View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF19289_low_1 (Length: 1406)

Name: NF19289_low_1
Description: NF19289
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF19289_low_1
NF19289_low_1
[»] chr4 (43 HSPs)
chr4 (18-1396)||(50741903-50743286)
chr4 (331-508)||(2996510-2996689)
chr4 (319-434)||(8422867-8422982)
chr4 (327-503)||(1137645-1137823)
chr4 (377-508)||(7693965-7694095)
chr4 (375-494)||(28300267-28300386)
chr4 (375-500)||(50681050-50681176)
chr4 (340-434)||(17884014-17884110)
chr4 (326-463)||(6466045-6466184)
chr4 (340-481)||(20936210-20936353)
chr4 (317-428)||(3891500-3891611)
chr4 (406-503)||(17751106-17751200)
chr4 (399-502)||(21043195-21043298)
chr4 (465-508)||(22471347-22471390)
chr4 (399-500)||(1706629-1706731)
chr4 (467-509)||(4071953-4071995)
chr4 (339-446)||(10192229-10192337)
chr4 (393-463)||(11264302-11264372)
chr4 (455-508)||(3549509-3549562)
chr4 (398-503)||(4798525-4798630)
chr4 (310-508)||(21157684-21157884)
chr4 (318-375)||(51555956-51556013)
chr4 (393-484)||(17822842-17822934)
chr4 (398-429)||(7730630-7730661)
chr4 (398-429)||(11262796-11262827)
chr4 (406-508)||(36577496-36577599)
chr4 (399-434)||(39063675-39063710)
chr4 (395-434)||(51044508-51044547)
chr4 (322-500)||(1965868-1966048)
chr4 (410-500)||(6987703-6987793)
chr4 (399-500)||(24169270-24169372)
chr4 (468-502)||(32278369-32278403)
chr4 (319-357)||(32920505-32920543)
chr4 (321-375)||(47970245-47970299)
chr4 (425-503)||(48719350-48719428)
chr4 (375-508)||(52746793-52746927)
chr4 (341-541)||(679663-679865)
chr4 (450-495)||(1554975-1555020)
chr4 (312-357)||(2980578-2980623)
chr4 (318-367)||(4191663-4191712)
chr4 (406-463)||(19422412-19422469)
chr4 (312-357)||(46796936-46796981)
chr4 (467-500)||(49940128-49940161)
[»] chr3 (56 HSPs)
chr3 (324-508)||(44295462-44295643)
chr3 (375-494)||(21367650-21367770)
chr3 (318-484)||(1816506-1816675)
chr3 (274-508)||(30573868-30574100)
chr3 (401-543)||(45541580-45541724)
chr3 (334-463)||(24785145-24785276)
chr3 (393-504)||(14548679-14548790)
chr3 (326-508)||(20192560-20192744)
chr3 (399-508)||(37273141-37273250)
chr3 (330-508)||(49465619-49465797)
chr3 (406-495)||(50952347-50952436)
chr3 (374-495)||(54837001-54837122)
chr3 (393-500)||(18405792-18405900)
chr3 (393-463)||(3044258-3044328)
chr3 (409-540)||(24281064-24281197)
chr3 (399-479)||(39602193-39602273)
chr3 (393-500)||(39980730-39980838)
chr3 (450-543)||(44014715-44014810)
chr3 (468-508)||(50211811-50211851)
chr3 (452-515)||(20194980-20195043)
chr3 (379-434)||(22203417-22203472)
chr3 (402-501)||(27896131-27896230)
chr3 (402-512)||(2152128-2152238)
chr3 (401-495)||(21574499-21574593)
chr3 (399-505)||(24624217-24624323)
chr3 (393-495)||(40880915-40881017)
chr3 (409-503)||(47513670-47513764)
chr3 (424-481)||(5391911-5391968)
chr3 (414-463)||(25925764-25925813)
chr3 (319-375)||(905059-905115)
chr3 (399-491)||(20467157-20467249)
chr3 (399-463)||(20669179-20669243)
chr3 (399-439)||(24158526-24158566)
chr3 (312-368)||(25964360-25964416)
chr3 (339-504)||(36646340-36646507)
chr3 (399-463)||(40665436-40665500)
chr3 (315-375)||(41028940-41029000)
chr3 (401-444)||(2825156-2825199)
chr3 (318-357)||(16790463-16790502)
chr3 (320-375)||(34958254-34958309)
chr3 (457-508)||(50760656-50760707)
chr3 (399-429)||(24887316-24887346)
chr3 (468-542)||(25182908-25182981)
chr3 (450-508)||(25258830-25258888)
chr3 (419-493)||(33880526-33880599)
chr3 (467-542)||(47903998-47904075)
chr3 (470-508)||(50015964-50016002)
chr3 (419-493)||(53952075-53952149)
chr3 (455-508)||(2413633-2413686)
chr3 (399-500)||(3845524-3845625)
chr3 (520-553)||(16072948-16072981)
chr3 (406-495)||(23808031-23808120)
chr3 (399-444)||(24280718-24280763)
chr3 (399-428)||(44284114-44284143)
chr3 (399-496)||(50600144-50600241)
chr3 (398-508)||(52323848-52323960)
[»] chr8 (51 HSPs)
chr8 (324-493)||(42215275-42215446)
chr8 (393-509)||(39551162-39551278)
chr8 (398-496)||(12851182-12851280)
chr8 (399-508)||(11569411-11569520)
chr8 (399-463)||(20672757-20672821)
chr8 (398-484)||(26473730-26473816)
chr8 (399-493)||(30389106-30389200)
chr8 (398-495)||(7918413-7918510)
chr8 (325-412)||(926418-926508)
chr8 (400-444)||(1433556-1433600)
chr8 (393-496)||(9956779-9956883)
chr8 (450-543)||(16162818-16162913)
chr8 (399-489)||(1930042-1930133)
chr8 (274-359)||(4389826-4389908)
chr8 (393-484)||(5088853-5088944)
chr8 (419-543)||(9700028-9700154)
chr8 (401-508)||(30191095-30191202)
chr8 (399-478)||(35220707-35220786)
chr8 (398-484)||(2458544-2458630)
chr8 (417-494)||(10120781-10120859)
chr8 (313-375)||(14482121-14482183)
chr8 (399-433)||(25097393-25097427)
chr8 (441-495)||(41442420-41442474)
chr8 (312-543)||(28769256-28769491)
chr8 (393-434)||(43709274-43709315)
chr8 (399-508)||(44236777-44236886)
chr8 (468-508)||(2487962-2488002)
chr8 (399-439)||(9836877-9836917)
chr8 (333-484)||(13459585-13459737)
chr8 (393-508)||(24558854-24558967)
chr8 (356-508)||(34849065-34849220)
chr8 (417-500)||(35643949-35644033)
chr8 (399-491)||(40071756-40071848)
chr8 (312-355)||(6918949-6918992)
chr8 (399-434)||(27028838-27028873)
chr8 (325-446)||(34522070-34522195)
chr8 (468-543)||(6526169-6526246)
chr8 (333-508)||(7646145-7646322)
chr8 (398-508)||(10923602-10923712)
chr8 (465-511)||(10939448-10939494)
chr8 (334-429)||(13561345-13561442)
chr8 (399-508)||(26410286-26410396)
chr8 (399-428)||(6509337-6509366)
chr8 (401-434)||(10075579-10075612)
chr8 (402-463)||(11795102-11795163)
chr8 (399-509)||(12361199-12361311)
chr8 (450-495)||(25097433-25097478)
chr8 (393-434)||(34551121-34551162)
chr8 (455-508)||(34770931-34770984)
chr8 (348-418)||(38537545-38537617)
chr8 (470-511)||(41398059-41398100)
[»] chr1 (62 HSPs)
chr1 (403-508)||(31517694-31517799)
chr1 (399-493)||(37811859-37811953)
chr1 (333-471)||(36151496-36151636)
chr1 (321-543)||(17269177-17269403)
chr1 (398-482)||(35925696-35925780)
chr1 (332-508)||(10199362-10199540)
chr1 (401-507)||(4445717-4445823)
chr1 (402-508)||(37593638-37593744)
chr1 (400-508)||(49692006-49692112)
chr1 (316-375)||(870967-871026)
chr1 (332-444)||(35017512-35017628)
chr1 (393-479)||(25479582-25479668)
chr1 (317-447)||(4200152-4200284)
chr1 (379-508)||(7136952-7137081)
chr1 (375-463)||(7472294-7472383)
chr1 (398-487)||(24460382-24460471)
chr1 (399-508)||(33723336-33723445)
chr1 (341-489)||(3924571-3924721)
chr1 (401-508)||(6279408-6279515)
chr1 (399-541)||(172492-172639)
chr1 (393-447)||(7218089-7218143)
chr1 (315-474)||(10854654-10854815)
chr1 (393-483)||(37842334-37842424)
chr1 (401-483)||(43338125-43338207)
chr1 (403-508)||(32515395-32515500)
chr1 (467-508)||(43371845-43371886)
chr1 (401-473)||(5047155-5047227)
chr1 (401-505)||(7262475-7262579)
chr1 (398-478)||(11137851-11137930)
chr1 (399-479)||(11639399-11639479)
chr1 (393-433)||(25005826-25005866)
chr1 (393-538)||(29723490-29723637)
chr1 (398-434)||(38651459-38651495)
chr1 (393-429)||(47598454-47598490)
chr1 (399-494)||(4576812-4576907)
chr1 (401-480)||(4699597-4699676)
chr1 (417-508)||(6292518-6292608)
chr1 (399-490)||(10744308-10744399)
chr1 (316-434)||(19389824-19389943)
chr1 (406-493)||(28689421-28689508)
chr1 (375-478)||(39596580-39596682)
chr1 (401-508)||(44422708-44422815)
chr1 (454-508)||(5421898-5421952)
chr1 (411-477)||(11695880-11695946)
chr1 (406-508)||(19092338-19092439)
chr1 (450-508)||(27807173-27807231)
chr1 (450-500)||(38001654-38001704)
chr1 (401-439)||(45667785-45667823)
chr1 (428-493)||(4481966-4482031)
chr1 (399-508)||(4622100-4622209)
chr1 (468-541)||(5886911-5886982)
chr1 (467-508)||(8382416-8382457)
chr1 (375-424)||(23445317-23445366)
chr1 (393-446)||(26779941-26779994)
chr1 (398-463)||(30257689-30257754)
chr1 (339-493)||(33185927-33186082)
chr1 (325-431)||(33527178-33527286)
chr1 (450-503)||(38170649-38170702)
chr1 (399-484)||(39270403-39270488)
chr1 (455-508)||(42336678-42336731)
chr1 (318-508)||(44031953-44032145)
chr1 (316-373)||(52286600-52286657)
[»] chr2 (63 HSPs)
chr2 (331-513)||(39621890-39622072)
chr2 (398-508)||(12313127-12313237)
chr2 (375-481)||(33941892-33941998)
chr2 (339-508)||(787276-787448)
chr2 (402-495)||(33192212-33192304)
chr2 (393-508)||(35485918-35486033)
chr2 (377-508)||(40158703-40158834)
chr2 (398-508)||(38078364-38078474)
chr2 (399-484)||(35378994-35379079)
chr2 (377-484)||(42419982-42420089)
chr2 (375-500)||(1625883-1626009)
chr2 (398-492)||(15120189-15120283)
chr2 (332-447)||(43259772-43259889)
chr2 (399-463)||(1939331-1939395)
chr2 (441-508)||(5902503-5902570)
chr2 (325-429)||(10143103-10143209)
chr2 (413-542)||(43529776-43529907)
chr2 (450-508)||(1801726-1801784)
chr2 (450-508)||(4350748-4350806)
chr2 (393-439)||(9477953-9477999)
chr2 (401-463)||(34652035-34652097)
chr2 (393-439)||(36863648-36863694)
chr2 (317-508)||(11513824-11514012)
chr2 (424-493)||(13220465-13220534)
chr2 (399-508)||(16867746-16867854)
chr2 (402-495)||(32106766-32106859)
chr2 (400-489)||(33256748-33256837)
chr2 (414-491)||(38809348-38809425)
chr2 (393-434)||(39983343-39983384)
chr2 (334-447)||(4090289-4090404)
chr2 (399-439)||(10884544-10884584)
chr2 (393-500)||(20952356-20952464)
chr2 (398-434)||(24097814-24097850)
chr2 (417-542)||(28677577-28677704)
chr2 (323-492)||(28933753-28933923)
chr2 (424-484)||(31096333-31096393)
chr2 (401-493)||(41817177-41817269)
chr2 (403-475)||(44438826-44438898)
chr2 (402-500)||(750680-750779)
chr2 (402-493)||(1494415-1494506)
chr2 (399-434)||(3049981-3050016)
chr2 (401-432)||(9530758-9530789)
chr2 (406-477)||(25790140-25790211)
chr2 (467-510)||(32837398-32837441)
chr2 (375-434)||(40279180-40279239)
chr2 (521-551)||(4508312-4508342)
chr2 (317-375)||(17952790-17952848)
chr2 (393-463)||(33942151-33942221)
chr2 (393-447)||(40279408-40279462)
chr2 (332-433)||(43299430-43299535)
chr2 (403-484)||(43570425-43570506)
chr2 (401-478)||(680512-680589)
chr2 (455-508)||(1318299-1318352)
chr2 (406-483)||(1647250-1647327)
chr2 (318-375)||(3102617-3102674)
chr2 (399-484)||(9556246-9556331)
chr2 (318-355)||(26484193-26484230)
chr2 (324-414)||(33931618-33931710)
chr2 (399-484)||(35378510-35378595)
chr2 (398-471)||(43173228-43173301)
chr2 (339-500)||(43279488-43279652)
chr2 (318-375)||(43530200-43530257)
chr2 (393-434)||(43985031-43985072)
[»] chr6 (36 HSPs)
chr6 (339-505)||(33887775-33887943)
chr6 (375-500)||(20368142-20368267)
chr6 (399-483)||(31624097-31624181)
chr6 (342-434)||(31776303-31776396)
chr6 (317-489)||(9093528-9093704)
chr6 (376-434)||(31812041-31812099)
chr6 (325-374)||(3171521-3171570)
chr6 (398-495)||(8035115-8035212)
chr6 (399-504)||(31686321-31686426)
chr6 (399-508)||(32171337-32171446)
chr6 (399-500)||(33089513-33089614)
chr6 (325-434)||(4006645-4006756)
chr6 (316-429)||(4248880-4248995)
chr6 (399-463)||(6647394-6647458)
chr6 (378-446)||(7945900-7945967)
chr6 (318-370)||(31668779-31668831)
chr6 (398-491)||(103437-103530)
chr6 (399-508)||(34403862-34403971)
chr6 (401-493)||(2263201-2263293)
chr6 (339-495)||(2735014-2735173)
chr6 (399-479)||(28641732-28641812)
chr6 (398-510)||(32386515-32386627)
chr6 (399-510)||(769146-769256)
chr6 (322-373)||(32861356-32861407)
chr6 (425-483)||(1575928-1575986)
chr6 (399-465)||(4246417-4246483)
chr6 (399-493)||(4324423-4324516)
chr6 (401-463)||(4420652-4420714)
chr6 (450-500)||(9202952-9203002)
chr6 (322-376)||(33259744-33259798)
chr6 (312-417)||(33826780-33826884)
chr6 (318-375)||(3217279-3217336)
chr6 (323-429)||(6654544-6654652)
chr6 (459-508)||(10353715-10353764)
chr6 (399-504)||(33116591-33116696)
chr6 (419-508)||(35070421-35070510)
[»] chr5 (40 HSPs)
chr5 (312-429)||(912681-912801)
chr5 (339-486)||(17368621-17368770)
chr5 (312-489)||(39105381-39105562)
chr5 (399-508)||(17258837-17258946)
chr5 (312-432)||(18543226-18543349)
chr5 (333-483)||(18857377-18857531)
chr5 (398-502)||(37611175-37611279)
chr5 (398-502)||(37787905-37788009)
chr5 (399-486)||(13604825-13604912)
chr5 (393-507)||(2568659-2568773)
chr5 (399-479)||(21768180-21768260)
chr5 (393-508)||(12459955-12460070)
chr5 (310-368)||(11684339-11684397)
chr5 (450-508)||(25720371-25720429)
chr5 (403-508)||(4619718-4619823)
chr5 (325-457)||(4014429-4014563)
chr5 (375-502)||(6587067-6587194)
chr5 (312-375)||(20982224-20982287)
chr5 (393-500)||(37526161-37526268)
chr5 (393-500)||(37588322-37588429)
chr5 (454-508)||(499685-499739)
chr5 (399-489)||(11707062-11707152)
chr5 (316-446)||(31694440-31694572)
chr5 (399-508)||(33533494-33533602)
chr5 (401-505)||(10125675-10125779)
chr5 (393-500)||(29925842-29925950)
chr5 (399-499)||(36638754-36638854)
chr5 (362-434)||(10272459-10272533)
chr5 (317-368)||(10391276-10391327)
chr5 (399-434)||(40731476-40731511)
chr5 (312-446)||(12425488-12425625)
chr5 (393-463)||(14674899-14674969)
chr5 (393-463)||(15308992-15309062)
chr5 (312-374)||(19177397-19177459)
chr5 (399-429)||(38047888-38047918)
chr5 (398-428)||(40205108-40205138)
chr5 (317-374)||(1961915-1961972)
chr5 (399-491)||(28777000-28777093)
chr5 (399-472)||(41957441-41957514)
chr5 (325-431)||(42646846-42646954)
[»] chr7 (41 HSPs)
chr7 (326-508)||(28165023-28165207)
chr7 (325-479)||(12110291-12110447)
chr7 (317-434)||(47941243-47941365)
chr7 (316-429)||(39169449-39169563)
chr7 (402-501)||(27626084-27626183)
chr7 (399-500)||(20526453-20526555)
chr7 (398-508)||(25670540-25670650)
chr7 (331-434)||(46945846-46945951)
chr7 (274-434)||(48131231-48131390)
chr7 (399-463)||(529382-529446)
chr7 (398-542)||(28691754-28691899)
chr7 (377-440)||(39542322-39542385)
chr7 (375-446)||(44821942-44822013)
chr7 (379-513)||(752956-753090)
chr7 (406-507)||(3836638-3836738)
chr7 (401-446)||(25596042-25596087)
chr7 (407-508)||(33894642-33894743)
chr7 (423-508)||(44808189-44808274)
chr7 (310-502)||(5628526-5628720)
chr7 (399-491)||(7244687-7244779)
chr7 (393-484)||(39967921-39968013)
chr7 (398-434)||(48917374-48917410)
chr7 (379-434)||(3968785-3968840)
chr7 (417-508)||(22387850-22387941)
chr7 (399-434)||(27378856-27378891)
chr7 (316-375)||(35536029-35536088)
chr7 (318-357)||(45078217-45078256)
chr7 (321-428)||(3610774-3610883)
chr7 (312-374)||(5373143-5373205)
chr7 (454-508)||(8094368-8094422)
chr7 (467-536)||(13960648-13960718)
chr7 (425-483)||(15740390-15740448)
chr7 (339-434)||(17989051-17989148)
chr7 (317-367)||(22388001-22388051)
chr7 (450-508)||(36537966-36538024)
chr7 (333-423)||(1417203-1417295)
chr7 (401-494)||(22551373-22551466)
chr7 (393-434)||(24363629-24363670)
chr7 (401-434)||(30723067-30723100)
chr7 (318-375)||(45593808-45593865)
chr7 (393-434)||(46104595-46104636)
[»] scaffold0022 (1 HSPs)
scaffold0022 (316-368)||(143157-143209)
[»] scaffold0590 (1 HSPs)
scaffold0590 (319-375)||(1163-1219)
[»] scaffold0508 (1 HSPs)
scaffold0508 (315-375)||(9864-9924)
[»] scaffold0275 (1 HSPs)
scaffold0275 (319-375)||(2756-2812)
[»] scaffold0654 (1 HSPs)
scaffold0654 (317-375)||(6726-6784)
[»] scaffold0014 (1 HSPs)
scaffold0014 (317-375)||(116645-116703)
[»] scaffold0608 (1 HSPs)
scaffold0608 (428-493)||(9606-9671)
[»] scaffold0003 (1 HSPs)
scaffold0003 (398-479)||(306332-306413)


Alignment Details
Target: chr4 (Bit Score: 1241; Significance: 0; HSPs: 43)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 1241; E-Value: 0
Query Start/End: Original strand, 18 - 1396
Target Start/End: Complemental strand, 50743286 - 50741903
Alignment:
Q  18 acaaaaatcttcgccgtttcaattcccccatcgatgaatcctccgatactctcgccgatttcaacattaccggtaataatctctattattattgattaat 117  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  50743286 acaaaaatcttcgccgtttcaattcccccatcgatgaatcctccgatactctcgccgatttcaacattaccggtaataatctctattattattgattaat 50743187  T
Q  118 tggtttgcgaattgcaattaacttcagttatgttatttctttgcaaacatgcattcatgcatgctgataaggtcaataaaatagattaaggctctcttta 217  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  50743186 tggtttgcgaattgcaattaacttcagttatgttatttctttgcaaacatgcattcatgcatgctgataaggtcaataaaatagattaaggctctcttta 50743087  T
Q  218 gttacacaactaaattaagtgttcattagcataaacgcttatcatataatgtcatctt------tggataaataacttaatttgcaacttacatcataag 311  Q
     |||||||||||||||||||||||||||||||||||||||||||||||||||||||||      ||||||||||||||||||||||||||||||||||||    
T  50743086 tttacacaactaaattaagtgttcattagcataaacgcttatcatataatgtcatcttcatctttggataaataacttaatttgcaacttacatcataag 50742987  T
Q  312 aagtgcttatcatataagcgcttatggataagctatttttataacacaacataaaattaagtcattgtttttgtataataaataacttgttttcataagc 411  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  50742986 aagtgcttatcatataagcgcttatggataagctatttttataacacaacataaaattaagtcattgtttttgtataataaataacttgttttcataagc 50742887  T
Q  412 tatcctggagagcttatgaaaatgagtttaaaacagggtatgaacatgtcatgaactgttttcataagttctctcaaacagtctaacaagtgcttataca 511  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  50742886 tatcctggagagcttatgaaaatgagttgaaaacagggtatgaacatgtcatgaactgttttcataagttctctcaaacagtctaacaagtgcttataca 50742787  T
Q  512 agaatagcctcaaataagtcaatccaaacaggtcgtaagtgtttatatattaacaatcttccagagctcatggaaatgagctgaaaacatgtccatacat 611  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  50742786 agaatagcctcaaataagtcaatccaaacaggtcgtaagtgtttatatattaacaatcttccagagctcatggaaatgagctgaaaacatgtccatacat 50742687  T
Q  612 tgttttcataagttctcctacacaatttcactaatgcttatgtgagtatgtaagttcaaatgagccaatataaacatggcttatttatttacttttgcag 711  Q
    |||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  50742686 tgttgtcataagttctcctacacaatttcacaaatgcttatgtgagtatgtaagttcaaatgagccaatataaacatggcttatttatttacttttgcag 50742587  T
Q  712 aagaagaaaatgggtttttctttggtctagcgacagcaccggcacatgttgaagacaggcttgatgatgcttggattcagtttgctgaacaagagagtgt 811  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  50742586 aagaagaaaatgggtttttctttggtctagcgacagcaccggcgcatgttgaagacaggcttgatgatgcttggattcagtttgctgaacaagagagtgt 50742487  T
Q  812 tgccggtgctgagcagaaagtagatgctttgatgggctctgccactgctgatggtgggtctcaacaagccgtatcatctgcacaacgagggcttaagggt 911  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  50742486 tgccggtgctgagcagaaagtagatgctttgatgggctctgccactgctgatggtgggtctcaacaagccgtatcatctgcacaacgagggcttaagggt 50742387  T
Q  912 aacaagaagtctcttaaggtagctatggaggccatgatcagaggatttgagaaatacatggaagtagatggacaggaaggagaagaaga---agaacaca 1008  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||   ||||||||    
T  50742386 aacaaaaagtctcttaaggtagctatggaggccatgatcagaggatttgagaagtacatggaagtagatggacaggaaggagaagaagaagaagaacaca 50742287  T
Q  1009 ttcctaatgtaactgcttggcataatgttccacacccgtaagctctcacttgcnnnnnnnnnnnnaatgtcatttgcagtcaacattggattttgaagtg 1108  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||            |||||||||||||||||||||||||||||||||||    
T  50742286 ttcctaatgtaactgcttggcataatgttccacacccgtaagctctcacttgctttttgttttttaatgtcatttgcagtcaacattggattttgaagtg 50742187  T
Q  1109 aaagggacggcgggttttcattgtaagctaatattgttgtcaaggattgcattgcatttctgtatatttctttgtatgtcaagactttacagaagattct 1208  Q
    ||||    ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  50742186 aaag----ggcaggttttcattgtaagctaatattgttgtcaaggattgcattgcatttctgtatatttctttgtatgtcaagactttacagaagattct 50742091  T
Q  1209 agccatacaagatatggtagttacaaataaatggtatcctcctaatacaatcaatcagaatcaatgaatttgtaacaaatcaaggctgaagatattgtaa 1308  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  50742090 agccatacaagatatggtagttacaaataaatggtatcctcctaatacaatcaatcagaatcaatgaatttgtaacaaatcaaggctgaagatattgtaa 50741991  T
Q  1309 catnnnnnnnttaaactcaagtcactgtggagtaaaccaacttgattatggaaaccaaagtctacaaatgtttaggtgtatgatgatg 1396  Q
    |||       ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  50741990 catcccccccttaaactcaagtcactgtggagtaaaccaacttgattatggaaaccaaagtctacaaatgtttaggtgtatgaggatg 50741903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 61; E-Value: 2e-25
Query Start/End: Original strand, 331 - 508
Target Start/End: Original strand, 2996510 - 2996689
Alignment:
Q  331 gcttatggataagctatttttataacacaacataaaattaagtca--ttgtttttgtataataaataacttgttttcataagctatcctggagagcttat 428  Q
    ||||||| |||||||| ||  |||||| || |||||||  |||||  |||||||| |||||   |||| |||||||||||||||||| |||||||| |||    
T  2996510 gcttatgaataagctacttcgataacataagataaaatacagtcaaattgtttttatataagttataagttgttttcataagctatcttggagagcgtat 2996609  T
Q  429 gaaaatgagtttaaaacagggtatgaacatgtcatgaactgttttcataagttctctcaaacagtctaacaagtgcttat 508  Q
    |||||| |||| |||| ||  |||| ||||||||| |  |||||||||||| ||||||||||||||| | ||||||||||    
T  2996610 gaaaataagttgaaaaaagcttatggacatgtcataagttgttttcataagctctctcaaacagtctcaaaagtgcttat 2996689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 319 - 434
Target Start/End: Complemental strand, 8422982 - 8422867
Alignment:
Q  319 tatcatataagcgcttatggataagctatttttataacacaacataaaattaagtcattgtttttgtataataaataacttgttttcataagctatcctg 418  Q
    ||||||||| | ||||||| ||||||||||||||||| | || ||||||| |||||||||||||  |||||   |||| ||||||||| || ||||| ||    
T  8422982 tatcatatatgtgcttatgtataagctatttttataaaaaaagataaaataaagtcattgttttcatataagctataagttgttttcacaatctatcttg 8422883  T
Q  419 gagagcttatgaaaat 434  Q
    ||||| ||||| ||||    
T  8422882 gagagtttatgcaaat 8422867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 40; E-Value: 0.0000000000005
Query Start/End: Original strand, 327 - 503
Target Start/End: Original strand, 1137645 - 1137823
Alignment:
Q  327 aagcgcttatggataagctatttttataacacaacataaaattaagtcat--tgtttttgtataataaataacttgttttcataagctatcctggagagc 424  Q
    ||||||||||| |||| |||||| ||||| || | ||||||| |||||||  | |||||| |||||  ||||  || |||||||| ||||||  ||||||    
T  1137645 aagcgcttatgaataaactatttctataataccatataaaataaagtcatattatttttgaataatctataagctgctttcataaactatccaagagagc 1137744  T
Q  425 ttatgaaaatgagtttaaaacagggtatgaacatgtcatgaactgttttcataagttctctcaaacagtctaacaagtg 503  Q
    ||||| |||| |  | ||||||   |||||||||||||| |  |||||||||||||||||  ||||||| | |||||||    
T  1137745 ttatggaaataaactgaaaacaacttatgaacatgtcataagatgttttcataagttctcctaaacagtgtcacaagtg 1137823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 40; E-Value: 0.0000000000005
Query Start/End: Original strand, 377 - 508
Target Start/End: Complemental strand, 7694095 - 7693965
Alignment:
Q  377 tgtttttgtataataaataacttgttttcataagctatcctggagagcttatgaaaatgagtttaaaacagggtatgaacatgtcatgaactgttttcat 476  Q
    |||||||||||||   ||||  |||||||||||| |||||||||||| ||||| |||| || | ||||||   |||||||||||||| ||||  ||||||    
T  7694095 tgtttttgtataagctataagctgttttcataagttatcctggagagtttatggaaataagctgaaaacaacttatgaacatgtcattaact-atttcat 7693997  T
Q  477 aagttctctcaaacagtctaacaagtgcttat 508  Q
    ||||| || |||||| ||| | ||||||||||    
T  7693996 aagttttcacaaacaatcttagaagtgcttat 7693965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 40; E-Value: 0.0000000000005
Query Start/End: Original strand, 375 - 494
Target Start/End: Complemental strand, 28300386 - 28300267
Alignment:
Q  375 attgtttttgtataataaataacttgttttcataagctatcctggagagcttatgaaaatgagtttaaaacagggtatgaacatgtcatgaactgttttc 474  Q
    |||||||||||||||   ||||  | |||||||| |||||| || ||||||||||||||| |||| ||||||   || |||||||||||   ||||||||    
T  28300386 attgtttttgtataagctataaactattttcataggctatcttgaagagcttatgaaaataagttgaaaacaacttaagaacatgtcataggctgttttc 28300287  T
Q  475 ataagttctctcaaacagtc 494  Q
    |||| ||||||||| |||||    
T  28300286 ataaattctctcaatcagtc 28300267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 375 - 500
Target Start/End: Complemental strand, 50681176 - 50681050
Alignment:
Q  375 attgtttttgtataataaataacttgttttcataagctatcctggagagcttatgaaaatgagtttaaaacagggtatgaacat-gtcatgaactgtttt 473  Q
    ||||||||||||||    |||| ||||||  |||||||||  ||||||  |||||||||| | || |||| ||  |||||| || ||||| |||||||||    
T  50681176 attgtttttgtatatgctataagttgtttatataagctatattggagaaattatgaaaataaattgaaaaaagcttatgaaaattgtcattaactgtttt 50681077  T
Q  474 cataagttctctcaaacagtctaacaa 500  Q
    |||||||||||||||||||||| ||||    
T  50681076 cataagttctctcaaacagtctcacaa 50681050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 38; E-Value: 0.000000000009
Query Start/End: Original strand, 340 - 434
Target Start/End: Original strand, 17884014 - 17884110
Alignment:
Q  340 taagctatttttataacacaacataaaattaagtca--ttgtttttgtataataaataacttgttttcataagctatcctggagagcttatgaaaat 434  Q
    |||||||||| ||||||| || ||||||| |||| |  ||||||||||||||   || | |||||||||||||||||  ||||||||||||||||||    
T  17884014 taagctatttctataacaaaagataaaataaagttaaattgtttttgtataagttatcagttgttttcataagctatattggagagcttatgaaaat 17884110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 326 - 463
Target Start/End: Complemental strand, 6466184 - 6466045
Alignment:
Q  326 taagcgcttatggataagctatttttataacacaacataaaattaagtca--ttgtttttgtataataaataacttgttttcataagctatcctggagag 423  Q
    |||||||||||| ||||| | ||| |||||||||| || |||| |||| |  || ||||||||||||  |||| |||||| |||||||||| || |||||    
T  6466184 taagcgcttatgaataagttgtttatataacacaagatcaaataaagtgaaattctttttgtataatctataagttgtttccataagctattctagagag 6466085  T
Q  424 cttatgaaaatgagtttaaaacagggtatgaacatgtcat 463  Q
     ||||| |||| |||| |||| ||  ||||||||| ||||    
T  6466084 attatggaaataagttgaaaatagcttatgaacatctcat 6466045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 340 - 481
Target Start/End: Complemental strand, 20936353 - 20936210
Alignment:
Q  340 taagctatttttataacacaacataaaattaagtca--ttgtttttgtataataaataacttgttttcataagctatcctggagagcttatgaaaatgag 437  Q
    |||||||| | |||||| |||  |||||| ||||||  |||||||| ||||||  |||  |||||||||||  ||||||||||||| ||||| |||| ||    
T  20936353 taagctatatctataacgcaaggtaaaatgaagtcaaattgtttttatataatctataggttgttttcatattctatcctggagagattatggaaataag 20936254  T
Q  438 tttaaaacagggtatgaacatgtcatgaactgttttcataagtt 481  Q
     | |||||||  ||||||||| |||| |  ||||||||||||||    
T  20936253 gtgaaaacagcttatgaacatatcataagttgttttcataagtt 20936210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 317 - 428
Target Start/End: Original strand, 3891500 - 3891611
Alignment:
Q  317 cttatcatataagcgcttatggataagctatttttataacacaacataaaattaagtc--attgtttttgtataataaataacttgttttcataagctat 414  Q
    ||||||||||||| ||||||| |||| |||||| |||||||  |  |||||| |||||  |  ||||||||||||||  ||| ||||||| |||||||||    
T  3891500 cttatcatataagtgcttatgaataaactatttctataacagga--taaaataaagtcgaaccgtttttgtataatatgtaagttgtttttataagctat 3891597  T
Q  415 cctggagagcttat 428  Q
    ||| ||||||||||    
T  3891598 cctagagagcttat 3891611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 406 - 503
Target Start/End: Complemental strand, 17751200 - 17751106
Alignment:
Q  406 ataagctatcctggagagcttatgaaaatgagtttaaaacagggtatgaacatgtcatgaactgttttcataagttctctcaaacagtctaacaagtg 503  Q
    |||||||||| || ||||||||||||||| || ||||||||   |||||||||||| | | |||||||||  ||||||  |||||||||| |||||||    
T  17751200 ataagctatcttgcagagcttatgaaaataagcttaaaaca---tatgaacatgtcgtaagctgttttcaagagttcttccaaacagtctcacaagtg 17751106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 399 - 502
Target Start/End: Complemental strand, 21043298 - 21043195
Alignment:
Q  399 tgttttcataagctatcctggagagcttatgaaaatgagtttaaaacagggtatgaacatgtcatgaactgttttcataagttctctcaaacagtctaac 498  Q
