View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19291_low_21 (Length: 270)
Name: NF19291_low_21
Description: NF19291
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19291_low_21 |
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Alignment Details
Target: chr7 (Bit Score: 245; Significance: 1e-136; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 245; E-Value: 1e-136
Query Start/End: Original strand, 1 - 254
Target Start/End: Complemental strand, 36527142 - 36526887
Alignment:
| Q |
1 |
gtaattagcagttttaacatatttcaattgctgtttttcccatgcaaaatattactattcaattcaatatcagtatctttgat--gcaatagccaacaat |
98 |
Q |
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| T |
36527142 |
gtaattagcagttttaacatatttcaattgctgtttttcccatgcaaaatattactattcaattcaatatcagtatctttgatatgcaatagccaacaat |
36527043 |
T |
|
| Q |
99 |
caaaattccaatgcatcatctctttgtttcttcataggatttcaaacttcaggttgtctaagggacaactaactaatttactgcgccacttttaaaaagc |
198 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36527042 |
caaaattccaatgcatcatctctttgtttcttcataggatttcaaacttcaggttgtctaagggacaactaactaatttactgcgccacttttaaaaagc |
36526943 |
T |
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| Q |
199 |
tttcattataaattgtaactttcattgtaaatttgtaatgcactttaagaaaaaat |
254 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36526942 |
tttcattataaattgtaactttcattgtaaatttgtaatgcactttaagaaaaaat |
36526887 |
T |
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