View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19290_high_3 (Length: 314)
Name: NF19290_high_3
Description: NF19290
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19290_high_3 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 254; Significance: 1e-141; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 254; E-Value: 1e-141
Query Start/End: Original strand, 3 - 314
Target Start/End: Original strand, 36952477 - 36952788
Alignment:
| Q |
3 |
tatacatacactcactctctcataatatttctatccaccacctgctcctttaatcacacaaaaatgttcactccatctcttcaaattttctcactaaann |
102 |
Q |
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||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36952477 |
tatacatacacccactctctcataatatttctatccaccacctgctcctttaatcacacaaaaatgttcactccatctcttcaaattttctcactaaaat |
36952576 |
T |
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| Q |
103 |
nnnnnnnnnnnnnnnnttcaaatttaacctcaatcaaactcaaaagaattatccacaccctcttagtttcacacttgtgtagaataattcgtgcactatc |
202 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36952577 |
catcatcatcatcatcttcaaatttaacctcaatcaaactcaaaagaattatccacaccctcttagtttcacacttgtgtagaataattcgtgcactatc |
36952676 |
T |
|
| Q |
203 |
caaagtcaaagattttatagttgagattctcaaagacgacaacaactcaaccatcaacttcacttattacccttcctctcacaaaaaacgtaacaacata |
302 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36952677 |
caaagtcaaagattttatagttgagattctcaaagacgacaacaactcaaccatcaacttcacttattacccttcctctcacaaaaaacgtaacaacata |
36952776 |
T |
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| Q |
303 |
agaaaaaagatc |
314 |
Q |
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|||||||||||| |
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| T |
36952777 |
agaaaaaagatc |
36952788 |
T |
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