View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19289_low_89 (Length: 202)
Name: NF19289_low_89
Description: NF19289
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19289_low_89 |
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Alignment Details
Target: chr5 (Bit Score: 162; Significance: 1e-86; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 162; E-Value: 1e-86
Query Start/End: Original strand, 17 - 198
Target Start/End: Complemental strand, 35105727 - 35105546
Alignment:
| Q |
17 |
aaacacaaccaaagcaaatcaattcaatttgtttgaaatattgaattgattgaatcattgactagatttcttacacttcttatttgaagattaatctctc |
116 |
Q |
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| T |
35105727 |
aaacacaaccaaagcaaatcaattcaatttgtttgaaatattgaattgattgaatcattgactagatttcttacacttcttatttgaagattaatctctc |
35105628 |
T |
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| Q |
117 |
aatgctggtaacataatttaattggttttaataaacgcttcttagtaagctcgaacttaatacgagaattatctacccacga |
198 |
Q |
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| T |
35105627 |
aatgctggtaacataatttaattggttttaataaacgcttcttggtaagctcgaacttaaaacgagatttatttatccacga |
35105546 |
T |
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