View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19289_low_88 (Length: 207)
Name: NF19289_low_88
Description: NF19289
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19289_low_88 |
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Alignment Details
Target: chr3 (Bit Score: 150; Significance: 2e-79; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 25 - 187
Target Start/End: Original strand, 42177263 - 42177427
Alignment:
| Q |
25 |
gggtgtgagctaccttac--gtattgaaaccttaatgttgaattaaatgaacaatacttccatgctatccactcgagatttacaatacttccatatgttg |
122 |
Q |
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| T |
42177263 |
gggtgtgagcaaccttacatgtattgaaaccttaatgttgaattaaatgaacaatacttccatgctatccactcgagatttacaatacttccatatgttg |
42177362 |
T |
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| Q |
123 |
ataaacaacattttgaagaaaaaagattttttgctgaagaaactacatatttattagccacatat |
187 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
42177363 |
ataaacaacattttgaagaaaaaagattttttgctgaagaaactacatatttattagccacatat |
42177427 |
T |
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