    |||||||||||||||||||| ||||| |||||||||    | |||||||  ||||||| |||||| | |||||| |||||  |||| |||||||||| ||    
T  21043298 tgttttcataagctatcctgaagagcatatgaaaatacactgaaaacagcttatgaacgtgtcataagctgtttccataacctctcccaaacagtctcac 21043199  T
Q  499 aagt 502  Q
    ||||    
T  21043198 aagt 21043195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 465 - 508
Target Start/End: Original strand, 22471347 - 22471390
Alignment:
Q  465 aactgttttcataagttctctcaaacagtctaacaagtgcttat 508  Q
    |||||||||||||||||||| |||||||||| ||||||||||||    
T  22471347 aactgttttcataagttctcccaaacagtctcacaagtgcttat 22471390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.0000000005
Query Start/End: Original strand, 399 - 500
Target Start/End: Original strand, 1706629 - 1706731
Alignment:
Q  399 tgttttcataagctatcctggagagcttatgaaaatgagtttaaaacagggtatgaac-atgtcatgaactgttttcataagttctctcaaacagtctaa 497  Q
    ||||||||||| ||||| |||| ||||||||||||| ||||  ||| ||  ||||||| ||| ||| | |||||||||||| ||||||||||| |||| |    
T  1706629 tgttttcataaactatcttggacagcttatgaaaataagttggaaatagcttatgaacaatgccataagctgttttcataatttctctcaaaccgtctca 1706728  T
Q  498 caa 500  Q
    |||    
T  1706729 caa 1706731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.0000000005
Query Start/End: Original strand, 467 - 509
Target Start/End: Original strand, 4071953 - 4071995
Alignment:
Q  467 ctgttttcataagttctctcaaacagtctaacaagtgcttata 509  Q
    ||||||||||||| ||||||||||||||| |||||||||||||    
T  4071953 ctgttttcataagctctctcaaacagtctcacaagtgcttata 4071995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.0000000005
Query Start/End: Original strand, 339 - 446
Target Start/End: Original strand, 10192229 - 10192337
Alignment:
Q  339 ataagctatttttataacacaacataaaattaagtca--ttgtttttgtataataaataacttgttttcataagctatcctggagagcttatgaaaatga 436  Q
    |||| |||||||||||||| || ||| ||| ||||||  |||||||  |||||   |||| ||||||||| ||||||||||||||||| ||||||||| |    
T  10192229 ataaactatttttataacaaaagatagaataaagtcaaattgttttcatataagttataagttgttttcaaaagctatcctggagagc-tatgaaaataa 10192327  T
Q  437 gtttaaaaca 446  Q
    ||| ||||||    
T  10192328 gttgaaaaca 10192337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.0000000005
Query Start/End: Original strand, 393 - 463
Target Start/End: Original strand, 11264302 - 11264372
Alignment:
Q  393 ataacttgttttcataagctatcctggagagcttatgaaaatgagtttaaaacagggtatgaacatgtcat 463  Q
    |||| |||||||||||||| ||||| ||||||||||| |||| |||| |||||||  |||| |||||||||    
T  11264302 ataagttgttttcataagccatcctagagagcttatggaaataagttgaaaacagtttatggacatgtcat 11264372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 455 - 508
Target Start/End: Complemental strand, 3549562 - 3549509
Alignment:
Q  455 acatgtcatgaactgttttcataagttctctcaaacagtctaacaagtgcttat 508  Q
    |||||||||  ||| |||||||||||||||||||||||||| | ||||||||||    
T  3549562 acatgtcatacactattttcataagttctctcaaacagtctcataagtgcttat 3549509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 398 - 503
Target Start/End: Complemental strand, 4798630 - 4798525
Alignment:
Q  398 ttgttttcataagctatcctggagagcttatgaaaatgagtttaaaacagggtatgaacatgtcatgaactgttttcataagttctctcaaacagtctaa 497  Q
    |||||||||||||||||| ||||||||||||| |||| || | |||||||  |||| ||||||||  | | |||| |||||| |||  | |||||||| |    
T  4798630 ttgttttcataagctatcttggagagcttatgcaaataagctcaaaacagcttatgtacatgtcagaagccgtttccataagctcttcctaacagtctca 4798531  T
Q  498 caagtg 503  Q
    ||||||    
T  4798530 caagtg 4798525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 310 - 508
Target Start/End: Original strand, 21157684 - 21157884
Alignment:
Q  310 agaagtgcttatcatataagcgcttatggataagctatttttataacacaacataaaattaagtcat--tgtttttgtataataaataacttgttttcat 407  Q
    ||||||| |||||||||||| ||||||| || ||||||||| |||||| |  ||||| | ||||||   ||||||  | |||   ||||  |||||||||    
T  21157684 agaagtgtttatcatataagtgcttatgtatcagctattttgataacaaagtataaactaaagtcaaactgttttcatgtaagctataagatgttttcat 21157783  T
Q  408 aagctatcctggagagcttatgaaaatgagtttaaaacagggtatgaacatgtcatgaactgttttcataagttctctcaaacagtctaacaagtgctta 507  Q
    | ||||||||| |||||||||| |||| || | |||||||  | || | ||||||| | ||||||   |||| |||  |||||||||| |||||||||||    
T  21157784 atgctatcctgaagagcttatggaaataagctaaaaacagcttttgtaaatgtcataagctgtttctgtaagctcttccaaacagtcttacaagtgctta 21157883  T
Q  508 t 508  Q
    |    
T  21157884 t 21157884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 318 - 375
Target Start/End: Complemental strand, 51556013 - 51555956
Alignment:
Q  318 ttatcatataagcgcttatggataagctatttttataacacaacataaaattaagtca 375  Q
    |||||||||||| ||||||| |||||||||| |||||||| || ||||||| ||||||    
T  51556013 ttatcatataagtgcttatgtataagctattattataacaaaagataaaataaagtca 51555956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 393 - 484
Target Start/End: Complemental strand, 17822934 - 17822842
Alignment:
Q  393 ataacttgttttcataagctatcctggagagcttatgaaaatgagtttaaaacagggtatg-aacatgtcatgaactgttttcataagttctc 484  Q
    |||| |||||||||||||||||| |||||| ||||||||||| || | |||| ||  |||| || ||||||| | ||||||||||| ||||||    
T  17822934 ataagttgttttcataagctatcttggagaacttatgaaaataagctaaaaaaagcttatgaaaaatgtcataagctgttttcatatgttctc 17822842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 398 - 429
Target Start/End: Original strand, 7730630 - 7730661
Alignment:
Q  398 ttgttttcataagctatcctggagagcttatg 429  Q
    ||||||||||||||||||||||||||||||||    
T  7730630 ttgttttcataagctatcctggagagcttatg 7730661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 398 - 429
Target Start/End: Complemental strand, 11262827 - 11262796
Alignment:
Q  398 ttgttttcataagctatcctggagagcttatg 429  Q
    ||||||||||||||||||||||||||||||||    
T  11262827 ttgttttcataagctatcctggagagcttatg 11262796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 406 - 508
Target Start/End: Complemental strand, 36577599 - 36577496
Alignment:
Q  406 ataagctatcctggagagcttatgaaaatgagtttaaaa-cagggtatgaacatgtcatgaactgttttcataagttctctcaaacagtctaacaagtgc 504  Q
    ||||||||||  ||||| ||||||||||||| || |||| |||  | |||||||||||| |  ||||||  |||||||||  ||||||||| ||||||||    
T  36577599 ataagctatctgggagaacttatgaaaatgaattgaaaaacagcatttgaacatgtcataagttgtttttgtaagttctccgaaacagtctcacaagtgc 36577500  T
Q  505 ttat 508  Q
    ||||    
T  36577499 ttat 36577496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 399 - 434
Target Start/End: Complemental strand, 39063710 - 39063675
Alignment:
Q  399 tgttttcataagctatcctggagagcttatgaaaat 434  Q
    |||||| |||||||||||||||||||||||||||||    
T  39063710 tgtttttataagctatcctggagagcttatgaaaat 39063675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 395 - 434
Target Start/End: Complemental strand, 51044547 - 51044508
Alignment:
Q  395 aacttgttttcataagctatcctggagagcttatgaaaat 434  Q
    ||||||||||||||||||||||| |||| |||||||||||    
T  51044547 aacttgttttcataagctatcctagagaacttatgaaaat 51044508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 322 - 500
Target Start/End: Original strand, 1965868 - 1966048
Alignment:
Q  322 catataagcgcttatggataagctatttttataacacaacataaaattaag-tca--ttgtttttgtataataaataacttgttttcataagctatcctg 418  Q
    |||||||| ||||||| |||| |||||| |||| ||||| | |||| |||  |||  |||| | ||||||||  |||| || |||| ||||||||||||     
T  1965868 catataagtgcttatgaataaactatttctatagcacaagagaaaaataaactcaaattgtctgtgtataatttataagttatttttataagctatccta 1965967  T
Q  419 gagagcttatgaaaatgagtttaaaacagggtatgaacatgtcatgaactgttttcataagttctctcaaacagtctaacaa 500  Q
    || | ||| || |||| |||| |||||||  |||||||||||||| |  |||||||||||| || || ||||||||| ||||    
T  1965968 gaaatcttctggaaataagttaaaaacagcttatgaacatgtcataagttgttttcataagctc-ctaaaacagtctcacaa 1966048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 410 - 500
Target Start/End: Complemental strand, 6987793 - 6987703
Alignment:
Q  410 gctatcctggagagcttatgaaaatgagtttaaaacagggtatgaacatgtcatgaactgttttcataagttctctcaaacagtctaacaa 500  Q
    |||||||||||||||||||| |||| |||| |||| ||  |||| ||||||||| |  ||| | |||||| |||| |||||||||| ||||    
T  6987793 gctatcctggagagcttatggaaataagttgaaaatagtttatggacatgtcataagttgtatccataagctctcccaaacagtctcacaa 6987703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 399 - 500
Target Start/End: Original strand, 24169270 - 24169372
Alignment:
Q  399 tgttttcataagctatcctggagagcttatgaaaatgagtttaaaacagggtatg-aacatgtcatgaactgttttcataagttctctcaaacagtctaa 497  Q
    |||||||| |||||||| |||||||||||||||||| |||| |||| |   |||| || ||||||| | || |||| | ||||||||||||| ||||| |    
T  24169270 tgttttcacaagctatcttggagagcttatgaaaataagttgaaaaaatcttatgaaaaatgtcataagctatttttaaaagttctctcaaatagtctca 24169369  T
Q  498 caa 500  Q
    |||    
T  24169370 caa 24169372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 468 - 502
Target Start/End: Complemental strand, 32278403 - 32278369
Alignment:
Q  468 tgttttcataagttctctcaaacagtctaacaagt 502  Q
    ||||||||||||| |||||||||||||||||||||    
T  32278403 tgttttcataagtactctcaaacagtctaacaagt 32278369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 319 - 357
Target Start/End: Complemental strand, 32920543 - 32920505
Alignment:
Q  319 tatcatataagcgcttatggataagctatttttataaca 357  Q
    ||||||||||| | |||||||||||||||||||||||||    
T  32920543 tatcatataagtgtttatggataagctatttttataaca 32920505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 321 - 375
Target Start/End: Original strand, 47970245 - 47970299
Alignment:
Q  321 tcatataagcgcttatggataagctatttttataacacaacataaaattaagtca 375  Q
    ||||||||| ||||||| ||||||||||| ||||||| || ||||||| ||||||    
T  47970245 tcatataagtgcttatgtataagctatttctataacaaaagataaaatgaagtca 47970299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 425 - 503
Target Start/End: Complemental strand, 48719428 - 48719350
Alignment:
Q  425 ttatgaaaatgagtttaaaacagggtatgaacatgtcatgaactgttttcataagttctctcaaacagtctaacaagtg 503  Q
    |||||||||| || | |||||||  || ||||||||||| |||  ||||||||||||| |||||||| ||| |||||||    
T  48719428 ttatgaaaataagctgaaaacagcttacgaacatgtcataaaccattttcataagttccctcaaacaatctcacaagtg 48719350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 375 - 508
Target Start/End: Complemental strand, 52746927 - 52746793
Alignment:
Q  375 attgtttttgtataataaataacttgttttcataagctatcctggagagcttatgaaaatgagtttaaaacagggtatgaacatgtcatgaactgttttc 474  Q
    ||||||||||| |||   ||||  ||||||||||||||||| || |  |||||||||||| || | |||||||  |||||||||||| | | |||||| |    
T  52746927 attgtttttgtgtaagccataagctgttttcataagctatcttgtaaggcttatgaaaatcagctgaaaacagcttatgaacatgtcttaagctgtttcc 52746828  T
Q  475 ata-agttctctcaaacagtctaacaagtgcttat 508  Q
    ||| |||| | ||||  ||||| ||||||||||||    
T  52746827 atatagttttatcaactagtctcacaagtgcttat 52746793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 341 - 541
Target Start/End: Original strand, 679663 - 679865
Alignment:
Q  341 aagctatttttataacacaacataaaattaagtca--ttgttttt-gtataataaataacttgttttcataagctatcctgga-gagcttatgaaaatga 436  Q
    ||||||||| ||||| | || |||||||||||| |  |||||||| |||||| | |||| ||||  ||||||| |||| || | ||||||||||||||      
T  679663 aagctatttctataataaaatataaaattaagttaaattgttttttgtataagatataagttgtagtcataagatatcttgtaagagcttatgaaaatat 679762  T
Q  437 gtttaaaacagggtatgaacatgtcatgaactgttttcataagttctctcaaacagtctaacaagtgcttatacaagaatagcctcaaataagtcaatcc 536  Q
    | | |||||||  ||||||||| |||| |  ||||||||||| ||||  |||  |||||  ||||||||||||| || |||  ||||||| |||||||||    
T  679763 gctgaaaacagtttatgaacatatcataagatgttttcataacttctaccaagtagtct-ccaagtgcttataccag-ataagctcaaattagtcaatcc 679860  T
Q  537 aaaca 541  Q
    |||||    
T  679861 aaaca 679865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 450 - 495
Target Start/End: Complemental strand, 1555020 - 1554975
Alignment:
Q  450 tatgaacatgtcatgaactgttttcataagttctctcaaacagtct 495  Q
    |||||||||||||| | || ||||||||| ||||||||||||||||    
T  1555020 tatgaacatgtcataagctattttcataaattctctcaaacagtct 1554975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 312 - 357
Target Start/End: Complemental strand, 2980623 - 2980578
Alignment:
Q  312 aagtgcttatcatataagcgcttatggataagctatttttataaca 357  Q
    ||||| |||||||||||| ||||||| ||||||||||| |||||||    
T  2980623 aagtgtttatcatataagtgcttatgtataagctatttctataaca 2980578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 318 - 367
Target Start/End: Original strand, 4191663 - 4191712
Alignment:
Q  318 ttatcatataagcgcttatggataagctatttttataacacaacataaaa 367  Q
    |||||||||||| ||||||| ||||||||||| ||||||| || ||||||    
T  4191663 ttatcatataagtgcttatgtataagctatttctataacaaaagataaaa 4191712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 406 - 463
Target Start/End: Original strand, 19422412 - 19422469
Alignment:
Q  406 ataagctatcctggagagcttatgaaaatgagtttaaaacagggtatgaacatgtcat 463  Q
    |||| ||||||||||||||||||| |||| |||| |||| || ||||| |||||||||    
T  19422412 ataaactatcctggagagcttatggaaataagttgaaaaaagcgtatgcacatgtcat 19422469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 312 - 357
Target Start/End: Original strand, 46796936 - 46796981
Alignment:
Q  312 aagtgcttatcatataagcgcttatggataagctatttttataaca 357  Q
    ||||||||||||||||||  |||||| |||||||||||| ||||||    
T  46796936 aagtgcttatcatataagttcttatgcataagctattttcataaca 46796981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 467 - 500
Target Start/End: Complemental strand, 49940161 - 49940128
Alignment:
Q  467 ctgttttcataagttctctcaaacagtctaacaa 500  Q
    ||||||||||||||||||||||||||||| ||||    
T  49940161 ctgttttcataagttctctcaaacagtctcacaa 49940128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 58; Significance: 1e-23; HSPs: 56)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 58; E-Value: 1e-23
Query Start/End: Original strand, 324 - 508
Target Start/End: Original strand, 44295462 - 44295643
Alignment:
Q  324 tataagcgcttatggataagctatttttataacacaacataaaattaagtcattgtttttgtataataaataacttgttttcataagctatcctggagag 423  Q
    ||||||||||| || ||||||||||| |||||| ||| ||||||| || ||||| ||||| ||||||  |||| ||||||||||||| |||   ||||||    
T  44295462 tataagcgcttgtgaataagctatttctataactcaagataaaataaaatcatttttttt-tataatctataagttgttttcataagatatatcggagag 44295560  T
Q  424 cttatgaaaatgagtttaaaacagggtatgaacatgtcatgaactgttttcataagttctctcaaacagtctaacaagtgcttat 508  Q
    |||||| |||| || | |||||||  ||| ||  |||||||||  ||||||||||||||||||||| ||| | ||||||||||||    
T  44295561 cttatggaaataagctgaaaacagaatataaa--tgtcatgaatagttttcataagttctctcaaatagtatcacaagtgcttat 44295643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 53; E-Value: 1e-20
Query Start/End: Original strand, 375 - 494
Target Start/End: Original strand, 21367650 - 21367770
Alignment:
Q  375 attgtttttgtataataaataacttgttttcataagctatcctggagagcttatgaaaatgagtttaaaacagggtatgaac-atgtcatgaactgtttt 473  Q
    |||||||| |||||||  |||| |||||||||||||||||| |||||| ||||||||||| || | |||||||  | ||||| ||||||| | |||||||    
T  21367650 attgttttcgtataatgtataagttgttttcataagctatcttggagaacttatgaaaataagctgaaaacagcttgtgaacaatgtcataagctgtttt 21367749  T
Q  474 cataagttctctcaaacagtc 494  Q
    ||||||||||| |||||||||    
T  21367750 cataagttctcccaaacagtc 21367770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 318 - 484
Target Start/End: Original strand, 1816506 - 1816675
Alignment:
Q  318 ttatcatataagcgcttatggataagctattttt-ataacacaacataaaattaagtcat--tgtttttgtataataaataacttgttttcataagctat 414  Q
    |||||||||||| ||| ||| |||| |||||||| |||| | || ||||||| ||||||   ||||||||||||| | |||| |||||||||||||||||    
T  1816506 ttatcatataagagctaatgtataaactattttttataataaaagataaaataaagtcaaactgtttttgtataagatataagttgttttcataagctat 1816605  T
Q  415 cctggagagcttatgaaaatgagtttaaaacagggtatgaacatgtcatgaactgttttcataagttctc 484  Q
     ||||||||||||| ||||| || | |||||||  |||||| ||||||| |  | |||||||| ||||||    
T  1816606 actggagagcttatcaaaataagctgaaaacagcctatgaaaatgtcataagttattttcatatgttctc 1816675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 50; E-Value: 6e-19
Query Start/End: Original strand, 274 - 508
Target Start/End: Complemental strand, 30574100 - 30573868
Alignment:
Q  274 tttggataaataacttaatttgcaacttacatcataagaagtgcttatcat-ataagcgcttatggataagctatttttataacacaacataaaattaag 372  Q
    |||||||||| | | ||||||||| |||| |||||||| | |   |||||| ||||||||||||| ||||||||||| ||||| |  | ||||||| |||    
T  30574100 tttggataaacaccataatttgcagcttatatcataagcatt---tatcatgataagcgcttatgtataagctatttctataaaa--agataaaataaag 30574006  T
Q  373 tca--ttgtttttgtataataaataacttgttttcataagctatcctggagagcttatgaaaatgagtttaaaacagggtatgaacatgtcatgaactgt 470  Q
    | |  || ||||| ||||||  |||   ||||||||||||||||| ||||||||| ||||| || || | |||||||  |||||||||| ||| |  |||    
T  30574005 ttaagttttttttttataatctatatgatgttttcataagctatcttggagagctgatgaacataagctgaaaacagcttatgaacatgccataatttgt 30573906  T
Q  471 tttcataagttctctcaaacagtctaacaagtgcttat 508  Q
    |||||||||||||| ||||||  || ||||||||||||    
T  30573905 tttcataagttctcacaaacaaactcacaagtgcttat 30573868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 50; E-Value: 6e-19
Query Start/End: Original strand, 401 - 543
Target Start/End: Original strand, 45541580 - 45541724
Alignment:
Q  401 ttttcataagctatcctggagagcttatgaaaatgagtttaaaacagggtatgaacatgtcatgaactgttttcataagttctctcaaacagtctaacaa 500  Q
    ||||||||||||||| |||| | ||||||| ||| |  | |||||||  |||||||||||||| | |||||||||||||||||   ||||||||| ||||    
T  45541580 ttttcataagctatcttggataacttatgagaataacctgaaaacagcttatgaacatgtcataagctgttttcataagttcttctaaacagtcttacaa 45541679  T
Q  501 gtgcttatacaa--gaatagcctcaaataagtcaatccaaacagg 543  Q
    ||| |||||| |   ||||  ||||||||||||||||||||||||    
T  45541680 gtgtttataccattaaataagctcaaataagtcaatccaaacagg 45541724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 45; E-Value: 6e-16
Query Start/End: Original strand, 334 - 463
Target Start/End: Original strand, 24785145 - 24785276
Alignment:
Q  334 tatggataagctatttttataacacaacataaaattaagtcatt--gtttttgtataataaataacttgttttcataagctatcctggagagcttatgaa 431  Q
    |||| |||| |||||| || | ||||| ||||||| |||||| |  |||||||||||||  ||||| ||||||||||||||||||| ||||||||||| |    
T  24785145 tatgaataacctatttctaaatcacaagataaaataaagtcaatctgtttttgtataatctataacgtgttttcataagctatcctcgagagcttatgta 24785244  T
Q  432 aatgagtttaaaacagggtatgaacatgtcat 463  Q
    ||| || | ||||||   ||||||||||||||    
T  24785245 aataagctaaaaacaacttatgaacatgtcat 24785276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 393 - 504
Target Start/End: Complemental strand, 14548790 - 14548679
Alignment:
Q  393 ataacttgttttcataagctatcctggagagcttatgaaaatgagtttaaaacagggtatgaacatgtcatgaactgttttcataagttctctcaaacag 492  Q
    |||| ||||||||||||| ||| |||||||||||||| |||| || | |||||||  ||| || |||||||    |||||||||||| ||||||||||||    
T  14548790 ataagttgttttcataagttattctggagagcttatggaaataagctgaaaacagcctattaaaatgtcatacgttgttttcataagctctctcaaacag 14548691  T
Q  493 tctaacaagtgc 504  Q
    ||| ||||||||    
T  14548690 tctcacaagtgc 14548679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 42; E-Value: 0.00000000000004
Query Start/End: Original strand, 326 - 508
Target Start/End: Complemental strand, 20192744 - 20192560
Alignment:
Q  326 taagcgcttatggataagctatttttataacacaacataaaattaagtcatt--gtttttgtataataaataacttgttttcataagctatcctggagag 423  Q
    |||| ||||||| ||||||||||| ||||||| || ||||||| ||||||    |||||  ||||||  ||||  ||||||  |||  ||| | ||||||    
T  20192744 taagtgcttatgtataagctatttatataacaaaagataaaataaagtcaaacagttttcatataatctataagctgtttttgtaacttattcgggagag 20192645  T
Q  424 cttatgaaaatgagtttaaaacagggtatgaacatgtcatgaactgttttcataagttctctcaaacagtctaacaagtgcttat 508  Q
    |||||| ||||||||| |||||||  |||| ||||||||| | ||||||  ||||| ||||||| ||||| ||| ||||||||||    
T  20192644 cttatggaaatgagttgaaaacagcttatggacatgtcataagctgtttctataagctctctcatacagtgtaagaagtgcttat 20192560  T

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Target: chr3; HSP #9
Raw Score: 42; E-Value: 0.00000000000004
Query Start/End: Original strand, 399 - 508
Target Start/End: Original strand, 37273141 - 37273250
Alignment:
Q  399 tgttttcataagctatcctggagagcttatgaaaatgagtttaaaacagggtatgaacatgtcatgaactgttttcataagttctctcaaacagtctaac 498  Q
    ||||||||||||||||| |||||| |||||| |||| |||| ||||||   |||| ||||||||| |  ||||| |||||| |||| |||||||||| ||    
T  37273141 tgttttcataagctatcttggagaacttatggaaataagttgaaaacaacttatggacatgtcataagttgtttccataagctctcccaaacagtctcac 37273240  T
Q  499 aagtgcttat 508  Q
     |||||||||    
T  37273241 cagtgcttat 37273250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 42; E-Value: 0.00000000000004
Query Start/End: Original strand, 330 - 508
Target Start/End: Complemental strand, 49465797 - 49465619
Alignment:
Q  330 cgcttatggataagctatttttataacacaacataaaattaagtcattgttttt-gtataa-taaataacttgttttcataagctatcctggagagctta 427  Q
    ||||||||  |||||||||||||||||| || ||||||| |||| | | ||||| |||||  |||||   ||||||||||||||||| ||||||| ||||    
T  49465797 cgcttatgtgtaagctatttttataacaaaagataaaataaagttaatttttttcgtatagctaaatg--ttgttttcataagctatactggagaactta 49465700  T
Q  428 tgaaaatgagtttaaaacagggtatgaacatgtcatgaactgttttcataagttctctcaaacagtctaacaagtgcttat 508  Q
    || |||| || |||||| |    |||||||||| || | ||||||||||||||||||  ||||| | | ||||||||||||    
T  49465699 tggaaataagcttaaaaaacctaatgaacatgtaataagctgttttcataagttctccgaaacaatatcacaagtgcttat 49465619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 42; E-Value: 0.00000000000004
Query Start/End: Original strand, 406 - 495
Target Start/End: Original strand, 50952347 - 50952436
Alignment:
Q  406 ataagctatcctggagagcttatgaaaatgagtttaaaacagggtatgaacatgtcatgaactgttttcataagttctctcaaacagtct 495  Q
    |||| ||||| ||||||||||||| |||| || |||||||||  |||||||||||||| | |||||||| || |||||||| ||||||||    
T  50952347 ataaactatcttggagagcttatggaaataagcttaaaacagtttatgaacatgtcataagctgttttcgtacgttctctcgaacagtct 50952436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 42; E-Value: 0.00000000000004
Query Start/End: Original strand, 374 - 495
Target Start/End: Complemental strand, 54837122 - 54837001
Alignment:
Q  374 cattgtttttgtataataaataacttgttttcataagctatcctggagagcttatgaaaatgagtttaaaacagggtatgaacatgtcatgaactgtttt 473  Q
    ||||||||||||||||    ||| || ||||||||||||||| |||| ||||||| ||||| ||   |||||| | |||||||||||||| | |||||||    
T  54837122 cattgtttttgtataaactgtaagttattttcataagctatcttggacagcttataaaaataagcggaaaacaagttatgaacatgtcataagctgtttt 54837023  T
Q  474 cataagttctctcaaacagtct 495  Q
    ||||| ||||  ||||||||||    
T  54837022 cataaattcttccaaacagtct 54837001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 393 - 500
Target Start/End: Complemental strand, 18405900 - 18405792
Alignment:
Q  393 ataacttgttttcataagctatcctggagagcttatgaaaatgagtttaaaacagggtatgaaca-tgtcatgaactgttttcataagttctctcaaaca 491  Q
    |||| |||||||||||||||||| |||||| ||||||||| | || || ||| ||  |||||| | |||| |||||||||||||||||||||  ||||||    
T  18405900 ataagttgttttcataagctatcttggagaacttatgaaattaagcttgaaaaagattatgaaaagtgtcgtgaactgttttcataagttcttgcaaaca 18405801  T
Q  492 gtctaacaa 500  Q
    |||| ||||    
T  18405800 gtctcacaa 18405792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 393 - 463
Target Start/End: Complemental strand, 3044328 - 3044258
Alignment:
Q  393 ataacttgttttcataagctatcctggagagcttatgaaaatgagtttaaaacagggtatgaacatgtcat 463  Q
    ||||| ||||||| || |||| |||||||||||||||||||| |||| |||||||  ||||||||||||||    
T  3044328 ataacctgttttcttatgctaacctggagagcttatgaaaataagttgaaaacagcttatgaacatgtcat 3044258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 409 - 540
Target Start/End: Original strand, 24281064 - 24281197
Alignment:
Q  409 agctatcctggagagcttatgaaaatgagtttaaaacagggtatgaacatgtcatgaactgttttcataagttctctcaaacagtctaacaagtgcttat 508  Q
    ||||||| |||||||||||||||| | |||| ||||||   |||| | || |||| |  |||||||||||| ||||||||||| ||  ||||||||||||    
T  24281064 agctatcatggagagcttatgaaagtaagttgaaaacaacttatggagatatcataagttgttttcataagctctctcaaacaatcacacaagtgcttat 24281163  T
Q  509 acaag--aatagcctcaaataagtcaatccaaac 540  Q
    || ||   |||| |||||||||||||||| ||||    
T  24281164 accagtagatagactcaaataagtcaatctaaac 24281197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 399 - 479
Target Start/End: Complemental strand, 39602273 - 39602193
Alignment:
Q  399 tgttttcataagctatcctggagagcttatgaaaatgagtttaaaacagggtatgaacatgtcatgaactgttttcataag 479  Q
    ||||||||||||||||| | |||| ||||||||||| |||| ||||||   |||||||||||||| | |||| ||||||||    
T  39602273 tgttttcataagctatctttgagaacttatgaaaataagttgaaaacaatttatgaacatgtcataagctgtcttcataag 39602193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 393 - 500
Target Start/End: Original strand, 39980730 - 39980838
Alignment:
Q  393 ataacttgttttcataagctatcctggagagcttatgaaaatgagtttaaaacagggtatgaa-catgtcatgaactgttttcataagttctctcaaaca 491  Q
    |||| ||||||| |||||||||  |||||| ||||||||||| |||| |||| ||  |||||| |  ||||| | ||||||||||||||||||| |||||    
T  39980730 ataagttgtttttataagctatattggagaacttatgaaaataagttgaaaaaagcttatgaaaccagtcataagctgttttcataagttctcttaaaca 39980829  T
Q  492 gtctaacaa 500  Q
    |||| ||||    
T  39980830 gtctcacaa 39980838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 450 - 543
Target Start/End: Complemental strand, 44014810 - 44014715
Alignment:
Q  450 tatgaacatgtcatgaactgttttcataagttctctcaaacagtctaacaagtgcttatacaag--aatagcctcaaataagtcaatccaaacagg 543  Q
    |||||||| ||||| | ||||||||||||||| ||||||||||||| ||||||| |||| | ||   |||  |||||||||| |||||||||||||    
T  44014810 tatgaacaggtcataagctgttttcataagttttctcaaacagtctcacaagtgtttatgctagtagataaactcaaataagccaatccaaacagg 44014715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 468 - 508
Target Start/End: Original strand, 50211811 - 50211851
Alignment:
Q  468 tgttttcataagttctctcaaacagtctaacaagtgcttat 508  Q
    |||||||||||||||||||||||||||| ||||||||||||    
T  50211811 tgttttcataagttctctcaaacagtcttacaagtgcttat 50211851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 452 - 515
Target Start/End: Complemental strand, 20195043 - 20194980
Alignment:
Q  452 tgaacatgtcatgaactgttttcataagttctctcaaacagtctaacaagtgcttatacaagaa 515  Q
    |||| ||||||| ||||||||||||||| |||| |||||||||| |||| ||||||| ||||||    
T  20195043 tgaatatgtcataaactgttttcataagctctcacaaacagtctcacaactgcttatgcaagaa 20194980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 379 - 434
Target Start/End: Original strand, 22203417 - 22203472
Alignment:
Q  379 tttttgtataataaataacttgttttcataagctatcctggagagcttatgaaaat 434  Q
    ||||||||||||  |||| |||||||||||||||||| |||||| |||||||||||    
T  22203417 tttttgtataatctataagttgttttcataagctatcttggagaacttatgaaaat 22203472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 402 - 501
Target Start/End: Complemental strand, 27896230 - 27896131
Alignment:
Q  402 tttcataagctatcctggagagcttatgaaaatgagtttaaaacagggtatgaacatgtcatgaactgttttcataagttctctcaaacagtctaacaag 501  Q
    |||||||||||||| ||||||| || ||||||| || | |  |||   ||||||| |||||||| |||||||||||| |||||  |||||||||||||||    
