  138 cacccttaccttagataatcaaaatcgcagcccttctaggtcctcttcccttttcttgacttttctcccttttctctg 215  Q
    |||||||||||||||||||| |||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||    
T  54974288 cacccttaccttagataatcgaaatcgcagcccttcttggttctcttcccttttcttgacttttctcccttttctctg 54974365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 138 - 215
Target Start/End: Original strand, 54976898 - 54976975
Alignment:
Q  138 cacccttaccttagataatcaaaatcgcagcccttctaggtcctcttcccttttcttgacttttctcccttttctctg 215  Q
    |||||||||||||||||||| |||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||    
T  54976898 cacccttaccttagataatcgaaatcgcagcccttcttggttctcttcccttttcttgacttttctcccttttctctg 54976975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 138 - 215
Target Start/End: Original strand, 54979508 - 54979585
Alignment:
Q  138 cacccttaccttagataatcaaaatcgcagcccttctaggtcctcttcccttttcttgacttttctcccttttctctg 215  Q
    |||||||||||||||||||| |||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||    
T  54979508 cacccttaccttagataatcgaaatcgcagcccttcttggttctcttcccttttcttgacttttctcccttttctctg 54979585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 43 - 168
Target Start/End: Original strand, 43927952 - 43928076
Alignment:
Q  43 tttaacctaattccccaatttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccaccc 142  Q
    ||||||||||||| | |||| ||||| |||||||||||||||||||||||   || ||||||||||| |||||||| || |||| ||||||||| |||||    
T  43927952 tttaacctaattctcaaatt-ctcaataactaatcctacaacttgttaaatacaaccatcagaattacagacttaataagattgaatgctagtctcaccc 43928050  T
Q  143 ttaccttagataatcaaaatcgcagc 168  Q
    |||||||||| |||| ||||||||||    
T  43928051 ttaccttagaaaatcgaaatcgcagc 43928076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 138 - 215
Target Start/End: Complemental strand, 2034198 - 2034121
Alignment:
Q  138 cacccttaccttagataatcaaaatcgcagcccttctaggtcctcttcccttttcttgacttttctcccttttctctg 215  Q
    |||||||||||||||||||| |||||||||||||||  ||| ||||||||||||||||||||||||||| ||||||||    
T  2034198 cacccttaccttagataatcgaaatcgcagcccttcctggttctcttcccttttcttgacttttctcccctttctctg 2034121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 138 - 215
Target Start/End: Complemental strand, 602856 - 602779
Alignment:
Q  138 cacccttaccttagataatcaaaatcgcagcccttctaggtcctcttcccttttcttgacttttctcccttttctctg 215  Q
    |||||||||||||| ||||| || ||||| ||| ||| ||||||||||||||||||||||||||||||||||||||||    
T  602856 cacccttaccttagttaatcgaagtcgcaacccctcttggtcctcttcccttttcttgacttttctcccttttctctg 602779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 138 - 214
Target Start/End: Original strand, 7633269 - 7633345
Alignment:
Q  138 cacccttaccttagataatcaaaatcgcagcccttctaggtcctcttcccttttcttgacttttctcccttttctct 214  Q
    |||||||||| ||| ||||| || ||||||||| ||| |||||||||||||||||||||||||||||||||||||||    
T  7633269 cacccttaccatagttaatcgaagtcgcagcccctcttggtcctcttcccttttcttgacttttctcccttttctct 7633345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 62 - 150
Target Start/End: Original strand, 9578509 - 9578597
Alignment:
Q  62 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctta 150  Q
    |||| ||||||||| |||||||| ||||||| |||||||||||||| |||| |||||||| |||| ||| |||||||||||||||||||    
T  9578509 ttctaaaaaactaaccctacaacatgttaaatctaatcatcagaatcataggcttaagaagattgaatgttagtcccacccttacctta 9578597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 43 - 150
Target Start/End: Original strand, 325025 - 325130
Alignment:
Q  43 tttaacctaattccccaatttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccaccc 142  Q
    ||||||||||||| |||||| ||||||| |||| ||| |||| ||||||| ||||| |||||||| |||| |||||||| |||| |||||||||||||||    
T  325025 tttaacctaattctccaatt-ctcaaaa-ctaaacctccaacatgttaaatctaattatcagaatcataggcttaagaagattgaatgctagtcccaccc 325122  T
Q  143 ttacctta 150  Q
    ||||||||    
T  325123 ttacctta 325130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 43 - 150
Target Start/End: Original strand, 12386275 - 12386381
Alignment:
Q  43 tttaacctaattccccaatttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccaccc 142  Q
    ||||||||||||| | |||| ||||||||||||||||||||| |||||||   || ||||| ||| |||||||||| | ||||| |||||||||||||||    
T  12386275 tttaacctaattctcaaatt-ctcaaaaactaatcctacaacgtgttaaatacaaccatcaaaatcatagacttaatagaattgaatgctagtcccaccc 12386373  T
Q  143 ttacctta 150  Q
    ||||||||    
T  12386374 ttacctta 12386381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 56 - 213
Target Start/End: Original strand, 19039459 - 19039614
Alignment:
Q  56 cccaatttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttaccttagataa 155  Q
    ||||| ||||| |||||  |||||||| ||||||||| |||||||||||||||| |||||||| | ||||| ||||||||| |||||||||||||||  |    
T  19039459 cccaaattctctaaaacccatcctaca-cttgttaaatctaatcatcagaattacagacttaatagaattgaatgctagtctcacccttaccttagaata 19039557  T
Q  156 tcaaaatcgcagcccttctaggtcctcttcccttttcttgac-ttttctcccttttctc 213  Q
      ||||||||||||  |||| || ||  |||||| ||||| | ||||||||||||||||    
T  19039558 agaaaatcgcagcc--tctatgtgcttctcccttctcttggctttttctcccttttctc 19039614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 68 - 150
Target Start/End: Original strand, 15207805 - 15207887
Alignment:
Q  68 aaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctta 150  Q
    |||||||| |||||||||||||||| ||||||||||||||||||   |||||||||||| ||| ||||| |||||||||||||    
T  15207805 aaaactaaacctacaacttgttaaatctaatcatcagaattataagtttaagaaaattgaatgttagtctcacccttacctta 15207887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 86 - 213
Target Start/End: Original strand, 13919756 - 13919886
Alignment:
Q  86 tgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctt--agataatcaaaatcgcagc-ccttctaggtcctc 182  Q
    ||||||| |||||||||||||||||   ||||||| ||||| ||| ||||| ||||||||||||  | | |||| ||||||||||  | ||||||| |||    
T  13919756 tgttaaatctaatcatcagaattatcagcttaagagaattgaatgttagtctcacccttaccttaaaaaaaatcgaaatcgcagcttcctctaggttctc 13919855  T
Q  183 ttcccttttcttgacttttctcccttttctc 213  Q
    ||| ||| |||||||||||||||||||||||    
T  13919856 ttctcttctcttgacttttctcccttttctc 13919886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 74 - 169
Target Start/End: Original strand, 23275541 - 23275635
Alignment:
Q  74 aatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttaccttagataatcaaaatcgcagcc 169  Q
    ||||||||| |||||||||  ||||||||||||||| |||||||| | ||||| ||||||||| |||||||||||||||  || ||||||||||||    
T  23275541 aatcctaca-cttgttaaatttaatcatcagaattacagacttaatagaattgaatgctagtctcacccttaccttagaatatgaaaatcgcagcc 23275635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 64 - 151
Target Start/End: Complemental strand, 32402268 - 32402181
Alignment:
Q  64 ctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttaccttag 151  Q
    |||||||||||| ||||| || ||||||| |||||||||||||||| |  ||||||| ||||| ||| ||||||||||||||||||||    
T  32402268 ctcaaaaactaaacctacgacatgttaaatctaatcatcagaattacaagcttaagagaattgaatgttagtcccacccttaccttag 32402181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 138 - 212
Target Start/End: Complemental strand, 15009373 - 15009299
Alignment:
Q  138 cacccttaccttagataatcaaaatcgcagcccttctaggtcctcttcccttttcttgacttttctcccttttct 212  Q
    |||||||||||||| ||||| || ||||| ||| ||| ||||||||||||||||||| |||||||||||||||||    
T  15009373 cacccttaccttagttaatcgaagtcgcaacccctcttggtcctcttcccttttctttacttttctcccttttct 15009299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 42 - 152
Target Start/End: Original strand, 44495482 - 44495590
Alignment:
Q  42 ttttaacctaattccccaatttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacc 141  Q
    |||||||||||||| |||||| ||||||| |||| ||| |||  ||||||| ||||| |||| ||| ||||||||||||| |||| ||| ||||||||||    
T  44495482 ttttaacctaattctccaatt-ctcaaaa-ctaaacctccaatatgttaaatctaattatcataatcatagacttaagaagattgaatgttagtcccacc 44495579  T
Q  142 cttaccttaga 152  Q
    |||||||||||    
T  44495580 cttaccttaga 44495590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 62 - 213
Target Start/End: Original strand, 17738145 - 17738294
Alignment:
Q  62 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttaccttagataatcaaaa 161  Q
    ||||| ||||| ||||||||| ||| |||||  ||||||||||||||| |||||||| | ||||| ||||||||| |||||||||||||||  |  ||||    
T  17738145 ttctctaaaaccaatcctaca-cttattaaatttaatcatcagaattacagacttaatagaattgaatgctagtctcacccttaccttagaataagaaaa 17738243  T
Q  162 tcgcagcccttctaggtcctcttcccttttcttgac-ttttctcccttttctc 213  Q
    ||||||||  |||| || ||  |||||| ||||| | ||||||||||||||||    
T  17738244 tcgcagcc--tctatgtgcttctcccttctcttggctttttctcccttttctc 17738294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 68 - 126
Target Start/End: Original strand, 15266050 - 15266108
Alignment:
Q  68 aaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattg 126  Q
    |||||||| |||||||||||||||| ||||||||||||||||||  |||||||||||||    
T  15266050 aaaactaaacctacaacttgttaaatctaatcatcagaattataagcttaagaaaattg 15266108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 84 - 212
Target Start/End: Original strand, 36167535 - 36167662
Alignment:
Q  84 cttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttaccttagataatcaaaatcgcagcccttctaggtcctct 183  Q
    |||||||||  |||||||||| |||| |||||||| || |||| ||| ||||| ||||||||||||| | |||||||||||||| | | ||||||| | |    
T  36167535 cttgttaaatttaatcatcaggattacagacttaataagattgaatgttagtctcacccttacctta-acaatcaaaatcgcag-cttcctaggtctttt 36167632  T
Q  184 tcccttttcttga-cttttctcccttttct 212  Q
    || ||| |||||| ||||||||||||||||    
T  36167633 tctcttctcttgaccttttctcccttttct 36167662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 86 - 150
Target Start/End: Original strand, 11202209 - 11202273
Alignment:
Q  86 tgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctta 150  Q
    ||||||| ||||| |||||||| ||||||||||||| |||| ||||||||| |||||||||||||    
T  11202209 tgttaaatctaattatcagaatcatagacttaagaagattgaatgctagtctcacccttacctta 11202273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 62 - 146
Target Start/End: Original strand, 28195495 - 28195578
Alignment:
Q  62 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttac 146  Q
    ||||| ||||| ||||||||| |||||||||  ||||||||||||||| |||||||| | ||||| ||||||||| |||||||||    
T  28195495 ttctctaaaaccaatcctaca-cttgttaaatttaatcatcagaattacagacttaatagaattgaatgctagtctcacccttac 28195578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 43 - 150
Target Start/End: Original strand, 21838320 - 21838425
Alignment:
Q  43 tttaacctaattccccaatttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccaccc 142  Q
    ||||||||||||| |||| | ||| |||| |||| ||||| |||||||||  ||||||||||||||| ||||| || | ||||| ||||||||| |||||    
T  21838320 tttaacctaattctccaact-ctctaaaattaattctaca-cttgttaaatttaatcatcagaattacagactcaatataattgaatgctagtctcaccc 21838417  T
Q  143 ttacctta 150  Q
    ||||||||    
T  21838418 ttacctta 21838425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 62 - 168
Target Start/End: Complemental strand, 13937382 - 13937276
Alignment:
Q  62 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttaccttagataatcaaaa 161  Q
    |||||||||||||| |||||||| |||||||   |||  ||||||| ||||||| ||||  |||| ||| |||||||||||||||||| ||  || ||||    
T  13937382 ttctcaaaaactaaacctacaacatgttaaatacaattttcagaatcatagactcaagattattgaatgttagtcccacccttaccttggaatataaaaa 13937283  T
Q  162 tcgcagc 168  Q
    |||||||    
T  13937282 tcgcagc 13937276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 62 - 168
Target Start/End: Original strand, 41124693 - 41124799
Alignment:
Q  62 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttaccttagataatcaaaa 161  Q
    |||||||||||||| |||||||| |||||||   |||  ||||||| ||||||| ||||  |||| ||| |||||||||||||||||| ||  || ||||    
T  41124693 ttctcaaaaactaaacctacaacatgttaaatacaattttcagaatcatagactcaagattattgaatgttagtcccacccttaccttggaatataaaaa 41124792  T
Q  162 tcgcagc 168  Q
    |||||||    
T  41124793 tcgcagc 41124799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 62 - 151
Target Start/End: Complemental strand, 12119273 - 12119184
Alignment:
Q  62 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttaccttag 151  Q
    |||||||||||||| |||||||| |||||||   |||  ||||||| ||||||| ||||  |||| ||| ||||||||||||||||||||    
T  12119273 ttctcaaaaactaaacctacaacatgttaaatacaattttcagaatcatagactcaagattattgaatgttagtcccacccttaccttag 12119184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 62 - 150
Target Start/End: Original strand, 10557692 - 10557779
Alignment:
Q  62 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctta 150  Q
    ||||| ||||| |||||||||  ||||||||  ||||||||||||||| |||||||| | ||||| ||||| ||| |||||||||||||    
T  10557692 ttctctaaaaccaatcctacag-ttgttaaatttaatcatcagaattacagacttaatagaattgaatgctggtctcacccttacctta 10557779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 101 - 157
Target Start/End: Complemental strand, 13522251 - 13522195
Alignment:
Q  101 tcagaattatagacttaagaaaattggatgctagtcccacccttaccttagataatc 157  Q
    ||||||| |||| |||||||| |||| |||||||||||||||||||||||| |||||    
T  13522251 tcagaatcataggcttaagaagattgaatgctagtcccacccttaccttagttaatc 13522195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 62 - 150
Target Start/End: Original strand, 24514237 - 24514325
Alignment:
Q  62 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctta 150  Q
    |||||||||||||| |||||||| |||||||   |||  ||||||| ||||||| ||||  |||| ||| |||||||||||||||||||    
T  24514237 ttctcaaaaactaaacctacaacatgttaaatacaattttcagaatcatagactcaagattattgaatgttagtcccacccttacctta 24514325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 96 - 168
Target Start/End: Complemental strand, 53300879 - 53300808
Alignment:
Q  96 aatcatcagaattatagacttaagaaaattggatgctagtcccacccttaccttagataatcaaaatcgcagc 168  Q
    |||||||||||||| |||||||| | ||||| ||||||||| ||| ||||||||| | |||||||||||||||    
T  53300879 aatcatcagaattacagacttaatagaattgaatgctagtctcactcttacctta-acaatcaaaatcgcagc 53300808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 95 - 150
Target Start/End: Complemental strand, 45219467 - 45219412
Alignment:
Q  95 taatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctta 150  Q
    ||||||||||||||| |||||||| || |||| ||||||||| |||||||||||||    
T  45219467 taatcatcagaattacagacttaataagattgaatgctagtctcacccttacctta 45219412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 101 - 171
Target Start/End: Original strand, 5224325 - 5224394
Alignment:
Q  101 tcagaattatagacttaagaaaattggatgctagtcccacccttaccttagataatcaaaatcgcagccct 171  Q
    ||||||| |||| |||||||| |||| ||| ||||||||||||||||||| |||  |||||||||||||||    
T  5224325 tcagaatcataggcttaagaagattgaatgttagtcccacccttacctta-atacacaaaatcgcagccct 5224394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 84 - 150
Target Start/End: Original strand, 21619386 - 21619452
Alignment:
Q  84 cttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctta 150  Q
    |||||||||  ||||||||||||||| |||||||| || |||| ||| ||||| |||||||||||||    
T  21619386 cttgttaaatttaatcatcagaattacagacttaataagattgaatgttagtctcacccttacctta 21619452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 101 - 213
Target Start/End: Complemental strand, 22146817 - 22146706
Alignment:
Q  101 tcagaattatagacttaagaaaattggatgctagtcccacccttaccttagataatcaaaatcgcagcccttctaggtcctcttcccttttcttgac-tt 199  Q
