View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19291_high_33 (Length: 233)
Name: NF19291_high_33
Description: NF19291
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19291_high_33 |
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Alignment Details
Target: chr2 (Bit Score: 192; Significance: 1e-104; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 16 - 215
Target Start/End: Complemental strand, 16099979 - 16099780
Alignment:
| Q |
16 |
atgaactaccacaaggttaaagctcacatactatccagtctcaagagtcttgtctacaaatcgttccaagcatcaacatatacatcacaattaacaagac |
115 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
16099979 |
atgaactaccacaaggttaaagctcacatactatccagtctcaagagtctcatctacaaatcgttccaagcatcaacatatacatcacaattaacaagac |
16099880 |
T |
|
| Q |
116 |
tttgaccaaatcaaaggtaaaccaaaactcagtggcaaagaaaaaccaaataattgcaacataccaaagcctcatagctaggaccaaattcgtttaacat |
215 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
16099879 |
tttgaccaaatcaaaggtaaaccaaaactcagtggcaaagaaaaaccaaataattgcaacataccaaagcctcatagctaggaccaaattcgtttaacat |
16099780 |
T |
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