T  27896230 tttcataagctatcttggagagtttttgaaaataagctgacgacaatttatgaacttgtcatgagctgttttcataaattctcctaaacagtctaacaag 27896131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.0000000005
Query Start/End: Original strand, 402 - 512
Target Start/End: Complemental strand, 2152238 - 2152128
Alignment:
Q  402 tttcataagctatcctggagagcttatgaaaatgagtttaaaacagggtatgaacatgtcatgaactgttttcataagttctctcaaacagtctaacaag 501  Q
    |||||||| ||||||| ||||||||||  |||  |||| |||||||  || ||||||||||| |  |||||||||||  | ||||||  ||||| |||||    
T  2152238 tttcataaactatccttgagagcttatagaaacaagttgaaaacagcttacgaacatgtcataagttgttttcataaaatatctcaattagtctcacaag 2152139  T
Q  502 tgcttatacaa 512  Q
    |||||||||||    
T  2152138 tgcttatacaa 2152128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.0000000005
Query Start/End: Original strand, 401 - 495
Target Start/End: Original strand, 21574499 - 21574593
Alignment:
Q  401 ttttcataagctatcctggagagcttatgaaaatgagtttaaaacagggtatgaacatgtcatgaactgttttcataagttctctcaaacagtct 495  Q
    |||| |||||||| | ||||||||||||| |||| || | ||| |||  |||||||||||||| |  |||||||||||| |||| ||||||||||    
T  21574499 tttttataagctaacatggagagcttatggaaataagctaaaagcagcttatgaacatgtcataagttgttttcataagctctcccaaacagtct 21574593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.0000000005
Query Start/End: Original strand, 399 - 505
Target Start/End: Original strand, 24624217 - 24624323
Alignment:
Q  399 tgttttcataagctatcctggagagcttatgaaaatgagtttaaaacagggtatgaacatgtcatgaactgttttcataagttctctcaaacagtctaac 498  Q
    |||||||||| |||||||| || | ||||||  ||| || | |||||||  |||| ||||||||| | ||||||||||||| |||  |||||||||| ||    
T  24624217 tgttttcataggctatcctagaaatcttatgttaataagctgaaaacagtttatggacatgtcataagctgttttcataagctcttccaaacagtcttac 24624316  T
Q  499 aagtgct 505  Q
    |||||||    
T  24624317 aagtgct 24624323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 35; E-Value: 0.0000000005
Query Start/End: Original strand, 393 - 495
Target Start/End: Complemental strand, 40881017 - 40880915
Alignment:
Q  393 ataacttgttttcataagctatcctggagagcttatgaaaatgagtttaaaacagggtatgaacatgtcatgaactgttttcataagttctctcaaacag 492  Q
    |||| |||||||||||| ||||||| ||||  |||| ||||| |||||||||||   || |  |||||||| |  |||||||||||| ||||||||||||    
T  40881017 ataaattgttttcataaactatcctagagaagttataaaaataagtttaaaacaacttacggtcatgtcataagttgttttcataagctctctcaaacag 40880918  T
Q  493 tct 495  Q
    |||    
T  40880917 tct 40880915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 35; E-Value: 0.0000000005
Query Start/End: Original strand, 409 - 503
Target Start/End: Original strand, 47513670 - 47513764
Alignment:
Q  409 agctatcctggagagcttatgaaaatgagtttaaaacagggtatgaacatgtcatgaactgttttcataagttctctcaaacagtctaacaagtg 503  Q
    ||||||| |||||||||||||||||| | || ||||||   ||||||| |||||| |  ||||||||||||| ||| | |||||||| |||||||    
T  47513670 agctatcttggagagcttatgaaaataaattgaaaacaacttatgaacgtgtcataacttgttttcataagtcctcccgaacagtctcacaagtg 47513764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 424 - 481
Target Start/End: Original strand, 5391911 - 5391968
Alignment:
Q  424 cttatgaaaatgagtttaaaacagggtatgaacatgtcatgaactgttttcataagtt 481  Q
    ||||||||||| |||| |||||||  |||||||||||||| | |||||||||||||||    
T  5391911 cttatgaaaataagttgaaaacagcttatgaacatgtcataagctgttttcataagtt 5391968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 414 - 463
Target Start/End: Original strand, 25925764 - 25925813
Alignment:
Q  414 tcctggagagcttatgaaaatgagtttaaaacagggtatgaacatgtcat 463  Q
    ||||||||||||||||||||| |||| |||||||  ||||||||||||||    
T  25925764 tcctggagagcttatgaaaataagttgaaaacagcttatgaacatgtcat 25925813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 319 - 375
Target Start/End: Complemental strand, 905115 - 905059
Alignment:
Q  319 tatcatataagcgcttatggataagctatttttataacacaacataaaattaagtca 375  Q
    ||||||||||||||||| | ||||||||||| ||||||| || ||||||| ||||||    
T  905115 tatcatataagcgcttaagtataagctatttctataacaaaagataaaataaagtca 905059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 399 - 491
Target Start/End: Complemental strand, 20467249 - 20467157
Alignment:
Q  399 tgttttcataagctatcctggagagcttatgaaaatgagtttaaaacagggtatgaacatgtcatgaactgttttcataagttctctcaaaca 491  Q
    |||||||||||| |||||| | |||||| | ||||| ||   |||||||  |||||||||||||| |||||||| ||| || |||||||||||    
T  20467249 tgttttcataagatatcctagcgagcttgtcaaaattagccgaaaacagcatatgaacatgtcataaactgtttccattagctctctcaaaca 20467157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 399 - 463
Target Start/End: Original strand, 20669179 - 20669243
Alignment:
Q  399 tgttttcataagctatcctggagagcttatgaaaatgagtttaaaacagggtatgaacatgtcat 463  Q
    ||||||||||||||||| ||||||||||||| |||| ||   |||||||  ||||||||||||||    
T  20669179 tgttttcataagctatcttggagagcttatgtaaataagcggaaaacagcttatgaacatgtcat 20669243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 399 - 439
Target Start/End: Complemental strand, 24158566 - 24158526
Alignment:
Q  399 tgttttcataagctatcctggagagcttatgaaaatgagtt 439  Q
    ||||||||||||||||||||||||||||||| |||| ||||    
T  24158566 tgttttcataagctatcctggagagcttatggaaataagtt 24158526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 312 - 368
Target Start/End: Original strand, 25964360 - 25964416
Alignment:
Q  312 aagtgcttatcatataagcgcttatggataagctatttttataacacaacataaaat 368  Q
    ||||||||||||||||||  ||| || ||||||||||||||||||| || |||||||    
T  25964360 aagtgcttatcatataagttcttttgtataagctatttttataacaaaagataaaat 25964416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 339 - 504
Target Start/End: Complemental strand, 36646507 - 36646340
Alignment:
Q  339 ataagctatttttataacacaacataaaattaagtc--attgtttttgtataataaataacttgttttcataagctatcctggagagcttatgaaaatga 436  Q
    ||||||||||| ||| ||| || ||||||| ||||   ||||||||  |||||   ||||||||||||||||||||||||| ||||| ||||  |||| |    
T  36646507 ataagctatttctatgacaaaagataaaataaagtataattgttttcatataagttataacttgttttcataagctatcctagagagtttatagaaataa 36646408  T
Q  437 gtttaaaacagggtatgaacatgtcatgaactgttttcataagttctctcaaacagtctaacaagtgc 504  Q
    | | |||||||  |||| ||||| ||| |   |||| |||||| |||| |||| ||||| ||||||||    
T  36646407 gatgaaaacagcttatggacatgccataagtggtttccataagctctcccaaatagtcttacaagtgc 36646340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 399 - 463
Target Start/End: Original strand, 40665436 - 40665500
Alignment:
Q  399 tgttttcataagctatcctggagagcttatgaaaatgagtttaaaacagggtatgaacatgtcat 463  Q
    |||||||||||| |||| |||||||||||| ||||| || | |||||||  ||||||||||||||    
T  40665436 tgttttcataagttatcttggagagcttataaaaataagctgaaaacagcttatgaacatgtcat 40665500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 315 - 375
Target Start/End: Complemental strand, 41029000 - 41028940
Alignment:
Q  315 tgcttatcatataagcgcttatggataagctatttttataacacaacataaaattaagtca 375  Q
    ||||||||||||||| ||||||| ||||||||||| ||||||| || | ||||| ||||||    
T  41029000 tgcttatcatataagtgcttatgtataagctatttctataacaaaagaaaaaataaagtca 41028940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 401 - 444
Target Start/End: Original strand, 2825156 - 2825199
Alignment:
Q  401 ttttcataagctatcctggagagcttatgaaaatgagtttaaaa 444  Q
    ||||||||||||||| |||||||||||||||||| || ||||||    
T  2825156 ttttcataagctatcttggagagcttatgaaaataagcttaaaa 2825199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 318 - 357
Target Start/End: Complemental strand, 16790502 - 16790463
Alignment:
Q  318 ttatcatataagcgcttatggataagctatttttataaca 357  Q
    |||||||||||| ||||||| |||||||||||||||||||    
T  16790502 ttatcatataagtgcttatgtataagctatttttataaca 16790463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 320 - 375
Target Start/End: Original strand, 34958254 - 34958309
Alignment:
Q  320 atcatataagcgcttatggataagctatttttataacacaacataaaattaagtca 375  Q
    ||||||||||| |||||| |||| |||||| |||||||||| ||||||| ||||||    
T  34958254 atcatataagcacttatgaataaactatttctataacacaagataaaataaagtca 34958309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 457 - 508
Target Start/End: Original strand, 50760656 - 50760707
Alignment:
Q  457 atgtcatgaactgttttcataagttctctcaaacagtctaacaagtgcttat 508  Q
    ||||||||||| |||||||||||||||||||| | || | ||||||||||||    
T  50760656 atgtcatgaacagttttcataagttctctcaagcggtgtcacaagtgcttat 50760707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 399 - 429
Target Start/End: Complemental strand, 24887346 - 24887316
Alignment:
Q  399 tgttttcataagctatcctggagagcttatg 429  Q
    |||||||||||||||||||||||||||||||    
T  24887346 tgttttcataagctatcctggagagcttatg 24887316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 468 - 542
Target Start/End: Complemental strand, 25182981 - 25182908
Alignment:
Q  468 tgttttcataagttctctcaaacagtctaacaagtgcttatacaagaatagcctcaaataagtcaatccaaacag 542  Q
    |||||||||||| ||||||||||||||| |||||| ||||||  ||  ||  ||||||||||||| |||||||||    
T  25182981 tgttttcataagctctctcaaacagtctcacaagttcttatagtag-gtaagctcaaataagtcactccaaacag 25182908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 450 - 508
Target Start/End: Original strand, 25258830 - 25258888
Alignment:
Q  450 tatgaacatgtcatgaactgttttcataagttctctcaaacagtctaacaagtgcttat 508  Q
    |||| ||||||||| |||| ||||||||||||| |||||| ||||| |||||| |||||    
T  25258830 tatgcacatgtcataaactcttttcataagttcactcaaaaagtctcacaagtacttat 25258888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 419 - 493
Target Start/End: Complemental strand, 33880599 - 33880526
Alignment:
Q  419 gagagcttatgaaaatgagtttaaaacagggtatgaacatgtcatgaactgttttcataagttctctcaaacagt 493  Q
    ||||||||| | |||| || |||||||||  |||| |||| |||||| |||||||||||||||||| ||||||||    
T  33880599 gagagcttaggcaaataagattaaaacagcttatggacat-tcatgatctgttttcataagttctcccaaacagt 33880526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 467 - 542
Target Start/End: Complemental strand, 47904075 - 47903998
Alignment:
Q  467 ctgttttcataagttctctcaaacagtctaacaagtgcttatacaaga--atagcctcaaataagtcaatccaaacag 542  Q
    |||||||||||||||||| |||||||| | ||| | |||||||  |||  |||  |||||||||||||||||||||||    
T  47904075 ctgttttcataagttctcccaaacagtgtcacaggagcttatatcagaggataaactcaaataagtcaatccaaacag 47903998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 470 - 508
Target Start/End: Original strand, 50015964 - 50016002
Alignment:
Q  470 ttttcataagttctctcaaacagtctaacaagtgcttat 508  Q
    |||||||||||||||||||||||||| ||||||| ||||    
T  50015964 ttttcataagttctctcaaacagtctcacaagtgtttat 50016002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 419 - 493
Target Start/End: Original strand, 53952075 - 53952149
Alignment:
Q  419 gagagcttatgaaaatgagtttaaaacagggtatgaacatgtcatgaactgttttcataagttctctcaaacagt 493  Q
    ||||| |||||||||| || | |||||||   |||||||||| || | ||||||||||||||||||| |||||||    
T  53952075 gagagtttatgaaaataagctgaaaacagctcatgaacatgttatcagctgttttcataagttctcttaaacagt 53952149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 455 - 508
Target Start/End: Complemental strand, 2413686 - 2413633
Alignment:
Q  455 acatgtcatgaactgttttcataagttctctcaaacagtctaacaagtgcttat 508  Q
    ||||||||||| | ||||||||||| |||||||||||| || ||||||| ||||    
T  2413686 acatgtcatgagccgttttcataagctctctcaaacagacttacaagtgattat 2413633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 399 - 500
Target Start/End: Complemental strand, 3845625 - 3845524
Alignment:
Q  399 tgttttcataagctatcctggagagcttatgaaaatgagtttaaaacagggtatgaacatgtcatgaactgttttcataagttctctcaaacagtctaac 498  Q
    |||||||||||| |||| |||||| ||||||||||| || | |||| ||  ||| || ||||||| | |||| |||| | ||||| ||||||||||| ||    
T  3845625 tgttttcataagttatcttggagaacttatgaaaataagctgaaaaaagattataaaaatgtcataatctgtcttcagatgttctatcaaacagtctcac 3845526  T
Q  499 aa 500  Q
    ||    
T  3845525 aa 3845524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 520 - 553
Target Start/End: Complemental strand, 16072981 - 16072948
Alignment:
Q  520 ctcaaataagtcaatccaaacaggtcgtaagtgt 553  Q
    |||||||||||||||||||||||||| |||||||    
T  16072981 ctcaaataagtcaatccaaacaggtcctaagtgt 16072948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 406 - 495
Target Start/End: Complemental strand, 23808120 - 23808031
Alignment:
Q  406 ataagctatcctggagagcttatgaaaatgagtttaaaacagggtatgaacatgtcatgaactgttttcataagttctctcaaacagtct 495  Q
    |||||||||| ||||||| |||||||||| || | ||||||   | |||||||||||| | ||| ||||||||||| || ||||| ||||    
T  23808120 ataagctatcttggagagtttatgaaaataagatgaaaacaatttgtgaacatgtcataagctgctttcataagttttcccaaaccgtct 23808031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 399 - 444
Target Start/End: Original strand, 24280718 - 24280763
Alignment:
Q  399 tgttttcataagctatcctggagagcttatgaaaatgagtttaaaa 444  Q
    |||| |||||||||||| |||||||||||||||||| |||| ||||    
T  24280718 tgttgtcataagctatcatggagagcttatgaaaataagttgaaaa 24280763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 399 - 428
Target Start/End: Complemental strand, 44284143 - 44284114
Alignment:
Q  399 tgttttcataagctatcctggagagcttat 428  Q
    ||||||||||||||||||||||||||||||    
T  44284143 tgttttcataagctatcctggagagcttat 44284114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 399 - 496
Target Start/End: Complemental strand, 50600241 - 50600144
Alignment:
Q  399 tgttttcataagctatcctggagagcttatgaaaatgagtttaaaacagggtatgaacatgtcatgaactgttttcataagttctctcaaacagtcta 496  Q
    ||||||||| ||||||  |||||| ||||||||||| || | |||||||    || |||||||||||  |||||| |||||||||  |||||||||||    
T  50600241 tgttttcatcagctatattggagaacttatgaaaataagctgaaaacagctcgtggacatgtcatgagttgtttttataagttcttccaaacagtcta 50600144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 398 - 508
Target Start/End: Complemental strand, 52323960 - 52323848
Alignment:
Q  398 ttgttttcataagctatcctggagagctta--tgaaaatgagtttaaaacagggtatgaacatgtcatgaactgttttcataagttctctcaaacagtct 495  Q
    ||||||| |||||||||| |||||||||||  || |||| |||| |||||||  |||| || |||||| || | |||  ||||| |||| ||||||||||    
T  52323960 ttgttttgataagctatcttggagagcttatgtggaaataagttgaaaacagcttatggacgtgtcataaattatttcaataagctctcacaaacagtct 52323861  T
Q  496 aacaagtgcttat 508  Q
      |||||||||||    
T  52323860 tgcaagtgcttat 52323848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 57; Significance: 4e-23; HSPs: 51)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 57; E-Value: 4e-23
Query Start/End: Original strand, 324 - 493
Target Start/End: Complemental strand, 42215446 - 42215275
Alignment:
Q  324 tataagcgcttatggataagctatttttataacacaacataaaattaagtcat--tgtttttgtataataaataacttgttttcataagctatcctggag 421  Q
    |||| |||||||||||| | |||||| || ||||  | ||||||| ||||||   ||||||||||||||  ||||| | |||||||| ||||||||||||    
T  42215446 tatatgcgcttatggatgaactatttctacaacatgagataaaataaagtcaaactgtttttgtataatctataacctattttcatatgctatcctggag 42215347  T
Q  422 agcttatgaaaatgagtttaaaacagggtatgaacatgtcatgaactgttttcataagttctctcaaacagt 493  Q
    |||||||| |||| || | |||||||  |||||||| ||||| | |||||||||| ||||||| ||||||||    
T  42215346 agcttatgtaaataagctgaaaacagcttatgaacaagtcataagctgttttcattagttctcccaaacagt 42215275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 45; E-Value: 6e-16
Query Start/End: Original strand, 393 - 509
Target Start/End: Complemental strand, 39551278 - 39551162
Alignment:
Q  393 ataacttgttttcataagctatcctggagagcttatgaaaatgagtttaaaacagggtatgaacatgtcatgaactgttttcataagttctctcaaacag 492  Q
    |||| ||||||||||||||| ||||||||||||||| ||||| |||| |||||||  | || ||||||||| |  ||||| ||||| ||||| |||||||    
T  39551278 ataagttgttttcataagctttcctggagagcttataaaaataagttaaaaacagcttttggacatgtcataagttgtttccataaattctcccaaacag 39551179  T
Q  493 tctaacaagtgcttata 509  Q
    | | |||| ||||||||    
T  39551178 tttcacaaatgcttata 39551162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 43; E-Value: 0.000000000000009
Query Start/End: Original strand, 398 - 496
Target Start/End: Original strand, 12851182 - 12851280
Alignment:
Q  398 ttgttttcataagctatcctggagagcttatgaaaatgagtttaaaacagggtatgaacatgtcatgaactgttttcataagttctctcaaacagtcta 496  Q
    ||||||||||||||| |||| |||||||||||||||| ||   ||||||   ||||||||||| || | ||||||||||||||| || |||||||||||    
T  12851182 ttgttttcataagctttccttgagagcttatgaaaataagccgaaaacatcttatgaacatgttataagctgttttcataagttttcccaaacagtcta 12851280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 42; E-Value: 0.00000000000004
Query Start/End: Original strand, 399 - 508
Target Start/End: Complemental strand, 11569520 - 11569411
Alignment:
Q  399 tgttttcataagctatcctggagagcttatgaaaatgagtttaaaacagggtatgaacatgtcatgaactgttttcataagttctctcaaacagtctaac 498  Q
    ||||||||||||||||| ||||||| || ||||||| || | ||||||   |||| ||||||||| | |||||| |||||| ||||| ||||||||| ||    
T  11569520 tgttttcataagctatcatggagagattttgaaaataagctgaaaacaacttatgtacatgtcataagctgtttccataagctctcttaaacagtctcac 11569421  T
Q  499 aagtgcttat 508  Q
    ||||| ||||    
T  11569420 aagtggttat 11569411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 399 - 463
Target Start/End: Original strand, 20672757 - 20672821
Alignment:
Q  399 tgttttcataagctatcctggagagcttatgaaaatgagtttaaaacagggtatgaacatgtcat 463  Q
    |||||| ||||||||||||||||||||||||||||| || | |||||||  ||||||||||||||    
T  20672757 tgtttttataagctatcctggagagcttatgaaaataagctgaaaacagcttatgaacatgtcat 20672821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 398 - 484
Target Start/End: Complemental strand, 26473816 - 26473730
Alignment:
Q  398 ttgttttcataagctatcctggagagcttatgaaaatgagtttaaaacagggtatgaacatgtcatgaactgttttcataagttctc 484  Q
    |||||||||||||||||||| |||||||||||||||| |||| |||  ||  |||  ||||||||| | ||||||||||||| ||||    
T  26473816 ttgttttcataagctatcctagagagcttatgaaaataagttaaaactagcttatagacatgtcataagctgttttcataagctctc 26473730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 399 - 493
Target Start/End: Original strand, 30389106 - 30389200
Alignment:
Q  399 tgttttcataagctatcctggagagcttatgaaaatgagtttaaaacagggtatgaacatgtcatgaactgttttcataagttctctcaaacagt 493  Q
    |||||||||||||| |||| |||| ||||||||||| || | ||||||   |||||||||||||| | || |||||||| | |||||||||||||    
T  30389106 tgttttcataagctttcctagagaacttatgaaaataagctgaaaacaacttatgaacatgtcattagctattttcatatgctctctcaaacagt 30389200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 38; E-Value: 0.000000000009
Query Start/End: Original strand, 398 - 495
Target Start/End: Complemental strand, 7918510 - 7918413
Alignment:
Q  398 ttgttttcataagctatcctggagagcttatgaaaatgagtttaaaacagggtatgaacatgtcatgaactgttttcataagttctctcaaacagtct 495  Q
    |||||||| ||||||||| ||||||||||||  |||| ||||  ||||||  |||||||||||| | |  |||||||||||| |||| ||||||||||    
T  7918510 ttgttttcgtaagctatcttggagagcttattgaaataagttggaaacagcttatgaacatgtcttaagttgttttcataagctctcccaaacagtct 7918413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 325 - 412
Target Start/End: Original strand, 926418 - 926508
Alignment:
Q  325 ataagcgcttatggataagctatttttataacacaacataaaattaagtc---attgtttttgtataataaataacttgttttcataagct 412  Q
    |||||||| |||| ||||||||||| |||||||||| ||||||| |||||   | ||||||||||| ||  |||| |||||||||||||||    
T  926418 ataagcgcatatgaataagctatttctataacacaagataaaataaagtcaaaactgtttttgtattatctataagttgttttcataagct 926508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 400 - 444
Target Start/End: Original strand, 1433556 - 1433600
Alignment:
Q  400 gttttcataagctatcctggagagcttatgaaaatgagtttaaaa 444  Q
    ||||||||||||||||||||||||||||||||||| |||| ||||    
T  1433556 gttttcataagctatcctggagagcttatgaaaataagttgaaaa 1433600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 393 - 496
Target Start/End: Complemental strand, 9956883 - 9956779
Alignment:
Q  393 ataacttgttttcataagctatcctggagagcttatgaaaatgagtttaaaacagggtatgaac-atgtcatgaactgttttcataagttctctcaaaca 491  Q
    |||| |||||||||||| ||||| |||||| ||||||||||| || | |||||    ||||||| ||| ||| |||| |||||||||||||||||||||     
T  9956883 ataagttgttttcataatctatcttggagaacttatgaaaataagctgaaaactacttatgaacaatgccataaactattttcataagttctctcaaacg 9956784  T
Q  492 gtcta 496  Q
    |||||    
T  9956783 gtcta 9956779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 450 - 543
Target Start/End: Original strand, 16162818 - 16162913
Alignment:
Q  450 tatgaacatgtcatgaactgttttcataagttctctcaaacagtctaacaagtgcttatacaag--aatagcctcaaataagtcaatccaaacagg 543  Q
    |||||||| ||||| | ||||||||||||||| ||||||||||||| ||||||| |||| | ||   |||  |||||||||| |||||||||||||    
T  16162818 tatgaacaggtcataagctgttttcataagttttctcaaacagtctcacaagtgtttatgctagtagataaactcaaataagccaatccaaacagg 16162913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 399 - 489
Target Start/End: Original strand, 1930042 - 1930133
Alignment:
Q  399 tgttttcataagctatcctggagagcttatgaaaatgagtttaaaacagggtatgaac-atgtcatgaactgttttcataagttctctcaaa 489  Q
    ||||||||||||||||| ||| || ||| ||||||| || | |||||||  ||||||| ||||||| ||||||||||| |||||||| ||||    
T  1930042 tgttttcataagctatcttggtgaccttgtgaaaataagctgaaaacagcttatgaacaatgtcataaactgttttcacaagttctcccaaa 1930133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 274 - 359
Target Start/End: Original strand, 4389826 - 4389908
Alignment:
Q  274 tttggataaataacttaatttgcaacttacatcataagaagtgcttatcatataagcgcttatggataagctatttttataacaca 359  Q
    ||||||||||||||||| |||||| |||| | ||   |||||||||||||||| ||| | |||| ||||||||||| |||||||||    
T  4389826 tttggataaataacttattttgcagcttatagca---gaagtgcttatcatatgagcacatatgaataagctatttctataacaca 4389908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 393 - 484
Target Start/End: Original strand, 5088853 - 5088944
Alignment:
Q  393 ataacttgttttcataagctatcctggagagcttatgaaaatgagtttaaaacagggtatgaacatgtcatgaactgttttcataagttctc 484  Q
    |||| ||||||||| |||| ||||||||||||||||  |||| |||| |||||||  |||| |||||| || |||||||| |||||| ||||    
T  5088853 ataagttgttttcacaagcgatcctggagagcttattgaaataagttgaaaacagcttatggacatgttataaactgtttccataagctctc 5088944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 419 - 543
Target Start/End: Original strand, 9700028 - 9700154
Alignment:
Q  419 gagagcttatgaaaatgagtttaaaacagggtatgaacatgtcatgaactgttttcataagttctctcaaacagtctaacaagtgcttatacaag--aat 516  Q
    |||||||||||||||| || | |||||||  |||| ||||||||| || || ||||| ||| ||||||||| ||||| ||||||| |||| | ||   ||    
T  9700028 gagagcttatgaaaataaggtgaaaacagcttatggacatgtcataaattgatttcacaagctctctcaaatagtctcacaagtgtttatgctagtagat 9700127  T
Q  517 agcctcaaataagtcaatccaaacagg 543  Q
    |  ||||||||||| ||||||||||||    
T  9700128 aagctcaaataagttaatccaaacagg 9700154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 401 - 508
Target Start/End: Complemental strand, 30191202 - 30191095
Alignment:
Q  401 ttttcataagctatcctggagagcttatgaaaatgagtttaaaacagggtatgaacatgtcatgaactgttttcataagttctctcaaacagtctaacaa 500  Q
    |||| ||||||||||||| |  | ||||| |||| || | |||||| | | |||||||||||| |  ||||| |||||| |||| |||||||||||||||    
T  30191202 ttttgataagctatcctgaaatgtttatggaaataagctgaaaacaagttttgaacatgtcataagttgtttccataagctctcccaaacagtctaacaa 30191103  T
Q  501 gtgcttat 508  Q
    ||||||||    
T  30191102 gtgcttat 30191095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 399 - 478
Target Start/End: Complemental strand, 35220786 - 35220707
Alignment:
Q  399 tgttttcataagctatcctggagagcttatgaaaatgagtttaaaacagggtatgaacatgtcatgaactgttttcataa 478  Q
    |||||||||||||||| ||||||||||||| ||||| || | |||| ||  ||||  |||||||| ||||||||||||||    
T  35220786 tgttttcataagctattctggagagcttataaaaataagctaaaaatagcttatgggcatgtcataaactgttttcataa 35220707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 35; E-Value: 0.0000000005
Query Start/End: Original strand, 398 - 484
Target Start/End: Complemental strand, 2458630 - 2458544
Alignment:
Q  398 ttgttttcataagctatcctggagagcttatgaaaatgagtttaaaacagggtatgaacatgtcatgaactgttttcataagttctc 484  Q
    |||||| ||||||||||||| ||||||||||| |||| |  | |||||||  |||||||||| ||| | |||| |||||||||||||    
T  2458630 ttgtttacataagctatcctagagagcttatggaaataaactgaaaacagcttatgaacatgccataagctgtcttcataagttctc 2458544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 35; E-Value: 0.0000000005
Query Start/End: Original strand, 417 - 494
Target Start/End: Original strand, 10120781 - 10120859
Alignment:
Q  417 tggagagcttatgaaaatgagtttaaaacagggtatga-acatgtcatgaactgttttcataagttctctcaaacagtc 494  Q
    |||||| ||||||||||| || | |||||||  ||||| | ||||||| | ||||||||||||||||||||||||||||    
T  10120781 tggagaacttatgaaaataagctgaaaacagcatatgataaatgtcataagctgttttcataagttctctcaaacagtc 10120859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 35; E-Value: 0.0000000005
Query Start/End: Original strand, 313 - 375
Target Start/End: Original strand, 14482121 - 14482183
Alignment:
Q  313 agtgcttatcatataagcgcttatggataagctatttttataacacaacataaaattaagtca 375  Q
    ||||||||||||||||| ||||||| |||| |||||| ||||||| || ||||||| ||||||    
T  14482121 agtgcttatcatataagtgcttatgtataaactatttctataacaaaagataaaataaagtca 14482183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.0000000005
Query Start/End: Original strand, 399 - 433
Target Start/End: Original strand, 25097393 - 25097427
Alignment:
Q  399 tgttttcataagctatcctggagagcttatgaaaa 433  Q
    |||||||||||||||||||||||||||||||||||    
T  25097393 tgttttcataagctatcctggagagcttatgaaaa 25097427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 35; E-Value: 0.0000000005
Query Start/End: Original strand, 441 - 495
Target Start/End: Complemental strand, 41442474 - 41442420
Alignment:
Q  441 aaaacagggtatgaacatgtcatgaactgttttcataagttctctcaaacagtct 495  Q
    |||||||  |||||||||||||| || |||||||||||||||| |||||||||||    
T  41442474 aaaacagcatatgaacatgtcataaattgttttcataagttctgtcaaacagtct 41442420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 312 - 543
Target Start/End: Complemental strand, 28769491 - 28769256
Alignment:
Q  312 aagtgcttatcatataagcgcttatggataagctatttttataacacaacataaaattaagtc--attgtttttgtataataaataacttgttttcataa 409  Q
    |||||||||||||||||  ||||||| ||||||||||  ||||||| |  |||||||||||||  | | ||||  |||||   ||||  |||||||||||    
T  28769491 aagtgcttatcatataaatgcttatgtataagctattcctataacaaactataaaattaagtcaaactattttcttataagctataagctgttttcataa 28769392  T
Q  410 gctatcctggagagcttatgaaaatgagtttaaaacagggtatgaacatgtcatgaactgttttcataagttctctcaaacagtctaacaagtgcttata 509  Q
    |||||  ||||||| ||||| |||| || | ||||||   |||| |||| ||||   || ||| || ||| ||||||||| | ||| ||||||||||||     
T  28769391 gctattttggagagtttatggaaataagctgaaaacaacttatggacatatcatatgctatttacacaagctctctcaaataatctcacaagtgcttatg 28769292  T
Q  510 caag--aatagcctcaaataagtcaatccaaacagg 543  Q
    | ||   ||||||| ||||||| ||||| |||||||    
T  28769291 ccagtagatagcctaaaataagacaatcaaaacagg 28769256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 393 - 434
Target Start/End: Original strand, 43709274 - 43709315
Alignment:
Q  393 ataacttgttttcataagctatcctggagagcttatgaaaat 434  Q
    |||| |||||||||| ||||||||||||||||||||||||||    
T  43709274 ataagttgttttcatgagctatcctggagagcttatgaaaat 43709315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 399 - 508