    ||||||| |||| |||||||| |||| ||| |||||||||||||||||||||  |  ||||||||||||  |||| || ||  |||||| ||||| | ||    
T  22146817 tcagaatcataggcttaagaagattgaatgttagtcccacccttaccttagaataagaaaatcgcagcc--tctatgtgcttctcccttctcttggcttt 22146720  T
Q  200 ttctcccttttctc 213  Q
    ||||||||||||||    
T  22146719 ttctcccttttctc 22146706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 62 - 167
Target Start/End: Complemental strand, 17444171 - 17444066
Alignment:
Q  62 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttaccttagataatcaaaa 161  Q
    |||||||||||||| |||||||| | |||||   |||  ||||||| ||||||| ||||  |||| ||| |||||||||||||||||| ||  || ||||    
T  17444171 ttctcaaaaactaaacctacaacatattaaatacaattttcagaatcatagactcaagattattgaatgttagtcccacccttaccttggaatataaaaa 17444072  T
Q  162 tcgcag 167  Q
    ||||||    
T  17444071 tcgcag 17444066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 40 - 179
Target Start/End: Original strand, 17464015 - 17464154
Alignment:
Q  40 acttttaacc-taattccccaatttctcaaaaactaat-cctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcc 137  Q
    |||||||||| |||||||| |||| ||||||||||||  |||||||| ||||||| | |||  ||||||| |  |||||||||  |||| ||| ||||||    
T  17464015 acttttaaccctaattcccaaatt-ctcaaaaactaaaacctacaacatgttaaatccaattttcagaatcaatgacttaagattattgaatgttagtcc 17464113  T
Q  138 cacccttaccttagataatcaaaatcgcagcccttctaggtc 179  Q
    ||||||||||||| |  || ||||||||||| || |||||||    
T  17464114 cacccttaccttata-gatgaaaatcgcagcactcctaggtc 17464154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 81 - 150
Target Start/End: Complemental strand, 24152455 - 24152386
Alignment:
Q  81 caacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctta 150  Q
    |||| ||||||| ||||| |||||||| |||| |||| ||| |||| ||| |||||||||||||||||||    
T  24152455 caacatgttaaatctaattatcagaatcataggcttaggaagattgaatgttagtcccacccttacctta 24152386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 40 - 179
Target Start/End: Original strand, 34160163 - 34160302
Alignment:
Q  40 acttttaacc-taattccccaatttctcaaaaactaat-cctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcc 137  Q
    |||||||||| |||||||| |||| ||||||||||||  |||||||| ||||||| | |||  ||||||| |  |||||||||  |||| ||| ||||||    
T  34160163 acttttaaccctaattcccaaatt-ctcaaaaactaaaacctacaacatgttaaatccaattttcagaatcaatgacttaagattattgaatgttagtcc 34160261  T
Q  138 cacccttaccttagataatcaaaatcgcagcccttctaggtc 179  Q
    ||||||||||||| |  || ||||||||||| || |||||||    
T  34160262 cacccttaccttata-gatgaaaatcgcagcactcctaggtc 34160302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 68 - 152
Target Start/End: Complemental strand, 605603 - 605520
Alignment:
Q  68 aaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttaccttaga 152  Q
    ||||| ||||||||| ||||||||| |||||||||| | ||||| | |||| | ||||  ||||||||| |||||||||||||||    
T  605603 aaaaccaatcctaca-cttgttaaatctaatcatcatagttatatagttaatagaattaaatgctagtctcacccttaccttaga 605520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 40 - 179
Target Start/End: Complemental strand, 13151113 - 13150974
Alignment:
Q  40 acttttaacctaattccccaatttctcaaaaactaat-cctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtccc 138  Q
    ||||||||||| | | ||||| ||||||||||||||  |||||||| ||||||| | |||  |||||||    |||||||||  |||| ||| |||||||    
T  13151113 acttttaaccttaattcccaaattctcaaaaactaaaacctacaacatgttaaatccaattttcagaatcgatgacttaagattattgaatgttagtccc 13151014  T
Q  139 acccttaccttagataatcaaaatcgcagcccttctaggtc 179  Q
    |||||||||||| |  || ||||||||||| || |||||||    
T  13151013 acccttaccttata-gatgaaaatcgcagcactcctaggtc 13150974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 40 - 179
Target Start/End: Complemental strand, 13153581 - 13153442
Alignment:
Q  40 acttttaacctaattccccaatttctcaaaaactaat-cctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtccc 138  Q
    ||||||||||| | | ||||| ||||||||||||||  |||||||| ||||||| | |||  |||||||    |||||||||  |||| ||| |||||||    
T  13153581 acttttaaccttaattcccaaattctcaaaaactaaaacctacaacatgttaaatccaattttcagaatcgatgacttaagattattgaatgttagtccc 13153482  T
Q  139 acccttaccttagataatcaaaatcgcagcccttctaggtc 179  Q
    |||||||||||| |  || ||||||||||| || |||||||    
T  13153481 acccttaccttata-gatgaaaatcgcagcactcctaggtc 13153442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 40 - 213
Target Start/End: Original strand, 15978372 - 15978545
Alignment:
Q  40 acttttaacc-taattccccaatttctcaaaaactaat-cctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcc 137  Q
    |||||||||| |||||||| |||| ||||||||| ||  |||||||| ||||||| | |||  ||||||| |  |||||||||  |||| ||| ||||||    
T  15978372 acttttaaccctaattcccaaatt-ctcaaaaacgaaaacctacaacatgttaaatccaattttcagaatcaatgacttaagattattgaatgttagtcc 15978470  T
Q  138 cacccttaccttagataatcaaaatcgcagcccttctaggtcctcttcccttttcttgac-ttttctcccttttctc 213  Q
    ||||||||||||| | | |||||||||| | | ||||||||| |  |||||| ||||| | ||||||||||||||||    
T  15978471 cacccttaccttata-actcaaaatcgccg-ctttctaggtctttctcccttctcttggctttttctcccttttctc 15978545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 62 - 150
Target Start/End: Complemental strand, 20629600 - 20629512
Alignment:
Q  62 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctta 150  Q
    |||||||||||||| |||||||  |||||||   |||  ||||||| ||||||| ||||  |||| ||| |||||||||||||||||||    
T  20629600 ttctcaaaaactaaacctacaatatgttaaatacaattttcagaatcatagactcaagattattgaatgttagtcccacccttacctta 20629512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 100 - 168
Target Start/End: Complemental strand, 22109531 - 22109464
Alignment:
Q  100 atcagaattatagacttaagaaaattggatgctagtcccacccttaccttagataatcaaaatcgcagc 168  Q
    |||||||||| |||||||| | ||||| | | ||||| ||||||||||||||| |||||||||||||||    
T  22109531 atcagaattacagacttaatataattgtaagttagtctcacccttaccttaga-aatcaaaatcgcagc 22109464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 99 - 213
Target Start/End: Complemental strand, 37250369 - 37250255
Alignment:
Q  99 catcagaattatag-acttaagaaaattggatgctagtcccacccttaccttagataatcaaaatcgcagcccttctaggtcctcttcccttttcttgac 197  Q
    |||||||||||||  |||||| | ||||| ||| ||||| ||||||||||||||| |||  |||||||||| | |||||||| ||||||||| ||||| |    
T  37250369 catcagaattatactacttaatagaattgaatgttagtctcacccttaccttaga-aattgaaatcgcagctc-tctaggtcttcttcccttctcttggc 37250272  T
Q  198 -ttttctcccttttctc 213  Q
     |||||| |||||||||    
T  37250271 tttttcttccttttctc 37250255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 69 - 201
Target Start/End: Original strand, 50243782 - 50243912
Alignment:
Q  69 aaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttaccttagataatcaaaatcgcagc 168  Q
    ||||||| ||| |||| ||||||| ||||| || ||||| | || |||||||| |||| ||| ||||| ||||||||||||| | ||| |||||||||||    
T  50243782 aaactaaacctccaacatgttaaatctaattatgagaatcacaggcttaagaagattgaatgttagtctcacccttacctta-acaatgaaaatcgcagc 50243880  T
Q  169 ccttctaggtcctcttcccttttcttgactttt 201  Q
     | ||||||| ||  |||||| ||||| |||||    
T  50243881 tc-tctaggtgcttctcccttctcttggctttt 50243912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 62 - 150
Target Start/End: Complemental strand, 55318712 - 55318624
Alignment:
Q  62 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctta 150  Q
    |||||||||||||| | |||||| |||||||   |||  ||||||| ||||||| ||||  |||| ||| |||||||||||||||||||    
T  55318712 ttctcaaaaactaaacttacaacatgttaaatacaattttcagaatcatagactcaagattattgaatgttagtcccacccttacctta 55318624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 56 - 150
Target Start/End: Complemental strand, 6468443 - 6468348
Alignment:
Q  56 cccaatttctcaaaaactaat-cctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctta 150  Q
    ||||| ||||||||||||||  |||||||| ||||||| |||||  ||||||| |  |||||||||  |||| ||| || ||||||||||||||||    
T  6468443 cccaaattctcaaaaactaaaacctacaacatgttaaatctaattttcagaatcaatgacttaagattattgaatgttactcccacccttacctta 6468348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 57 - 179
Target Start/End: Complemental strand, 10247030 - 10246908
Alignment:
Q  57 ccaatttctcaaaaactaat-cctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttaccttagataa 155  Q
    |||| ||||||||||||||  |||||||| ||||||| | |||  ||||||| |  |||||||||  |||| ||| ||||||||||||||||||| |  |    
T  10247030 ccaaattctcaaaaactaaaacctacaacatgttaaatccaattttcagaatcaatgacttaagattattgaatgttagtcccacccttaccttata-ga 10246932  T
Q  156 tcaaaatcgcagcccttctaggtc 179  Q
    | ||||||||||| || |||||||    
T  10246931 tgaaaatcgcagcactcctaggtc 10246908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 101 - 168
Target Start/End: Complemental strand, 26054484 - 26054417
Alignment:
Q  101 tcagaattatagacttaagaaaattggatgctagtcccacccttaccttagataatcaaaatcgcagc 168  Q
    ||||||| |||| |||||||| |||| ||| ||||| ||||||||||||| | ||| |||||||||||    
T  26054484 tcagaatcataggcttaagaatattgaatgttagtctcacccttaccttaaagaatgaaaatcgcagc 26054417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 132 - 213
Target Start/End: Original strand, 15618252 - 15618333
Alignment:
Q  132 tagtcccacccttaccttagataatca--aaatcgcagcccttctaggtcctcttcc-cttttcttgacttttctcccttttctc 213  Q
    ||||| |||||||||||||  ||||||  |||||||||||| |||||||| ||| || ||| |||||||||||||||||||||||    
T  15618252 tagtctcacccttacctta--taatcaggaaatcgcagcccctctaggtc-tctccctcttctcttgacttttctcccttttctc 15618333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 62 - 168
Target Start/End: Complemental strand, 16282166 - 16282060
Alignment:
Q  62 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttaccttagataatcaaaa 161  Q
    |||||||||||||| |||||||| | |||||   |||  ||||||| ||||||| ||||  |||| ||| ||||| |||||||||||| ||  || ||||    
T  16282166 ttctcaaaaactaaacctacaacatattaaatacaattttcagaatcatagactcaagattattgaatgttagtctcacccttaccttggaatataaaaa 16282067  T
Q  162 tcgcagc 168  Q
    |||||||    
T  16282066 tcgcagc 16282060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 101 - 151
Target Start/End: Complemental strand, 37641553 - 37641503
Alignment:
Q  101 tcagaattatagacttaagaaaattggatgctagtcccacccttaccttag 151  Q
    ||||||| |||| |||||||| |||| ||| ||||||||||||||||||||    
T  37641553 tcagaatcataggcttaagaagattgaatgttagtcccacccttaccttag 37641503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 67 - 168
Target Start/End: Complemental strand, 38961240 - 38961139
Alignment:
Q  67 aaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttaccttagataatcaaaatcgca 166  Q
    ||||||||| |||||||| |||||||   |||  ||||||| ||||||| ||||  |||| ||| ||||| |||||||||||| ||  || |||||||||    
T  38961240 aaaaactaaacctacaacatgttaaatacaattttcagaatcatagactcaagattattgaatgttagtctcacccttaccttggaatataaaaatcgca 38961141  T
Q  167 gc 168  Q
    ||    
T  38961140 gc 38961139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 40 - 179
Target Start/End: Original strand, 55477329 - 55477468
Alignment:
Q  40 acttttaacc-taattccccaatttctcaaaaactaat-cctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcc 137  Q
    |||||||||| |||||||| |||| ||||||||||||  |||||||| ||||||| | |||  ||||||| |  |||||||||  |||| ||| |||||     
T  55477329 acttttaaccctaattcccaaatt-ctcaaaaactaaaacctacaacatgttaaatccaattttcagaatcaatgacttaagattattgaatgttagtct 55477427  T
Q  138 cacccttaccttagataatcaaaatcgcagcccttctaggtc 179  Q
    ||||||||||||| |  || ||||||||||| || |||||||    
T  55477428 cacccttaccttata-gatgaaaatcgcagcactcctaggtc 55477468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 62 - 150
Target Start/End: Original strand, 10379893 - 10379981
Alignment:
Q  62 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctta 150  Q
    ||||||||||||||  ||||||| | |||||   |||  ||||||| ||||||| ||||  |||| ||| |||||||||||||||||||    
T  10379893 ttctcaaaaactaaatctacaacatattaaatacaattttcagaatcatagactcaagattattgaatgttagtcccacccttacctta 10379981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 101 - 153
Target Start/End: Complemental strand, 16828330 - 16828278
Alignment:
Q  101 tcagaattatagacttaagaaaattggatgctagtcccacccttaccttagat 153  Q
    ||||||| ||||||||||||  | || ||| ||||||||||||||||||||||    
T  16828330 tcagaatcatagacttaagatcactgaatgatagtcccacccttaccttagat 16828278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 114 - 213
Target Start/End: Complemental strand, 23317973 - 23317873
Alignment:
Q  114 cttaagaaaattggatgctagtcccacccttaccttagataatcaaaatcgcagccct-tctaggtcctcttcccttttcttgacttttctcccttttct 212  Q
    ||||||| ||||| ||| ||||| |||||||||||||   |||| |||||| |  ||| ||| ||| |||||| ||| |||||||||||||||| |||||    
T  23317973 cttaagagaattgaatgttagtctcacccttaccttaacaaatcgaaatcggaagcctctcttggttctcttctcttctcttgacttttctcccctttct 23317874  T
Q  213 c 213  Q
    |    
T  23317873 c 23317873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 40 - 213
Target Start/End: Complemental strand, 45577766 - 45577593
Alignment:
Q  40 acttttaacc-taattccccaatttctcaaaaactaat-cctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcc 137  Q
    |||||||||| |||||||| |||| ||||||||||||  |||||||| ||||||| | |||  ||||||| |   ||||||||  |||| ||| |||||     
T  45577766 acttttaaccctaattcccaaatt-ctcaaaaactaaaacctacaacatgttaaatccaattttcagaatcaattacttaagattattgaatgttagtct 45577668  T
Q  138 cacccttaccttagataatcaaaatcgcagcccttctaggtcctcttcccttttcttgac-ttttctcccttttctc 213  Q
    ||||||||||||| | | |||||||||| | | ||||||||| |  |||||| ||||| | ||||||||||||||||    
T  45577667 cacccttaccttata-actcaaaatcgccg-ctttctaggtctttctcccttctcttggctttttctcccttttctc 45577593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 65; Significance: 1e-28; HSPs: 3)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 62 - 210
Target Start/End: Complemental strand, 128185 - 128038
Alignment:
Q  62 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttaccttagataatcaaaa 161  Q
    ||||| ||||||||||||||| |||||||||  ||||||||||||||| | |||||| || |||| |||||| || ||||||||||||||| |||| |||    
T  128185 ttctctaaaactaatcctaca-cttgttaaatttaatcatcagaattacaaacttaataagattgaatgctaatctcacccttaccttagaaaatcgaaa 128087  T
Q  162 tcgcagcccttctaggtcctcttcccttttcttgacttttctccctttt 210  Q
    ||||| ||  ||| |||||||||| ||| ||||||||||||||| ||||    
T  128086 tcgcaacctctcttggtcctcttctcttctcttgacttttctccttttt 128038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 99 - 201
Target Start/End: Original strand, 81191 - 81291
Alignment:
Q  99 catcagaattatagacttaagaaaattggatgctagtcccacccttaccttagataatcaaaatcgcagcccttctaggtcctcttcccttttcttgact 198  Q
    ||||||||||| || ||||| | ||||| ||||||||| ||||||||||||||| | || |||||||||| | |||||||||||||| ||| ||||| ||    
T  81191 catcagaattacagccttaatagaattgaatgctagtctcacccttaccttaga-attcgaaatcgcagctc-tctaggtcctcttctcttctcttggct 81288  T
Q  199 ttt 201  Q
    |||    
T  81289 ttt 81291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 95 - 213
Target Start/End: Original strand, 117445 - 117562
Alignment:
Q  95 taatcatcagaattatagacttaagaaaattggatgctagtcccacccttaccttagataatcaaaatcgcagcccttctaggtcctcttcccttttctt 194  Q
    ||||||||| ||||| |||||||| || |||| ||| ||||| ||||||||||||| | | |||||||||| | | ||||||||| |  |||||| ||||    
T  117445 taatcatcataattacagacttaataagattgaatgttagtctcacccttaccttata-actcaaaatcgccg-ctttctaggtctttctcccttctctt 117542  T
Q  195 gac-ttttctcccttttctc 213  Q
    | | ||||||||||||||||    
T  117543 ggctttttctcccttttctc 117562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0395 (Bit Score: 62; Significance: 6e-27; HSPs: 1)
Name: scaffold0395
Description:

Target: scaffold0395; HSP #1
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 138 - 215
Target Start/End: Complemental strand, 7757 - 7680
Alignment:
Q  138 cacccttaccttagataatcaaaatcgcagcccttctaggtcctcttcccttttcttgacttttctcccttttctctg 215  Q
    |||||||||||| ||||||| |||||||||||||||| |||||||||| |||||||||||||||||||||||||||||    
T  7757 cacccttaccttcgataatcgaaatcgcagcccttcttggtcctcttctcttttcttgacttttctcccttttctctg 7680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090 (Bit Score: 62; Significance: 6e-27; HSPs: 1)
Name: scaffold0090
Description:

Target: scaffold0090; HSP #1
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 68 - 205
Target Start/End: Original strand, 2902 - 3038
Alignment:
Q  68 aaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttaccttagataatcaaaatcgcag 167  Q
    ||||||||||||||| |||||||||  ||||||||||||||| |||||||| || |||| ||||||||| |||||||||||||   |||| |||||| ||    
T  2902 aaaactaatcctaca-cttgttaaatttaatcatcagaattaaagacttaataagattgaatgctagtctcacccttaccttaagaaatcgaaatcgaag 3000  T
Q  168 cccttctaggtcctcttcccttttcttgacttttctcc 205  Q
    ||  ||| |||||||||| ||| |||||||||||||||    
T  3001 cctctcttggtcctcttctcttctcttgacttttctcc 3038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0131 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0131
Description:

Target: scaffold0131; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 138 - 215
Target Start/End: Original strand, 2620 - 2696
Alignment:
Q  138 cacccttaccttagataatcaaaatcgcagcccttctaggtcctcttcccttttcttgacttttctcccttttctctg 215  Q
    ||||||||||||||| | || ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  2620 cacccttaccttagaaagtcgaaatcgcagccct-ctaggtcctcttcccttttcttgacttttctcccttttctctg 2696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 57; Significance: 6e-24; HSPs: 5)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 62 - 150
Target Start/End: Original strand, 447377 - 447465
Alignment:
Q  62 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctta 150  Q
    |||||||||||||| |||||||| ||||||| |||||||||||||| |||| |||||||| |||| ||| |||||||||||||||||||    
T  447377 ttctcaaaaactaaccctacaacatgttaaatctaatcatcagaatcataggcttaagaagattgaatgttagtcccacccttacctta 447465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 62 - 150
Target Start/End: Original strand, 498287 - 498375
Alignment:
Q  62 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctta 150  Q
    |||||||||||||| |||||||| ||||||| |||||||||||||| |||| |||||||| |||| ||| |||||||||| ||||||||    
T  498287 ttctcaaaaactaaccctacaacatgttaaatctaatcatcagaatcataggcttaagaagattgaatgttagtcccaccattacctta 498375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #3
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 43 - 149
Target Start/End: Complemental strand, 84560 - 84457
Alignment:
Q  43 tttaacctaattccccaatttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccaccc 142  Q
    ||||||||||||| |||| ||| |  ||| |||||||||  |||||||||| ||||||||||||||| |||||||| || |||| ||||||||| |||||    
T  84560 tttaacctaattctccaacttc-cttaaattaatcctact-cttgttaaag-taatcatcagaattacagacttaataagattgaatgctagtctcaccc 84464  T
Q  143 ttacctt 149  Q
    |||||||    
T  84463 ttacctt 84457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 62 - 153
Target Start/End: Original strand, 501818 - 501909
Alignment:
Q  62 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttaccttagat 153  Q
    |||||||||||||| |||||||| |||||||   |||  ||||||| ||||||| ||||  |||| ||| |||| |||| ||||||||||||    
T  501818 ttctcaaaaactaaacctacaacatgttaaatacaattttcagaatcatagactcaagattattgaatgttagtaccacacttaccttagat 501909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #5
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 101 - 153
Target Start/End: Complemental strand, 152160 - 152108
Alignment:
Q  101 tcagaattatagacttaagaaaattggatgctagtcccacccttaccttagat 153  Q
    ||||||||||| ||||||||  | || ||| ||||||||||||||||||||||    
T  152160 tcagaattataaacttaagattactgaatgatagtcccacccttaccttagat 152108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0357 (Bit Score: 56; Significance: 2e-23; HSPs: 2)
Name: scaffold0357
Description:

Target: scaffold0357; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 43 - 150
Target Start/End: Original strand, 4811 - 4917
Alignment:
Q  43 tttaacctaattccccaatttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccaccc 142  Q
    ||||||||||||| | |||| ||||||||||||||||||||| |||||||   || ||||||||| |||||||||| | ||||| |||||||||||||||    
T  4811 tttaacctaattctcaaatt-ctcaaaaactaatcctacaacctgttaaatacaaccatcagaatcatagacttaatagaattgaatgctagtcccaccc 4909  T
Q  143 ttacctta 150  Q
    ||||||||    
T  4910 ttacctta 4917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0357; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 122 - 171
Target Start/End: Original strand, 14096 - 14144
Alignment:
Q  122 aattggatgctagtcccacccttaccttagataatcaaaatcgcagccct 171  Q
    ||||| ||||||||| ||||||||||||||| ||||||||||||||||||    
T  14096 aattgaatgctagtctcacccttaccttaga-aatcaaaatcgcagccct 14144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1419 (Bit Score: 55; Significance: 9e-23; HSPs: 1)
Name: scaffold1419
Description:

Target: scaffold1419; HSP #1
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 64 - 150
Target Start/End: Original strand, 923 - 1008
Alignment:
Q  64 ctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctta 150  Q
    |||||||||||| |||||| | ||||||| |||||||||| |||||||||||||||||||||| |||||||||||| ||||||||||    
T  923 ctcaaaaactaaacctaca-catgttaaatctaatcatcataattatagacttaagaaaattgaatgctagtcccagccttacctta 1008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0169 (Bit Score: 55; Significance: 9e-23; HSPs: 1)
Name: scaffold0169
Description:

Target: scaffold0169; HSP #1
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 68 - 150
Target Start/End: Complemental strand, 28778 - 28696
Alignment:
Q  68 aaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctta 150  Q
    |||||||| |||||||||||||||| |||||||||||||||| || |||||||| |||| ||| |||||||||||||||||||    
T  28778 aaaactaaacctacaacttgttaaatctaatcatcagaattaaaggcttaagaagattgaatgttagtcccacccttacctta 28696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0750 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0750
Description:

Target: scaffold0750; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 68 - 213
Target Start/End: Original strand, 4507 - 4655
Alignment:
Q  68 aaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctta--gataatcaaaatc-g 164  Q
    ||||| || |||||||||||||||| ||||||||||||||||||  ||||||||||||| ||| |||||  ||||||||||||   | |||| ||||| |    
T  4507 aaaacaaaacctacaacttgttaaatctaatcatcagaattataagcttaagaaaattgaatgttagtctgacccttaccttaatcaaaatcgaaatcgg 4606  T
Q  165 cagcccttctaggtcctcttcccttttcttgacttttctcccttttctc 213  Q
    |||||  ||| ||| || ||| ||| |||||||||||||||||||||||    
T  4607 cagcctctcttggttcttttctcttctcttgacttttctcccttttctc 4655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 54; Significance: 4e-22; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 62 - 151
Target Start/End: Complemental strand, 191886 - 191797
Alignment:
Q  62 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttaccttag 151  Q
    |||||||||||||| |||||||| ||||||| ||||| |||||||| |||| |||||||| |||| ||| ||||||||||||||||||||    
T  191886 ttctcaaaaactaaacctacaacatgttaaatctaattatcagaatcataggcttaagaagattgaatgttagtcccacccttaccttag 191797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 43 - 213
Target Start/End: Original strand, 86406 - 86576
Alignment:
Q  43 tttaacctaattccccaatttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccaccc 142  Q
    ||||||||||||| |||| ||||| |||  |||||||||| |||||||||  ||||||||||||||| |||||||| |  |||| ||||||||| |||||    
T  86406 tttaacctaattctccaacttctctaaat-taatcctaca-cttgttaaat-taatcatcagaattacagacttaataggattgaatgctagtctcaccc 86502  T
Q  143 ttaccttag-ataatcaaaatcgcagcc--cttctaggtcctcttcccttttcttgacttttctcccttttctc 213  Q
    ||||||||| | | || |||||||||||  |||  |||| ||| || ||| |||||||||||||||||||||||    
T  86503 ttaccttagtaaagtcgaaatcgcagccctcttgaaggttctcctctcttctcttgacttttctcccttttctc 86576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1835 (Bit Score: 53; Significance: 1e-21; HSPs: 1)
Name: scaffold1835
Description:

Target: scaffold1835; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 62 - 150
Target Start/End: Original strand, 171 - 259
Alignment:
Q  62 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctta 150  Q
    |||||||||||||| |||||||| ||||||| |||||||||||||||| || |||||||| |||| ||| ||||| |||||||||||||    
T  171 ttctcaaaaactaaccctacaacatgttaaatctaatcatcagaattaaaggcttaagaagattgaatgttagtcgcacccttacctta 259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0359 (Bit Score: 53; Significance: 1e-21; HSPs: 1)
Name: scaffold0359
Description:

Target: scaffold0359; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 40 - 152
Target Start/End: Original strand, 16276 - 16387
Alignment:
Q  40 acttttaacctaattccccaatttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtccca 139  Q
    |||||||||||||||||| |||| |||||||||||| |||||||| ||||||||  |||  ||||||| ||||||||||||  | || ||| ||||||||    
T  16276 acttttaacctaattcccaaatt-ctcaaaaactaaacctacaacatgttaaaggcaattttcagaataatagacttaagattaatgaatgttagtccca 16374  T
Q  140 cccttaccttaga 152  Q
    |||||||||||||    
T  16375 cccttaccttaga 16387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1403 (Bit Score: 52; Significance: 6e-21; HSPs: 1)
Name: scaffold1403
Description:

Target: scaffold1403; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 69 - 213
Target Start/End: Original strand, 1411 - 1555
Alignment:
Q  69 aaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttaccttagataatcaaaatcgcagc 168  Q
    |||||||||||||| |||||||||   ||||||||||||||||||||||| || |||| ||||||||| ||||||||||||||| |||  ||||||||||    
T  1411 aaactaatcctaca-cttgttaaattcaatcatcagaattatagacttaataagattgaatgctagtctcacccttaccttaga-aatagaaatcgcagc 1508  T
Q  169 cct--tctaggtcctcttcccttttcttgacttttctcccttttctc 213  Q
     ||  ||| |||  |  || ||| |||||||||||||||||||||||    
T  1509 tctcctcttggtggttctctcttctcttgacttttctcccttttctc 1555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0686 (Bit Score: 52; Significance: 6e-21; HSPs: 1)
Name: scaffold0686
Description:

Target: scaffold0686; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 43 - 150
Target Start/End: Original strand, 2126 - 2232
Alignment:
Q  43 tttaacctaattccccaatttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccaccc 142  Q
    ||||||||||||| | |||| ||||||||||||||||||||| |||||||   || ||| ||||| |||||||||| | ||||| |||||||||||||||    
T  2126 tttaacctaattctcaaatt-ctcaaaaactaatcctacaacctgttaaatacaaccattagaatcatagacttaatagaattgaatgctagtcccaccc 2224  T
Q  143 ttacctta 150  Q
    ||||||||    
T  2225 ttacctta 2232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 52; Significance: 6e-21; HSPs: 3)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 73 - 212
Target Start/End: Complemental strand, 59963 - 59823
Alignment:
Q  73 taatcctacaacttgttaaagctaatcatcagaattataga-cttaagaaaattggatgctagtcccacccttaccttagataatcaaaatcgcagccct 171  Q
    |||||||||| |||||||||   || ||||||||||||| | ||||| | ||||| ||||||||| ||||||||||||||| |||| |||||||| ||||    
T  59963 taatcctaca-cttgttaaatacaaccatcagaattatacaacttaatagaattgaatgctagtctcacccttaccttaga-aatcgaaatcgcaaccct 59866  T
Q  172 --tctaggtcctcttcccttttcttgacttttctcccttttct 212  Q
      ||||||| |||||| ||| ||||||||||||||||||||||    
T  59865 cttctaggttctcttctcttctcttgacttttctcccttttct 59823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 63 - 149
Target Start/End: Original strand, 7174 - 7260
Alignment:
Q  63 tctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctt 149  Q
    ||||| ||||||| |||||||| |||||||  ||||||||||||| |||| |||||||| |||| ||| ||||||||||||||||||    
T  7174 tctcacaaactaaacctacaacatgttaaatataatcatcagaatcataggcttaagaagattgaatgttagtcccacccttacctt 7260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 69 - 151
Target Start/End: Original strand, 1528 - 1610
Alignment:
Q  69 aaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttaccttag 151  Q
    ||||||| |||||||| ||||||| |||||||||||||| |||| |||||||| |||| ||| |||||||||| || ||||||    
T  1528 aaactaaacctacaacatgttaaatctaatcatcagaatcataggcttaagaatattgaatgttagtcccacctttgccttag 1610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0914 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0914
Description:

Target: scaffold0914; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 68 - 150
Target Start/End: Original strand, 2614 - 2696
Alignment:
Q  68 aaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctta 150  Q
    |||||||| | ||| |||||||||| |||||||||||||||||||||||||||| |||| ||| ||||| |||||||||||||    
T  2614 aaaactaaacttacgacttgttaaatctaatcatcagaattatagacttaagaagattgaatgttagtctcacccttacctta 2696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 42 - 213
Target Start/End: Complemental strand, 203647 - 203473
Alignment:
Q  42 ttttaacctaattccccaatttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattataga-cttaagaaaattggatgctagtcccac 140  Q
    |||||||||||||  |||||| ||||||| |||| |||||||||||||||| |||| ||||||||||||| | |||||||| |||| ||| ||||| |||    
T  203647 ttttaacctaattttccaatt-ctcaaaa-ctaaacctacaacttgttaaatctaaccatcagaattataaagcttaagaagattgaatgttagtctcac 203550  T
Q  141 ccttaccttagataatcaaaatcgcagc-ccttctaggtcctcttc---ccttttcttgacttttctcccttttctc 213  Q
    |||||||||| |    ||||||||||||  | ||||||| ||||||    ||| |||||||||||||||||||||||    
T  203549 ccttaccttataattccaaaatcgcagcttcctctaggttctcttctcttcttctcttgacttttctcccttttctc 203473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0420 (Bit Score: 48; Significance: 1e-18; HSPs: 1)
Name: scaffold0420
Description:

Target: scaffold0420; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 57 - 210
Target Start/End: Complemental strand, 5552 - 5399
Alignment:
Q  57 ccaatttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttaccttagataa- 155  Q
    |||| ||||| ||||||||||||||| |||||||||   || ||||||||||| |||||||| || |||| ||| ||||| |||||||||||| |||||     
T  5552 ccaacttctctaaaactaatcctaca-cttgttaaatacaaccatcagaattacagacttaataagattgaatgttagtctcacccttacctt-gataat 5455  T
Q  156 tcaaaatcgcagcc-cttctaggtcctcttcccttttcttgacttttctccctttt 210  Q
    |  ||||||||||| || ||  ||||||||| ||| ||||||||||||||||||||    
T  5454 ttgaaatcgcagcctctacttagtcctcttctcttctcttgacttttctccctttt 5399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0180 (Bit Score: 48; Significance: 1e-18; HSPs: 2)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 43 - 150
Target Start/End: Complemental strand, 33775 - 33669
Alignment:
Q  43 tttaacctaattccccaatttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccaccc 142  Q
    ||||||||||||| | |||| ||||||||||||||||||||| |||||||   || |||| |||| |||||||||| | ||||| |||||||||||| ||    
T  33775 tttaacctaattctcaaatt-ctcaaaaactaatcctacaacctgttaaatacaaccatcggaatcatagacttaatagaattgaatgctagtcccagcc 33677  T
Q  143 ttacctta 150  Q
    ||||||||    
T  33676 ttacctta 33669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0180; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 73 - 150
Target Start/End: Complemental strand, 31447 - 31370
Alignment:
Q  73 taatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctta 150  Q
    |||||||||||  |||||||   || ||||||||| |||||||||| | ||||| |||||||||||||||||||||||    
T  31447 taatcctacaatctgttaaatacaaccatcagaatcatagacttaatagaattgaatgctagtcccacccttacctta 31370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 138 - 204
Target Start/End: Original strand, 47548 - 47614
Alignment:
Q  138 cacccttaccttagataatcaaaatcgcagcccttctaggtcctcttcccttttcttgacttttctc 204  Q
    |||||||||||||||||||| |||||||||||||||| ||| ||||||||||| ||||||| |||||    
T  47548 cacccttaccttagataatcgaaatcgcagcccttcttggttctcttccctttccttgactcttctc 47614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0184 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 62 - 213
Target Start/End: Complemental strand, 334 - 185
Alignment:
Q  62 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttaccttagataatcaaaa 161  Q
    ||||| ||||| ||||||||| |||||||||  ||||||||||||||| |||||||| | ||||| ||||||||| |||||||| ||||||  |  ||||    
T  334 ttctctaaaaccaatcctaca-cttgttaaatttaatcatcagaattacagacttaatagaattgaatgctagtctcacccttatcttagaataagaaaa 236  T
Q  162 tcgcagcccttctaggtcctcttcccttttcttgac-ttttctcccttttctc 213  Q
    ||||||||  |||| || ||  |||||| ||||| | ||||||||||||||||    
T  235 tcgcagcc--tctatgtgcttctcccttctcttggctttttctcccttttctc 185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 69 - 150
Target Start/End: Complemental strand, 13633 - 13552
Alignment:
Q  69 aaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctta 150  Q
    ||||||| |||||||||||||||  ||||||||||||||||  | |||||||| |||| ||| |||||||||||||||||||    
T  13633 aaactaaacctacaacttgttaagtctaatcatcagaattaacggcttaagaagattgaatgttagtcccacccttacctta 13552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 62 - 150
Target Start/End: Complemental strand, 220420 - 220334
Alignment:
Q  62 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctta 150  Q
    |||||||||||||| ||||| |  ||||||| |||||||||||||| |||| |||||||| |||| ||| |||||||||||||||||||    
T  220420 ttctcaaaaactaaacctacca--tgttaaatctaatcatcagaatcataggcttaagaagattgaatgttagtcccacccttacctta 220334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 68 - 210
Target Start/End: Complemental strand, 17446 - 17304
Alignment:
Q  68 aaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttaccttagataa-tcaaaatcgca 166  Q
    ||||||||||||||| |||||||||   || ||||||||||| |||||||| || |||| ||| ||||| ||||||||||||| |||| |  ||||||||    
T  17446 aaaactaatcctaca-cttgttaaatacaaccatcagaattacagacttaataagattgaatgttagtctcacccttacctta-ataatttgaaatcgca 17349  T
Q  167 gcc-cttctaggtcctcttcccttttcttgacttttctccctttt 210  Q
    ||| || || |||||||||| ||| ||||||||||||||| ||||    
T  17348 gcctctacttggtcctcttctcttctcttgacttttctccttttt 17304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0114 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0114
Description:

Target: scaffold0114; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 83 - 167
Target Start/End: Complemental strand, 46309 - 46225
Alignment:
Q  83 acttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttaccttagataatcaaaatcgcag 167  Q
    ||||||||||  ||||||||||||||| |||||||| | ||||| ||||||||| |||||||||||||||  || ||||||||||    
T  46309 acttgttaaatttaatcatcagaattacagacttaatagaattgaatgctagtctcacccttaccttagaatatgaaaatcgcag 46225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 62 - 150
Target Start/End: Complemental strand, 54900 - 54812
Alignment:
Q  62 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctta 150  Q
    |||||||||||||| |||||||||||||||| |||||||||| ||||| ||   |||||| |||| ||| ||||||||| |||||||||    
T  54900 ttctcaaaaactaaccctacaacttgttaaatctaatcatcataattaaaggtataagaagattgaatgttagtcccactcttacctta 54812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 44; Significance: 3e-16; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 40 - 150
Target Start/End: Complemental strand, 37390 - 37283
Alignment:
Q  40 acttttaacctaattccccaatttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtccca 139  Q
    ||||||||||||||| || | ||||  ||||||||| |||||| | ||||||| |||||||||||||| |||| |||||||| |||| ||| ||||| ||    
T  37390 acttttaacctaatttccaactttc--aaaaactaaacctaca-catgttaaatctaatcatcagaatcataggcttaagaagattgaatgttagtctca 37294  T
Q  140 cccttacctta 150  Q
    |||||||||||    
T  37293 cccttacctta 37283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 44; Significance: 3e-16; HSPs: 2)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 43 - 150
Target Start/End: Original strand, 97893 - 97999
Alignment:
Q  43 tttaacctaattccccaatttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccaccc 142  Q
    ||||||||||||| | |||| |||||||| |||||||||||| |||||||   || ||||||||| |||||||||| | ||||| ||| |||| ||||||    
T  97893 tttaacctaattctcaaatt-ctcaaaaattaatcctacaacctgttaaatacaaccatcagaatcatagacttaatagaattgaatgttagttccaccc 97991  T
Q  143 ttacctta 150  Q
    ||||||||    
T  97992 ttacctta 97999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #2
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 43 - 150
Target Start/End: Original strand, 107171 - 107277
Alignment:
Q  43 tttaacctaattccccaatttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccaccc 142  Q
    ||||||||||||| | |||| |||||||| |||||||||||| |||||||   || ||||||||| |||||||||| | ||||| ||| |||| ||||||    
T  107171 tttaacctaattctcaaatt-ctcaaaaattaatcctacaacctgttaaatacaaccatcagaatcatagacttaatagaattgaatgttagttccaccc 107269  T
Q  143 ttacctta 150  Q
    ||||||||    
T  107270 ttacctta 107277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0072 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 2)
Name: scaffold0072
Description:

Target: scaffold0072; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 62 - 150
Target Start/End: Original strand, 58700 - 58785
Alignment:
Q  62 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctta 150  Q
    ||||| |||||||||||| |||||||||||| |||||||   |||| |||||||||| ||||||| ||| ||||| |||||||||||||    
T  58700 ttctccaaaactaatccttcaacttgttaaatctaatca---gaatcatagacttaataaaattgaatgttagtctcacccttacctta 58785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0072; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 43 - 213
Target Start/End: Complemental strand, 62435 - 62265
Alignment:
Q  43 tttaacctaattccccaatttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccaccc 142  Q
    ||||||||||||| |||| ||||| |||  ||||||||||  ||||||||  ||||||||||||||| |||||||  || |||| ||||||||| |||||    
T  62435 tttaacctaattctccaacttctctaaat-taatcctacat-ttgttaaat-taatcatcagaattacagacttattaagattgaatgctagtctcaccc 62339  T
Q  143 ttaccttag-ataatcaaaatcgcag--cccttctaggtcctcttcccttttcttgacttttctcccttttctc 213  Q
    ||||||||| | |||| |||||||||  | |||  |||| ||| || ||| ||||||||||||||| |||||||    
T  62338 ttaccttagcaaaatcgaaatcgcagctctcttgaaggttctcctctcttctcttgacttttctccattttctc 62265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 4)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 40 - 145
Target Start/End: Original strand, 14205 - 14307
Alignment:
Q  40 acttttaacctaattccccaatttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtccca 139  Q
    |||||||| ||||||||  || |||||||||||||| |||||||| | ||||| ||||| |||||||| |||| |||||||| |||| ||| ||||||||    
T  14205 acttttaatctaattcc--aaattctcaaaaactaa-cctacaacatattaaatctaattatcagaatcataggcttaagaagattgaatgttagtccca 14301  T
Q  140 ccctta 145  Q
    ||||||    
T  14302 ccctta 14307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 57 - 157
Target Start/End: Original strand, 23077 - 23175
Alignment:
Q  57 ccaatttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttaccttagataat 156  Q
    |||| |||||||||||||| |||||||| ||||||| ||||| |||||||| ||||  ||||||| |||| ||| |||||| |||||||||||||| |||    
T  23077 ccaaattctcaaaaactaa-cctacaacatgttaaatctaattatcagaatcataggattaagaagattgaatgttagtcc-acccttaccttagaaaat 23174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040; HSP #3
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 62 - 150
Target Start/End: Original strand, 20598 - 20686
Alignment:
Q  62 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctta 150  Q
    |||||||||||||| |||||||| |||||||   |||  ||||||| ||||||| ||||  |||| ||| |||||||||||||||||||    
T  20598 ttctcaaaaactaaacctacaacatgttaaatacaattttcagaatcatagactcaagattattgaatgttagtcccacccttacctta 20686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 57 - 213
Target Start/End: Complemental strand, 13127 - 12971
Alignment:
Q  57 ccaatttctcaaaaactaat-cctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttaccttagataa 155  Q
    |||| ||||||||||||||  |||||||| ||||||| | |||  ||||||| |  |||||||||  |||| ||| |||||||||||||||||||||  |    
T  13127 ccaaattctcaaaaactaaaacctacaacatgttaaatccaattttcagaatcaatgacttaagattattgaatgttagtcccacccttaccttagaata 13028  T
Q  156 tcaaaatcgcagcccttctaggtcctcttcccttttcttgac-ttttctcccttttctc 213  Q
      ||||||||||||  |||| || ||  |||||| ||||| | ||||||||||||||||    
T  13027 agaaaatcgcagcc--tctatgtgcttctcccttctcttggctttttctcccttttctc 12971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0394 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0394
Description:

Target: scaffold0394; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 69 - 150
Target Start/End: Original strand, 13019 - 13100
Alignment:
Q  69 aaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctta 150  Q
    ||||||| ||| |||| ||||||| ||||| |||||||| |||| |||||||| |||| ||| |||||||||||||||||||    
T  13019 aaactaaacctccaacatgttaaatctaattatcagaatcataggcttaagaagattgaatgttagtcccacccttacctta 13100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0535 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0535
Description:

Target: scaffold0535; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 62 - 213
Target Start/End: Original strand, 7538 - 7688
Alignment:
Q  62 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttaccttagataatcaaaa 161  Q
    |||||||||||||| |||||||| |||||||   |||  ||||||| ||||||| ||||  |||| ||| ||||| ||||||||||||| | ||| ||||    
T  7538 ttctcaaaaactaaacctacaacatgttaaatacaattctcagaatcatagactcaagattattgaatgttagtctcacccttacctta-acaatgaaaa 7636  T
Q  162 tcgcagcccttctaggtcctcttcccttttcttgac-ttttctcccttttctc 213  Q
    |||||| | ||||||||  || |||||| ||||| | ||||||||||||||||    
T  7637 tcgcag-ctttctaggttgtcctcccttctcttggctttttctcccttttctc 7688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0254 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 2)
Name: scaffold0254
Description:

Target: scaffold0254; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 56 - 179
Target Start/End: Original strand, 19126 - 19249
Alignment:
Q  56 cccaatttctcaaaaactaat-cctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttaccttagata 154  Q
    ||||| ||||||||||||||  |||||||| ||||||| |||||  ||||||| |  |||||||||  |||| ||| ||||||||||||||||||| |      
T  19126 cccaaattctcaaaaactaaaacctacaacatgttaaatctaattttcagaatcaatgacttaagattattgaatgttagtcccacccttaccttata-g 19224  T
Q  155 atcaaaatcgcagcccttctaggtc 179  Q
    || ||||||||||| ||||||||||    
T  19225 atgaaaatcgcagcacttctaggtc 19249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0254; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 62 - 152
Target Start/End: Original strand, 21610 - 21701
Alignment:
Q  62 ttctcaaaaactaat-cctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttaccttaga 152  Q
    ||||||||||||||  |||||||| ||||||| | |||  ||||||| |  |||||||||  |||| ||| |||||||||||||||||||||    
T  21610 ttctcaaaaactaaaacctacaacatgttaaatccaattttcagaatcaatgacttaagattattgaatgttagtcccacccttaccttaga 21701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0574 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 1)
Name: scaffold0574
Description:

Target: scaffold0574; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 62 - 153
Target Start/End: Original strand, 7205 - 7296
Alignment:
Q  62 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttaccttagat 153  Q
    |||||||||||||| |||||||| |||||||   |||  ||||||| ||||||| ||||  |||| ||| ||||||||||||||||||||||    
T  7205 ttctcaaaaactaaacctacaacatgttaaatacaattttcagaatcatagactcaagattattgaatgttagtcccacccttaccttagat 7296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0347 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 1)
Name: scaffold0347
Description:

Target: scaffold0347; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 67 - 150
Target Start/End: Original strand, 9771 - 9853
Alignment:
Q  67 aaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctta 150  Q
    ||||||||| |||||| | ||||||| |||||||||||||| |||| |||||||| |||| ||| ||||| |||||||||||||    
T  9771 aaaaactaaacctaca-catgttaaatctaatcatcagaatcataggcttaagaagattgaatgttagtctcacccttacctta 9853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0282 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 1)
Name: scaffold0282
Description:

Target: scaffold0282; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 62 - 157
Target Start/End: Complemental strand, 17423 - 17328
Alignment:
Q  62 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttaccttagataatc 157  Q
    |||||||||||||| |||||||  ||||||| ||||| |||||||| |||  |||||||| | || ||| |||||||| |||||||||||| ||||    
T  17423 ttctcaaaaactaaacctacaaaatgttaaatctaattatcagaatcatatgcttaagaagactgaatgttagtcccaaccttaccttagaaaatc 17328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 69 - 150
Target Start/End: Original strand, 22794 - 22872
Alignment:
Q  69 aaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctta 150  Q
    |||||||||||||||||||||||| |||   |||||||| |||||||||| |||||||  || ||||| |||||||||||||    
T  22794 aaactaatcctacaacttgttaaatcta---atcagaatcatagacttaaaaaaattgagtgttagtctcacccttacctta 22872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 3)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 69 - 150
Target Start/End: Complemental strand, 13725 - 13647
Alignment:
Q  69 aaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctta 150  Q
    |||||||||||||||||||||||| |||   |||||||| |||||||||| |||||||  || ||||| |||||||||||||    
T  13725 aaactaatcctacaacttgttaaatcta---atcagaatcatagacttaaaaaaattgagtgttagtctcacccttacctta 13647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 73 - 213
Target Start/End: Original strand, 268545 - 268683
Alignment:
Q  73 taatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttaccttagataatcaaaatc-gcagccct 171  Q
    |||||||||| ||||||||| |||||||||||||||| || ||||| | ||||| ||  ||||| ||||||||||||| | | |||||||| |||||  |    
T  268545 taatcctaca-cttgttaaatctaatcatcagaattacaggcttaatataattgaataatagtctcacccttaccttata-attcaaaatcggcagcttt 268642  T
Q  172 -tctaggtcctcttcccttttcttgacttttctcccttttctc 213  Q
     |||||||  || |||||| | |||||||||||||||||||||    
T  268643 ctctaggt--tcctcccttcttttgacttttctcccttttctc 268683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 40 - 151
Target Start/End: Complemental strand, 165725 - 165615
Alignment:
Q  40 acttttaacctaattccccaatttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtccca 139  Q
    ||||||||||||||| ||||| ||||||| |||||| | |||||| ||||||||  |||  ||||||| |||| |||||||  | || |||  |||||||    
T  165725 acttttaacctaatt-cccaaattctcaagaactaaacatacaacatgttaaagacaattttcagaataatagtcttaagattaatgaatgtaagtccca 165627  T
Q  140 cccttaccttag 151  Q
    ||||||| ||||    
T  165626 cccttacgttag 165615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0290 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0290
Description:

Target: scaffold0290; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 68 - 150
Target Start/End: Original strand, 1042 - 1124
Alignment:
Q  68 aaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctta 150  Q
    |||| ||| ||| |||| ||||||| ||||| |||||||| |||| |||||||| |||| ||| |||||||||||||||||||    
T  1042 aaaattaaacctccaacatgttaaatctaattatcagaatcataggcttaagaagattgaatgttagtcccacccttacctta 1124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0125
Description:

Target: scaffold0125; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 68 - 150
Target Start/End: Complemental strand, 1133 - 1051
Alignment:
Q  68 aaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctta 150  Q
    |||| ||| ||| |||| ||||||| ||||| |||||||| |||| |||||||| |||| ||| |||||||||||||||||||    
T  1133 aaaattaaacctccaacatgttaaatctaataatcagaatcataggcttaagaagattgaatgttagtcccacccttacctta 1051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 68 - 150
Target Start/End: Original strand, 72399 - 72481
Alignment:
Q  68 aaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctta 150  Q
    |||||||| ||| |||| ||||||| ||||| ||||||||  ||| |||||||| |||| ||| |||||||||||||||||||    
T  72399 aaaactaaacctccaacatgttaaacctaattatcagaatcgtaggcttaagaagattgaatgttagtcccacccttacctta 72481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 68 - 150
Target Start/End: Complemental strand, 75107 - 75025
Alignment:
Q  68 aaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctta 150  Q
    |||||||| |||||||| ||||||| ||||| || ||||| |||  |||||||| |||| ||| |||||||||||||||||||    
T  75107 aaaactaaacctacaacatgttaaatctaattataagaataatatgcttaagaagattgaatgttagtcccacccttacctta 75025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 2)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 62 - 168
Target Start/End: Original strand, 185023 - 185129
Alignment:
Q  62 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttaccttagataatcaaaa 161  Q
    |||||||||||||| |||||||| |||||||   |||  ||||||| ||||||| ||||  |||| ||| |||||||||||||||||| ||  || ||||    
T  185023 ttctcaaaaactaaacctacaacatgttaaatacaattttcagaatcatagactcaagattattgaatgttagtcccacccttaccttggaatataaaaa 185122  T
Q  162 tcgcagc 168  Q
    |||||||    
T  185123 tcgcagc 185129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 101 - 153
Target Start/End: Complemental strand, 172158 - 172106
Alignment:
Q  101 tcagaattatagacttaagaaaattggatgctagtcccacccttaccttagat 153  Q
    ||||||||||||||||||||  | || ||| ||||||||||||||||||||||    
T  172158 tcagaattatagacttaagatcactgaatgatagtcccacccttaccttagat 172106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 84 - 213
Target Start/End: Original strand, 72564 - 72692
Alignment:
Q  84 cttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttaccttagataatcaaaatcgcagcccttctaggtcctct 183  Q
    |||||||||  ||||||||||||||| |||||||| || |||| ||| ||||| ||||||||||||| |  ||  ||||| |||||| |||||||| ||     
T  72564 cttgttaaatttaatcatcagaattacagacttaataagattgaatgttagtctcacccttaccttataagat-gaaatcacagcccctctaggtcttc- 72661  T
Q  184 tcccttttcttgac-ttttctcccttttctc 213  Q
    |||||| ||||| | ||||||||||||||||    
T  72662 tcccttctcttggctttttctcccttttctc 72692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0737 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0737
Description:

Target: scaffold0737; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 113 - 213
Target Start/End: Complemental strand, 963 - 864
Alignment:
Q  113 acttaagaaaattggatgctagtcccacccttaccttagataatcaaaatcgcagcccttctaggtcctcttcccttttcttgac-ttttctcccttttc 211  Q
    |||||| | ||||| ||||||||| | ||||||||||||| |||  |||||||||||| |||||||||||||| ||| ||||| | ||||||||||||||    
T  963 acttaatagaattgaatgctagtctcgcccttaccttaga-aattgaaatcgcagccc-tctaggtcctcttctcttctcttgtctttttctcccttttc 866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0601 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0601
Description:

Target: scaffold0601; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 69 - 150
Target Start/End: Original strand, 7547 - 7627
Alignment:
Q  69 aaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctta 150  Q
    |||| ||||||||| |||||||||  ||||||||||||||| |||||||| | ||||| ||| ||||| |||||||||||||    
T  7547 aaaccaatcctaca-cttgttaaatttaatcatcagaattacagacttaatagaattgaatgttagtctcacccttacctta 7627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 68 - 169
Target Start/End: Original strand, 39208 - 39308
Alignment:
Q  68 aaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttaccttagataatcaaaatcgcag 167  Q
    ||||| ||||||||| |||||||||   || ||| ||||||| |||||||| || |||| ||||||||| ||||||||||||||| |||| |||||| ||    
T  39208 aaaacaaatcctaca-cttgttaaatacaaccattagaattacagacttaataagattgaatgctagtctcacccttaccttagaaaatcgaaatcgtag 39306  T
Q  168 cc 169  Q
    ||    
T  39307 cc 39308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0130 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0130
Description:

Target: scaffold0130; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 48 - 152
Target Start/End: Complemental strand, 1007 - 903
Alignment:
Q  48 cctaattccccaatttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagac-ttaagaaaattggatgctagtcccacccttac 146  Q
    |||||||| |||| ||||| |||| |||||||||| |||||||||   || ||||||||||||| |  |||| ||||||| ||||||||| |||||||||    
T  1007 cctaattctccaacttctctaaaattaatcctaca-cttgttaaatacaaccatcagaattatatagattaataaaattgaatgctagtctcacccttac 909  T
Q  147 cttaga 152  Q
    ||||||    
T  908 cttaga 903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0112 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0112
Description:

Target: scaffold0112; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 68 - 201
Target Start/End: Complemental strand, 23206 - 23075
Alignment:
Q  68 aaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttaccttagataatcaaaatcgcag 167  Q
    |||| ||| ||| |||| ||||||| ||||| |||||||| |||| |||||||| |||| ||| ||||| ||||||||||||| | ||| ||||||||||    
T  23206 aaaattaaacctccaacatgttaaatctaattatcagaatcataggcttaagaagattgaatgttagtcacacccttacctta-acaatgaaaatcgcag 23108  T
Q  168 cccttctaggtcctcttcccttttcttgactttt 201  Q
    | | |||||||  |  |||||| |||||||||||    
T  23107 ctc-tctaggtgtttctcccttctcttgactttt 23075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 81 - 150
Target Start/End: Original strand, 42278 - 42347
Alignment:
Q  81 caacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctta 150  Q
    |||| ||||||| ||||| |||||||| |||| |||||||| |||| ||| |||||||||||||||||||    
T  42278 caacatgttaaatctaattatcagaatcataggcttaagaagattgaatgttagtcccacccttacctta 42347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 43 - 152
Target Start/End: Complemental strand, 22604 - 22497
Alignment:
Q  43 tttaacctaattccccaatttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccaccc 142  Q
    ||||||||||||| | |||| ||| |||||||| |||||| |||||||||   || ||||||||||| |||||||| |  |||| ||||||||| |||||    
T  22604 tttaacctaattctcaaatt-ctctaaaactaaccctaca-cttgttaaataaaaccatcagaattacagacttaataggattgcatgctagtctcaccc 22507  T
Q  143 ttaccttaga 152  Q
    ||||||||||    
T  22506 ttaccttaga 22497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0711 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0711
Description:

Target: scaffold0711; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 62 - 150
Target Start/End: Complemental strand, 6985 - 6897
Alignment:
Q  62 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctta 150  Q
    |||||||||||||| |||||||| |||||||   |||  ||||||| ||||||| ||||  |||| ||| |||||||||||||||||||    
T  6985 ttctcaaaaactaaacctacaacatgttaaatacaattttcagaatcatagactcaagattattgaatgttagtcccacccttacctta 6897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0439 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0439
Description:

Target: scaffold0439; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 101 - 157
Target Start/End: Original strand, 12397 - 12453
Alignment:
Q  101 tcagaattatagacttaagaaaattggatgctagtcccacccttaccttagataatc 157  Q
    ||||||| ||||||||||||| |||| ||||||||| |||||||||||||| |||||    
T  12397 tcagaatcatagacttaagaagattgaatgctagtctcacccttaccttagttaatc 12453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0322 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0322
Description:

Target: scaffold0322; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 62 - 150
Target Start/End: Original strand, 18691 - 18779
Alignment:
Q  62 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctta 150  Q
    |||||||||||||| |||||||| |||||||   |||  ||||||| ||||||| ||||  |||| ||| |||||||||||||||||||    
T  18691 ttctcaaaaactaaacctacaacatgttaaatacaattttcagaatcatagactcaagattattgaatgttagtcccacccttacctta 18779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0149
Description:

Target: scaffold0149; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 62 - 150
Target Start/End: Original strand, 34250 - 34338
Alignment:
Q  62 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctta 150  Q
    |||||||||||||| |||||||| |||||||   |||  ||||||| ||||||| ||||  |||| ||| |||||||||||||||||||    
T  34250 ttctcaaaaactaaacctacaacatgttaaatacaattttcagaatcatagactcaagattattgaatgttagtcccacccttacctta 34338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0108 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0108
Description:

Target: scaffold0108; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 61 - 157
Target Start/End: Original strand, 3993 - 4089
Alignment:
Q  61 tttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttaccttagataatc 157  Q
    ||||||| || ||||||| ||||| ||||||| ||||| |||| ||| |||| |||||||| |||  ||| ||||| ||||||||||||||| ||||    
T  3993 tttctcataatctaatcccacaacatgttaaatctaattatcataatcataggcttaagaagattaaatgttagtctcacccttaccttagaaaatc 4089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 37; Significance: 0.000000000005; HSPs: 2)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 62 - 150
Target Start/End: Original strand, 107229 - 107317
Alignment:
Q  62 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctta 150  Q
    |||||||||||||| |||||||| |||||||   |||  ||||||| ||||||| ||||  |||| ||| |||||||||||||||||||    
T  107229 ttctcaaaaactaaacctacaacatgttaaatacaattttcagaatcatagactcaagattattgaatgttagtcccacccttacctta 107317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 63 - 150
Target Start/End: Original strand, 115731 - 115818
Alignment:
Q  63 tctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctta 150  Q
    ||||||||||||| |||||||| |||||||   |||  ||||||| ||||||| ||||  |||| ||| |||||||||||||||||||    
T  115731 tctcaaaaactaaacctacaacatgttaaatacaattttcagaatcatagactcaagattattgaatgttagtcccacccttacctta 115818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0546 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0546
Description:

Target: scaffold0546; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 40 - 146
Target Start/End: Original strand, 7874 - 7981
Alignment:
Q  40 acttttaacctaattccccaatttctcaaaaactaat-cctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtccc 138  Q
    ||||||||||| | | ||||| ||||||||||||||  |||||||| ||||||| | |||  | ||||| ||||||||||||  |||| ||| |||||||    
T  7874 acttttaaccttaattcccaaattctcaaaaactaaaacctacaacatgttaaatccaatttttagaatcatagacttaagattattgaatgttagtccc 7973  T
Q  139 acccttac 146  Q
    ||||||||    
T  7974 acccttac 7981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0230 (Bit Score: 36; Significance: 0.00000000002; HSPs: 3)
Name: scaffold0230
Description:

Target: scaffold0230; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 40 - 150
Target Start/End: Original strand, 14787 - 14898
Alignment:
Q  40 acttttaacctaattccccaatttctcaaaaactaat-cctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtccc 138  Q
    ||||||||||| | | ||||| ||||||||||||||  |||||||| ||||||| | |||  ||||||| |  |||||||||  |||| ||| |||||||    
T  14787 acttttaaccttaattcccaaattctcaaaaactaaaacctacaacatgttaaatccaattttcagaatcaatgacttaagattattgaatgttagtccc 14886  T
Q  139 acccttacctta 150  Q
    ||||||||||||    
T  14887 acccttacctta 14898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0230; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 62 - 150
Target Start/End: Complemental strand, 22788 - 22700
Alignment:
Q  62 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctta 150  Q
    |||||||||||| | |||||||| |||||||   |||  ||||||| ||||||| ||||  |||| ||| |||||||||||||||||||    
T  22788 ttctcaaaaactcaacctacaacatgttaaatacaattttcagaatcatagactcaagattattgaatgttagtcccacccttacctta 22700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0230; HSP #3
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 62 - 147
Target Start/End: Complemental strand, 20612 - 20527
Alignment:
Q  62 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacc 147  Q
    |||||||||||| | |||||||| |||||||   |||  ||||||| ||||||| ||||  |||| ||| ||||||||||||||||    
T  20612 ttctcaaaaactgaacctacaacatgttaaatacaattttcagaatcatagactcaagattattgaatgttagtcccacccttacc 20527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0109
Description:

Target: scaffold0109; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 40 - 146
Target Start/End: Complemental strand, 5433 - 5326
Alignment:
Q  40 acttttaacctaattccccaatttctcaaaaactaat-cctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtccc 138  Q
    ||||||||||| | | ||||| ||||||||||||||  |||||||| ||||||| | |||  | ||||| ||||||||||||  |||| ||| |||||||    
T  5433 acttttaaccttaattcccaaattctcaaaaactaaaacctacaacatgttaaatccaatttttagaatcatagacttaagattattgaatgttagtccc 5334  T
Q  139 acccttac 146  Q
    ||||||||    
T  5333 acccttac 5326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 69 - 152
Target Start/End: Original strand, 82967 - 83050
Alignment:
Q  69 aaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttaccttaga 152  Q
    ||||||| ||| |||| ||||||| ||||| || ||||| |||| |||||||| |||| ||| || ||||||||||||||||||    
T  82967 aaactaaacctccaacatgttaaatctaattattagaatcataggcttaagaagattgaatgttaatcccacccttaccttaga 83050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0598 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0598
Description:

Target: scaffold0598; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 109 - 210
Target Start/End: Complemental strand, 307 - 206
Alignment:
Q  109 atagacttaagaaaattggatgctagtcccacccttaccttagataatcaaaatcgcagcccttctaggtcctcttcccttttcttgac-ttttctccct 207  Q
    |||||||||| || |||| | | ||||| ||||||||||||  || || |||||||||||||||||||||| || |||||| ||||| | ||||||||||    
T  307 atagacttaataagattgcaagttagtctcacccttaccttgtatgatgaaaatcgcagcccttctaggtcttc-tcccttctcttggctttttctccct 209  T
Q  208 ttt 210  Q
    |||    
T  208 ttt 206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0480 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0480
Description:

Target: scaffold0480; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 40 - 157
Target Start/End: Original strand, 10278 - 10394
Alignment:
Q  40 acttttaacc-taattccccaatttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtccc 138  Q
    |||||||||| |||||||| |||| ||||||| |||| || ||||| || ||||   ||| |||||||| |||| |||||||| |||| ||| |||||||    
T  10278 acttttaaccctaattcccaaatt-ctcaaaa-ctaaaccaacaacatgctaaatgcaattatcagaatcataggcttaagaagattgaatgttagtccc 10375  T
Q  139 acccttaccttagataatc 157  Q
    ||||||||||||| |||||    
T  10376 acccttaccttagttaatc 10394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0191 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0191
Description:

Target: scaffold0191; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 62 - 168
Target Start/End: Original strand, 3574 - 3679
Alignment:
Q  62 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttaccttagataatcaaaa 161  Q
    |||||||||||||| |||||||| | |||||   |||  ||||||| ||||||| ||||  |||| ||| ||||||||||||||||||| | ||| ||||    
T  3574 ttctcaaaaactaaacctacaacatattaaatacaattttcagaatcatagactcaagattattgaatgttagtcccacccttacctta-acaatgaaaa 3672  T
Q  162 tcgcagc 168  Q
    |||||||    
T  3673 tcgcagc 3679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 101 - 201
Target Start/End: Original strand, 42674 - 42773
Alignment:
Q  101 tcagaattatagacttaagaaaattggatgctagtcccacccttaccttagataatcaaaatcgcagcccttctaggtcctcttcc-cttttcttgactt 199  Q
    ||||||| |||| |||||||| |||| ||| ||||||||||||||||||| | ||| |||||| |||||  |||||||| ||| || ||| |||||||||    
T  42674 tcagaatcataggcttaagaagattgaatgttagtcccacccttaccttaaagaatgaaaatcacagcc--tctaggtcttctccctcttctcttgactt 42771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0074 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 40 - 157
Target Start/End: Original strand, 9049 - 9166
Alignment:
Q  40 acttttaacc-taattccccaatttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtccc 138  Q
    |||||||||| |||||||| |||| |||||||| ||| |||||||| || ||||   ||| || ||||| |||  |||||||| |||| ||| |||||||    
T  9049 acttttaaccctaattcccaaatt-ctcaaaaattaaacctacaacatgctaaatggaattattagaatcatacgcttaagaagattgaatgttagtccc 9147  T
Q  139 acccttaccttagataatc 157  Q
    ||||||||||||| |||||    
T  9148 acccttaccttagttaatc 9166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0162
Description:

Target: scaffold0162; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 96 - 210
Target Start/End: Complemental strand, 25529 - 25416
Alignment:
Q  96 aatcatcagaattatagacttaagaaaattggatgctagtcccacccttaccttagataatcaaaatcgcagcccttct-aggtcctcttcccttttctt 194  Q
    |||||||||||||| |||||||| | ||||| | | ||||| ||||||||||||| | ||| ||||||||||||  ||| ||||||||||| ||| ||||    
T  25529 aatcatcagaattacagacttaatagaattgtaagttagtctcacccttacctta-aaaattaaaatcgcagcc--tctaaggtcctcttctcttctctt 25433  T
Q  195 gac-ttttctccctttt 210  Q
    | | |||||||||||||    
T  25432 ggctttttctccctttt 25416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0134 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0134
Description:

Target: scaffold0134; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 40 - 179
Target Start/End: Original strand, 38659 - 38798
Alignment:
Q  40 acttttaacc-taattccccaatttctcaaaaactaat-cctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcc 137  Q
    |||||||||| |||||||| |||| ||||||||||||  |||||||| ||||||| | |||  ||||||| |  |||||||||  |||| ||| ||||||    
T  38659 acttttaaccctaattcccaaatt-ctcaaaaactaaaacctacaacatgttaaatccaattttcagaatcaatgacttaagattattgaatgttagtcc 38757  T
Q  138 cacccttaccttagataatcaaaatcgcagcccttctaggtc 179  Q
    ||||||||||||| |  || ||||||||||| || |||||||    
T  38758 cacccttaccttata-gatgaaaatcgcagcactcctaggtc 38798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1792 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold1792
Description:

Target: scaffold1792; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 62 - 150
Target Start/End: Original strand, 1112 - 1200
Alignment:
Q  62 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctta 150  Q
    |||||||||||| | |||||||| |||||||   |||  ||||||| ||||||| ||||  |||| ||| |||||||||||||||||||    
T  1112 ttctcaaaaactcaacctacaacatgttaaatacaattttcagaatcatagactcaagattattgaatgttagtcccacccttacctta 1200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0877 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0877
Description:

Target: scaffold0877; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 86 - 150
Target Start/End: Complemental strand, 2092 - 2028
Alignment:
Q  86 tgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctta 150  Q
    ||||||| ||||| |||||||| |||  |||||||| |||| ||| |||||||||||||||||||    
T  2092 tgttaaatctaattatcagaatcataagcttaagaagattgaatgttagtcccacccttacctta 2028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0716 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0716
Description:

Target: scaffold0716; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 62 - 150
Target Start/End: Original strand, 5448 - 5536
Alignment:
Q  62 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctta 150  Q
    |||||||||||||| |||||||| |||||||   |||  ||||||| ||||||| ||||  |||| ||| || ||||||||||||||||    
T  5448 ttctcaaaaactaaacctacaacatgttaaatacaattttcagaatcatagactcaagattattgaatgttattcccacccttacctta 5536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0457 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0457
Description:

Target: scaffold0457; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 101 - 153
Target Start/End: Complemental strand, 10947 - 10895
Alignment:
Q  101 tcagaattatagacttaagaaaattggatgctagtcccacccttaccttagat 153  Q
    ||||||||||||||||||||  | || ||| ||||||||||||||||||||||    
T  10947 tcagaattatagacttaagatcactgaatgatagtcccacccttaccttagat 10895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0417 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0417
Description:

Target: scaffold0417; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 62 - 150
Target Start/End: Original strand, 493 - 581
Alignment:
Q  62 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctta 150  Q
    |||||||||||||| |||||||| ||||||| ||||| |||| ||| | ||  | ||||| |||| ||| ||||| |||||||||||||    
T  493 ttctcaaaaactaaccctacaacatgttaaatctaatgatcataatcaaaggttgaagaagattgaatgttagtctcacccttacctta 581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0301 (Bit Score: 33; Significance: 0.000000001; HSPs: 2)
Name: scaffold0301
Description:

Target: scaffold0301; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 101 - 153
Target Start/End: Complemental strand, 11371 - 11319
Alignment:
Q  101 tcagaattatagacttaagaaaattggatgctagtcccacccttaccttagat 153  Q
    ||||||||||||||||||||  | || ||| ||||||||||||||||||||||    
T  11371 tcagaattatagacttaagatcactgaatgatagtcccacccttaccttagat 11319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0301; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 101 - 153
Target Start/End: Complemental strand, 15771 - 15719
Alignment:
Q  101 tcagaattatagacttaagaaaattggatgctagtcccacccttaccttagat 153  Q
    ||||||||||||||||||||  | || ||| ||||||||||||||||||||||    
T  15771 tcagaattatagacttaagatcactgaatgatagtcccacccttaccttagat 15719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0297 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0297
Description:

Target: scaffold0297; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 40 - 179
Target Start/End: Complemental strand, 3027 - 2890
Alignment:
Q  40 acttttaacc-taattccccaatttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtccc 138  Q
    |||||||||| |||||||| |||| |||||||||||  ||||||||| ||||||   |||  ||||||| ||||||| ||||  |||| ||| |||||||    
T  3027 acttttaaccctaattcccaaatt-ctcaaaaactatacctacaact-gttaaatacaattttcagaatcatagactcaagattattgaatgttagtccc 2930  T
Q  139 acccttaccttagataatcaaaatcgcagcccttctaggtc 179  Q
    |||||||||||| |  || ||||||||||| || |||||||    
T  2929 acccttaccttata-gatgaaaatcgcagcactcctaggtc 2890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0200 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0200
Description:

Target: scaffold0200; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 101 - 169
Target Start/End: Original strand, 18596 - 18664
Alignment:
Q  101 tcagaattatagacttaagaaaattggatgctagtcccacccttaccttagataatcaaaatcgcagcc 169  Q
    ||||||| |||| |||||||| |||| ||| |||||||||||||||||||   ||| ||||||||||||    
T  18596 tcagaatcataggcttaagaagattgaatgttagtcccacccttaccttaatgaatgaaaatcgcagcc 18664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0145 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0145
Description:

Target: scaffold0145; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 86 - 150
Target Start/End: Original strand, 10725 - 10789
Alignment:
Q  86 tgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctta 150  Q
    |||||||  |||||||||||||||  | |||||||| |||| ||| |||||||||||||||||||    
T  10725 tgttaaatttaatcatcagaattaacggcttaagaagattgaatgttagtcccacccttacctta 10789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0142 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0142
Description:

Target: scaffold0142; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 104 - 213
Target Start/End: Complemental strand, 1682 - 1573
Alignment:
Q  104 gaattatagacttaagaaaattggatgctagtcccacccttaccttagataatcaaaatcgcagcccttctaggtcctcttcc-cttttcttgac-tttt 201  Q
    |||||| ||| |||| | ||||| ||||||||| ||||||||||||| | ||| ||||||||||||  |||||||| ||| || ||| ||||| | ||||    
T  1682 gaattacagaattaatagaattgtatgctagtctcacccttaccttaaagaatgaaaatcgcagcc--tctaggtcttctccctcttctcttggcttttt 1585  T
Q  202 ctcccttttctc 213  Q
    ||||||||||||    
T  1584 ctcccttttctc 1573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 33; Significance: 0.000000001; HSPs: 2)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 40 - 150
Target Start/End: Original strand, 158622 - 158733
Alignment:
Q  40 acttttaacc-taattccccaatttctcaaaaactaat-cctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcc 137  Q
    |||||||||| |||||||| |||| ||||||||||||  |||||||| ||||||| | |||  ||||||| |  |||||||||  |||| ||| ||||||    
T  158622 acttttaaccctaattcccaaatt-ctcaaaaactaaaacctacaacatgttaaatccaattttcagaatcaatgacttaagattattgaatgttagtcc 158720  T
Q  138 cacccttacctta 150  Q
    |||||||||||||    
T  158721 cacccttacctta 158733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 62 - 150
Target Start/End: Original strand, 21926 - 22014
Alignment:
Q  62 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctta 150  Q
    |||||||||||||| |||||||| |||||||   |||  ||| ||| ||||||| ||||  |||| ||| ||||| |||||||||||||    
T  21926 ttctcaaaaactaaacctacaacatgttaaatacaattttcacaatcatagactcaagattattgaatgttagtctcacccttacctta 22014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1439 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold1439
Description:

Target: scaffold1439; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 69 - 152
Target Start/End: Original strand, 1045 - 1128
Alignment:
Q  69 aaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttaccttaga 152  Q
    ||||||| |||  ||| ||||||| ||||| || ||||| |||| |||||||| |||| ||| ||||| |||||||||||||||    
T  1045 aaactaaacctctaacatgttaaatctaattattagaatcataggcttaagaagattgaatgttagtctcacccttaccttaga 1128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0500 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0500
Description:

Target: scaffold0500; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 40 - 151
Target Start/End: Original strand, 8338 - 8448
Alignment:
Q  40 acttttaacctaattccccaatttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtccca 139  Q
    |||||||||||||||| | |||| |||||||||||| ||| |||| ||||||||  |||  ||||||| || |||||||||  | || ||| |||| |||    
T  8338 acttttaacctaattctcaaatt-ctcaaaaactaaaccttcaacatgttaaagacaattttcagaataatggacttaagattaatgaatgttagttcca 8436  T
Q  140 cccttaccttag 151  Q
    |||||| |||||    
T  8437 cccttatcttag 8448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075 (Bit Score: 32; Significance: 0.000000005; HSPs: 2)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 122 - 210
Target Start/End: Complemental strand, 7534 - 7447
Alignment:
Q  122 aattggatgctagtcccacccttaccttagataatca-aaatcgcagcccttctaggtcctcttcccttttcttgac-ttttctccctttt 210  Q
    ||||| ||||||||| ||||| |||||||  |||||| |||||||||||| |||||||| || |||||| ||||||| |||||||||||||    
T  7534 aattgaatgctagtctcacccatacctta--taatcagaaatcgcagcccctctaggtcttc-tcccttctcttgactttttctccctttt 7447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 96 - 213
Target Start/End: Complemental strand, 50801 - 50684
Alignment:
Q  96 aatcatcagaattatagac-ttaagaaaattggatgctagtcccacccttaccttagataatcaaaatcgcagcccttctaggtcctcttcccttttctt 194  Q
    |||||||||||||||| |  |||| | ||||| ||||||||| ||||||||||||||  ||| ||||||||||| | |  ||||||||||| ||| ||||    
T  50801 aatcatcagaattatatagattaatacaattgaatgctagtctcacccttaccttag-caatgaaaatcgcagctc-taaaggtcctcttctcttctctt 50704  T
Q  195 gac-ttttctcccttttctc 213  Q
    | | ||||||||||||||||    
T  50703 ggctttttctcccttttctc 50684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 62 - 149
Target Start/End: Complemental strand, 43256 - 43169
Alignment:
Q  62 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctt 149  Q
    |||||||||||||| |||||||| ||||||    |||  ||||||| ||||||| ||||  |||| ||| ||||||||||||||||||    
T  43256 ttctcaaaaactaaacctacaacatgttaagtacaatattcagaatcatagactcaagattattgaatgttagtcccacccttacctt 43169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 40 - 213
Target Start/End: Complemental strand, 160386 - 160216
Alignment:
Q  40 acttttaacctaattccccaatttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtccca 139  Q
    ||||||||||||||||  ||||| ||||| | ||||  || |||| ||||||| ||||| |||||||| |||| |||||||| | || ||| |||||  |    
T  160386 acttttaacctaattcttcaatt-ctcaaga-ctaaatctccaacatgttaaatctaattatcagaatcataggcttaagaagagtgaatgttagtctta 160289  T
Q  140 cccttaccttagataatcaaaatcgcagcccttctaggtcctcttcccttttcttgac-ttttctcccttttctc 213  Q
    |||||||||||||  |  ||||||||||||  |||| || ||  |||||| ||||| | ||||||||||||||||    
T  160288 cccttaccttagaataagaaaatcgcagcc--tctatgtgcttctcccttctcttggctttttctcccttttctc 160216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0494 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0494
Description:

Target: scaffold0494; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 150
Target Start/End: Complemental strand, 137 - 36
Alignment:
Q  48 cctaattccccaatttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacc 147  Q
    |||||||| | ||||| ||||||||||| |||||||| |||||||   |||  ||||||| | ||||| ||||  |||| ||| ||||||||||||||||    
T  137 cctaattctcaaattt-tcaaaaactaaacctacaacatgttaaatacaattttcagaatcacagactcaagattattgaatgttagtcccacccttacc 39  T
Q  148 tta 150  Q
    |||    
T  38 tta 36  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0247 (Bit Score: 31; Significance: 0.00000002; HSPs: 2)
Name: scaffold0247
Description:

Target: scaffold0247; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 132 - 213
Target Start/End: Complemental strand, 6046 - 5965
Alignment:
Q  132 tagtcccacccttaccttagataatcaaaatcgcagcccttctaggtcctcttcccttttcttgac-ttttctcccttttctc 213  Q
    ||||| ||||||||||||| |  || ||||||||||||| |||||||| || |||||| ||||| | ||||||||||||||||    
T  6046 tagtctcacccttaccttataggatgaaaatcgcagcccctctaggtcttc-tcccttctcttggctttttctcccttttctc 5965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0247; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 96 - 213
Target Start/End: Complemental strand, 17300 - 17183
Alignment:
Q  96 aatcatcagaattatagac-ttaagaaaattggatgctagtcccacccttaccttaga-taatcaaaatcgcagcccttctaggtcctcttcccttttct 193  Q
    |||||||||||||||| |  |||| | ||||| ||||||||| ||||||||||||||| |||| ||||||||||||  |||| || ||  |||||| |||    
T  17300 aatcatcagaattatatagattaatagaattgaatgctagtctcacccttaccttagaataat-aaaatcgcagcc--tctatgtgcttctcccttctct 17204  T
Q  194 tgac-ttttctcccttttctc 213  Q
    || | ||||||||||||||||    
T  17203 tggctttttctcccttttctc 17183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 122 - 213
Target Start/End: Complemental strand, 23879 - 23788
Alignment:
Q  122 aattggatgctagtcccacccttaccttagataatcaaaatcgcagcccttctaggtcctcttcc-cttttcttgac-ttttctcccttttctc 213  Q
    ||||| ||||||||| ||||||||||||| | ||| ||||||||||||  |||||||| ||| || ||| ||||| | ||||||||||||||||    
T  23879 aattgtatgctagtctcacccttaccttaaagaatgaaaatcgcagcc--tctaggtcttctccctcttctcttggctttttctcccttttctc 23788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 132 - 213
Target Start/End: Original strand, 44826 - 44907
Alignment:
Q  132 tagtcccacccttaccttagataatcaaaatcgcagcccttctaggtcctcttcccttttcttgac-ttttctcccttttctc 213  Q
    ||||| ||||||||||||| |  || ||||||||||||| |||||||| || |||||| ||||| | ||||||||||||||||    
T  44826 tagtctcacccttaccttataggatgaaaatcgcagcccctctaggtcttc-tcccttctcttggctttttctcccttttctc 44907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 62 - 168
Target Start/End: Original strand, 60690 - 60796
Alignment:
Q  62 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttaccttagataatcaaaa 161  Q
    |||||||||||||| |||||||| | |||||   |||  ||||||  ||||||| ||||  |||| ||| |||||||||||||||||| ||  || ||||    
T  60690 ttctcaaaaactaaacctacaacatattaaataaaattttcagaaacatagactcaagattattgaatgttagtcccacccttaccttggaatataaaaa 60789  T
Q  162 tcgcagc 168  Q
    |||||||    
T  60790 tcgcagc 60796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 77 - 213
Target Start/End: Original strand, 12165 - 12300
Alignment:
Q  77 cctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttaccttagataatcaaaatcgcagcccttctag 176  Q
    |||||||| ||||||| | |||  ||||||| |  |||||||||  |||| ||| |||||||||||||||||||||  |  ||||||||||||  ||||     
T  12165 cctacaacatgttaaatccaattttcagaatcaatgacttaagattattgaatgttagtcccacccttaccttagaataagaaaatcgcagcc--tctat 12262  T
Q  177 gtcctcttcccttttcttgac-ttttctcccttttctc 213  Q
    || ||  |||||| ||||| | ||||||||||||||||    
T  12263 gtgcttctcccttctcttggctttttctcccttttctc 12300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0695 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0695
Description:

Target: scaffold0695; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 62 - 150
Target Start/End: Original strand, 6804 - 6893
Alignment:
Q  62 ttctcaaaaactaat-cctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctta 150  Q
    ||||||||||||||  |||||||| ||||||| | |||  |||||||||  |||||||||  |||| ||| ||||| |||||||||||||    
T  6804 ttctcaaaaactaaaacctacaacatgttaaatccaattttcagaattaatgacttaagattattgaatgttagtctcacccttacctta 6893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0413 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0413
Description:

Target: scaffold0413; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 48 - 152
Target Start/End: Original strand, 13462 - 13566
Alignment:
Q  48 cctaattccccaatttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagac-ttaagaaaattggatgctagtcccacccttac 146  Q
    |||||||| |||| ||||| ||||  ||||||||| |||||||||   || ||||||||||||| |  |||| | ||||| ||||||||| |||||||||    
T  13462 cctaattctccaacttctctaaaatcaatcctaca-cttgttaaatacaaccatcagaattatataaattaatagaattgaatgctagtctcacccttac 13560  T
Q  147 cttaga 152  Q
    ||||||    
T  13561 cttaga 13566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0146 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0146
Description:

Target: scaffold0146; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 40 - 150
Target Start/End: Original strand, 22926 - 23038
Alignment:
Q  40 acttttaacc-taattccccaatttctcaaaaacta-atcctacaacttgttaaagctaatcatcagaattatagacttaa-gaaaattggatgctagtc 136  Q
    |||||||||| |||||||| |||| ||||||||||| | |||||||| ||||||| | |||  | ||||| |||||||||| ||  |||| ||| |||||    
T  22926 acttttaaccctaattcccaaatt-ctcaaaaactataacctacaacatgttaaatccaatttttagaatcatagacttaaagattattgaatgttagtc 23024  T
Q  137 ccacccttacctta 150  Q
    ||||||||||||||    
T  23025 ccacccttacctta 23038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 40 - 179
Target Start/End: Complemental strand, 56331 - 56192
Alignment:
Q  40 acttttaacc-taattccccaatttctcaaaaactaat-cctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcc 137  Q
    |||||||||| |||||||| |||| ||||||||||||  |||||||| |||||||   |||  ||||||| ||||||  ||||  |||| ||| ||||||    
T  56331 acttttaaccctaattcccaaatt-ctcaaaaactaaaacctacaacatgttaaatacaattttcagaatcatagacccaagattattgaatgttagtcc 56233  T
Q  138 cacccttaccttagataatcaaaatcgcagcccttctaggtc 179  Q
    ||||||||||||| |  || ||||||||||| || |||||||    
T  56232 cacccttaccttata-gatgaaaatcgcagcactcctaggtc 56192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 30; Significance: 0.00000008; HSPs: 5)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 40 - 179
Target Start/End: Original strand, 137519 - 137658
Alignment:
Q  40 acttttaacc-taattccccaatttctcaaaaactaat-cctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcc 137  Q
    |||||||||| |||||||| |||| ||||||||||||  |||||||| |||||||   |||  ||||||| ||||||  ||||  |||| ||| ||||||    
T  137519 acttttaaccctaattcccaaatt-ctcaaaaactaaaacctacaacatgttaaatacaattttcagaatcatagacccaagattattgaatgttagtcc 137617  T
Q  138 cacccttaccttagataatcaaaatcgcagcccttctaggtc 179  Q
    ||||||||||||| |  || ||||||||||| || |||||||    
T  137618 cacccttaccttata-gatgaaaatcgcagcactcctaggtc 137658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 40 - 179
Target Start/End: Original strand, 142457 - 142596
Alignment:
Q  40 acttttaacc-taattccccaatttctcaaaaactaat-cctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcc 137  Q
    |||||||||| |||||||| |||| ||||||||||||  |||||||| |||||||   |||  ||||||| ||||||  ||||  |||| ||| ||||||    
T  142457 acttttaaccctaattcccaaatt-ctcaaaaactaaaacctacaacatgttaaatacaattttcagaatcatagacccaagattattgaatgttagtcc 142555  T
Q  138 cacccttaccttagataatcaaaatcgcagcccttctaggtc 179  Q
    ||||||||||||| |  || ||||||||||| || |||||||    
T  142556 cacccttaccttata-gatgaaaatcgcagcactcctaggtc 142596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #3
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 40 - 179
Target Start/End: Original strand, 144926 - 145065
Alignment:
Q  40 acttttaacc-taattccccaatttctcaaaaactaat-cctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcc 137  Q
    |||||||||| |||||||| |||| ||||||||||||  |||||||| |||||||   |||  ||||||| ||||||  ||||  |||| ||| ||||||    
T  144926 acttttaaccctaattcccaaatt-ctcaaaaactaaaacctacaacatgttaaatacaattttcagaatcatagacccaagattattgaatgttagtcc 145024  T
Q  138 cacccttaccttagataatcaaaatcgcagcccttctaggtc 179  Q
    ||||||||||||| |  || ||||||||||| || |||||||    
T  145025 cacccttaccttata-gatgaaaatcgcagcactcctaggtc 145065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 40 - 150
Target Start/End: Original strand, 135050 - 135161
Alignment:
Q  40 acttttaacc-taattccccaatttctcaaaaactaat-cctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcc 137  Q
    |||||||||| |||||||| |||| ||||||||||||  |||||||| |||||||   |||  ||||||| ||||||  ||||  |||| ||| ||||||    
T  135050 acttttaaccctaattcccaaatt-ctcaaaaactaaaacctacaacatgttaaatacaattttcagaatcatagacccaagattattgaatgttagtcc 135148  T
Q  138 cacccttacctta 150  Q
    |||||||||||||    
T  135149 cacccttacctta 135161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #5
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 40 - 150
Target Start/End: Original strand, 139988 - 140099
Alignment:
Q  40 acttttaacc-taattccccaatttctcaaaaactaat-cctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcc 137  Q
    |||||||||| |||||||| |||| ||||||||||||  |||||||| |||||||   |||  ||||||| ||||||  ||||  |||| ||| ||||||    
T  139988 acttttaaccctaattcccaaatt-ctcaaaaactaaaacctacaacatgttaaatacaattttcagaatcatagacccaagattattgaatgttagtcc 140086  T
Q  138 cacccttacctta 150  Q
    |||||||||||||    
T  140087 cacccttacctta 140099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 101 - 150
Target Start/End: Original strand, 209863 - 209912
Alignment:
Q  101 tcagaattatagacttaagaaaattggatgctagtcccacccttacctta 150  Q
    ||||||||||||||||||||  | || ||| |||||||||||||||||||    
T  209863 tcagaattatagacttaagatcactgaatgatagtcccacccttacctta 209912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1991 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold1991
Description:

Target: scaffold1991; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 132 - 213
Target Start/End: Complemental strand, 603 - 522
Alignment:
Q  132 tagtcccacccttaccttagataatcaaaatcgcagcccttctaggtcctcttcc-cttttcttgac-ttttctcccttttctc 213  Q
    ||||||||||||||||||| | ||| ||||||||||||  |||||||| ||| || ||| ||||||| |||||| |||||||||    
T  603 tagtcccacccttaccttaaagaatgaaaatcgcagcc--tctaggtcttctccctcttctcttgactttttcttccttttctc 522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1296 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold1296
Description:

Target: scaffold1296; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 62 - 150
Target Start/End: Original strand, 2008 - 2096
Alignment:
Q  62 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctta 150  Q
    |||||||||||||| |||| ||| | |||||   |||  ||||||| ||||||||||||  |||| ||| ||||| |||||||||||||    
T  2008 ttctcaaaaactaaacctataacatattaaatacaattttcagaatcatagacttaagattattgaatgttagtctcacccttacctta 2096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0747 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0747
Description:

Target: scaffold0747; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 62 - 150
Target Start/End: Original strand, 1462 - 1550
Alignment:
Q  62 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctta 150  Q
    ||||||| |||||| |||||||| |||||||   |||  ||| ||| ||||||| ||||  |||| ||| |||||||||||||||||||    
T  1462 ttctcaataactaaacctacaacatgttaaatacaattttcaaaatcatagactcaagattattgaatgttagtcccacccttacctta 1550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0319 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0319
Description:

Target: scaffold0319; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 62 - 213
Target Start/End: Original strand, 6075 - 6225
Alignment:
Q  62 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttaccttagataatcaaaa 161  Q
    |||||||||||||| |||||||| |||||||   |||  ||||||| ||||||| || |  |||| ||| ||||| |||| |||||||| | ||| ||||    
T  6075 ttctcaaaaactaaacctacaacatgttaaatacaattttcagaatcatagactcaaaattattgaatgttagtctcacctttacctta-acaatgaaaa 6173  T
Q  162 tcgcagcccttctaggtcctcttcccttttcttgac-ttttctcccttttctc 213  Q
    ||| ||| | ||||||| ||  |||||| ||||| | ||||||||||||||||    
T  6174 tcgtagctc-tctaggtgcttctcccttctcttggctttttctcccttttctc 6225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 62 - 150
Target Start/End: Original strand, 10738 - 10826
Alignment:
Q  62 ttctcaaaaactaatcctacaacttgttaaagctaatcatcagaattatagacttaagaaaattggatgctagtcccacccttacctta 150  Q
    |||||||||||||| |||||||  |||||||   |||  ||||||| ||||||| ||||  |||| ||| ||||| |||||||||||||    
T  10738 ttctcaaaaactaaacctacaatatgttaaatacaattttcagaatcatagactcaagattattgaatgttagtctcacccttacctta 10826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 96 - 213
Target Start/End: Original strand, 33358 - 33474
Alignment:
Q  96 aatcatcagaattatagac-ttaagaaaattggatgctagtcccacccttaccttagataatcaaaatcgcagcccttctaggtcctcttcccttttctt 194  Q
    |||||||||||||||| |  |||| | ||||| ||||||||| ||||||||||||||  ||| ||||||||||  ||||||||||   ||| ||| ||||    
T  33358 aatcatcagaattatataggttaatagaattgaatgctagtctcacccttaccttag-caatgaaaatcgcag--cttctaggtcactttctcttctctt 33454  T
Q  195 gac-ttttctcccttttctc 213  Q
    | | ||||||||||||||||    
T  33455 ggctttttctcccttttctc 33474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University