View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19290_low_2 (Length: 507)
Name: NF19290_low_2
Description: NF19290
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19290_low_2 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 454; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 454; E-Value: 0
Query Start/End: Original strand, 54 - 507
Target Start/End: Original strand, 44461353 - 44461806
Alignment:
| Q |
54 |
acatcatgacaaaactcttctcggttttggttatctgtgtgattgtattggcacaccaaacagtcgcacaagaaaccaaaggtaaagatttaatcacaag |
153 |
Q |
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| T |
44461353 |
acatcatgacaaaactcttctcggttttggttatctgtgtgattgtattggcacaccaaacagtcgcacaagaaaccaaaggtaaagatttaatcacaag |
44461452 |
T |
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| Q |
154 |
ggtatgccagctagcacagaaaaacagtgacctctgtgttgaagttctgtcatccgacccaaaatccgcaaacgcagacgacattaatgatttggcaatt |
253 |
Q |
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| T |
44461453 |
ggtatgccagctagcacagaaaaacagtgacctctgtgttgaagttctgtcatccgacccaaaatccgcaaacgcagacgacattaatgatttggcaatt |
44461552 |
T |
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| Q |
254 |
atagcactaagagttgctgctagaaatgcttctgcaatgttaaacgacgtgaaatcaatgattgatgatgctaatttagaccctgaagttcaacaaggtt |
353 |
Q |
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| T |
44461553 |
atagcactaagagttgctgctagaaatgcttctgcaatgttaaacgacgtgaaatcaatgattgatgatgctaatttagaccctgaagttcaacaaggtt |
44461652 |
T |
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| Q |
354 |
tggctgattgcaaagaaaatatattggatgctgagtctcaacttgaagacactattgctgctttgttggttgaatctgatgttgatagtcagaaatggtt |
453 |
Q |
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| T |
44461653 |
tggctgattgcaaagaaaatatattggatgctgagtctcaacttgaagacactattgctgctttgttggttgaatctgatgttgatagtcagaaatggtt |
44461752 |
T |
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| Q |
454 |
gaaggctgctttggctgctattactacctgcgataattctattcctggaaatga |
507 |
Q |
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| T |
44461753 |
gaaggctgctttggctgctattactacctgcgataattctattcctggaaatga |
44461806 |
T |
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