Target Start/End: Complemental strand, 44236886 - 44236777
Alignment:
Q  399 tgttttcataagctatcctggagagcttatgaaaatgagtttaaaacagggtatgaacatgtcatgaactgttttcataagttctctcaaacagtctaac 498  Q
    ||||||||||||||||  |||||||||||||||||| || | |||| |   || || |||||| ||| || ||||||||  ||||| | |||||||| ||    
T  44236886 tgttttcataagctatattggagagcttatgaaaataagctgaaaataacttaagagcatgtcgtgagctattttcatagattctcccgaacagtctcac 44236787  T
Q  499 aagtgcttat 508  Q
    ||||||||||    
T  44236786 aagtgcttat 44236777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 468 - 508
Target Start/End: Complemental strand, 2488002 - 2487962
Alignment:
Q  468 tgttttcataagttctctcaaacagtctaacaagtgcttat 508  Q
    ||||||||||||||||| |||||||||| ||||||||||||    
T  2488002 tgttttcataagttctcccaaacagtctcacaagtgcttat 2487962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 399 - 439
Target Start/End: Complemental strand, 9836917 - 9836877
Alignment:
Q  399 tgttttcataagctatcctggagagcttatgaaaatgagtt 439  Q
    ||||||||||||||||| ||||||||||||| |||||||||    
T  9836917 tgttttcataagctatcttggagagcttatggaaatgagtt 9836877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 333 - 484
Target Start/End: Original strand, 13459585 - 13459737
Alignment:
Q  333 ttatggataagctatttttataacacaacataaaattaagtcattgtttt-tgtataataaataacttgttttcataagctatcctggagagcttatgaa 431  Q
    ||||| ||||||||||| ||| | | || ||||||| ||||||   |||| |||||||   |||| ||||||||||||   |||||  ||||||||||||    
T  13459585 ttatgtataagctatttctatgataaaagataaaatgaagtcaactttttgtgtataagctataagttgttttcataaatcatcctacagagcttatgaa 13459684  T
Q  432 aatgagtttaaaacagggtatgaacatgtcatgaactgttttcataagttctc 484  Q
    |||  | | |||||||  |||||| ||||||| | ||||||||||||||||||    
T  13459685 aataggctgaaaacagtttatgaaaatgtcataagctgttttcataagttctc 13459737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 393 - 508
Target Start/End: Original strand, 24558854 - 24558967
Alignment:
Q  393 ataacttgttttcataagctatcctggagagcttatgaaaatgagtttaaaacagggtatgaacatgtcatgaactgttttcataagttctctcaaacag 492  Q
    |||| |||||||||||||||||| ||||||  | ||| |||| |||| || | ||  ||||||| |||||| |||  |||||||| |||||| |||||||    
T  24558854 ataagttgttttcataagctatcttggagacttaatgtaaataagttgaacatagcttatgaacgtgtcataaac--ttttcataggttctcccaaacag 24558951  T
Q  493 tctaacaagtgcttat 508  Q
    ||| ||||||| ||||    
T  24558952 tctcacaagtgtttat 24558967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 356 - 508
Target Start/End: Original strand, 34849065 - 34849220
Alignment:
Q  356 cacaacataaaattaagtca--ttgtttttgtataataaataacttgttttcataagctatcctggagagcttatgaaaatgagtttaaaacagggtatg 453  Q
    ||||| ||||||| ||||||  || ||||||||||| | ||||  |||| ||||||||| || || ||| |||||| |||| || | ||||| |  ||||    
T  34849065 cacaagataaaataaagtcacattatttttgtataagatataagctgttatcataagctttcttgtagaacttatggaaatcagctgaaaacggcttatg 34849164  T
Q  454 aacatgtcatgaa-ctgttttcataagttctctcaaacagtctaacaagtgcttat 508  Q
    |||||||||| ||  ||||||||| ||||||| |||||||||| | |||| |||||    
T  34849165 aacatgtcataaagttgttttcattagttctcccaaacagtctcaaaagtacttat 34849220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 417 - 500
Target Start/End: Complemental strand, 35644033 - 35643949
Alignment:
Q  417 tggagagcttatgaaaatgagtttaaaacagggtatgaacat-gtcatgaactgttttcataagttctctcaaacagtctaacaa 500  Q
    |||||||||||||||||| |||| |||| ||  |||||| || ||||| |||| |||||||||||| || |||||||||| ||||    
T  35644033 tggagagcttatgaaaataagttgaaaaaagcttatgaaaattgtcataaactattttcataagttatcccaaacagtctcacaa 35643949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 399 - 491
Target Start/End: Original strand, 40071756 - 40071848
Alignment:
Q  399 tgttttcataagctatcctggagagcttatgaaaatgagtttaaaacagggtatgaacatgtcatgaactgttttcataagttctctcaaaca 491  Q
    |||||||| |||||||||| || ||||||||||||| |||| ||| | |  |||||||||||||| |  ||||| |||||| |||| ||||||    
T  40071756 tgttttcagaagctatcctagaaagcttatgaaaattagttgaaagctgattatgaacatgtcataagttgtttccataagctctcccaaaca 40071848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 312 - 355
Target Start/End: Original strand, 6918949 - 6918992
Alignment:
Q  312 aagtgcttatcatataagcgcttatggataagctatttttataa 355  Q
    ||||| |||||||||||| ||||||| |||||||||||||||||    
T  6918949 aagtgtttatcatataagtgcttatgtataagctatttttataa 6918992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 399 - 434
Target Start/End: Original strand, 27028838 - 27028873
Alignment:
Q  399 tgttttcataagctatcctggagagcttatgaaaat 434  Q
    ||||||||||||||||| ||||||||||||||||||    
T  27028838 tgttttcataagctatcttggagagcttatgaaaat 27028873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 325 - 446
Target Start/End: Complemental strand, 34522195 - 34522070
Alignment:
Q  325 ataagcgcttatggataagctatttttataacacaacataaaattaagtca---ttgttttt-gtataataaataacttgttttcataagctatcctgga 420  Q
    ||||||||||||| ||||||||||| ||| |||||| ||||||| ||||||   |  ||||| |||||||  | ||  | |||||| ||||||||||  |    
T  34522195 ataagcgcttatgaataagctatttctatgacacaagataaaataaagtcaaactactttttagtataatctaaaaggtattttcaaaagctatcctaaa 34522096  T
Q  421 gagcttatgaaaatgagtttaaaaca 446  Q
    ||||||||||||||||| | ||||||    
T  34522095 gagcttatgaaaatgaggtaaaaaca 34522070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 468 - 543
Target Start/End: Complemental strand, 6526246 - 6526169
Alignment:
Q  468 tgttttcataagttctctcaaacagtctaacaagtgcttatacaag--aatagcctcaaataagtcaatccaaacagg 543  Q
    ||||||| |||||||||||||||| ||| ||||| |||||| | ||   |||| ||| ||||||||||||||||||||    
T  6526246 tgttttcctaagttctctcaaacaatctcacaagggcttatgccagtagataggctcgaataagtcaatccaaacagg 6526169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 333 - 508
Target Start/End: Original strand, 7646145 - 7646322
Alignment:
Q  333 ttatggataagctatttttataacacaacataaaattaagtca--ttgtttttgtataataaataacttgttttcataagctatcctggagagcttatga 430  Q
    ||||| ||||||||||| ||||| | ||  |||||| |||| |  |||||||||||||||  ||||  ||| ||||||||||  || ||||||||||||     
T  7646145 ttatgtataagctatttctataagaaaaggtaaaataaagttaaattgtttttgtataatctataaactgtcttcataagctgaccaggagagcttatgg 7646244  T
Q  431 aaatgagtttaaaacagggtatgaacatgtcatgaactgttttcataagttctctcaaacagtctaacaagtgcttat 508  Q
    |||| || | |||| ||   || |||||||||| | | |||||||||| ||||| |||||| | | || |||||||||    
T  7646245 aaataagctgaaaatagctgatcaacatgtcataagcagttttcataaattctcccaaacattgtcactagtgcttat 7646322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 398 - 508
Target Start/End: Original strand, 10923602 - 10923712
Alignment:
Q  398 ttgttttcataagctatcctggagagcttatgaaaatgagtttaaaacagggtatgaacatgtcatgaactgttttcataagttctctcaaacagtctaa 497  Q
    |||||||||| |||||| ||||||||||||||||||| || | |||||||  |||  | ||||| |  | |||||||||||  |||||||||  |||| |    
T  10923602 ttgttttcattagctattctggagagcttatgaaaataagataaaaacagtttattgatatgtcttacattgttttcataaactctctcaaattgtctta 10923701  T
Q  498 caagtgcttat 508  Q
    |||||| ||||    
T  10923702 caagtgtttat 10923712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 465 - 511
Target Start/End: Original strand, 10939448 - 10939494
Alignment:
Q  465 aactgttttcataagttctctcaaacagtctaacaagtgcttataca 511  Q
    ||||||||||||||||||||  ||||||||| | |||||||||||||    
T  10939448 aactgttttcataagttctcctaaacagtctcagaagtgcttataca 10939494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 334 - 429
Target Start/End: Complemental strand, 13561442 - 13561345
Alignment:
Q  334 tatggataagctatttttataacacaacataaaattaagtca--ttgtttttgtataataaataacttgttttcataagctatcctggagagcttatg 429  Q
    |||| ||||||||||| ||||||| || || |||| ||||||  |||||||  |||||   |||||||||||||| |||||||| | |||||||||||    
T  13561442 tatgaataagctatttctataacagaaaattaaataaagtcaaattgttttcatataaattataacttgttttcacaagctatcattgagagcttatg 13561345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 399 - 508
Target Start/End: Original strand, 26410286 - 26410396
Alignment:
Q  399 tgttttcataagctatcctggagagcttatgaaaatga-gtttaaaacagggtatgaacatgtcatgaactgttttcataagttctctcaaacagtctaa 497  Q
    |||||||| || || |||||||||||||||| |||| | | | |||||||  | || ||||||||||| |||||| |||||| |||| ||| |||||| |    
T  26410286 tgttttcaaaaactgtcctggagagcttatggaaataaagctaaaaacagcttctggacatgtcatgagctgtttccataagctctcccaagcagtctca 26410385  T
Q  498 caagtgcttat 508  Q
     ||||||||||    
T  26410386 gaagtgcttat 26410396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 399 - 428
Target Start/End: Complemental strand, 6509366 - 6509337
Alignment:
Q  399 tgttttcataagctatcctggagagcttat 428  Q
    ||||||||||||||||||||||||||||||    
T  6509366 tgttttcataagctatcctggagagcttat 6509337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 401 - 434
Target Start/End: Complemental strand, 10075612 - 10075579
Alignment:
Q  401 ttttcataagctatcctggagagcttatgaaaat 434  Q
    ||||||||||||||||| ||||||||||||||||    
T  10075612 ttttcataagctatcctagagagcttatgaaaat 10075579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 402 - 463
Target Start/End: Original strand, 11795102 - 11795163
Alignment:
Q  402 tttcataagctatcctggagagcttatgaaaatgagtttaaaacagggtatgaacatgtcat 463  Q
    |||||||||||||  ||||||||||||| |||| || | |||||||| |||| |||||||||    
T  11795102 tttcataagctattatggagagcttatggaaataagctgaaaacaggttatggacatgtcat 11795163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 399 - 509
Target Start/End: Original strand, 12361199 - 12361311
Alignment:
Q  399 tgttttcataagctatcctggagagcttatgaaaatgagtttaaaacagggtatgaacatgtcatgaactgttttcataag--ttctctcaaacagtcta 496  Q
    |||||||||||| ||| | |||||||| ||| |||| |||| |||||||  |||| ||||||||| | || |||  |||||   ||||||||| ||||||    
T  12361199 tgttttcataagttattcaggagagctaatggaaataagttgaaaacagcttatggacatgtcataagctatttctataagatctctctcaaagagtcta 12361298  T
Q  497 acaagtgcttata 509  Q
    |||||| ||||||    
T  12361299 acaagtacttata 12361311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 450 - 495
Target Start/End: Original strand, 25097433 - 25097478
Alignment:
Q  450 tatgaacatgtcatgaactgttttcataagttctctcaaacagtct 495  Q
    |||||||||||||||| ||||| ||||| |||||| ||||||||||    
T  25097433 tatgaacatgtcatgagctgttctcatatgttctcccaaacagtct 25097478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 393 - 434
Target Start/End: Original strand, 34551121 - 34551162
Alignment:
Q  393 ataacttgttttcataagctatcctggagagcttatgaaaat 434  Q
    |||| |||||||| |||| |||||||||||||||||||||||    
T  34551121 ataagttgttttcttaagttatcctggagagcttatgaaaat 34551162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 455 - 508
Target Start/End: Original strand, 34770931 - 34770984
Alignment:
Q  455 acatgtcatgaactgttttcataagttctctcaaacagtctaacaagtgcttat 508  Q
    ||||||||| | ||||||||||| | ||||||||||||| | ||||||||||||    
T  34770931 acatgtcataagctgttttcataggatctctcaaacagtttcacaagtgcttat 34770984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 348 - 418
Target Start/End: Original strand, 38537545 - 38537617
Alignment:
Q  348 ttttataacacaacataaaattaagtca--ttgtttttgtataataaataacttgttttcataagctatcctg 418  Q
    ||||||||||||| ||||||| ||||||  |||||||||||||||  ||||  || |||||||| ||||||||    
T  38537545 ttttataacacaagataaaatgaagtcaatttgtttttgtataatctataagctgctttcataaactatcctg 38537617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 470 - 511
Target Start/End: Complemental strand, 41398100 - 41398059
Alignment:
Q  470 ttttcataagttctctcaaacagtctaacaagtgcttataca 511  Q
    ||||||||||||||||||||||||||  || |||||||||||    
T  41398100 ttttcataagttctctcaaacagtctcgcaggtgcttataca 41398059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 54; Significance: 2e-21; HSPs: 62)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 403 - 508
Target Start/End: Complemental strand, 31517799 - 31517694
Alignment:
Q  403 ttcataagctatcctggagagcttatgaaaatgagtttaaaacagggtatgaacatgtcatgaactgttttcataagttctctcaaacagtctaacaagt 502  Q
    ||||||| || || |||||||||||||||||| || | |||||||  ||||||||||||||||  |||||| |||||||||| |||||||||| ||||||    
T  31517799 ttcataatctgtcttggagagcttatgaaaataagctgaaaacagcttatgaacatgtcatgagttgttttgataagttctcccaaacagtctcacaagt 31517700  T
Q  503 gcttat 508  Q
    ||||||    
T  31517699 gcttat 31517694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 399 - 493
Target Start/End: Original strand, 37811859 - 37811953
Alignment:
Q  399 tgttttcataagctatcctggagagcttatgaaaatgagtttaaaacagggtatgaacatgtcatgaactgttttcataagttctctcaaacagt 493  Q
    ||||||||||||| ||| ||||||||| ||| |||| |||| |||||||  |||||||||||||| | |||||||||||||||||||||| ||||    
T  37811859 tgttttcataagccatcatggagagctaatggaaataagttgaaaacagtttatgaacatgtcataagctgttttcataagttctctcaaccagt 37811953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 333 - 471
Target Start/End: Complemental strand, 36151636 - 36151496
Alignment:
Q  333 ttatggataagctatttttataacacaacataaaattaagtca--ttgtttttgtataataaataacttgttttcataagctatcctggagagcttatga 430  Q
    ||||| |||||||||||  |||||| || ||||||| ||||||  ||||||| ||||||   |||| |||||||| ||| | ||||| | ||||||||||    
T  36151636 ttatgtataagctatttcaataacaaaagataaaataaagtcaaattgttttcgtataagttataaattgttttcgtaaacaatcctagtgagcttatga 36151537  T
Q  431 aaatgagtttaaaacagggtatgaacatgtcatgaactgtt 471  Q
    |||| |||| |||||||| |||| ||||||||| |||||||    
T  36151536 aaataagttgaaaacaggttatggacatgtcataaactgtt 36151496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 45; E-Value: 6e-16
Query Start/End: Original strand, 321 - 543
Target Start/End: Original strand, 17269177 - 17269403
Alignment:
Q  321 tcatataagcgcttatggataagctatttttataacacaacataaaattaagtca--ttgtttttgtataataaataacttgttttcataagctatcctg 418  Q
    ||||||||| ||||||| ||||| ||||| || |||| ||   ||||| ||||||  |||||||  |||||  ||||| |||||||||||||||||||||    
T  17269177 tcatataagtgcttatgtataagttatttctagaacaaaagtgaaaataaagtcaaattgttttcatataagcaataagttgttttcataagctatcctg 17269276  T
Q  419 gagagcttatgaaaatgagtttaaaacagggtatgaacatgtcatgaactgttttcataagttctctcaaacagtctaacaagtgcttatacaaga--at 516  Q
    ||||||||| |  ||| |||| ||||||    ||||||||||||| |  | ||||||||||  ||  |||||| ||| ||||||| ||| | ||||  ||    
T  17269277 gagagcttacggtaataagttaaaaacaactcatgaacatgtcataaggtattttcataagcactaccaaacaatctcacaagtgtttaaataagaagat 17269376  T
Q  517 agcctcaaataagtcaatccaaacagg 543  Q
    |   |||||||||||||||||||||||    
T  17269377 aagttcaaataagtcaatccaaacagg 17269403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 45; E-Value: 6e-16
Query Start/End: Original strand, 398 - 482
Target Start/End: Original strand, 35925696 - 35925780
Alignment:
Q  398 ttgttttcataagctatcctggagagcttatgaaaatgagtttaaaacagggtatgaacatgtcatgaactgttttcataagttc 482  Q
    |||||| ||||||||||| ||||||| ||||| |||| |||| |||||||  |||||||||||||| | ||||||||||||||||    
T  35925696 ttgtttccataagctatcatggagagtttatggaaataagttgaaaacagcttatgaacatgtcataagctgttttcataagttc 35925780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 332 - 508
Target Start/End: Complemental strand, 10199540 - 10199362
Alignment:
Q  332 cttatggataagctatttttataacacaacataaaattaagtcat--tgtttttgtataataaataacttgttttcataagctatcctggagagcttatg 429  Q
    ||||| |||||| ||||| |||||| ||| ||||||| ||||||   | |||| |||||||  ||||  | ||||||||||||||  | |||||||||||    
T  10199540 cttatagataagttatttctataacccaagataaaataaagtcaaactattttcgtataatcgataagcttttttcataagctattttagagagcttatg 10199441  T
Q  430 aaaatgagtttaaaacagggtatgaacatgtcatgaactgttttcataagttctctcaaacagtctaacaagtgcttat 508  Q
    ||||| || | ||||||   |||||||||||||| | || ||||||| ||||||| |||| ||| | ||||||||||||    
T  10199440 aaaataagctgaaaacaacttatgaacatgtcataagctattttcatgagttctcccaaatagtgtcacaagtgcttat 10199362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 43; E-Value: 0.000000000000009
Query Start/End: Original strand, 401 - 507
Target Start/End: Original strand, 4445717 - 4445823
Alignment:
Q  401 ttttcataagctatcctggagagcttatgaaaatgagtttaaaacagggtatgaacatgtcatgaactgttttcataagttctctcaaacagtctaacaa 500  Q
    ||||||||||||  | |||||||||| ||||||| |||| |||||||  | ||||||||| || | ||| |||||||| ||||| |||||||||| ||||    
T  4445717 ttttcataagctgacttggagagcttgtgaaaataagttgaaaacagcttctgaacatgttataagctgctttcataaattctcccaaacagtctcacaa 4445816  T
Q  501 gtgctta 507  Q
    |||||||    
T  4445817 gtgctta 4445823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 43; E-Value: 0.000000000000009
Query Start/End: Original strand, 402 - 508
Target Start/End: Complemental strand, 37593744 - 37593638
Alignment:
Q  402 tttcataagctatcctggagagcttatgaaaatgagtttaaaacagggtatgaacatgtcatgaactgttttcataagttctctcaaacagtctaacaag 501  Q
    |||||||||||||  || ||||||||||||||| || | |||||||  |||||||||||||| |  ||| ||||| |||| || ||||||||||||||||    
T  37593744 tttcataagctattttgaagagcttatgaaaataagctgaaaacagcttatgaacatgtcataagttgtgttcattagttttcccaaacagtctaacaag 37593645  T
Q  502 tgcttat 508  Q
    || ||||    
T  37593644 tgtttat 37593638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 400 - 508
Target Start/End: Complemental strand, 49692112 - 49692006
Alignment:
Q  400 gttttcataagctatcctggagagcttatgaaaatgagtttaaaacagggtatgaacatgtcatgaactgttttcataagttctctcaaacagtctaaca 499  Q
    ||||||||||| ||||||||||| || |||||||| || | ||||||   |||| ||||||||| | || |||||||||||||||||||||||||| |||    
T  49692112 gttttcataagttatcctggagaact-atgaaaat-agctgaaaacaaactatggacatgtcataagctattttcataagttctctcaaacagtctcaca 49692015  T
Q  500 agtgcttat 508  Q
    ||| |||||    
T  49692014 agttcttat 49692006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 40; E-Value: 0.0000000000005
Query Start/End: Original strand, 316 - 375
Target Start/End: Original strand, 870967 - 871026
Alignment:
Q  316 gcttatcatataagcgcttatggataagctatttttataacacaacataaaattaagtca 375  Q
    |||||||||||||| ||||||| |||| |||||||||||||| || ||||||||||||||    
T  870967 gcttatcatataagtgcttatgtataaactatttttataacaaaagataaaattaagtca 871026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 40; E-Value: 0.0000000000005
Query Start/End: Original strand, 332 - 444
Target Start/End: Original strand, 35017512 - 35017628
Alignment:
Q  332 cttatggataagctatttttataacacaacataaaattaagtcat----tgtttttgtataataaataacttgttttcataagctatcctggagagctta 427  Q
    |||||| ||||||||||||||||| |||| ||||||| ||||||     |||||| |||||||  |||   |||||||||||||| ||||||||||||||    
T  35017512 cttatgaataagctatttttataatacaagataaaataaagtcaaacactgttttcgtataatctatatgctgttttcataagctgtcctggagagctta 35017611  T
Q  428 tgaaaatgagtttaaaa 444  Q
    || |||| |||| ||||    
T  35017612 tggaaataagttgaaaa 35017628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 393 - 479
Target Start/End: Original strand, 25479582 - 25479668
Alignment:
Q  393 ataacttgttttcataagctatcctggagagcttatgaaaatgagtttaaaacagggtatgaacatgtcatgaactgttttcataag 479  Q
    |||| |||||||||||||||||||| |||||||||||||||| || | ||||||    ||||||||||||| | || ||||||||||    
T  25479582 ataagttgttttcataagctatcctagagagcttatgaaaataagctgaaaacaactaatgaacatgtcataatctattttcataag 25479668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 38; E-Value: 0.000000000009
Query Start/End: Original strand, 317 - 447
Target Start/End: Original strand, 4200152 - 4200284
Alignment:
Q  317 cttatcatataagcgcttatggataagctatttttataacacaacataaaattaagtca--ttgtttttgtataataaataacttgttttcataagctat 414  Q
    |||||||| |||| | ||||  ||||| ||||||||||||| || ||||||| ||||||  |||||||  |||||   |||  |||||||| |||| |||    
T  4200152 cttatcatctaagtgtttatatataagttatttttataacaaaagataaaataaagtcaagttgttttcatataagctatatattgttttcgtaagatat 4200251  T
Q  415 cctggagagcttatgaaaatgagtttaaaacag 447  Q
    ||||||| |||||||||||| || |||||||||    
T  4200252 cctggagggcttatgaaaataagcttaaaacag 4200284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 38; E-Value: 0.000000000009
Query Start/End: Original strand, 379 - 508
Target Start/End: Complemental strand, 7137081 - 7136952
Alignment:
Q  379 tttttgtataataaataacttgttttcataagctatcctggagagcttatgaaaatgagtttaaaacagggtatgaacatgtcatgaactgttttcataa 478  Q
    ||||||||||||  ||||  ||||||||||||||||| |||||| ||||||||||| || | |||| |   |||||| ||||||| | |  |||||||||    
T  7137081 tttttgtataatctataagctgttttcataagctatcttggagaacttatgaaaataagctgaaaataacttatgaatatgtcataagcgattttcataa 7136982  T
Q  479 gttctctcaaacagtctaacaagtgcttat 508  Q
    ||||| ||||||  | ||||||||| ||||    
T  7136981 gttctttcaaactctttaacaagtgtttat 7136952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 38; E-Value: 0.000000000009
Query Start/End: Original strand, 375 - 463
Target Start/End: Original strand, 7472294 - 7472383
Alignment:
Q  375 attgtttttgtataataaataacttgttttcataagctatcctggagagcttatgaaaatgagtttaaaacag-ggtatgaacatgtcat 463  Q
    ||||||||||||||||  ||||  ||||| ||||||||||| |||||||||||||||||| || | |||||||   ||||||||||||||    
T  7472294 attgtttttgtataatctataagctgtttccataagctatcttggagagcttatgaaaataagctgaaaacagttttatgaacatgtcat 7472383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 38; E-Value: 0.000000000009
Query Start/End: Original strand, 398 - 487
Target Start/End: Complemental strand, 24460471 - 24460382
Alignment:
Q  398 ttgttttcataagctatcctggagagcttatgaaaatgagtttaaaacagggtatgaacatgtcatgaactgttttcataagttctctca 487  Q
    |||||||||||||||||||| |||||||||  ||||| || |  ||||||  |||||||||||||| | || ||||||||| ||||||||    
T  24460471 ttgttttcataagctatccttgagagcttacaaaaataagctggaaacagcttatgaacatgtcataagctattttcataatttctctca 24460382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 38; E-Value: 0.000000000009
Query Start/End: Original strand, 399 - 508
Target Start/End: Complemental strand, 33723445 - 33723336
Alignment:
Q  399 tgttttcataagctatcctggagagcttatgaaaatgagtttaaaacagggtatgaacatgtcatgaactgttttcataagttctctcaaacagtctaac 498  Q
    ||||||||||||||| |||| | |||||||| |||| || | ||||||    ||||||||||||||| |||||| |||||||| || ||| |||||| ||    
T  33723445 tgttttcataagctaccctgtaaagcttatggaaataagctgaaaacatctcatgaacatgtcatgagctgtttccataagttttcccaagcagtctcac 33723346  T
Q  499 aagtgcttat 508  Q
    ||||| ||||    
T  33723345 aagtgtttat 33723336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 341 - 489
Target Start/End: Original strand, 3924571 - 3924721
Alignment:
Q  341 aagctatttttataacacaacataaaattaagtcat--tgtttttgtataataaataacttgttttcataagctatcctggagagcttatgaaaatgagt 438  Q
    ||||||||| |||||||||| ||||||| ||| ||   |||||| |||||||  || | ||||||| ||||||||||||| |||| ||||| |||| ||     
T  3924571 aagctatttctataacacaagataaaatcaaggcaaactgttttcgtataatctattagttgtttttataagctatcctgaagagtttatggaaataagc 3924670  T
Q  439 ttaaaacagggtatgaacatgtcatgaactgttttcataagttctctcaaa 489  Q
      ||||||   ||| ||||| |||| || |||||||||||||| |||||||    
T  3924671 cgaaaacaacttataaacatttcataaattgttttcataagttttctcaaa 3924721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 401 - 508
Target Start/End: Original strand, 6279408 - 6279515
Alignment:
Q  401 ttttcataagctatcctggagagcttatgaaaatgagtttaaaacagggtatgaacatgtcatgaactgttttcataagttctctcaaacagtctaacaa 500  Q
    ||||||||||||||||| ||||||||||| ||||  | | ||||||   |||| ||||||  | |||||||| |||||| |||||||||||| |  ||||    
T  6279408 ttttcataagctatcctagagagcttatggaaatacgctgaaaacaacttatggacatgtggttaactgtttccataagctctctcaaacagccacacaa 6279507  T
Q  501 gtgcttat 508  Q
    ||||||||    
T  6279508 gtgcttat 6279515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.0000000005
Query Start/End: Original strand, 399 - 541
Target Start/End: Complemental strand, 172639 - 172492
Alignment:
Q  399 tgttttcataagctatcctggagagcttatgaaaatgagtttaaaacagggtatgaacatgtcatgaactgttttcataagttctctcaaacagtct--- 495  Q
    ||||||||| ||||||| ||||||  ||||  | || |||| |||||||  |||||||||| ||| |||||||||||||| ||||| || ||||| |       
T  172639 tgttttcattagctatcttggagaaattattgatataagttaaaaacagcctatgaacatgccataaactgttttcataaattctcccagacagtgtcac 172540  T
Q  496 aacaagtgcttatacaag--aatagcctcaaataagtcaatccaaaca 541  Q
    ||||||||||||  ||||   |||  ||||||||||||||||||||||    
T  172539 aacaagtgcttaggcaagtagataaactcaaataagtcaatccaaaca 172492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.0000000005
Query Start/End: Original strand, 393 - 447
Target Start/End: Complemental strand, 7218143 - 7218089
Alignment:
Q  393 ataacttgttttcataagctatcctggagagcttatgaaaatgagtttaaaacag 447  Q
    |||| |||||||||||| |||||||||||| ||||||||||| |||| |||||||    
T  7218143 ataagttgttttcataacctatcctggagaacttatgaaaataagttgaaaacag 7218089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.0000000005
Query Start/End: Original strand, 315 - 474
Target Start/End: Original strand, 10854654 - 10854815
Alignment:
Q  315 tgcttatcatataagcgcttatggataagctatttttataacacaacataaaattaagtcat--tgtttttgtataataaataacttgttttcataagct 412  Q
    ||||||||||||||| | ||||| ||||| ||||| |  || |||| ||||||| ||||||   || |||||||||||  |||  |||||||||||  ||    
T  10854654 tgcttatcatataagtggttatgaataagttatttctgaaatacaagataaaataaagtcaaactgattttgtataatctatatgttgttttcatatact 10854753  T
Q  413 atcctggagagcttatgaaaatgagtttaaaacagggtatgaacatgtcatgaactgttttc 474  Q
    |||||| | |||||| |||||| || | |||||||  | |||||||||||| | ||||||||    
T  10854754 atcctgaacagcttaagaaaataagctgaaaacagcttgtgaacatgtcataagctgttttc 10854815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.0000000005
Query Start/End: Original strand, 393 - 483
Target Start/End: Complemental strand, 37842424 - 37842334
Alignment:
Q  393 ataacttgttttcataagctatcctggagagcttatgaaaatgagtttaaaacagggtatgaacatgtcatgaactgttttcataagttct 483  Q
    |||| |||||||||||||||||| || ||| ||||| ||||| || | ||||| |  |||||||||||||| |  ||||||||||||||||    
T  37842424 ataagttgttttcataagctatcttgaagaacttataaaaataagctgaaaactgcttatgaacatgtcattagatgttttcataagttct 37842334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.0000000005
Query Start/End: Original strand, 401 - 483
Target Start/End: Original strand, 43338125 - 43338207
Alignment:
Q  401 ttttcataagctatcctggagagcttatgaaaatgagtttaaaacagggtatgaacatgtcatgaactgttttcataagttct 483  Q
    ||||||||||||| | ||||||||||||||||||  | | |||| ||  |||||||||||||| | |||||| ||||||||||    
T  43338125 ttttcataagctaacatggagagcttatgaaaataggctgaaaatagattatgaacatgtcataagctgtttccataagttct 43338207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 403 - 508
Target Start/End: Complemental strand, 32515500 - 32515395
Alignment:
Q  403 ttcataagctatcctggagagcttatgaaaatgagtttaaaacagggtatgaacatgtcatgaactgttttcataagttctctcaaacagtctaacaagt 502  Q
    ||||||||||||| ||||||||||||  | || |||| ||||||   |||  |||||||||   |||||| |||||| |||| |||||||||| ||||||    
T  32515500 ttcataagctatcatggagagcttatagatataagttgaaaacaacttattgacatgtcatacgctgtttccataagctctcccaaacagtctcacaagt 32515401  T
Q  503 gcttat 508  Q
    ||||||    
T  32515400 gcttat 32515395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 467 - 508
Target Start/End: Complemental strand, 43371886 - 43371845
Alignment:
Q  467 ctgttttcataagttctctcaaacagtctaacaagtgcttat 508  Q
    ||||||||||||| ||||||||||||||| ||||||||||||    
T  43371886 ctgttttcataagctctctcaaacagtctcacaagtgcttat 43371845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 401 - 473
