View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19289_low_60 (Length: 250)
Name: NF19289_low_60
Description: NF19289
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19289_low_60 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 228; Significance: 1e-126; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 228; E-Value: 1e-126
Query Start/End: Original strand, 11 - 250
Target Start/End: Original strand, 44736069 - 44736308
Alignment:
| Q |
11 |
cagagaacctaggagaggaaaaattggatgatttttccactagctggattttatgcattatataaaatatcttgcacaaatacttaggtgattatcagac |
110 |
Q |
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| T |
44736069 |
cagagaacctaggagaggaaaaattggatgatttttccactagctggattttatgcattatataaaatatcttgcacaaatacttaggtgattatcagac |
44736168 |
T |
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| Q |
111 |
atacactaatgagaaaatacacatttgtaaactggcattcaaaaaagtagtatctcagagaaaatcttaacaaataacatctttgatttcaaaattcaaa |
210 |
Q |
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| T |
44736169 |
atgcactaatgagaaaatacacatttgtaaactggcattcaaaaaagtagtatctcagagaaaatcttaacaaataacatccttgatttcaaaactcaaa |
44736268 |
T |
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| Q |
211 |
cttcaatatagaagtttcaaaatactagtgaacaaggcat |
250 |
Q |
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| T |
44736269 |
cttcaatatagaagtttcaaaatactagtgaacaaggcat |
44736308 |
T |
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