View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19291_low_17 (Length: 300)
Name: NF19291_low_17
Description: NF19291
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19291_low_17 |
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Alignment Details
Target: chr7 (Bit Score: 264; Significance: 1e-147; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 264; E-Value: 1e-147
Query Start/End: Original strand, 18 - 293
Target Start/End: Original strand, 47467361 - 47467636
Alignment:
| Q |
18 |
agttgttcctacaacacatgacaggttgcaaagtcatatttgcaacaacaaaaggaatcataattgaggtttcaaaaatttcaaataatttcatgtagtg |
117 |
Q |
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|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
47467361 |
agttgttcctacaacacatgacagtctgcaaagtcatatttgcaacaacaaaaggaatcataattgaggtttcaaaaatttcaaataatttcatgtagtg |
47467460 |
T |
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| Q |
118 |
aatttgtcataacagattgattagtatccttccctgaacattcaaattatacacgggagtaagctccatagatgcctaacttgttgaggtcacaaagtgg |
217 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
47467461 |
aatttgtcataacagattgattagtatccttccctgaacattcaaattatacacgggagtaagctccatagatgcctaacttgttgaggtcacaaagtgg |
47467560 |
T |
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| Q |
218 |
aaagttacttaccagggatgggcactacatcgtctccttgatgaagaatccatgcaagagcaagttgtgatgatgt |
293 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
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| T |
47467561 |
aaagttacttaccagggatgggcactacatcgtctccttgatgaagaatccatgcaagagcaagttgtgaagatgt |
47467636 |
T |
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