Target Start/End: Original strand, 5047155 - 5047227
Alignment:
Q  401 ttttcataagctatcctggagagcttatgaaaatgagtttaaaacagggtatgaacatgtcatgaactgtttt 473  Q
    ||||||||||||||| || |||||||||| |||| || | ||||||| ||||||| ||||| | |||||||||    
T  5047155 ttttcataagctatcatgaagagcttatggaaataagctgaaaacagcgtatgaatatgtccttaactgtttt 5047227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 401 - 505
Target Start/End: Complemental strand, 7262579 - 7262475
Alignment:
Q  401 ttttcataagctatcctggagagcttatgaaaatgagtttaaaacagggtatgaacatgtcatgaactgttttcataagttctctcaaacagtctaacaa 500  Q
    |||||||||||||||||| ||||||| || |||| || | |||||||  |||||||||||||  | ||||||| ||||| ||||  |||| |||| | ||    
T  7262579 ttttcataagctatcctgaagagcttgtggaaataaggtgaaaacagcttatgaacatgtcaaaagctgtttttataagctctccaaaaccgtctcaaaa 7262480  T
Q  501 gtgct 505  Q
    |||||    
T  7262479 gtgct 7262475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 398 - 478
Target Start/End: Original strand, 11137851 - 11137930
Alignment:
Q  398 ttgttttcataagctatcctggagagcttatgaaaatgagtttaaaacagggtatgaacatgtcatgaactgttttcataa 478  Q
    ||||||| |||||||||| ||| |||||||| ||||  || | |||||||  |||||||||||||| ||||||||||||||    
T  11137851 ttgttttgataagctatcatggtgagcttataaaaaaaagct-aaaacagcatatgaacatgtcataaactgttttcataa 11137930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 399 - 479
Target Start/End: Complemental strand, 11639479 - 11639399
Alignment:
Q  399 tgttttcataagctatcctggagagcttatgaaaatgagtttaaaacagggtatgaacatgtcatgaactgttttcataag 479  Q
    ||||| |||||| ||| || |||||||||||||||| || | |||||||  |||| ||||||||| | |||||||||||||    
T  11639479 tgtttgcataagttattctagagagcttatgaaaataagctaaaaacagcttatggacatgtcataagctgttttcataag 11639399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 393 - 433
Target Start/End: Complemental strand, 25005866 - 25005826
Alignment:
Q  393 ataacttgttttcataagctatcctggagagcttatgaaaa 433  Q
    |||| ||||||||||||||||||||||||||||||| ||||    
T  25005866 ataagttgttttcataagctatcctggagagcttataaaaa 25005826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 393 - 538
Target Start/End: Original strand, 29723490 - 29723637
Alignment:
Q  393 ataacttgttttcataagctatcctggagagcttatgaaaatgagtttaaaacagggtatgaacatgtcatgaactgttttcataagttctctcaaacag 492  Q
    |||| ||| ||||| |||||| |||| || | ||||| |||| |||| |||||||  |||| ||||||||| | |||||| ||| |||||| |||||| |    
T  29723490 ataagttgctttcacaagctaccctgcagtggttatgtaaataagttgaaaacagtttatggacatgtcataagctgtttccattagttctttcaaactg 29723589  T
Q  493 tctaacaagtgcttatacaag--aatagcctcaaataagtcaatccaa 538  Q
    | | |||||||||||| | ||  ||||  ||||||| |||||||||||    
T  29723590 tatcacaagtgcttatgctagtaaataagctcaaattagtcaatccaa 29723637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 398 - 434
Target Start/End: Complemental strand, 38651495 - 38651459
Alignment:
Q  398 ttgttttcataagctatcctggagagcttatgaaaat 434  Q
    ||||||||||||||||||||||||||||||| |||||    
T  38651495 ttgttttcataagctatcctggagagcttataaaaat 38651459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 393 - 429
Target Start/End: Complemental strand, 47598490 - 47598454
Alignment:
Q  393 ataacttgttttcataagctatcctggagagcttatg 429  Q
    |||| ||||||||||||||||||||||||||||||||    
T  47598490 ataagttgttttcataagctatcctggagagcttatg 47598454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 399 - 494
Target Start/End: Original strand, 4576812 - 4576907
Alignment:
Q  399 tgttttcataagctatcctggagagcttatgaaaatgagtttaaaacagggtatgaacatgtcatgaactgttttcataagttctctcaaacagtc 494  Q
    ||||||||||||||||  || | | ||||||||||| || | || |||   ||| |||||||||| |||| |||||||||||| ||||||||||||    
T  4576812 tgttttcataagctatattgaataacttatgaaaataagctgaacacaacttataaacatgtcataaactattttcataagttgtctcaaacagtc 4576907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 401 - 480
Target Start/End: Complemental strand, 4699676 - 4699597
Alignment:
Q  401 ttttcataagctatcctggagagcttatgaaaatgagtttaaaacagggtatgaacatgtcatgaactgttttcataagt 480  Q
    ||||||||| |||||| |||||||||||  |||| || | |||||||  |||||||||||||| |  |||||||||||||    
T  4699676 ttttcataaactatcccggagagcttatagaaataagctaaaaacagcttatgaacatgtcataagttgttttcataagt 4699597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 417 - 508
Target Start/End: Original strand, 6292518 - 6292608
Alignment:
Q  417 tggagagcttatgaaaatgagtttaaaacagggtatgaacatgtcatgaactgttttcataagttctctcaaacagtctaacaagtgcttat 508  Q
    |||||||||||||||||| || | |||||||  |||||||||||||| | ||||||| | || ||||| |||||| ||| | ||||||||||    
T  6292518 tggagagcttatgaaaataagctgaaaacagcttatgaacatgtcataagctgtttt-aaaaattctcccaaacaatctcaaaagtgcttat 6292608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 399 - 490
Target Start/End: Original strand, 10744308 - 10744399
Alignment:
Q  399 tgttttcataagctatcctggagagcttatgaaaatgagtttaaaacagggtatgaacatgtcatgaactgttttcataagttctctcaaac 490  Q
    |||||||||||||| || | |||| ||||| ||||| || | |||||||  |||||||||| ||| | ||||||||| |||||||| |||||    
T  10744308 tgttttcataagctgtcttagagaacttataaaaataagatgaaaacagcttatgaacatgccataagctgttttcacaagttctcccaaac 10744399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 316 - 434
Target Start/End: Original strand, 19389824 - 19389943
Alignment:
Q  316 gcttatcatataagcgcttatggataagctatttttataacacaacataaaattaagtcattgt-ttttgtataataaataacttgttttcataagctat 414  Q
    |||||||||||||   |||||  ||||| || |||||| |||||| ||||||| ||||||   | |||||||||| || | | | |||||||||||||||    
T  19389824 gcttatcatataataacttataaataagttacttttattacacaatataaaataaagtcaaactgttttgtataagaatttaatagttttcataagctat 19389923  T
Q  415 cctggagagcttatgaaaat 434  Q
    | |||||||||| |||||||    
T  19389924 cttggagagcttgtgaaaat 19389943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 406 - 493
Target Start/End: Complemental strand, 28689508 - 28689421
Alignment:
Q  406 ataagctatcctggagagcttatgaaaatgagtttaaaacagggtatgaacatgtcatgaactgttttcataagttctctcaaacagt 493  Q
    |||||||||| |||| ||||||||||||| || | ||||||   |||| ||||||||| | |||||| | |||||||||| |||||||    
T  28689508 ataagctatcttggaaagcttatgaaaataagctgaaaacaacttatggacatgtcataagctgtttccgtaagttctctaaaacagt 28689421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 375 - 478
Target Start/End: Original strand, 39596580 - 39596682
Alignment:
Q  375 attgtttttgtataataaataacttgttttcataagctatcctggagagcttatgaaaatgagtttaaaacagggtatgaacatgtcatgaactgttttc 474  Q
    |||||||||||||||   ||||  || ||| |||||||||| |||||||||||| ||||| || || ||||||  ||  |||||||||| ||||||||||    
T  39596580 attgtttttgtataagctataagatggttttataagctatcttggagagcttataaaaataag-ttgaaacagcttaccaacatgtcataaactgttttc 39596678  T
Q  475 ataa 478  Q
    ||||    
T  39596679 ataa 39596682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 401 - 508
Target Start/End: Original strand, 44422708 - 44422815
Alignment:
Q  401 ttttcataagctatcctggagagcttatgaaaatgagtttaaaacagggtatgaacatgtcatgaactgttttcataagttctctcaaacagtctaacaa 500  Q
    |||| ||||||||||||||||||||||||||||| || |  |  |||  |||| ||||||||| | || |||||||||| |||| || ||||||| | ||    
T  44422708 tttttataagctatcctggagagcttatgaaaataagctgtagtcagcttatggacatgtcataagctattttcataagctctcccagacagtctcaaaa 44422807  T
Q  501 gtgcttat 508  Q
    ||| ||||    
T  44422808 gtgtttat 44422815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 454 - 508
Target Start/End: Complemental strand, 5421952 - 5421898
Alignment:
Q  454 aacatgtcatgaactgttttcataagttctctcaaacagtctaacaagtgcttat 508  Q
    |||||||| | ||||||||| |||||||||| ||||| |||| ||||||||||||    
T  5421952 aacatgtcttaaactgtttttataagttctcacaaacggtctcacaagtgcttat 5421898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 411 - 477
Target Start/End: Original strand, 11695880 - 11695946
Alignment:
Q  411 ctatcctggagagcttatgaaaatgagtttaaaacagggtatgaacatgtcatgaactgttttcata 477  Q
    |||| ||||| ||||||||||||| |||| |||||||  |||| ||||||||| |||||||| ||||    
T  11695880 ctattctggaaagcttatgaaaataagttgaaaacagcttatggacatgtcataaactgtttccata 11695946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 406 - 508
Target Start/End: Complemental strand, 19092439 - 19092338
Alignment:
Q  406 ataagctatcctggagagcttatgaaaatgagtttaaaacagggtatgaacatgtcatgaactgttttcataagttctctcaaacagtctaacaagtgct 505  Q
    ||||||||||||| ||||||||||||||| || | |||||||  |||| |||||||||  ||| |||||||||  | |||| ||||||||  |||| |||    
T  19092439 ataagctatcctgaagagcttatgaaaataaggtgaaaacagtttatg-acatgtcatagactattttcataaactgtctcgaacagtctcgcaagagct 19092341  T
Q  506 tat 508  Q
    |||    
T  19092340 tat 19092338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 450 - 508
Target Start/End: Original strand, 27807173 - 27807231
Alignment:
Q  450 tatgaacatgtcatgaactgttttcataagttctctcaaacagtctaacaagtgcttat 508  Q
    |||||||| ||||| | ||| ||||||||| ||||||||||||||| |||| |||||||    
T  27807173 tatgaacacgtcatcagctgctttcataagctctctcaaacagtcttacaaatgcttat 27807231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 450 - 500
Target Start/End: Original strand, 38001654 - 38001704
Alignment:
Q  450 tatgaacatgtcatgaactgttttcataagttctctcaaacagtctaacaa 500  Q
    |||||||| ||||| | |||||||||||||||||| |||||||||| ||||    
T  38001654 tatgaacaggtcataagctgttttcataagttctcccaaacagtctcacaa 38001704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 401 - 439
Target Start/End: Complemental strand, 45667823 - 45667785
Alignment:
Q  401 ttttcataagctatcctggagagcttatgaaaatgagtt 439  Q
    ||||| |||||||||||||||||||||||||||| ||||    
T  45667823 ttttcttaagctatcctggagagcttatgaaaataagtt 45667785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 428 - 493
Target Start/End: Original strand, 4481966 - 4482031
Alignment:
Q  428 tgaaaatgagtttaaaacagggtatgaacatgtcatgaactgttttcataagttctctcaaacagt 493  Q
    ||||||| || | |||||||  ||||||||||| || |  ||||||||||||||||||||||||||    
T  4481966 tgaaaataagctaaaaacagcttatgaacatgtaataagttgttttcataagttctctcaaacagt 4482031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 399 - 508
Target Start/End: Original strand, 4622100 - 4622209
Alignment:
Q  399 tgttttcataagctatcctggagagcttatgaaaatgagtttaaaacagggtatgaacatgtcatgaactgttttcataagttctctcaaacagtctaac 498  Q
    ||||| |||| |||||| |||||||||| ||||||| || | |||||||  |||| ||||||||| |  ||||  ||| || |||  |||||||||||||    
T  4622100 tgtttccatatgctatcttggagagcttgtgaaaataagctaaaaacagcttatggacatgtcataagatgttcccattagatcttccaaacagtctaac 4622199  T
Q  499 aagtgcttat 508  Q
    |||| |||||    
T  4622200 aagttcttat 4622209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 468 - 541
Target Start/End: Complemental strand, 5886982 - 5886911
Alignment:
Q  468 tgttttcataagttctctcaaacagtctaacaagtgcttatacaagaatagcctcaaataagtcaatccaaaca 541  Q
    ||||||||||||||||| ||||||||||  ||| ||||||| | |||  ||| |||||||||||||||||||||    
T  5886982 tgttttcataagttctc-caaacagtctcgcaattgcttatgccagataagc-tcaaataagtcaatccaaaca 5886911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 467 - 508
Target Start/End: Original strand, 8382416 - 8382457
Alignment:
Q  467 ctgttttcataagttctctcaaacagtctaacaagtgcttat 508  Q
    ||||||||||||||||||||||| ||||| |||| |||||||    
T  8382416 ctgttttcataagttctctcaaagagtctcacaaatgcttat 8382457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 375 - 424
Target Start/End: Original strand, 23445317 - 23445366
Alignment:
Q  375 attgtttttgtataataaataacttgttttcataagctatcctggagagc 424  Q
    |||||||||||||||   |||| |||||||||||||||||| ||||||||    
T  23445317 attgtttttgtataagccataagttgttttcataagctatcttggagagc 23445366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 393 - 446
Target Start/End: Complemental strand, 26779994 - 26779941
Alignment:
Q  393 ataacttgttttcataagctatcctggagagcttatgaaaatgagtttaaaaca 446  Q
    |||| |||||||||||||||||| || ||| ||||||||||| |||| ||||||    
T  26779994 ataagttgttttcataagctatcttgaagaacttatgaaaataagttgaaaaca 26779941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 398 - 463
Target Start/End: Original strand, 30257689 - 30257754
Alignment:
Q  398 ttgttttcataagctatcctggagagcttatgaaaatgagtttaaaacagggtatgaacatgtcat 463  Q
    |||||||||||| ||||||||||| ||||||  |||| || | |||||||  ||||||||||||||    
T  30257689 ttgttttcataaactatcctggagggcttatagaaataagctgaaaacagcttatgaacatgtcat 30257754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 339 - 493
Target Start/End: Complemental strand, 33186082 - 33185927
Alignment:
Q  339 ataagctatttttataacacaacataaaattaagtc--attgtttttgtataataaataacttgttttcataagctatcctggagagcttatgaaaatga 436  Q
    ||||||||||| ||| ||| || ||||||| | |||  ||||||||| || ||   |||| ||||||| |||||||||||| ||||  | ||| |||| |    
T  33186082 ataagctatttctattacagaagataaaataaggtcgaattgtttttatacaagttataagttgtttttataagctatcctagagatat-atgtaaataa 33185984  T
Q  437 gtttaaaacagggtatgaacatgtcatgaactgttttcataagttctctcaaacagt 493  Q
    ||| |||||||| |||| | ||||||| |  |||||||||||  |||||||||||||    
T  33185983 gttgaaaacaggttatggaaatgtcataatttgttttcataaactctctcaaacagt 33185927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 325 - 431
Target Start/End: Complemental strand, 33527286 - 33527178
Alignment:
Q  325 ataagcgcttatggataagctatttttataacacaacataaaattaagtc--attgtttttgtataataaataacttgttttcataagctatcctggaga 422  Q
    ||||||||||||| ||||||||||| || |||| || |||||||  ||||  | ||||||  ||||||  ||||  |||||||||||| |||||| ||||    
T  33527286 ataagcgcttatgaataagctatttctaaaacaaaagataaaatacagtcaaactgttttcatataatctataagctgttttcataagttatcctcgaga 33527187  T
Q  423 gcttatgaa 431  Q
     ||||||||    
T  33527186 tcttatgaa 33527178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 450 - 503
Target Start/End: Complemental strand, 38170702 - 38170649
Alignment:
Q  450 tatgaacatgtcatgaactgttttcataagttctctcaaacagtctaacaagtg 503  Q
    |||||||||||||| | ||||||||||||| |||| ||| |||||| |||||||    
T  38170702 tatgaacatgtcataagctgttttcataagctctcccaagcagtctcacaagtg 38170649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 399 - 484
Target Start/End: Complemental strand, 39270488 - 39270403
Alignment:
Q  399 tgttttcataagctatcctggagagcttatgaaaatgagtttaaaacagggtatgaacatgtcatgaactgttttcataagttctc 484  Q
    ||||||||||||||| | | |||||| ||||||||| |||| |||||||  |||| ||||| ||  | ||||||||||||| ||||    
T  39270488 tgttttcataagctaccatagagagcatatgaaaataagttgaaaacagcttatggacatgccaaaagctgttttcataagctctc 39270403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 455 - 508
Target Start/End: Original strand, 42336678 - 42336731
Alignment:
Q  455 acatgtcatgaactgttttcataagttctctcaaacagtctaacaagtgcttat 508  Q
    ||||||||| |  |||||||||||||| ||||||||||||  ||||||||||||    
T  42336678 acatgtcataagttgttttcataagttatctcaaacagtcgcacaagtgcttat 42336731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 318 - 508
Target Start/End: Complemental strand, 44032145 - 44031953
Alignment:
Q  318 ttatcatataagcgcttatggataagctatttttataacacaacataaaattaagtca--ttgtttttgtataataaataacttgttttcataagctatc 415  Q
    |||||||||||| | ||||| ||||||  ||| ||||||| ||  |||||| ||||||  |||||||  |||||   ||||  | ||||| |||| ||||    
T  44032145 ttatcatataagtgtttatgtataagccgtttctataacaaaagctaaaataaagtcaaattgttttcatataagctataaactattttcttaagttatc 44032046  T
Q  416 ctggagagcttatgaaaatgagtttaaaacagggtatgaacatgtcatgaactgttttcataagttctctcaaacagtctaacaagtgcttat 508  Q
     || |||||||||| |||| || | |||| ||  |||| ||||||||| | ||| || |||||| ||||  | ||||||||||||||||||||    
T  44032045 ttgaagagcttatggaaattagctgaaaatagcttatggacatgtcattagctgcttacataagctctcctagacagtctaacaagtgcttat 44031953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 316 - 373
Target Start/End: Original strand, 52286600 - 52286657
Alignment:
Q  316 gcttatcatataagcgcttatggataagctatttttataacacaacataaaattaagt 373  Q
    |||||||||||||||||||||| ||||| ||||| || |||| || ||||||| ||||    
T  52286600 gcttatcatataagcgcttatgaataagatatttctacaacaaaagataaaataaagt 52286657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 51; Significance: 1e-19; HSPs: 63)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 331 - 513
Target Start/End: Original strand, 39621890 - 39622072
Alignment:
Q  331 gcttatggataagctatttttataacacaacataaaattaagtcattgtttttgtataataaataacttgttttcataagctatcctggagagcttatga 430  Q
    ||||||| ||||| ||||| |||||||||| ||||||| ||||||   ||||||||||||  ||||  |||||||||||| ||||| |   |||||| |     
T  39621890 gcttatgaataagatatttctataacacaaaataaaataaagtcaaactttttgtataatctataagctgttttcataagttatccggacaagcttaagg 39621989  T
Q  431 aaatgagtttaaaacagggtatgaacatgtcatgaactgttttcataagttctctcaaacagtctaacaagtgcttatacaag 513  Q
    |||| || | ||||||   ||||||  |||||| |  |||||||||||||||||||||||||| |  ||||||||||||||||    
T  39621990 aaataagctgaaaacaatttatgaatttgtcataagttgttttcataagttctctcaaacagtgtcgcaagtgcttatacaag 39622072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 47; E-Value: 4e-17
Query Start/End: Original strand, 398 - 508
Target Start/End: Complemental strand, 12313237 - 12313127
Alignment:
Q  398 ttgttttcataagctatcctggagagcttatgaaaatgagtttaaaacagggtatgaacatgtcatgaactgttttcataagttctctcaaacagtctaa 497  Q
    |||||| ||||||||||| |||||||||||||||||| || | ||| ||   |||||||||| ||| | |||||||||||| ||||| |||||| ||| |    
T  12313237 ttgtttacataagctatcttggagagcttatgaaaataaggtgaaatcaacttatgaacatggcataagctgttttcataaattctcccaaacaatctca 12313138  T
Q  498 caagtgcttat 508  Q
    |||||||||||    
T  12313137 caagtgcttat 12313127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 47; E-Value: 4e-17
Query Start/End: Original strand, 375 - 481
Target Start/End: Original strand, 33941892 - 33941998
Alignment:
Q  375 attgtttttgtataataaataacttgttttcataagctatcctggagagcttatgaaaatgagtttaaaacagggtatgaacatgtcatgaactgttttc 474  Q
    |||||||||||||||   ||||||||||||||||||||||| ||||||| |||||| ||| |||| ||| |||  ||||||| |||||| |  |||||||    
T  33941892 attgtttttgtataagttataacttgttttcataagctatcttggagagtttatgataataagttgaaagcagcttatgaacttgtcataagttgttttc 33941991  T
Q  475 ataagtt 481  Q
    |||||||    
T  33941992 ataagtt 33941998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 339 - 508
Target Start/End: Original strand, 787276 - 787448
Alignment:
Q  339 ataagctatttttataacacaacataaaattaagtca--ttgtttttgtataataaataacttgtttt-cataagctatcctggagagcttatgaaaatg 435  Q
    ||||||||||| |||||||||| ||||||| ||||||  ||||||||||| |||  ||||  |||||| ||||| ||||| | ||  | ||||| | ||     
T  787276 ataagctatttctataacacaagataaaataaagtcaacttgtttttgtaaaatctataatctgtttttcataaactatcttagatggtttatggagata 787375  T
Q  436 agtttaaaacagggtatgaacatgtcatgaactgttttcataagttctctcaaacagtctaacaagtgcttat 508  Q
    || | |||||||  |||| ||||||||| | |||||||||||||||||| |||||||| | ||||||||||||    
T  787376 agctgaaaacagcttatggacatgtcataagctgttttcataagttctcacaaacagtgtcacaagtgcttat 787448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 402 - 495
Target Start/End: Original strand, 33192212 - 33192304
Alignment:
Q  402 tttcataagctatcctggagagcttatgaaaatgagtttaaaacagggtatgaacatgtcatgaactgttttcataagttctctcaaacagtct 495  Q
    ||||||||||||||||||||||||||| || || || | |||||||  |||| | ||||||| ||||||||||||||||||| |||||||||||    
T  33192212 tttcataagctatcctggagagcttataaatataagctgaaaacagcttatggatatgtcataaactgttttcataagttct-tcaaacagtct 33192304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 393 - 508
Target Start/End: Original strand, 35485918 - 35486033
Alignment:
Q  393 ataacttgttttcataagctatcctggagagcttatgaaaatgagtttaaaacagggtatgaacatgtcatgaactgttttcataagttctctcaaacag 492  Q
    |||| ||||||| ||||||||||||| ||||| |||| ||||||| | |||||||  ||||||||| |||| |  || |||  |||||||||||||||||    
T  35485918 ataagttgtttttataagctatcctgaagagcctatggaaatgagctgaaaacagcttatgaacatatcataagttgctttagtaagttctctcaaacag 35486017  T
Q  493 tctaacaagtgcttat 508  Q
    ||| |||||| |||||    
T  35486018 tctcacaagttcttat 35486033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 377 - 508
Target Start/End: Original strand, 40158703 - 40158834
Alignment:
Q  377 tgtttttgtataataaataacttgttttcataagctatcctggagagcttatgaaaatgagtttaaaacagggtatgaacatgtcatgaactgttttcat 476  Q
    |||||| ||||||  ||||| ||||||||||||| ||| |||||||||||||| || | || | ||||||   ||| |||||||||| | ||||||||||    
T  40158703 tgttttcgtataagcaataagttgttttcataagttattctggagagcttatgtaattaagctgaaaacaacttataaacatgtcataagctgttttcat 40158802  T
Q  477 aagttctctcaaacagtctaacaagtgcttat 508  Q
    |||||| | ||| |||||| |||||| |||||    
T  40158803 aagttcccccaatcagtctcacaagttcttat 40158834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 43; E-Value: 0.000000000000009
Query Start/End: Original strand, 398 - 508
Target Start/End: Complemental strand, 38078474 - 38078364
Alignment:
Q  398 ttgttttcataagctatcctggagagcttatgaaaatgagtttaaaacagggtatgaacatgtcatgaactgttttcataagttctctcaaacagtctaa 497  Q
    |||||||||||||||||| ||||||||||||| ||||||| | ||||||   |||||||||| | | |||| ||| |||||| ||||||| | ||||| |    
T  38078474 ttgttttcataagctatcttggagagcttatgtaaatgagctcaaaacaacttatgaacatgcctttaactatttccataagctctctcagatagtctca 38078375  T
Q  498 caagtgcttat 508  Q
    | |||||||||    
T  38078374 ccagtgcttat 38078364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 42; E-Value: 0.00000000000004
Query Start/End: Original strand, 399 - 484
Target Start/End: Complemental strand, 35379079 - 35378994
Alignment:
Q  399 tgttttcataagctatcctggagagcttatgaaaatgagtttaaaacagggtatgaacatgtcatgaactgttttcataagttctc 484  Q
    ||||||||||||||||| |||||||||||||||||| || | ||||||   |||||||| ||||| | ||||||||||||| ||||    
T  35379079 tgttttcataagctatcttggagagcttatgaaaataagctgaaaacaacttatgaacaagtcatcagctgttttcataagctctc 35378994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 40; E-Value: 0.0000000000005
Query Start/End: Original strand, 377 - 484
Target Start/End: Original strand, 42419982 - 42420089
Alignment:
Q  377 tgtttttgtataataaataacttgttttcataagctatcctggagagcttatgaaaatgagtttaaaacagggtatgaacatgtcatgaactgttttcat 476  Q
    ||||||||||||||  ||||  | |||||||||||||||||||| |||||||| ||||||| | ||||||   |||||||||| ||| | || ||||| |    
T  42419982 tgtttttgtataatctataagctattttcataagctatcctggatagcttatggaaatgagctgaaaacaatttatgaacatgacataagcttttttcct 42420081  T
Q  477 aagttctc 484  Q
    ||||||||    
T  42420082 aagttctc 42420089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 375 - 500
Target Start/End: Original strand, 1625883 - 1626009
Alignment:
Q  375 attgtttttgtataataaataacttgttttcataagctatcctggagagcttatgaaaatgagtttaaaacagggtatgaaca-tgtcatgaactgtttt 473  Q
    |||||||| ||||||   |||| |||||||||||||||||| |||||| |||| |||||| || | ||||||   |||||||| |||||| | ||  |||    
T  1625883 attgttttcgtataagttataagttgttttcataagctatcttggagaacttacgaaaatcagctgaaaacatcttatgaacattgtcataagctacttt 1625982  T
Q  474 cataagttctctcaaacagtctaacaa 500  Q
    |||||||||||||||| ||||| ||||    
T  1625983 cataagttctctcaaatagtcttacaa 1626009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 398 - 492
Target Start/End: Original strand, 15120189 - 15120283
Alignment:
Q  398 ttgttttcataagctatcctggagagcttatgaaaatgagtttaaaacagggtatgaacatgtcatgaactgttttcataagttctctcaaacag 492  Q
    |||||||| ||||||||| |||||||||||| ||||| || |||||||||   ||||||||||||| |  ||||| |||||| |||| |||||||    
T  15120189 ttgttttcgtaagctatcatggagagcttatcaaaataagcttaaaacagctaatgaacatgtcataagttgtttccataagctctcccaaacag 15120283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 332 - 447
Target Start/End: Original strand, 43259772 - 43259889
Alignment:
Q  332 cttatggataagctatttttataacacaacataaaattaagtc--attgtttttgtataataaataacttgttttcataagctatcctggagagcttatg 429  Q
    |||| ||||||||||||| |||||||||| ||||||| |||||  || ||||||||||||| || ||  ||||||||| || |||| || ||||||||||    
T  43259772 cttacggataagctatttctataacacaagataaaataaagtcaaatagtttttgtataatcaacaagctgttttcattaggtatcttgaagagcttatg 43259871  T
Q  430 aaaatgagtttaaaacag 447  Q
     |||| || | |||||||    
T  43259872 gaaataagctaaaaacag 43259889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 399 - 463
Target Start/End: Complemental strand, 1939395 - 1939331
Alignment:
Q  399 tgttttcataagctatcctggagagcttatgaaaatgagtttaaaacagggtatgaacatgtcat 463  Q
    |||||||||||||||| |||||||||||||| |||| |||| |||||||  |||| |||||||||    
T  1939395 tgttttcataagctatactggagagcttatggaaataagttgaaaacagcttatggacatgtcat 1939331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 441 - 508
Target Start/End: Complemental strand, 5902570 - 5902503
Alignment:
Q  441 aaaacagggtatgaacatgtcatgaactgttttcataagttctctcaaacagtctaacaagtgcttat 508  Q
    |||||||  |||||||||||||| | |||||||||||||||||  |||||||||| ||||||| ||||    
T  5902570 aaaacagtttatgaacatgtcataagctgttttcataagttcttccaaacagtctcacaagtgtttat 5902503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 325 - 429
Target Start/End: Original strand, 10143103 - 10143209
Alignment:
Q  325 ataagcgcttatggataagctatttttataacacaacataaaattaagtc--attgtttttgtataataaataacttgttttcataagctatcctggaga 422  Q
    ||||| ||||||| ||||| ||||| ||||||| || |||||||||||||  | ||||||| |||||   |||| || ||||||||||||||| ||||||    
T  10143103 ataagtgcttatgtataagttatttctataacaaaagataaaattaagtcaaactgtttttatataagctataagtttttttcataagctatcatggaga 10143202  T
Q  423 gcttatg 429  Q
    | |||||    
T  10143203 gtttatg 10143209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 413 - 542
Target Start/End: Complemental strand, 43529907 - 43529776
Alignment:
Q  413 atcctggagagcttatgaaaatgagtttaaaacagggtatgaacatgtcatgaactgttttcataagttctctcaaacagtctaacaagtgcttata-ca 511  Q
    ||||| |||||||||||||||| |  | |||| ||  |||||||||| ||| | |||||||||||| ||||| |||||||| | | ||||||||||| ||    
T  43529907 atcctagagagcttatgaaaataaactgaaaatagcttatgaacatggcataagctgttttcataaattctcccaaacagtgtcagaagtgcttatacca 43529808  T
Q  512 aga-atagcctcaaataagtcaatccaaacag 542  Q
    | | |||  ||||||||||||||| |||||||    
T  43529807 atagataagctcaaataagtcaattcaaacag 43529776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.0000000005
Query Start/End: Original strand, 450 - 508
Target Start/End: Original strand, 1801726 - 1801784
Alignment:
Q  450 tatgaacatgtcatgaactgttttcataagttctctcaaacagtctaacaagtgcttat 508  Q
    |||||||||||||| | |||||||||||||||||| |||||| | | ||||||||||||    
T  1801726 tatgaacatgtcataagctgttttcataagttctcccaaacaatatcacaagtgcttat 1801784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.0000000005
Query Start/End: Original strand, 450 - 508
Target Start/End: Original strand, 4350748 - 4350806
Alignment:
Q  450 tatgaacatgtcatgaactgttttcataagttctctcaaacagtctaacaagtgcttat 508  Q
    |||||||||||||| | ||||||||||||||||||||||||| |||   ||||||||||    
T  4350748 tatgaacatgtcataagctgttttcataagttctctcaaacaatctcttaagtgcttat 4350806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.0000000005
Query Start/End: Original strand, 393 - 439
Target Start/End: Original strand, 9477953 - 9477999
Alignment:
Q  393 ataacttgttttcataagctatcctggagagcttatgaaaatgagtt 439  Q
    |||| |||||||||||||||||||||||||| |||||||||| ||||    
T  9477953 ataagttgttttcataagctatcctggagaggttatgaaaataagtt 9477999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.0000000005
Query Start/End: Original strand, 401 - 463
Target Start/End: Complemental strand, 34652097 - 34652035
Alignment:
Q  401 ttttcataagctatcctggagagcttatgaaaatgagtttaaaacagggtatgaacatgtcat 463  Q
    ||||||||||||||| ||||||||||||| |||| |||| |||||||  |||| |||||||||    
T  34652097 ttttcataagctatcttggagagcttatggaaataagttgaaaacagcttatggacatgtcat 34652035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.0000000005
Query Start/End: Original strand, 393 - 439
Target Start/End: Complemental strand, 36863694 - 36863648
Alignment:
Q  393 ataacttgttttcataagctatcctggagagcttatgaaaatgagtt 439  Q
    |||| |||||||||||||||||| |||||||||||||||||| ||||    
T  36863694 ataaattgttttcataagctatcttggagagcttatgaaaataagtt 36863648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 317 - 508
Target Start/End: Original strand, 11513824 - 11514012
Alignment:
Q  317 cttatcatataagcgcttatggataagctatttttataacacaacataaaattaagtca--ttgtttttgtataataaataacttgttttcataagctat 414  Q
    ||||||||||||| | ||||| ||||| ||||   | |||| || ||||||| ||||||  |||||||  |||||   |||| |||||||||||||||||    
T  11513824 cttatcatataagggtttatgtataagttatt---acaacaaaagataaaataaagtcaaattgttttcatataagctataagttgttttcataagctat 11513920  T
Q  415 cctggagagcttatgaaaatgagtttaaaacagggtatgaacatgtcatgaactgttttcataagttctctcaaacagtctaacaagtgcttat 508  Q
    | |||||| ||| || |||| || | |||| ||  |||   |||| ||||  ||||||||||||| ||||| ||||||||| ||||||||||||    
T  11513921 catggagaacttttggaaataagctgaaaatagcttataggcatgccatg--ctgttttcataagctctctaaaacagtctcacaagtgcttat 11514012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 424 - 493
Target Start/End: Original strand, 13220465 - 13220534
Alignment:
Q  424 cttatgaaaatgagtttaaaacagggtatgaacatgtcatgaactgttttcataagttctctcaaacagt 493  Q
    |||||| |||| ||||||||||||  |||||||| ||||| |  |||||| |||||||||||||||||||    
T  13220465 cttatgcaaataagtttaaaacagcttatgaacaagtcataagttgtttttataagttctctcaaacagt 13220534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 399 - 508
Target Start/End: Original strand, 16867746 - 16867854
Alignment:
Q  399 tgttttcataagctatcctggagagcttatgaaaatgagtttaaaacagggtatgaacatgtcatgaactgttttcataagttctctcaaacagtctaac 498  Q
    |||||||| |||||||| ||||||||||||| |||| |||| ||||||   |||||| ||||||| ||||   ||| |||| ||||| ||||||| | ||    
T  16867746 tgttttcacaagctatcttggagagcttatggaaataagttgaaaacaacttatgaatatgtcataaact-acttcttaagctctctaaaacagtgtcac 16867844  T
Q  499 aagtgcttat 508  Q
    ||||||||||    
T  16867845 aagtgcttat 16867854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 402 - 495
Target Start/End: Complemental strand, 32106859 - 32106766
Alignment:
Q  402 tttcataagctatcctggagagcttatgaaaatgagtttaaaacagggtatgaacatgtcatgaactgttttcataagttctctcaaacagtct 495  Q
    ||||||||| ||||||| |||||||||||| || | || |||||||  ||   | ||||||| | |||||||||||||||||| ||||||||||    
T  32106859 tttcataagttatcctgaagagcttatgaacataatttgaaaacagcttacagatatgtcataagctgttttcataagttctcacaaacagtct 32106766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 400 - 489
Target Start/End: Original strand, 33256748 - 33256837
Alignment:
Q  400 gttttcataagctatcctggagagcttatgaaaatgagtttaaaacagggtatgaacatgtcatgaactgttttcataagttctctcaaa 489  Q
    |||||||||||| |||||| ||| | ||||||||| || | | |||||  |||||||||||||| | ||||||||||||| |||| ||||    
T  33256748 gttttcataagccatcctgaagaccgtatgaaaataagctgagaacagtttatgaacatgtcataagctgttttcataagctctcccaaa 33256837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 414 - 491
Target Start/End: Original strand, 38809348 - 38809425
Alignment:
Q  414 tcctggagagcttatgaaaatgagtttaaaacagggtatgaacatgtcatgaactgttttcataagttctctcaaaca 491  Q
    |||||||||||||||| |||| |||| |||||||  ||| |||||||||| | ||| ||| |||||||||| ||||||    
T  38809348 tcctggagagcttatggaaataagttgaaaacagattattaacatgtcataagctggtttaataagttctcccaaaca 38809425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 393 - 434
Target Start/End: Original strand, 39983343 - 39983384
Alignment:
Q  393 ataacttgttttcataagctatcctggagagcttatgaaaat 434  Q
    |||| |||||||||||||||||||||||||||| ||||||||    
T  39983343 ataagttgttttcataagctatcctggagagctaatgaaaat 39983384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 334 - 447
Target Start/End: Original strand, 4090289 - 4090404
Alignment:
Q  334 tatggataagctatttttataacacaacataaaattaagtc--attgtttttgtataataaataacttgttttcataagctatcctggagagcttatgaa 431  Q
    |||| |||||||||||  ||||||||| ||||||| |||||  |||||||  |||||||  |||| |||||| ||||||||||||  ||||||| ||| |    
T  4090289 tatgaataagctatttccataacacaagataaaataaagtcaaattgtttcggtataatctataagttgtttacataagctatccctgagagctcatgga 4090388  T
Q  432 aatgagtttaaaacag 447  Q
    |||  ||| |||||||    
T  4090389 aatatgttgaaaacag 4090404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 399 - 439
Target Start/End: Complemental strand, 10884584 - 10884544
Alignment:
Q  399 tgttttcataagctatcctggagagcttatgaaaatgagtt 439  Q
    ||||||||||||||||||| |||||||||||||||| ||||    
T  10884584 tgttttcataagctatcctagagagcttatgaaaataagtt 10884544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 393 - 500
Target Start/End: Original strand, 20952356 - 20952464
Alignment:
Q  393 ataacttgttttcataagctatcctggagagcttatgaaaatgagtttaaaacagggtatgaacat-gtcatgaactgttttcataagttctctcaaaca 491  Q
    |||| ||||||| || ||||||  |||||| ||||||||||| |||| |||| ||   ||||| || | ||| ||||||||||||||||||||| ||| |    
T  20952356 ataagttgtttttattagctatattggagaacttatgaaaataagttgaaaaaagttaatgaaaattggcataaactgttttcataagttctcttaaata 20952455  T
Q  492 gtctaacaa 500  Q
    |||||||||    
T  20952456 gtctaacaa 20952464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 398 - 434
Target Start/End: Original strand, 24097814 - 24097850
Alignment:
Q  398 ttgttttcataagctatcctggagagcttatgaaaat 434  Q
    ||||||||||||| |||||||||||||||||||||||    
T  24097814 ttgttttcataagttatcctggagagcttatgaaaat 24097850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 417 - 542
Target Start/End: Complemental strand, 28677704 - 28677577
Alignment:
Q  417 tggagagcttatgaaaatgagtttaaaacagggtatgaacatgtcatgaactgttttcataagttctctcaaacagtctaacaagtgcttatacaag--a 514  Q
    ||||||||||||| |||| ||   ||||||   |||||| ||||||| | |||||||||||||||||| |||||||||| |  ||| ||||| ||||  |    
T  28677704 tggagagcttatggaaataagccgaaaacaacttatgaaaatgtcataagctgttttcataagttctcccaaacagtcttagcagtacttatgcaagtaa 28677605  T
Q  515 atagcctcaaataagtcaatccaaacag 542  Q
    |||  |||||| || |||||||||||||    
T  28677604 ataagctcaaaaaaatcaatccaaacag 28677577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 323 - 492
Target Start/End: Original strand, 28933753 - 28933923
Alignment:
Q  323 atataagcgcttatggataagctatttttataacacaacataaaattaagtca--ttgtttttgtataataaataacttgttttcataagctatcctgga 420  Q
    ||||||| ||| ||| ||||||||||| ||||||| || ||||||| || |||  || ||||  | |||   |||| |||||||||||||||||||| ||    
T  28933753 atataagtgctcatgtataagctatttatataacaaaagataaaatcaaatcaaattattttcatttaagttataaattgttttcataagctatcctaga 28933852  T
Q  421 gagcttatgaaaatgagtttaaaacagggtatgaacatgtcatgaactgttttcataagttctctcaaacag 492  Q
    ||||| ||  |||| |||| |||||| | |||||||||| ||| |  |||||||||||| |||  |||||||    
T  28933853 gagctgatagaaataagttgaaaaca-gctatgaacatgccataagttgttttcataagctcttccaaacag 28933923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 424 - 484
Target Start/End: Original strand, 31096333 - 31096393
Alignment:
Q  424 cttatgaaaatgagtttaaaacagggtatgaacatgtcatgaactgttttcataagttctc 484  Q
    ||||||||||| ||||||||||||  |||| |||||| || ||||||||||||||| ||||    
T  31096333 cttatgaaaataagtttaaaacagcttatggacatgttattaactgttttcataagctctc 31096393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 401 - 493
Target Start/End: Original strand, 41817177 - 41817269
Alignment:
Q  401 ttttcataagctatcctggagagcttatgaaaatgagtttaaaacagggtatgaacatgtcatgaactgttttcataagttctctcaaacagt 493  Q
    ||||||||| ||||||||||||||||||| |||| || | ||||||   ||| |||||||||| |  ||||||||||| |||||  |||||||    
T  41817177 ttttcataaactatcctggagagcttatggaaataagctgaaaacaaattatcaacatgtcataagatgttttcataaattctcctaaacagt 41817269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 403 - 475
Target Start/End: Complemental strand, 44438898 - 44438826
Alignment:
Q  403 ttcataagctatcctggagagcttatgaaaatgagtttaaaacagggtatgaacatgtcatgaactgttttca 475  Q
    |||||||| ||||||||||| ||| || |||| || | |||||||| |||||||||||||| | |||||||||    
T  44438898 ttcataagttatcctggagatcttgtggaaataagctgaaaacaggttatgaacatgtcataagctgttttca 44438826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 402 - 500
Target Start/End: Original strand, 750680 - 750779
Alignment:
Q  402 tttcataagctatcctggagagcttatgaaaatgagtttaaaacagggtatgaac-atgtcatgaactgttttcataagttctctcaaacagtctaacaa 500  Q
    |||||||||||||| |||||| |||||| |||| || | |||||||  ||||||| ||||||| | || ||||||||||||||  |||||| ||| ||||    
T  750680 tttcataagctatcttggagaacttatgcaaataagctcaaaacagcttatgaacaatgtcattagctcttttcataagttcttgcaaacactctcacaa 750779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 402 - 493
Target Start/End: Complemental strand, 1494506 - 1494415
Alignment:
Q  402 tttcataagctatcctggagagcttatgaaaatgagtttaaaacagggtatgaacatgtcatgaactgttttcataagttctctcaaacagt 493  Q
    |||||| ||| ||| ||| ||| || ||||||| || | |||||||  |||| ||||||||| | ||||||||||||| |||||||||||||    
T  1494506 tttcattagccatcatggcgaggttttgaaaataagctaaaaacagtttatggacatgtcataagctgttttcataagctctctcaaacagt 1494415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 399 - 434
Target Start/End: Original strand, 3049981 - 3050016
Alignment:
Q  399 tgttttcataagctatcctggagagcttatgaaaat 434  Q
    ||||||||||||||||| ||||||||||||||||||    
T  3049981 tgttttcataagctatcatggagagcttatgaaaat 3050016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 401 - 432
Target Start/End: Complemental strand, 9530789 - 9530758
Alignment:
Q  401 ttttcataagctatcctggagagcttatgaaa 432  Q
    ||||||||||||||||||||||||||||||||    
T  9530789 ttttcataagctatcctggagagcttatgaaa 9530758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 406 - 477
Target Start/End: Original strand, 25790140 - 25790211
Alignment:
Q  406 ataagctatcctggagagcttatgaaaatgagtttaaaacagggtatgaacatgtcatgaactgttttcata 477  Q
    |||| |||||||||||||||||||||||| |||| |||||||  || |||||||| || | |||||| ||||    
T  25790140 ataatctatcctggagagcttatgaaaataagttcaaaacagcttaggaacatgtaataagctgtttccata 25790211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 467 - 510
Target Start/End: Original strand, 32837398 - 32837441
Alignment:
Q  467 ctgttttcataagttctctcaaacagtctaacaagtgcttatac 510  Q
    |||||||||||||||||| |||||||||| |||||| |||||||    
T  32837398 ctgttttcataagttctcccaaacagtctcacaagtacttatac 32837441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 375 - 434
Target Start/End: Original strand, 40279180 - 40279239
Alignment:
Q  375 attgtttttgtataataaataacttgttttcataagctatcctggagagcttatgaaaat 434  Q
    |||||||| |||||| | |||| |||||||||||||||||  |||||| |||||||||||    
T  40279180 attgttttggtataagatataagttgttttcataagctatgttggagaacttatgaaaat 40279239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 521 - 551
Target Start/End: Original strand, 4508312 - 4508342
Alignment:
Q  521 tcaaataagtcaatccaaacaggtcgtaagt 551  Q
    |||||||||||||||||||||||||||||||    
T  4508312 tcaaataagtcaatccaaacaggtcgtaagt 4508342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 317 - 375
Target Start/End: Complemental strand, 17952848 - 17952790
Alignment:
Q  317 cttatcatataagcgcttatggataagctatttttataacacaacataaaattaagtca 375  Q
    ||||||||||||| ||||||  ||||||||||| ||||||| || ||||||| ||||||    
T  17952848 cttatcatataagagcttatatataagctatttctataacaaaagataaaataaagtca 17952790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 393 - 463
Target Start/End: Original strand, 33942151 - 33942221
Alignment:
Q  393 ataacttgttttcataagctatcctggagagcttatgaaaatgagtttaaaacagggtatgaacatgtcat 463  Q
    |||| |||||||||||||| ||| | ||||||| |||||||| || | |||||||  ||||||||||||||    
T  33942151 ataagttgttttcataagccatcatagagagctaatgaaaattagctgaaaacagcttatgaacatgtcat 33942221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 393 - 447
Target Start/End: Original strand, 40279408 - 40279462
Alignment:
Q  393 ataacttgttttcataagctatcctggagagcttatgaaaatgagtttaaaacag 447  Q
    |||| |||||||||||||||||  |||||| ||||||||||| |||| |||||||    
T  40279408 ataagttgttttcataagctatattggagaacttatgaaaataagttgaaaacag 40279462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 332 - 433
Target Start/End: Complemental strand, 43299535 - 43299430
Alignment:
Q  332 cttatggataagctatttttataacacaacataaaattaagtcat--tgtttttgtataa-taaataacttgttttcataagct-atcctggagagctta 427  Q
    |||||| || |||||||| ||||||| || ||||||| ||||||   ||||||||||||| |  |||| ||||||||||||||| ||||||| ||||| |    
T  43299535 cttatgaattagctatttatataacagaagataaaataaagtcaaactgtttttgtataaatctataagttgttttcataagctaatcctggtgagctca 43299436  T
Q  428 tgaaaa 433  Q
    ||||||    
T  43299435 tgaaaa 43299430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 403 - 484
Target Start/End: Original strand, 43570425 - 43570506
Alignment:
Q  403 ttcataagctatcctggagagcttatgaaaatgagtttaaaacagggtatgaac-atgtcatgaactgttttcataagttctc 484  Q
    ||||||||| |||||||| ||||||||||||| ||  ||||| ||  ||||||| ||||||| | ||||||||||||||||||    
T  43570425 ttcataagccatcctggaaagcttatgaaaataag-ctaaaaaagcttatgaacaatgtcataagctgttttcataagttctc 43570506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 401 - 478
Target Start/End: Original strand, 680512 - 680589
Alignment:
Q  401 ttttcataagctatcctggagagcttatgaaaatgagtttaaaacagggtatgaacatgtcatgaactgttttcataa 478  Q
    ||||||||||||||| || ||| ||| ||||||| || | |||||||  ||| |||||||||| | ||||||||||||    
T  680512 ttttcataagctatcttgaagaacttgtgaaaataagctgaaaacagtttataaacatgtcataagctgttttcataa 680589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 455 - 508
Target Start/End: Original strand, 1318299 - 1318352
Alignment:
Q  455 acatgtcatgaactgttttcataagttctctcaaacagtctaacaagtgcttat 508  Q
    ||||||||| |  |||||||||||| |||| |||||||||| ||||||||||||    
T  1318299 acatgtcataagatgttttcataagctctcacaaacagtctcacaagtgcttat 1318352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 406 - 483
Target Start/End: Original strand, 1647250 - 1647327
Alignment:
Q  406 ataagctatcctggagagcttatgaaaatgagtttaaaacagggtatgaacatgtcatgaactgttttcataagttct 483  Q
    |||||||||  | ||||||||||| |||| || | |||||||  ||||| |||||||| | |||||||||||||||||    
T  1647250 ataagctattatagagagcttatggaaataagctgaaaacagcttatgagcatgtcataagctgttttcataagttct 1647327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 318 - 375
Target Start/End: Original strand, 3102617 - 3102674
Alignment:
Q  318 ttatcatataagcgcttatggataagctatttttataacacaacataaaattaagtca 375  Q
    |||||||||||  ||||||| |||||||||||||||| || || ||||||| ||||||    
T  3102617 ttatcatataactgcttatgtataagctatttttatagcaaaatataaaataaagtca 3102674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 399 - 484
Target Start/End: Original strand, 9556246 - 9556331
Alignment:
Q  399 tgttttcataagctatcctggagagcttatgaaaatgagtttaaaacagggtatgaacatgtcatgaactgttttcataagttctc 484  Q
    ||||||||||||||||||| || ||||||||||||| |||| ||| |    |||| ||||||||| |  |||||||||||| ||||    
T  9556246 tgttttcataagctatcctagaaagcttatgaaaataagttgaaatctacttatggacatgtcattagttgttttcataagctctc 9556331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 318 - 355
Target Start/End: Complemental strand, 26484230 - 26484193
Alignment:
Q  318 ttatcatataagcgcttatggataagctatttttataa 355  Q
    |||||||||||| ||||||||||||||||||| |||||    
T  26484230 ttatcatataagtgcttatggataagctatttctataa 26484193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 324 - 414
Target Start/End: Complemental strand, 33931710 - 33931618
Alignment:
Q  324 tataagcgcttatggataagctatttttataacacaacataaaattaagtc--attgtttttgtataataaataacttgttttcataagctat 414  Q
    ||||||||||| || ||||||||||| ||| |||| | ||||||| | |||  |||||||||||||||   ||||  ||||||||||||||||    
T  33931710 tataagcgcttgtgaataagctatttctattacactagataaaataaggtcagattgtttttgtataagctataagctgttttcataagctat 33931618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 399 - 484
Target Start/End: Complemental strand, 35378595 - 35378510
Alignment:
Q  399 tgttttcataagctatcctggagagcttatgaaaatgagtttaaaacagggtatgaacatgtcatgaactgttttcataagttctc 484  Q
    ||||||| ||||| ||| |||| ||||||||||||| || | |||| |   |||||||| ||||| | ||||||||||||||||||    
T  35378595 tgttttcgtaagcaatcttggatagcttatgaaaataagctgaaaataacttatgaacaagtcatcagctgttttcataagttctc 35378510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 398 - 471
Target Start/End: Original strand, 43173228 - 43173301
Alignment:
Q  398 ttgttttcataagctatcctggagagcttatgaaaatgagtttaaaacagggtatgaacatgtcatgaactgtt 471  Q
    ||||||| ||| |||||| |||||| |||||| |||| ||||||||||||  | || ||||||||| |||||||    
T  43173228 ttgtttttataggctatcttggagatcttatggaaataagtttaaaacagcatgtggacatgtcataaactgtt 43173301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 339 - 500
Target Start/End: Complemental strand, 43279652 - 43279488
Alignment:
Q  339 ataagctatttttataacacaacataaaattaagt--cattgtttttgtataataaataacttgttttcataagctatcctggagagcttatgaaaatga 436  Q
    |||||||||||||||| || || ||||||| | ||   |||||||||||||  |  |||| ||||||| |||||||||  |||||| ||| ||||||| |    
T  43279652 ataagctatttttatatcaaaagataaaataatgtgaaattgtttttgtatgct--ataagttgtttttataagctatattggagaacttgtgaaaataa 43279555  T
Q  437 gtttaaaacagggtatgaaca-tgtcatgaactgttttcataagttctct--caaacagtctaacaa 500  Q
    ||| |||| ||  |||||| | |||||| | |||||||||||| ||||||  |||||||||| ||||    
T  43279554 gttgaaaaaagcttatgaaaattgtcataagctgttttcataaattctctcccaaacagtctcacaa 43279488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 318 - 375
Target Start/End: Complemental strand, 43530257 - 43530200
Alignment:
Q  318 ttatcatataagcgcttatggataagctatttttataacacaacataaaattaagtca 375  Q
    ||||||||||||| |||||| ||||||||||| ||||  |||| ||||||| ||||||    
T  43530257 ttatcatataagcacttatgaataagctatttctataggacaagataaaataaagtca 43530200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 393 - 434
Target Start/End: Complemental strand, 43985072 - 43985031
Alignment:
Q  393 ataacttgttttcataagctatcctggagagcttatgaaaat 434  Q
    |||| |||||||||||||||||| || |||||||||||||||    
T  43985072 ataagttgttttcataagctatcttgaagagcttatgaaaat 43985031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 50; Significance: 6e-19; HSPs: 36)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 50; E-Value: 6e-19
Query Start/End: Original strand, 339 - 505
Target Start/End: Original strand, 33887775 - 33887943
Alignment:
Q  339 ataagctatttttataacacaacataaaattaagtcat--tgtttttgtataataaataacttgttttcataagctatcctggagagcttatgaaaatga 436  Q
    ||||| |||||||||||||||| ||||||  || |||   |||||| ||||||| |||||  |||||||||||||||||||| |  ||||||| |||| |    
T  33887775 ataagatatttttataacacaagataaaacaaactcaaactgttttagtataatcaataaactgttttcataagctatcctgaaatgcttatggaaataa 33887874  T
Q  437 gtttaaaacagggtatgaacatgtcatgaactgttttcataagttctctcaaacagtctaacaagtgct 505  Q
    ||| ||||||   | |||||||||||| | || ||||||||| |||||||||||| | | |||||||||    
T  33887875 gttgaaaacaacttgtgaacatgtcataagctattttcataaattctctcaaacaatgtcacaagtgct 33887943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 375 - 500
Target Start/End: Complemental strand, 20368267 - 20368142
Alignment:
Q  375 attgtttttgtataataaataacttgttttcataagctatcctggagagcttatgaaaatgagtttaaaacagggtatgaacatgtcatgaactgttttc 474  Q
    ||||||||||||| |   |||| ||||||||||||||| || |||||| ||||||||||| |||| |||  ||  |||||||||||||| |  |||||||    
T  20368267 attgtttttgtatgagttataagttgttttcataagctttcttggagaacttatgaaaataagttgaaactagcttatgaacatgtcataagttgttttc 20368168  T
Q  475 ataagttctctcaaacagtctaacaa 500  Q
    |||||||||| |||| ||||| ||||    
T  20368167 ataagttctcccaaatagtcttacaa 20368142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 45; E-Value: 6e-16
Query Start/End: Original strand, 399 - 483
Target Start/End: Original strand, 31624097 - 31624181
Alignment:
Q  399 tgttttcataagctatcctggagagcttatgaaaatgagtttaaaacagggtatgaacatgtcatgaactgttttcataagttct 483  Q
    |||||||||| |||||| ||||||  |||||||||| |||| |||||||  |||||||||||||| | |||||||||||||||||    
T  31624097 tgttttcataggctatcttggagaaattatgaaaataagttgaaaacagcttatgaacatgtcataagctgttttcataagttct 31624181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 342 - 434
Target Start/End: Complemental strand, 31776396 - 31776303
Alignment:
Q  342 agctatttttataacacaacataaaattaagtca--ttgtttttgtataataaataacttgttttcataagctatcctggagagcttatgaaaat 434  Q
    |||||||| |||||||||| ||||||| ||||||  ||||||||||||||| ||||| |||||||||||||||||  ||||||||| ||| ||||    
T  31776396 agctatttctataacacaa-ataaaataaagtcaaattgtttttgtataattaataagttgttttcataagctataatggagagctaatggaaat 31776303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 42; E-Value: 0.00000000000004
Query Start/End: Original strand, 317 - 489
Target Start/End: Complemental strand, 9093704 - 9093528
Alignment:
Q  317 cttatcat-ataagcgcttatggataagctatttttataacacaacataaaattaagt--cattgtttttgtataataaataacttgttttcataagcta 413  Q
    |||||||| ||||||||||||||||||||||||| |||| || || ||||||| ||||   |||||||| ||||||   ||||  ||||||||||||||     
T  9093704 cttatcatgataagcgcttatggataagctatttctatatcaaaagataaaataaagttaaattgttttcgtataagctataagctgttttcataagctg 9093605  T
Q  414 tcctggagagcttatgaaaatgagtttaaaacagggtatgaac-atgtcatgaactgttttcataagttctctcaaa 489  Q
    || | |||| |||| |||||| || | |||||||| ||| ||| ||||||| | || |||||||||| |||| ||||    
T  9093604 tcttagagaacttaagaaaataagctgaaaacaggttattaacaatgtcataagctattttcataagctctcacaaa 9093528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 376 - 434
Target Start/End: Complemental strand, 31812099 - 31812041
Alignment:
Q  376 ttgtttttgtataataaataacttgttttcataagctatcctggagagcttatgaaaat 434  Q
    ||||| |||||||| | |||| |||||||||||||||||| ||||||||||||||||||    
T  31812099 ttgttattgtataagatataagttgttttcataagctatcttggagagcttatgaaaat 31812041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 38; E-Value: 0.000000000009
Query Start/End: Original strand, 325 - 374
Target Start/End: Complemental strand, 3171570 - 3171521
Alignment:
Q  325 ataagcgcttatggataagctatttttataacacaacataaaattaagtc 374  Q
    ||||||||||||| ||||||||||||||||||| || |||||||||||||    
T  3171570 ataagcgcttatgcataagctatttttataacaaaagataaaattaagtc 3171521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 38; E-Value: 0.000000000009
Query Start/End: Original strand, 398 - 495
Target Start/End: Complemental strand, 8035212 - 8035115
Alignment:
Q  398 ttgttttcataagctatcctggagagcttatgaaaatgagtttaaaacagggtatgaacatgtcatgaactgttttcataagttctctcaaacagtct 495  Q
    ||||||||||||| |||||| || |||||| |||||| |||| |||||| | ||||| |||||||| |  ||||||| ||||||||| |||| |||||    
T  8035212 ttgttttcataagttatcctagaaagcttacgaaaataagttgaaaacaagttatgaccatgtcataagttgttttcttaagttctcccaaatagtct 8035115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 38; E-Value: 0.000000000009
Query Start/End: Original strand, 399 - 504
Target Start/End: Complemental strand, 31686426 - 31686321
Alignment:
Q  399 tgttttcataagctatcctggagagcttatgaaaatgagtttaaaacagggtatgaacatgtcatgaactgttttcataagttctctcaaacagtctaac 498  Q
    ||||||||||||||||||||||||||||| | | || || | |||||||  ||| ||| |||||| |  |||||| ||||||||||||||||| | | ||    
T  31686426 tgttttcataagctatcctggagagcttacggacataagctgaaaacagattataaacttgtcataagttgttttgataagttctctcaaacaatgtcac 31686327  T
Q  499 aagtgc 504  Q
    ||||||    
T  31686326 aagtgc 31686321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 38; E-Value: 0.000000000009
Query Start/End: Original strand, 399 - 508
Target Start/End: Complemental strand, 32171446 - 32171337
Alignment:
Q  399 tgttttcataagctatcctggagagcttatgaaaatgagtttaaaacagggtatgaacatgtcatgaactgttttcataagttctctcaaacagtctaac 498  Q
    ||||||||| || ||||||||| |||||||| |||| || | |||| ||  | || || |||||| | ||||||||||||| |||||||||||||||  |    
T  32171446 tgttttcattagttatcctggatagcttatggaaataagctgaaaatagcttctggacttgtcataagctgttttcataagctctctcaaacagtctcgc 32171347  T
Q  499 aagtgcttat 508  Q
    ||||||||||    
T  32171346 aagtgcttat 32171337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 38; E-Value: 0.000000000009
Query Start/End: Original strand, 399 - 500
Target Start/End: Original strand, 33089513 - 33089614
Alignment:
Q  399 tgttttcataagctatcctggagagcttatgaaaatgagtttaaaacagggtatgaacatgtcatgaactgttttcataagttctctcaaacagtctaac 498  Q
    ||||||||||||||||| ||| |||| ||||||||| ||  |||||||   ||| |||||||| | | ||||||||||||||||||| ||| ||||| ||    
T  33089513 tgttttcataagctatcttggggagcctatgaaaataagcgtaaaacaacttataaacatgtcctaagctgttttcataagttctctgaaatagtctcac 33089612  T
Q  499 aa 500  Q
    ||    
T  33089613 aa 33089614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 325 - 434
Target Start/End: Original strand, 4006645 - 4006756
Alignment:
Q  325 ataagcgcttatggataagctatttttataacacaacataaaattaagtca--ttgtttttgtataataaataacttgttttcataagctatcctggaga 422  Q
    ||||| ||||||| ||||| ||||| ||||||| |  ||||||| ||||||  |||||||| |||||   |||| |||||||||||||||||||  ||||    
T  4006645 ataagtgcttatgcataagatatttctataacaaatgataaaataaagtcaaattgtttttatataagctataagttgttttcataagctatccctgaga 4006744  T
Q  423 gcttatgaaaat 434  Q
    | ||||||||||    
T  4006745 ggttatgaaaat 4006756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 316 - 429
Target Start/End: Original strand, 4248880 - 4248995
Alignment:
Q  316 gcttatcatataagcgcttatggataagctatttttataacacaacataaaattaagtc--attgtttttgtataataaataacttgttttcataagcta 413  Q
    |||| ||||||||| ||||||  |||||||||||  |||||| || ||||||| |||||  |||| ||||||||||  |||||  ||||||| |||||||    
T  4248880 gcttgtcatataagtgcttatatataagctatttcaataacaaaagataaaataaagtcaaattgattttgtataaacaataaggtgttttcctaagcta 4248979  T
Q  414 tcctggagagcttatg 429  Q
    ||  ||||||||||||    
T  4248980 tctcggagagcttatg 4248995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 399 - 463
Target Start/End: Original strand, 6647394 - 6647458
Alignment:
Q  399 tgttttcataagctatcctggagagcttatgaaaatgagtttaaaacagggtatgaacatgtcat 463  Q
    ||||||||||||||||| | |||||||||||||||| |||| ||||||   ||||||||||||||    
T  6647394 tgttttcataagctatcttagagagcttatgaaaataagttgaaaacatcttatgaacatgtcat 6647458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 378 - 446
Target Start/End: Complemental strand, 7945967 - 7945900
Alignment:
Q  378 gtttttgtataataaataacttgttttcataagctatcctggagagcttatgaaaatgagtttaaaaca 446  Q
    |||||||||||||  ||||| |||||||||| |||||||||||||||||||| |||| || ||||||||    
T  7945967 gtttttgtataatctataacctgttttcata-gctatcctggagagcttatggaaataagcttaaaaca 7945900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 318 - 370
Target Start/End: Complemental strand, 31668831 - 31668779
Alignment:
Q  318 ttatcatataagcgcttatggataagctatttttataacacaacataaaatta 370  Q
    |||||||||||| ||||||| ||||||||||| ||||||| ||||||||||||    
T  31668831 ttatcatataagtgcttatgtataagctatttctataacaaaacataaaatta 31668779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 398 - 491
Target Start/End: Original strand, 103437 - 103530
Alignment:
Q  398 ttgttttcataagctatcctggagagcttatgaaaatgagtttaaaacagggtatgaacatgtcatgaactgttttcataagttctctcaaaca 491  Q
    ||||||||||||||||||||||||| || |||||||  || |  ||||||  |||||| ||||||| | |||||||  ||||||||||| ||||    
T  103437 ttgttttcataagctatcctggagatctaatgaaaacaagctgtaaacagtttatgaatatgtcataagctgtttttgtaagttctctcgaaca 103530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 399 - 508
Target Start/End: Original strand, 34403862 - 34403971
Alignment:
Q  399 tgttttcataagctatcctggagagcttatgaaaatgagtttaaaacagggtatgaacatgtcatgaactgttttcataagttctctcaaacagtctaac 498  Q
    |||||||||||||| | ||  |||||||||| |||| || | ||||||   |||||||||||||| |  ||||||| ||| |||||  ||||||||||||    
T  34403862 tgttttcataagctgtactaaagagcttatggaaataaggtgaaaacaccttatgaacatgtcataagttgttttcttaacttctcctaaacagtctaac 34403961  T
Q  499 aagtgcttat 508  Q
    ||||| ||||    
T  34403962 aagtgtttat 34403971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 401 - 493
Target Start/End: Original strand, 2263201 - 2263293
Alignment:
Q  401 ttttcataagctatcctggagagcttatgaaaatgagtttaaaacagggtatgaacatgtcatgaactgttttcataagttctctcaaacagt 493  Q
    |||| |||||||||| | |||| |||||  |||  |||| |||||| | ||||||||||||||    ||||||||||||||||||||||||||    
T  2263201 tttttataagctatcttcgagaccttatagaaagaagttgaaaacacgctatgaacatgtcatatgttgttttcataagttctctcaaacagt 2263293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 339 - 495
Target Start/End: Original strand, 2735014 - 2735173
Alignment:
Q  339 ataagctatttttataacacaacataaaattaagtca--ttgtttttgtataataaataacttgttttcataagctatcctggagagcttatgaaaatga 436  Q
    ||||||||| | ||||||| || ||||||| |||| |  || ||||||||||||  ||||  ||||||||||||| ||| || | | ||||||||||| |    
T  2735014 ataagctatgtctataacaaaagataaaataaagttaaattatttttgtataatctataagctgttttcataagcaatcttgaacaacttatgaaaataa 2735113  T
Q  437 gtttaaaacagggtatgaaca-tgtcatgaactgttttcataagttctctcaaacagtct 495  Q
    |   |||||||  |||||| | |||||| | | ||||||||||||| |||||||||||||    
T  2735114 gccgaaaacagcttatgaaaaatgtcataagccgttttcataagttatctcaaacagtct 2735173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 399 - 479
Target Start/End: Complemental strand, 28641812 - 28641732
Alignment:
Q  399 tgttttcataagctatcctggagagcttatgaaaatgagtttaaaacagggtatgaacatgtcatgaactgttttcataag 479  Q
    ||||||||  |||||| ||| ||||||||||||||| || | |||||||  ||||||||||| || | |||||||||||||    
T  28641812 tgttttcaatagctattctgcagagcttatgaaaataagctaaaaacagcttatgaacatgttataagctgttttcataag 28641732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 398 - 510
Target Start/End: Complemental strand, 32386627 - 32386515
Alignment:
Q  398 ttgttttcataagctatcctggagagcttatgaaaatgagtttaaaacagggtatgaacatgtcatgaactgttttcataagttctctcaaacagtctaa 497  Q
    |||||||||| || ||||||||||||||||||||||| || | |||||| | | || |||||| || |  | ||| |||||| ||| |||||| |||| |    
T  32386627 ttgttttcattagttatcctggagagcttatgaaaataagctgaaaacaagttgtggacatgttataagatatttccataagctctttcaaacggtctca 32386528  T
Q  498 caagtgcttatac 510  Q
    ||||| |||||||    
T  32386527 caagtacttatac 32386515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 399 - 510
Target Start/End: Original strand, 769146 - 769256
Alignment:
Q  399 tgttttcataagctatcctggagagcttatgaaaatgagtttaaaacagggtatgaacatgtcatgaactgttttcataagttctctcaaacagtctaac 498  Q
    ||||||||||||||| | ||  || |||| |||| | |||| |||||||  |||||||||||||| |  |||||||||||||||   |||||||||| ||    
T  769146 tgttttcataagctaacttgagga-cttaagaaagtaagttgaaaacagcttatgaacatgtcataagatgttttcataagttcatccaaacagtctcac 769244  T
Q  499 aagtgcttatac 510  Q
    ||||| ||||||    
T  769245 aagtgtttatac 769256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 322 - 373
Target Start/End: Original strand, 32861356 - 32861407
Alignment:
Q  322 catataagcgcttatggataagctatttttataacacaacataaaattaagt 373  Q
    |||||||| ||||||||||| ||||||| ||||||| || ||||||||||||    
T  32861356 catataagtgcttatggatacgctatttctataacaaaagataaaattaagt 32861407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 425 - 483
Target Start/End: Original strand, 1575928 - 1575986
Alignment:
Q  425 ttatgaaaatgagtttaaaacagggtatgaacatgtcatgaactgttttcataagttct 483  Q
    |||||||||| |||| |||||||  |||||||||||||| |  ||||||||||||||||    
T  1575928 ttatgaaaataagttaaaaacagcttatgaacatgtcataagttgttttcataagttct 1575986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 399 - 465
Target Start/End: Original strand, 4246417 - 4246483
Alignment:
Q  399 tgttttcataagctatcctggagagcttatgaaaatgagtttaaaacagggtatgaacatgtcatga 465  Q
    ||||||||||||||||  |||||||| ||| ||||| |||| |||||||  |||| |||||||||||    
T  4246417 tgttttcataagctattatggagagcatataaaaataagttgaaaacagcttatggacatgtcatga 4246483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 399 - 493
Target Start/End: Complemental strand, 4324516 - 4324423
Alignment:
Q  399 tgttttcataagctatcctggagagcttatgaaaatgagtttaaaacagggtatgaacatgtcatgaactgttttcataagttctctcaaacagt 493  Q
    |||||||||||||||||||||| | |||||| |||| || | ||| |||  || | ||||||||| |  |||||| |||||||||||||||||||    
T  4324516 tgttttcataagctatcctggaaaacttatgcaaataagctaaaagcagtttagggacatgtcataagttgtttt-ataagttctctcaaacagt 4324423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 401 - 463
Target Start/End: Original strand, 4420652 - 4420714
Alignment:
Q  401 ttttcataagctatcctggagagcttatgaaaatgagtttaaaacagggtatgaacatgtcat 463  Q
    ||||| ||||||||| ||||||||||||| |||| || | |||||||  ||||||||||||||    
T  4420652 ttttcctaagctatcttggagagcttatggaaataagctgaaaacagcttatgaacatgtcat 4420714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 450 - 500
Target Start/End: Complemental strand, 9203002 - 9202952
Alignment:
Q  450 tatgaacatgtcatgaactgttttcataagttctctcaaacagtctaacaa 500  Q
    |||||||||| |||||  | |||||||||||||||||||||||||| ||||    
T  9203002 tatgaacatgccatgagttattttcataagttctctcaaacagtctcacaa 9202952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 322 - 376
Target Start/End: Original strand, 33259744 - 33259798
Alignment:
Q  322 catataagcgcttatggataagctatttttataacacaacataaaattaagtcat 376  Q
    |||||||| ||||||| ||||||||||||||||||| || ||||| | |||||||    
T  33259744 catataagtgcttatgtataagctatttttataacaaaagataaattgaagtcat 33259798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 312 - 417
Target Start/End: Complemental strand, 33826884 - 33826780
Alignment:
Q  312 aagtgcttatcatataagcgcttatggataagctatttttataacacaacataaaattaagtc--attgtttttgtataataaataacttgttttcataa 409  Q
    |||||||||||||||||||||| |   ||||||||||| ||||||| || || |||| |||||  | ||||||||||||||| ||||   ||||| ||||    
T  33826884 aagtgcttatcatataagcgctaa---ataagctatttatataacagaagattaaataaagtcaaactgtttttgtataatatataagcagtttttataa 33826788  T
Q  410 gctatcct 417  Q
    | ||||||    
T  33826787 gttatcct 33826780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 318 - 375
Target Start/End: Complemental strand, 3217336 - 3217279
Alignment:
Q  318 ttatcatataagcgcttatggataagctatttttataacacaacataaaattaagtca 375  Q
    |||||||||||| ||||||| ||||||||||||| ||| | || ||||||| ||||||    
T  3217336 ttatcatataagtgcttatgtataagctatttttgtaagagaagataaaataaagtca 3217279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 323 - 429
Target Start/End: Original strand, 6654544 - 6654652
Alignment:
Q  323 atataagcgcttatggataagctatttttataacacaacataaaattaagtc--attgtttttgtataataaataacttgttttcataagctatcctgga 420  Q
    ||||||| ||||||| ||||| ||||| ||||||| |  |||||||||||||  ||||||||||| |||    |||  |||||| ||| |||||| ||||    
T  6654544 atataagggcttatgtataagttatttctataacaaataataaaattaagtcaaattgtttttgtttaaactttaagctgttttaatatgctatcttgga 6654643  T
Q  421 gagcttatg 429  Q
    |||||||||    
T  6654644 gagcttatg 6654652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 459 - 508
Target Start/End: Complemental strand, 10353764 - 10353715
Alignment:
Q  459 gtcatgaactgttttcataagttctctcaaacagtctaacaagtgcttat 508  Q
    ||||| ||||||||||| ||| |||| |||||||||| ||||||||||||    
T  10353764 gtcataaactgttttcacaagctctcccaaacagtctcacaagtgcttat 10353715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 399 - 504
Target Start/End: Original strand, 33116591 - 33116696
Alignment:
Q  399 tgttttcataagctatcctggagagcttatgaaaatgagtttaaaacagggtatgaacatgtcatgaactgttttcataagttctctcaaacagtctaac 498  Q
    |||||||||||||| ||||    |||||||| |||| |  |||||| ||  |||| ||||||||| |  ||||||||||| ||| |||||||||||| ||    
T  33116591 tgttttcataagctttcctaacaagcttatggaaataaacttaaaagagtttatgcacatgtcataagttgttttcataaattccctcaaacagtctcac 33116690  T
Q  499 aagtgc 504  Q
    ||||||    
T  33116691 aagtgc 33116696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 419 - 508
Target Start/End: Complemental strand, 35070510 - 35070421
Alignment:
Q  419 gagagcttatgaaaatgagtttaaaacagggtatgaacatgtcatgaactgttttcataagttctctcaaacagtctaacaagtgcttat 508  Q
    |||||||||||||||| |||| |||||||  ||||| | || | | | ||||||||||  |||||| |||||||||  ||||||||||||    
T  35070510 gagagcttatgaaaataagttgaaaacagcttatgatcttgccttaagctgttttcatttgttctcccaaacagtcccacaagtgcttat 35070421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 47; Significance: 4e-17; HSPs: 40)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 47; E-Value: 4e-17
Query Start/End: Original strand, 312 - 429
Target Start/End: Complemental strand, 912801 - 912681
Alignment:
Q  312 aagtgcttatcatataagcgcttatggataagctatttttataacacaacataaaattaagtc---attgtttttgtataataaataacttgttttcata 408  Q
    |||||||||||||||||||| ||||| ||||| ||||| |||||||||| ||||||| |||||   ||||||||  |||||  ||||| ||||||| |||    
T  912801 aagtgcttatcatataagcgtttatgaataagttatttctataacacaatataaaataaagtcaaaattgttttcatataagcaataagttgtttttata 912702  T
Q  409 agctatcctggagagcttatg 429  Q
    | ||||| |||| ||||||||    
T  912701 aactatcttggaaagcttatg 912681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 47; E-Value: 4e-17
Query Start/End: Original strand, 339 - 486
Target Start/End: Original strand, 17368621 - 17368770
Alignment:
Q  339 ataagctatttttataacacaacataaaattaagtcat--tgtttttgtataataaataacttgttttcataagctatcctggagagcttatgaaaatga 436  Q
    |||||||||||  ||||||||  || |||| ||||||   ||||||||| ||||  |||| |||||||||||||||||| ||||||| ||||| |||| |    
T  17368621 ataagctatttcaataacacagtattaaatgaagtcaaactgtttttgtgtaatctataagttgttttcataagctatcttggagaggttatggaaataa 17368720  T
Q  437 gtttaaaacagggtatgaacatgtcatgaactgttttcataagttctctc 486  Q
    | | ||||| |  |||||||||||||| |  |||||||||||||||||||    
T  17368721 gctgaaaactgcatatgaacatgtcataagttgttttcataagttctctc 17368770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 47; E-Value: 4e-17
Query Start/End: Original strand, 312 - 489
Target Start/End: Original strand, 39105381 - 39105562
Alignment:
Q  312 aagtgcttatcat-ataagcgcttatggataagctatttttataacacaacataaaattaagtca--ttgtttttgtataataaataacttgttttcata 408  Q
    ||||||||||||| ||||||||||||| ||||||||||| |||| |  || || |||| |||| |  ||||||| ||||||   ||||  ||||||||||    
T  39105381 aagtgcttatcatgataagcgcttatgtataagctatttctatagctaaatatgaaatgaagttaaattgttttcgtataagctataatctgttttcata 39105480  T
Q  409 agctatcctggagagcttatgaaaatgagtttaaaacagggtatgaac-atgtcatgaactgttttcataagttctctcaaa 489  Q
    ||||||| |||||| ||||||||||| || | |||| ||  ||||||| ||||||| | |||||||||||| ||||| ||||    
T  39105481 agctatcttggagaacttatgaaaataagctaaaaatagcttatgaacaatgtcataagctgttttcataaattctcccaaa 39105562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 399 - 508
Target Start/End: Complemental strand, 17258946 - 17258837
Alignment:
Q  399 tgttttcataagctatcctggagagcttatgaaaatgagtttaaaacagggtatgaacatgtcatgaactgttttcataagttctctcaaacagtctaac 498  Q
    ||||||||||| |||||||| ||||||||||||||| || | |||||||  |||||||||||||| | || |||||||| |||||| |||| | | | ||    
T  17258946 tgttttcataaactatcctgaagagcttatgaaaataagctgaaaacagcttatgaacatgtcataagctattttcataggttctcccaaagaatgtcac 17258847  T
Q  499 aagtgcttat 508  Q
    ||||||||||    
T  17258846 aagtgcttat 17258837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 312 - 432
Target Start/End: Complemental strand, 18543349 - 18543226
Alignment:
Q  312 aagtgcttatcatataagcgcttatggataagctatttttataacacaacataaaattaagtca---ttgtttttgtataataaataacttgttttcata 408  Q
    |||| ||||||||||| | ||||| | | ||||||||| ||| ||| || || |||| ||||||   |||||||| ||||| | |||| |||||||||||    
T  18543349 aagtacttatcatataggggcttacgtaaaagctatttgtatcacaaaatattaaataaagtcaaacttgtttttatataagatataagttgttttcata 18543250  T
Q  409 agctatcctggagagcttatgaaa 432  Q
    ||||||||||||||||||||||||    
T  18543249 agctatcctggagagcttatgaaa 18543226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 45; E-Value: 6e-16
Query Start/End: Original strand, 333 - 483
Target Start/End: Complemental strand, 18857531 - 18857377
Alignment:
Q  333 ttatggataagctatttttataacacaacataaaattaagtca--ttgtttttgtataataaataacttgttttcataagctatcctggagagct--tat 428  Q
    ||||| |||||||||||  ||||||||  ||||||| ||||||  |||||||| ||||||  ||||  |||||||||||||| || ||||||| |  |||    
T  18857531 ttatgaataagctatttcaataacacacgataaaataaagtcaaattgtttttctataatctataagctgttttcataagctgtcttggagaggtgttat 18857432  T
Q  429 gaaaatgagtttaaaacagggtatgaacatgtcatgaactgttttcataagttct 483  Q
    |||| | |||| |||||||  |||||||||||||| | |||||||||||| ||||    
T  18857431 gaaattaagttaaaaacagcttatgaacatgtcattagctgttttcataaattct 18857377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 45; E-Value: 6e-16
Query Start/End: Original strand, 398 - 502
Target Start/End: Complemental strand, 37611279 - 37611175
Alignment:
Q  398 ttgttttcataagctatcctggagagcttatgaaaatgagtttaaaacagggtatgaacatgtcatgaactgttttcataagttctctcaaacagtctaa 497  Q
    |||||||||||||||||| ||||||||||||| |||| |  | |||||||  |||||||||||||  |  |||||||||||| ||||||||||| ||| |    
T  37611279 ttgttttcataagctatcttggagagcttatggaaataacctgaaaacagcttatgaacatgtcacaagttgttttcataagctctctcaaacaatctca 37611180  T
Q  498 caagt 502  Q
    |||||    
T  37611179 caagt 37611175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 45; E-Value: 6e-16
Query Start/End: Original strand, 398 - 502
Target Start/End: Complemental strand, 37788009 - 37787905
Alignment:
Q  398 ttgttttcataagctatcctggagagcttatgaaaatgagtttaaaacagggtatgaacatgtcatgaactgttttcataagttctctcaaacagtctaa 497  Q
    |||||||||||||||||| ||||||||||||| |||| |  | |||||||  |||||||||||||  |  |||||||||||| ||||||||||| ||| |    
T  37788009 ttgttttcataagctatcttggagagcttatggaaataacctgaaaacagcttatgaacatgtcacaagttgttttcataagctctctcaaacaatctca 37787910  T
Q  498 caagt 502  Q
    |||||    
T  37787909 caagt 37787905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 399 - 486
Target Start/End: Complemental strand, 13604912 - 13604825
Alignment:
Q  399 tgttttcataagctatcctggagagcttatgaaaatgagtttaaaacagggtatgaacatgtcatgaactgttttcataagttctctc 486  Q
    |||||||||||| |||| || ||||||||||||||| |||| ||||||  ||||| ||||||||| | ||||||||||||| ||||||    
T  13604912 tgttttcataagttatcttgaagagcttatgaaaataagttgaaaacaacgtatggacatgtcataagctgttttcataagctctctc 13604825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 43; E-Value: 0.000000000000009
Query Start/End: Original strand, 393 - 507
Target Start/End: Original strand, 2568659 - 2568773
Alignment:
Q  393 ataacttgttttcataagctatcctggagagcttatgaaaatgagtttaaaacagggtatgaacatgtcatgaactgttttcataagttctctcaaacag 492  Q
    |||| |||||||||||||||||| ||||||||| |||||||| || | |||| |   |||||| ||||||| | |||||||||||||||||   ||||||    
T  2568659 ataagttgttttcataagctatcatggagagctaatgaaaataagctaaaaataacttatgaatatgtcataagctgttttcataagttcttctaaacag 2568758  T
Q  493 tctaacaagtgctta 507  Q
    |||  ||||||||||    
T  2568759 tctctcaagtgctta 2568773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 399 - 479
Target Start/End: Complemental strand, 21768260 - 21768180
Alignment:
Q  399 tgttttcataagctatcctggagagcttatgaaaatgagtttaaaacagggtatgaacatgtcatgaactgttttcataag 479  Q
    |||||||||||| |||| || |||||||| |||||| |||| ||||||| ||||| ||||||||| | |||||||||||||    
T  21768260 tgttttcataagttatcttgaagagcttacgaaaataagttgaaaacagcgtatggacatgtcataagctgttttcataag 21768180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 40; E-Value: 0.0000000000005
Query Start/End: Original strand, 393 - 508
Target Start/End: Complemental strand, 12460070 - 12459955
Alignment:
Q  393 ataacttgttttcataagctatcctggagagcttatgaaaatgagtttaaaacagggtatgaacatgtcatgaactgttttcataagttctctcaaacag 492  Q
    |||| |||| |||| |||||||| || ||||||||||||||| ||   ||||||   |||||||||||||| |  |||||||||| |||||| |||||||    
T  12460070 ataagttgtcttcacaagctatcttgcagagcttatgaaaataagccaaaaacaacatatgaacatgtcataagttgttttcataggttctcccaaacag 12459971  T
Q  493 tctaacaagtgcttat 508  Q
    ||| ||| ||||||||    
T  12459970 tctcacaggtgcttat 12459955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 310 - 368
Target Start/End: Original strand, 11684339 - 11684397
Alignment:
Q  310 agaagtgcttatcatataagcgcttatggataagctatttttataacacaacataaaat 368  Q
    |||||||||||||||||||| ||| ||| ||||||||||||||||||| || |||||||    
T  11684339 agaagtgcttatcatataagtgctaatgtataagctatttttataacaaaatataaaat 11684397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 450 - 508
Target Start/End: Complemental strand, 25720429 - 25720371
Alignment:
Q  450 tatgaacatgtcatgaactgttttcataagttctctcaaacagtctaacaagtgcttat 508  Q
    ||||||||||||||||| |||||| ||||| ||||||| ||||||| ||||||||||||    
T  25720429 tatgaacatgtcatgaattgtttttataagctctctcagacagtctcacaagtgcttat 25720371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 38; E-Value: 0.000000000009
Query Start/End: Original strand, 403 - 508
Target Start/End: Original strand, 4619718 - 4619823
Alignment:
Q  403 ttcataagctatcctggagagcttatgaaaatgagtttaaaacagggtatgaacatgtcatgaactgttttcataagttctctcaaacagtctaacaagt 502  Q
    ||||||||||||| |||||| |||||| |||| || | ||| |||  |||||||||||||| |  |||||||||||| |||| |||||||| |  |||||    
T  4619718 ttcataagctatcatggagaacttatggaaataaggtgaaaccagcttatgaacatgtcattagttgttttcataagctctcccaaacagtgttgcaagt 4619817  T
Q  503 gcttat 508  Q
    ||||||    
T  4619818 gcttat 4619823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 325 - 457
Target Start/End: Complemental strand, 4014563 - 4014429
Alignment:
Q  325 ataagcgcttatggataagctatttttataacacaacataaaattaagtca--ttgtttttgtataataaataacttgttttcataagctatcctggaga 422  Q
    |||||||| |||| ||||||||||| |||| || || ||||||| |||| |  ||||||||| | ||   ||||  ||||||||||||||||| ||||||    
T  4014563 ataagcgcctatgtataagctatttctatagcaaaagataaaataaagttagattgtttttggaaaaatgataagctgttttcataagctatcttggaga 4014464  T
Q  423 gcttatgaaaatgagtttaaaacagggtatgaaca 457  Q
     ||||||||||| || | |||||||  ||||||||    
T  4014463 acttatgaaaataagctgaaaacagcttatgaaca 4014429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 375 - 502
Target Start/End: Complemental strand, 6587194 - 6587067
Alignment:
Q  375 attgtttttgtataataaataacttgttttcataagctatcctggagagcttatgaaaatgagtttaaaacagggtatgaacatgtcatgaactgttttc 474  Q
    |||||||| ||||||   |||| |||||||||||||||||  |||||| ||| ||||||| || |  ||||||  ||||||| |||||| | |||||||     
T  6587194 attgttttcgtataagctataagttgttttcataagctatagtggagaacttgtgaaaataagctgtaaacagcttatgaacctgtcataagctgttttt 6587095  T
Q  475 ataagttctctcaaacagtctaacaagt 502  Q
     ||||||||  |||||||| ||||||||    
T  6587094 ttaagttcttccaaacagtttaacaagt 6587067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 312 - 375
Target Start/End: Complemental strand, 20982287 - 20982224
Alignment:
Q  312 aagtgcttatcatataagcgcttatggataagctatttttataacacaacataaaattaagtca 375  Q
    |||||||||||||||||| ||||||| ||||||||||| ||||||| |  ||||||| ||||||    
T  20982287 aagtgcttatcatataagtgcttatgtataagctatttctataacaaaggataaaataaagtca 20982224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 393 - 500
Target Start/End: Complemental strand, 37526268 - 37526161
Alignment:
Q  393 ataacttgttttcataagctatcctggagagcttatgaaaatgagtttaaaacagggtatgaacatgtcatgaactgttttcataagttctctcaaacag 492  Q
    |||| ||||||||||||| | | |||||||||||||| |||| || | |||||||  ||| ||||||||||    ||| |||||||| ||||||||||||    
T  37526268 ataagttgttttcataagttgttctggagagcttatggaaataagctgaaaacagcttattaacatgtcataggttgtattcataagctctctcaaacag 37526169  T
Q  493 tctaacaa 500  Q
    ||| ||||    
T  37526168 tctcacaa 37526161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 393 - 500
Target Start/End: Complemental strand, 37588429 - 37588322
Alignment:
Q  393 ataacttgttttcataagctatcctggagagcttatgaaaatgagtttaaaacagggtatgaacatgtcatgaactgttttcataagttctctcaaacag 492  Q
    |||| ||||||||||||| ||| |||||||||||||| |||| || | |||||||  ||| ||||| ||||    ||| |||||||| ||||||||||||    
T  37588429 ataagttgttttcataagttattctggagagcttatggaaataagctgaaaacagcttattaacatttcataggttgtattcataagctctctcaaacag 37588330  T
Q  493 tctaacaa 500  Q
    ||| ||||    
T  37588329 tctcacaa 37588322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.0000000005
Query Start/End: Original strand, 454 - 508
Target Start/End: Complemental strand, 499739 - 499685
Alignment:
Q  454 aacatgtcatgaactgttttcataagttctctcaaacagtctaacaagtgcttat 508  Q
    |||||||||| | |||||||||||||||||| ||||||| |||||| ||||||||    
T  499739 aacatgtcataagctgttttcataagttctcccaaacagcctaacaggtgcttat 499685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.0000000005
Query Start/End: Original strand, 399 - 489
Target Start/End: Original strand, 11707062 - 11707152
Alignment:
Q  399 tgttttcataagctatcctggagagcttatgaaaatgagtttaaaacagggtatgaacatgtcatgaactgttttcataagttctctcaaa 489  Q
    ||||||||||||||||| || ||||||| ||||||| || | ||||||   ||| |||||||||| | || |||| |||||||||||||||    
T  11707062 tgttttcataagctatcttgtagagcttttgaaaataagctgaaaacaacttataaacatgtcataatctattttgataagttctctcaaa 11707152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 316 - 446
Target Start/End: Original strand, 31694440 - 31694572
Alignment:
Q  316 gcttatcatataagcgcttatggataagctatttttataacacaacataaaattaagtc--attgtttttgtataataaataacttgttttcataagcta 413  Q
    |||||||||||||| ||||||| ||||||||| | ||||||| |||||||| | |||||  | ||||||| || ||   |||| ||||| || ||||||     
T  31694440 gcttatcatataagtgcttatgaataagctatgtctataacaaaacataaactaaagtcaaactgtttttatacaaactataagttgttctcttaagctc 31694539  T
Q  414 tcctggagagcttatgaaaatgagtttaaaaca 446  Q
     | || ||||||||||||||| |||| ||||||    
T  31694540 acttgtagagcttatgaaaataagttgaaaaca 31694572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 399 - 508
Target Start/End: Complemental strand, 33533602 - 33533494
Alignment:
Q  399 tgttttcataagctatcctggagagcttatgaaaatgagtttaaaacagggtatgaacatgtcatgaactgttttcataagttctctcaaacagtctaac 498  Q
    |||||||| |||||||| ||||||||||||| |||| |||| ||||||   |||||| ||||||| ||||   ||| |||| ||||| ||||||| | ||    
T  33533602 tgttttcacaagctatcttggagagcttatggaaataagttgaaaacaacttatgaatatgtcataaact-acttcttaagctctctaaaacagtgtcac 33533504  T
Q  499 aagtgcttat 508  Q
    ||||||||||    
T  33533503 aagtgcttat 33533494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 401 - 505
Target Start/End: Complemental strand, 10125779 - 10125675
Alignment:
Q  401 ttttcataagctatcctggagagcttatgaaaatgagtttaaaacagggtatgaacatgtcatgaactgttttcataagttctctcaaacagtctaacaa 500  Q
    |||||||||| || | |||||||||||||||||| || | ||||||   ||| |||||||||| |  ||||| |||||||||||||| ||| | | ||||    
T  10125779 ttttcataagttaccatggagagcttatgaaaataagctgaaaacaccttatcaacatgtcataagttgtttacataagttctctcagacaatgtcacaa 10125680  T
Q  501 gtgct 505  Q
    |||||    
T  10125679 gtgct 10125675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 393 - 500
Target Start/End: Original strand, 29925842 - 29925950
Alignment:
Q  393 ataacttgttttcataagctatcctggagagcttatgaaaatgagtttaaaacagggtatgaaca-tgtcatgaactgttttcataagttctctcaaaca 491  Q
    |||| |||||| ||||||||||  |||||| ||||||||||| |||| |||| |    ||||||| |||||| | |||||||||||||||||| |||||     
T  29925842 ataagttgtttacataagctatattggagaacttatgaaaataagttgaaaaaaacacatgaacattgtcataagctgttttcataagttctcccaaacg 29925941  T
Q  492 gtctaacaa 500  Q
    |||| ||||    
T  29925942 gtctcacaa 29925950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 399 - 499
Target Start/End: Original strand, 36638754 - 36638854
Alignment:
Q  399 tgttttcataagctatcctggagagcttatgaaaatgagtttaaaacagggtatgaacatgtcatgaactgttttcataagttctctcaaacagtctaac 498  Q
    |||||||||||| |||||| ||||||||||| |||| || | |||| ||  ||||||||||||||  || ||||||||||  | || | |||||||||||    
T  36638754 tgttttcataagttatcctagagagcttatggaaataagctgaaaaaagcttatgaacatgtcatacacagttttcataaactttccccaacagtctaac 36638853  T
Q  499 a 499  Q
    |    
T  36638854 a 36638854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 362 - 434
Target Start/End: Complemental strand, 10272533 - 10272459
Alignment:
Q  362 ataaaattaagtca--ttgtttttgtataataaataacttgttttcataagctatcctggagagcttatgaaaat 434  Q
    ||||||||||||||  ||||||| ||||||   |||| |||||||||||||| ||| ||||||| ||||||||||    
T  10272533 ataaaattaagtcaaattgttttcgtataagctataagttgttttcataagccatcttggagagtttatgaaaat 10272459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 317 - 368
Target Start/End: Original strand, 10391276 - 10391327
Alignment:
Q  317 cttatcatataagcgcttatggataagctatttttataacacaacataaaat 368  Q
    ||||||||||||| ||||| | ||||||||||||||||||| || |||||||    
T  10391276 cttatcatataagtgcttacgtataagctatttttataacaaaagataaaat 10391327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 399 - 434
Target Start/End: Original strand, 40731476 - 40731511
Alignment:
Q  399 tgttttcataagctatcctggagagcttatgaaaat 434  Q
    ||||||||||||||||||| ||||||||||||||||    
T  40731476 tgttttcataagctatccttgagagcttatgaaaat 40731511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 312 - 446
Target Start/End: Original strand, 12425488 - 12425625
Alignment:
Q  312 aagtgcttatcat-ataagcgcttatggataagctatttttataacacaacataaaattaagtca--ttgtttttgtataataaataacttgttttcata 408  Q
    ||||| ||||||| |||| |||||||| |||| |||||| ||||  | || ||||||| |||| |  ||||||| ||||||   ||||  |||||||| |    
T  12425488 aagtgtttatcatgataaacgcttatgtataaactatttatatagtaaaagataaaataaagttaaattgttttcgtataagctataagctgttttcaca 12425587  T
Q  409 agctatcctggagagcttatgaaaatgagtttaaaaca 446  Q
    ||||||| |||||| ||||||||||| |||| ||||||    
T  12425588 agctatcttggagaacttatgaaaataagttgaaaaca 12425625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 393 - 463
Target Start/End: Complemental strand, 14674969 - 14674899
Alignment:
Q  393 ataacttgttttcataagctatcctggagagcttatgaaaatgagtttaaaacagggtatgaacatgtcat 463  Q
    |||| ||||| ||||||| ||||||| ||| |||||||||||  |||||||||||  ||| ||||||||||    
T  14674969 ataagttgttctcataagatatcctgtagaacttatgaaaatatgtttaaaacagtttataaacatgtcat 14674899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 393 - 463
Target Start/End: Complemental strand, 15309062 - 15308992
Alignment:
Q  393 ataacttgttttcataagctatcctggagagcttatgaaaatgagtttaaaacagggtatgaacatgtcat 463  Q
    |||| |||||||||| ||||||| | |||| ||||||||||| || | |||||||| ||||||||| ||||    
T  15309062 ataagttgttttcattagctatcattgagatcttatgaaaataagatgaaaacaggttatgaacatatcat 15308992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 312 - 374
Target Start/End: Original strand, 19177397 - 19177459
Alignment:
Q  312 aagtgcttatcatataagcgcttatggataagctatttttataacacaacataaaattaagtc 374  Q
    ||||| |||||||||||| ||||||| |||| |||||| || |||| || |||||||||||||    
T  19177397 aagtgattatcatataagtgcttatgtataaactatttctacaacagaagataaaattaagtc 19177459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 399 - 429
Target Start/End: Complemental strand, 38047918 - 38047888
Alignment:
Q  399 tgttttcataagctatcctggagagcttatg 429  Q
    |||||||||||||||||||||||||||||||    
T  38047918 tgttttcataagctatcctggagagcttatg 38047888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 398 - 428
Target Start/End: Complemental strand, 40205138 - 40205108
Alignment:
Q  398 ttgttttcataagctatcctggagagcttat 428  Q
    |||||||||||||||||||||||||||||||    
T  40205138 ttgttttcataagctatcctggagagcttat 40205108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 317 - 374
Target Start/End: Original strand, 1961915 - 1961972
Alignment:
Q  317 cttatcatataagcgcttatggataagctatttttataacacaacataaaattaagtc 374  Q
    ||||||||||||| || |||  ||||||||||||||||||| ||  ||||||||||||    
T  1961915 cttatcatataagtgcctatatataagctatttttataacaaaatgtaaaattaagtc 1961972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 399 - 491
Target Start/End: Original strand, 28777000 - 28777093
Alignment:
Q  399 tgttttcataagctatcctggagagcttatgaaaatgagtttaaaacagggtatgaac-atgtcatgaactgttttcataagttctctcaaaca 491  Q
    ||||||||||||||||| |||||| || |||||||| || | |||| ||  | ||||| ||||||| |||| |||| |||||||||| ||||||    
T  28777000 tgttttcataagctatcttggagaactaatgaaaataagataaaaatagtttttgaacaatgtcataaactatttttataagttctcacaaaca 28777093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 399 - 472
Target Start/End: Complemental strand, 41957514 - 41957441
Alignment:
Q  399 tgttttcataagctatcctggagagcttatgaaaatgagtttaaaacagggtatgaacatgtcatgaactgttt 472  Q
    ||||||||||||||||||| |||| ||||||||||| || | ||||||   |||| ||||||||| | ||||||    
T  41957514 tgttttcataagctatccttgagaacttatgaaaataagatgaaaacaacttatggacatgtcataagctgttt 41957441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 325 - 431
Target Start/End: Original strand, 42646846 - 42646954
Alignment:
Q  325 ataagcgcttatggataagctatttttataacacaacataaaattaagt--cattgtttttgtataataaataacttgttttcataagctatcctggaga 422  Q
    |||||||  |||| ||||| ||||||||||||| |  ||||||||||||   ||||||||||| |||   ||||  ||||||||||| | ||| ||||||    
T  42646846 ataagcgggtatgtataagatatttttataacaaaggataaaattaagttaaattgtttttgtttaagctataaggtgttttcataaacgatcttggaga 42646945  T
Q  423 gcttatgaa 431  Q
    |||||||||    
T  42646946 gcttatgaa 42646954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 46; Significance: 1e-16; HSPs: 41)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 326 - 508
Target Start/End: Original strand, 28165023 - 28165207
Alignment:
Q  326 taagcgcttatggataagctatttttataacacaacataaaattaagtca--ttgtttttgtataataaataacttgttttcataagctatcctggagag 423  Q
    |||| ||||||| ||||| | ||| ||||||| || ||||||| ||||||  |||||||  |||||   ||||  ||| || |||||||||| |||||||    
T  28165023 taagtgcttatgtataagttctttctataacaaaagataaaatgaagtcaaattgttttaatataagctataaactgtctttataagctatcatggagag 28165122  T
Q  424 cttatgaaaatgagtttaaaacagggtatgaacatgtcatgaactgttttcataagttctctcaaacagtctaacaagtgcttat 508  Q
    |||||| |||| |||| |||||||  |||||||| ||| ||| |||||| |||||| | ||||||| ||||| | ||||||||||    
T  28165123 cttatggaaataagttgaaaacagcttatgaacaggtcttgagctgtttccataagctatctcaaagagtctcataagtgcttat 28165207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 42; E-Value: 0.00000000000004
Query Start/End: Original strand, 325 - 479
Target Start/End: Original strand, 12110291 - 12110447
Alignment:
Q  325 ataagcgcttatggataagctatttttataacacaacataaaattaagtca--ttgtttttgtataataaataacttgttttcataagctatcctggaga 422  Q
    |||||| |||||| |||| |||||| ||| |||||| ||||||| ||||||  ||||||| ||||||   ||||  ||||||||||||||||| || |||    
T  12110291 ataagcacttatgaataacctatttctattacacaagataaaataaagtcaaattgttttggtataagctataagctgttttcataagctatcttgaaga 12110390  T
Q  423 gcttatgaaaatgagtttaaaacagggtatgaacatgtcatgaactgttttcataag 479  Q
     ||||||||||| |  | |||||||  | |||||||||||| |  ||||||||||||    
T  12110391 acttatgaaaataatctaaaaacagtttgtgaacatgtcataagttgttttcataag 12110447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 42; E-Value: 0.00000000000004
Query Start/End: Original strand, 317 - 434
Target Start/End: Original strand, 47941243 - 47941365
Alignment:
Q  317 cttatcatataagcgcttatggataagctatttttataacacaac---ataaaattaagtc--attgtttttgtataataaataacttgttttcataagc 411  Q
    ||||||||||||||||||| | ||||||||||| |||||||||||   | ||||| | |||  ||| |||| |||||||  ||||  |||||||||||||    
T  47941243 cttatcatataagcgcttaagaataagctatttctataacacaacaagacaaaataaggtcaaattattttagtataatctataaactgttttcataagc 47941342  T
Q  412 tatcctggagagcttatgaaaat 434  Q
    ||||| |||||| ||||||||||    
T  47941343 tatcccggagagtttatgaaaat 47941365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 316 - 429
Target Start/End: Complemental strand, 39169563 - 39169449
Alignment:
Q  316 gcttatcatataagcgcttatggataagctatttttataacacaacataaaattaagtcat--tgtttttgtataataaataacttgttttcataagcta 413  Q
    ||||||||||| |||||||| | |||||||||||  || |||||| | ||||| ||||||   ||||||||||||||  ||||  |||||||||||||||    
T  39169563 gcttatcatatgagcgcttacgaataagctatttccattacacaagaaaaaatgaagtcagactgtttttgtataatctataaactgttttcataagcta 39169464  T
Q  414 tcctggagagcttatg 429  Q
    |||| |||||||||||    
T  39169463 tcct-gagagcttatg 39169449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 40; E-Value: 0.0000000000005
Query Start/End: Original strand, 402 - 501
Target Start/End: Complemental strand, 27626183 - 27626084
Alignment:
Q  402 tttcataagctatcctggagagcttatgaaaatgagtttaaaacagggtatgaacatgtcatgaactgttttcataagttctctcaaacagtctaacaag 501  Q
    |||| ||||||||| || |||||||||| |||| ||||||||||||  |||| ||||||||| | |||||| |||||| | ||||||||| ||| |||||    
T  27626183 tttcctaagctatcatgaagagcttatggaaataagtttaaaacagtttatggacatgtcataagctgtttccataagctttctcaaacaatctcacaag 27626084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 399 - 500
Target Start/End: Original strand, 20526453 - 20526555
Alignment:
Q  399 tgttttcataagctatcctggagagcttatgaaaatgagtttaaaacagggtatgaaca-tgtcatgaactgttttcataagttctctcaaacagtctaa 497  Q
    ||||||||||||||||  |||||| || |||||||| || | |||||||  || ||| | ||| || ||||||||||||||||||||||||||||||| |    
T  20526453 tgttttcataagctattttggagaactaatgaaaataagctaaaaacagcttacgaaaaatgtgataaactgttttcataagttctctcaaacagtctca 20526552  T
Q  498 caa 500  Q
    |||    
T  20526553 caa 20526555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 398 - 508
Target Start/End: Complemental strand, 25670650 - 25670540
Alignment:
Q  398 ttgttttcataagctatcctggagagcttatgaaaatgagtttaaaacagggtatgaacatgtcatgaactgttttcataagttctctcaaacagtctaa 497  Q
    ||||||| ||||  |||| |||||||||| ||||||| || | ||||||   ||| |||||||||| |  |||||||||||||| ||||||||||||| |    
T  25670650 ttgtttttataacatatcttggagagcttgtgaaaataagctgaaaacaatttattaacatgtcataagttgttttcataagttttctcaaacagtctca 25670551  T
Q  498 caagtgcttat 508  Q
    |||| ||||||    
T  25670550 caagagcttat 25670540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 331 - 434
Target Start/End: Original strand, 46945846 - 46945951
Alignment:
Q  331 gcttatggataagctatttttataacacaacataaaattaagtc--attgtttttgtataataaataacttgttttcataagctatcctggagagcttat 428  Q
    ||||||| ||||||||||| |||||||||| ||||||| || ||  ||||||  ||||||||  |||| |||||||| |||||||||| | |||||||||    
T  46945846 gcttatgaataagctatttgtataacacaagataaaatcaaatcaaattgttcatgtataatctataatttgttttcttaagctatcccgaagagcttat 46945945  T
Q  429 gaaaat 434  Q
    | ||||    
T  46945946 ggaaat 46945951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 38; E-Value: 0.000000000009
Query Start/End: Original strand, 274 - 434
Target Start/End: Original strand, 48131231 - 48131390
Alignment:
Q  274 tttggataaataacttaatttgcaacttacatcataagaagtgcttatcatataagcgcttatggataagctatttttataacacaacataaaattaagt 373  Q
    |||||||| | |||||| |||||| |||||| ||||||   ||||||||||||||||||||||| || ||||| |||| ||| | ||||| |||| ||||    
T  48131231 tttggatacacaacttattttgcagcttacagcataag---tgcttatcatataagcgcttatgtatcagctagttttgtaataaaacatgaaataaagt 48131327  T
Q  374 c--attgtttttgtataataaataacttgttttcataagctatcctggagagcttatgaaaat 434  Q
    |  | |||||| ||||||    |||  | ||||||| | ||||| ||||||||||||||||||    
T  48131328 caaaatgttttagtataacctttaagctattttcatgatctatcatggagagcttatgaaaat 48131390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 399 - 463
Target Start/End: Original strand, 529382 - 529446
Alignment:
Q  399 tgttttcataagctatcctggagagcttatgaaaatgagtttaaaacagggtatgaacatgtcat 463  Q
    ||||||||||||||||| ||||||||||||||||||  ||| |||||||  ||||||| ||||||    
T  529382 tgttttcataagctatcttggagagcttatgaaaatatgttgaaaacagcttatgaacttgtcat 529446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 398 - 542
Target Start/End: Complemental strand, 28691899 - 28691754
Alignment:
Q  398 ttgttttcataagctatcctggagagcttatgaaaatgagtttaaaacagggtatgaacatgtcatgaactgttttcataagttctctcaaacagtctaa 497  Q
    ||||||||||||||||||||||||| ||||||||||| |  | | ||||   |||| ||| ||||| | ||||||||||||| |||| | |||||||| |    
T  28691899 ttgttttcataagctatcctggagatcttatgaaaataaactgataacaatttatggacaagtcataagctgttttcataagatctc-cgaacagtctca 28691801  T
Q  498 caagtgcttatacaag--aatagcctcaaataagtcaatccaaacag 542  Q
    ||| |||||||   ||   |||  |||||||||||||||||||||||    
T  28691800 caaatgcttatgttagcagataaactcaaataagtcaatccaaacag 28691754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 377 - 440
Target Start/End: Complemental strand, 39542385 - 39542322
Alignment:
Q  377 tgtttttgtataataaataacttgttttcataagctatcctggagagcttatgaaaatgagttt 440  Q
    ||||| ||||||| | |||| |||||| |||||| ||||||||||||||||||||||| |||||    
T  39542385 tgtttatgtataagatataagttgtttccataagttatcctggagagcttatgaaaataagttt 39542322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 375 - 446
Target Start/End: Original strand, 44821942 - 44822013
Alignment:
Q  375 attgtttttgtataataaataacttgttttcataagctatcctggagagcttatgaaaatgagtttaaaaca 446  Q
    |||||||||||||||   ||||  |||||||||||||||| ||||||| ||||||||||| |||| ||||||    
T  44821942 attgtttttgtataagttataagctgttttcataagctattctggagaacttatgaaaataagttgaaaaca 44822013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 35; E-Value: 0.0000000005
Query Start/End: Original strand, 379 - 513
Target Start/End: Original strand, 752956 - 753090
Alignment:
Q  379 tttttgtataataaataacttgttttcataagctatcctggagagcttatgaaaatgagtttaaaacagggtatgaacatgtcatgaactgttttcataa 478  Q
    |||||||||||   ||||  |||||| |||| ||||| ||| |||| ||||||||| || | |||||||  |||  | ||||||| ||||||||||||||    
T  752956 tttttgtataagctataagctgttttgataaactatcttggggagcatatgaaaattagctaaaaacagcttattgatatgtcataaactgttttcataa 753055  T
Q  479 gttctctcaaacagtctaacaagtgcttatacaag 513  Q
    ||||| |||| |||||| | | |||||||| ||||    
T  753056 gttctttcaatcagtcttagaggtgcttatgcaag 753090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 406 - 507
Target Start/End: Complemental strand, 3836738 - 3836638
Alignment:
Q  406 ataagctatcctggagagcttatgaaaatgagtttaaaacagggtatgaacatgtcatgaactgttttcataagttctctcaaacagtctaacaagtgct 505  Q
    |||||||||| ||||||||| |||||||| |||| || || |  |||| | ||||||| | || ||||||||||||||| |||||||| | |||||||||    
T  3836738 ataagctatcttggagagctaatgaaaataagttgaagacggcttatgta-atgtcataagctattttcataagttctcccaaacagtttcacaagtgct 3836640  T
Q  506 ta 507  Q
    ||    
T  3836639 ta 3836638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 401 - 446
Target Start/End: Original strand, 25596042 - 25596087
Alignment:
Q  401 ttttcataagctatcctggagagcttatgaaaatgagtttaaaaca 446  Q
    ||||||||||||||| |||||||||||||||||| |||| ||||||    
T  25596042 ttttcataagctatcttggagagcttatgaaaataagttgaaaaca 25596087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 407 - 508
Target Start/End: Original strand, 33894642 - 33894743
Alignment:
Q  407 taagctatcctggagagcttatgaaaatgagtttaaaacagggtatgaacatgtcatgaactgttttcataagttctctcaaacagtctaacaagtgctt 506  Q
    |||||||||||||| || ||||  |||| || | ||||||   |||| |||||||||   ||||||||||||| |||| |||||||||| ||||||||||    
T  33894642 taagctatcctggaaagtttattgaaataagctgaaaacaacttatggacatgtcatatgctgttttcataagctctcacaaacagtctcacaagtgctt 33894741  T
Q  507 at 508  Q
    ||    
T  33894742 at 33894743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.000000002
Query Start/End: Original strand, 423 - 508
Target Start/End: Original strand, 44808189 - 44808274
Alignment:
Q  423 gcttatgaaaatgagtttaaaacagggtatgaacatgtcatgaactgttttcataagttctctcaaacagtctaacaagtgcttat 508  Q
    |||||||||||| || | |||||||| |||| ||||||||| |  | |||||||||| ||| ||||||||||| |||| |||||||    
T  44808189 gcttatgaaaataagctgaaaacaggttatggacatgtcataagttattttcataaggtctatcaaacagtctgacaactgcttat 44808274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 310 - 502
Target Start/End: Complemental strand, 5628720 - 5628526
Alignment:
Q  310 agaagtgcttatcatataagcgcttatggataagctatttttataacacaacataaaattaagt--cattgtttttgtataataaataacttgttttcat 407  Q
    ||||| |||||||||| ||| ||||||| ||||||||||||||||||| |  |||||||  |||   | ||||||  | ||| | ||||  |||||||||    
T  5628720 agaagggcttatcatacaagggcttatgcataagctatttttataacaaatgataaaatagagttgaactgttttcatttaagatataagctgttttcat 5628621  T
Q  408 aagctatcctggagagcttatgaaaatgagtttaaaacagggtatgaacatgtcatgaactgtttt-cataagttctctcaaacagtctaacaagt 502  Q
    ||| ||||   |||||||||||||||| ||  | ||||||  |||  ||||||||| ||||||||| | |||| ||||||||| ||||| ||||||    
T  5628620 aagatatcacagagagcttatgaaaataag-ctgaaacagcttatagacatgtcataaactgttttccgtaagatctctcaaatagtctcacaagt 5628526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 399 - 491
Target Start/End: Original strand, 7244687 - 7244779
Alignment:
Q  399 tgttttcataagctatcctggagagcttatgaaaatgagtttaaaacagggtatgaacatgtcatgaactgttttcataagttctctcaaaca 491  Q
    ||||||||||||||||  |||||||||||||||||| || | ||||||   ||||| |||||||| || ||||| ||| || ||| |||||||    
T  7244687 tgttttcataagctatattggagagcttatgaaaataagctgaaaacaacttatgagcatgtcataaattgtttccatcagctctttcaaaca 7244779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 393 - 484
Target Start/End: Original strand, 39967921 - 39968013
Alignment:
Q  393 ataacttgttttcataagctatcctggagagcttatgaaaatgagtttaaaacagggtatgaac-atgtcatgaactgttttcataagttctc 484  Q
    |||| ||||||||||||||||||   |||| || |||||||| |||| |||||||  ||||||| ||| ||| | ||||||||||||||||||    
T  39967921 ataagttgttttcataagctatctgagagaactaatgaaaataagttgaaaacagcttatgaacaatgccataagctgttttcataagttctc 39968013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 398 - 434
Target Start/End: Complemental strand, 48917410 - 48917374
Alignment:
Q  398 ttgttttcataagctatcctggagagcttatgaaaat 434  Q
    |||||||||||||||||| ||||||||||||||||||    
T  48917410 ttgttttcataagctatcttggagagcttatgaaaat 48917374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 379 - 434
Target Start/End: Complemental strand, 3968840 - 3968785
Alignment:
Q  379 tttttgtataataaataacttgttttcataagctatcctggagagcttatgaaaat 434  Q
    ||||||||||||| ||||  | ||||||||||||||||||||||| ||||| ||||    
T  3968840 tttttgtataatatataagctattttcataagctatcctggagagtttatggaaat 3968785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 417 - 508
Target Start/End: Complemental strand, 22387941 - 22387850
Alignment:
Q  417 tggagagcttatgaaaatgagtttaaaacagggtatgaacatgtcatgaactgttttcataagttctctcaaacagtctaacaagtgcttat 508  Q
    ||||||||||||| |||| |||| |||||||  ||| |||||| ||| |  |||||||||||| |||| |||||||||| ||| ||| ||||    
T  22387941 tggagagcttatggaaataagttaaaaacagtttataaacatgccataagttgttttcataagctctcccaaacagtctcacacgtgtttat 22387850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 399 - 434
Target Start/End: Complemental strand, 27378891 - 27378856
Alignment:
Q  399 tgttttcataagctatcctggagagcttatgaaaat 434  Q
    ||||||||||| ||||||||||||||||||||||||    
T  27378891 tgttttcataaactatcctggagagcttatgaaaat 27378856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 316 - 375
Target Start/End: Original strand, 35536029 - 35536088
Alignment:
Q  316 gcttatcatataagcgcttatggataagctatttttataacacaacataaaattaagtca 375  Q
    |||||||||||||  ||||||| ||||||||||| ||||||| || ||||||| ||||||    
T  35536029 gcttatcatataaaggcttatgtataagctatttctataacataagataaaataaagtca 35536088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 318 - 357
Target Start/End: Original strand, 45078217 - 45078256
Alignment:
Q  318 ttatcatataagcgcttatggataagctatttttataaca 357  Q
    |||||||||||| ||||||| |||||||||||||||||||    
T  45078217 ttatcatataagtgcttatgtataagctatttttataaca 45078256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 321 - 428
Target Start/End: Complemental strand, 3610883 - 3610774
Alignment:
Q  321 tcatataagcgcttatggataagctatttttataacacaacataaaattaagtc--attgtttttgtataataaataacttgttttcataagctatcctg 418  Q
    ||||||||| ||||||| ||||||||||| || |||| || ||||||| ||| |  | |||||| ||||||   |||| |||||||| ||| |||||||     
T  3610883 tcatataagtgcttatgtataagctatttctacaacaaaagataaaatgaaggcaaactgttttggtataagctataagttgttttcgtaaactatccta 3610784  T
Q  419 gagagcttat 428  Q
    ||||||||||    
T  3610783 gagagcttat 3610774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 312 - 374
Target Start/End: Original strand, 5373143 - 5373205
Alignment:
Q  312 aagtgcttatcatataagcgcttatggataagctatttttataacacaacataaaattaagtc 374  Q
    ||||||||||||| |||| ||||||| ||| ||||||| ||||||| || ||||||| |||||    
T  5373143 aagtgcttatcatgtaagtgcttatgtatatgctatttctataacaaaagataaaataaagtc 5373205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 454 - 508
Target Start/End: Original strand, 8094368 - 8094422
Alignment:
Q  454 aacatgtcatgaactgttttcataagttctctcaaacagtctaacaagtgcttat 508  Q
    |||||||||| | ||||||||||||  ||||||||| ||||| ||||||||||||    
T  8094368 aacatgtcataagctgttttcataaaatctctcaaatagtctcacaagtgcttat 8094422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 467 - 536
Target Start/End: Complemental strand, 13960718 - 13960648
Alignment:
Q  467 ctgttttcataagttctctcaaacagtctaacaagtgcttatacaa-gaatagcctcaaataagtcaatcc 536  Q
    ||||||||||||| ||||||||| |||||  ||||||||||| ||| | |||  |||||||||||||||||    
T  13960718 ctgttttcataagctctctcaaatagtctcgcaagtgcttatgcaatggataagctcaaataagtcaatcc 13960648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 425 - 483
Target Start/End: Complemental strand, 15740448 - 15740390
Alignment:
Q  425 ttatgaaaatgagtttaaaacagggtatgaacatgtcatgaactgttttcataagttct 483  Q
    |||||||||| |||| |||||||  |||||||||||||| |  ||||||||||||||||    
T  15740448 ttatgaaaataagttaaaaacagcttatgaacatgtcataagttgttttcataagttct 15740390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 339 - 434
Target Start/End: Complemental strand, 17989148 - 17989051
Alignment:
Q  339 ataagctatttttataacacaacataaaattaagtcat--tgtttttgtataataaataacttgttttcataagctatcctggagagcttatgaaaat 434  Q
    |||| ||| |||||||||| || ||||||| ||||||   ||||||  |||||   |||| ||||||||||||||| ||||| |||||||||||||||    
T  17989148 ataaactagttttataacaaaatataaaataaagtcaaactgttttcatataaactataatttgttttcataagctctcctgaagagcttatgaaaat 17989051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 317 - 367
Target Start/End: Complemental strand, 22388051 - 22388001
Alignment:
Q  317 cttatcatataagcgcttatggataagctatttttataacacaacataaaa 367  Q
    |||||||| |||| ||||||||||||||||||| ||||||| || ||||||    
T  22388051 cttatcatttaagtgcttatggataagctatttctataacaaaagataaaa 22388001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 450 - 508
Target Start/End: Original strand, 36537966 - 36538024
Alignment:
Q  450 tatgaacatgtcatgaactgttttcataagttctctcaaacagtctaacaagtgcttat 508  Q
    |||||||||||||| |  ||||| |||||||||||||||||| ||| ||||||| ||||    
T  36537966 tatgaacatgtcataagttgtttccataagttctctcaaacaatctcacaagtgtttat 36538024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 333 - 423
Target Start/End: Original strand, 1417203 - 1417295
Alignment:
Q  333 ttatggataagctatttttataacacaacataaaattaagtca--ttgtttttgtataataaataacttgttttcataagctatcctggagag 423  Q
    ||||| |||| |||||| ||||||| || ||||||| ||||||  |||||||  |||||  ||||| |||||||||||||||| | |||||||    
T  1417203 ttatgtataaactatttatataacaaaagataaaataaagtcaaattgttttcatataagcaataagttgttttcataagctagcatggagag 1417295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 401 - 494
Target Start/End: Complemental strand, 22551466 - 22551373
Alignment:
Q  401 ttttcataagctatcctggagagcttatgaaaatgagtttaaaacagggtatgaacatgtcatgaactgttttcataagttctctcaaacagtc 494  Q
    ||||||||||  ||| ||||||||||||| |||| || | ||||||   | |||||||||||| | ||||||||| ||  ||||||||||||||    
T  22551466 ttttcataagtaatcttggagagcttatgtaaataagctgaaaacaacatttgaacatgtcataagctgttttcaaaatctctctcaaacagtc 22551373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 393 - 434
Target Start/End: Complemental strand, 24363670 - 24363629
Alignment:
Q  393 ataacttgttttcataagctatcctggagagcttatgaaaat 434  Q
    |||| |||||||||||||||||||||||||| ||||| ||||    
T  24363670 ataagttgttttcataagctatcctggagaggttatggaaat 24363629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 401 - 434
Target Start/End: Complemental strand, 30723100 - 30723067
Alignment:
Q  401 ttttcataagctatcctggagagcttatgaaaat 434  Q
    |||||||||||||||||||||||||| |||||||    
T  30723100 ttttcataagctatcctggagagcttttgaaaat 30723067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 318 - 375
Target Start/End: Complemental strand, 45593865 - 45593808
Alignment:
Q  318 ttatcatataagcgcttatggataagctatttttataacacaacataaaattaagtca 375  Q
    |||||||||||  ||||||| ||||||||||| | ||||| |||||||||| ||||||    
T  45593865 ttatcatataaatgcttatgtataagctatttctgtaacaaaacataaaataaagtca 45593808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 393 - 434
Target Start/End: Complemental strand, 46104636 - 46104595
Alignment:
Q  393 ataacttgttttcataagctatcctggagagcttatgaaaat 434  Q
    |||| ||||||||||||||||| ||| |||||||||||||||    
T  46104636 ataagttgttttcataagctatgctgaagagcttatgaaaat 46104595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 37; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 316 - 368
Target Start/End: Complemental strand, 143209 - 143157
Alignment:
Q  316 gcttatcatataagcgcttatggataagctatttttataacacaacataaaat 368  Q
    |||||||||||||||||||||| || |||||||| |||||||||| |||||||    
T  143209 gcttatcatataagcgcttatgaattagctatttctataacacaagataaaat 143157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0590 (Bit Score: 33; Significance: 0.000000008; HSPs: 1)
Name: scaffold0590
Description:

Target: scaffold0590; HSP #1
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 319 - 375
Target Start/End: Complemental strand, 1219 - 1163
Alignment:
Q  319 tatcatataagcgcttatggataagctatttttataacacaacataaaattaagtca 375  Q
    ||||||||||| ||||||| ||||||||||| ||||||| || ||||||| ||||||    
T  1219 tatcatataagtgcttatgtataagctatttctataacaaaagataaaataaagtca 1163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0508 (Bit Score: 33; Significance: 0.000000008; HSPs: 1)
Name: scaffold0508
Description:

Target: scaffold0508; HSP #1
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 315 - 375
Target Start/End: Complemental strand, 9924 - 9864
Alignment:
Q  315 tgcttatcatataagcgcttatggataagctatttttataacacaacataaaattaagtca 375  Q
    ||||||||||||| | ||||||| ||||| ||||| ||||||| || ||||||||||||||    
T  9924 tgcttatcatataggtgcttatgtataagttatttctataacaaaaaataaaattaagtca 9864  T

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Target: scaffold0275 (Bit Score: 33; Significance: 0.000000008; HSPs: 1)
Name: scaffold0275
Description:

Target: scaffold0275; HSP #1
Raw Score: 33; E-Value: 0.000000008
Query Start/End: Original strand, 319 - 375
Target Start/End: Original strand, 2756 - 2812
Alignment:
Q  319 tatcatataagcgcttatggataagctatttttataacacaacataaaattaagtca 375  Q
    ||||||||||| ||||||| ||||||||||| ||||||| || ||||||| ||||||    
T  2756 tatcatataagtgcttatgtataagctatttctataacaaaagataaaataaagtca 2812  T

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Target: scaffold0654 (Bit Score: 31; Significance: 0.0000001; HSPs: 1)
Name: scaffold0654
Description:

Target: scaffold0654; HSP #1
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 317 - 375
Target Start/End: Complemental strand, 6784 - 6726
Alignment:
Q  317 cttatcatataagcgcttatggataagctatttttataacacaacataaaattaagtca 375  Q
    ||||||||||||| ||||||| |||| |||||| ||||||| || ||||| ||||||||    
T  6784 cttatcatataagtgcttatgtataaactatttctataacaaaaaataaacttaagtca 6726  T

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Target: scaffold0014 (Bit Score: 31; Significance: 0.0000001; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 31; E-Value: 0.0000001
Query Start/End: Original strand, 317 - 375
Target Start/End: Complemental strand, 116703 - 116645
Alignment:
Q  317 cttatcatataagcgcttatggataagctatttttataacacaacataaaattaagtca 375  Q
    ||||||||||||| ||||||| |||| |||||| ||||||| || ||||| ||||||||    
T  116703 cttatcatataagtgcttatgtataaactatttctataacaaaaaataaacttaagtca 116645  T

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Target: scaffold0608 (Bit Score: 30; Significance: 0.0000005; HSPs: 1)
Name: scaffold0608
Description:

Target: scaffold0608; HSP #1
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 428 - 493
Target Start/End: Complemental strand, 9671 - 9606
Alignment:
Q  428 tgaaaatgagtttaaaacagggtatgaacatgtcatgaactgttttcataagttctctcaaacagt 493  Q
    ||||||| || | |||||||  ||||||||||| || |  ||||||||||||||||||||||||||    
T  9671 tgaaaataagctaaaaacagcttatgaacatgtaataagttgttttcataagttctctcaaacagt 9606  T

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Target: scaffold0003 (Bit Score: 30; Significance: 0.0000005; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 30; E-Value: 0.0000005
Query Start/End: Original strand, 398 - 479
Target Start/End: Original strand, 306332 - 306413
Alignment:
Q  398 ttgttttcataagctatcctggagagcttatgaaaatgagtttaaaacagggtatgaacatgtcatgaactgttttcataag 479  Q
    |||||||||||||||||||| ||||||||||| || | || | |||||||  ||||  |||||||| | |||||| ||||||    
T  306332 ttgttttcataagctatcctagagagcttatgtaagtaagctgaaaacagcttatgggcatgtcataagctgtttccataag 306413  T

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