View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF19291_low_8 (Length: 428)
Name: NF19291_low_8
Description: NF19291
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19291_low_8 |
 |  |
|
Alignment Details
Target: chr5 (Bit Score: 393; Significance: 0; HSPs: 10)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 393; E-Value: 0
Query Start/End: Original strand, 1 - 413
Target Start/End: Original strand, 30007275 - 30007687
Alignment:
| Q |
1 |
atgaagtaggaaataagagaatggttgaagagaaggatctgaagaattttaattacttagatatgattgttgatgaaaccttaagactttatcctgttgg |
100 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
30007275 |
atgaagtaggaaataaaagaatggttgaagagaaggatctgaagaagtttaattacttagatatggttgttgatgaaaccttaagactttatcctgttgg |
30007374 |
T |
 |
| Q |
101 |
acccttattaatccctcgtgaatgtagagagagcataacaattgatggatattttataacgaaaaagactcgagttatagtaaatgcatgggctattggg |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
30007375 |
acccttattaatccctcgtgaatgtagagagagcataacaattgatggatattttataacgaaaaagactcgagttatagtaaatgcatgggctattggg |
30007474 |
T |
 |
| Q |
201 |
agagattgtaacgtttggtcagaaaatgctgatgaatttcacccagagagatttattgacaagaaaatgaattatcaaggacatgagtttgaatctatac |
300 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
30007475 |
agagattgtaacgtttggtcagaaaatgctgatgaattttacccagagagatttattgacaagaaaatgaattatcaaggacatgagtttgaatctatac |
30007574 |
T |
 |
| Q |
301 |
catttggttctggtcgtaggcgttgtcctggaattcaattgggtttaattatcgttaagttagttatagctcaatttgtgcattgctttaactgggaact |
400 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |
|
|
| T |
30007575 |
catttggttctggtcgtaggcgttgtcctggaattcaattgggtttaattatcgttaagttggttatagctcaatttgtgcattgctttaactgggaact |
30007674 |
T |
 |
| Q |
401 |
tccacataatatt |
413 |
Q |
| |
|
||||||||||||| |
|
|
| T |
30007675 |
tccacataatatt |
30007687 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 277; E-Value: 1e-155
Query Start/End: Original strand, 1 - 413
Target Start/End: Original strand, 30001159 - 30001571
Alignment:
| Q |
1 |
atgaagtaggaaataagagaatggttgaagagaaggatctgaagaattttaattacttagatatgattgttgatgaaaccttaagactttatcctgttgg |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||| |||||| ||||||||||||||||| |||||||| | ||||||||||||||||||||||||||||||| |
|
|
| T |
30001159 |
atgaagtaggaaataagagaatggttgaagaaaaggatttgaagaattttaattacctagatatggtggttgatgaaaccttaagactttatcctgttgc |
30001258 |
T |
 |
| Q |
101 |
acccttattaatccctcgtgaatgtagagagagcataacaattgatggatattttataacgaaaaagactcgagttatagtaaatgcatgggctattggg |
200 |
Q |
| |
|
||| |||||||||||||||||||||||||||| |||||||||||||| |||| ||||| ||||||| ||||||||||||||||||||||| |||||| |
|
|
| T |
30001259 |
acctttattaatccctcgtgaatgtagagagaacataacaattgatgattattctataaaagaaaagacacgagttatagtaaatgcatgggcaattggg |
30001358 |
T |
 |
| Q |
201 |
agagattgtaacgtttggtcagaaaatgctgatgaatttcacccagagagatttattgacaagaaaatgaattatcaaggacatgagtttgaatctatac |
300 |
Q |
| |
|
|||||| | | |||||||||||||||||||| |||||| ||||||||||||||||||| || ||||||||||||| ||||| |||||||||||||||| |
|
|
| T |
30001359 |
agagatcctgatgtttggtcagaaaatgctgaagaattttacccagagagatttattgagaaaaaaatgaattatctcggacaagagtttgaatctatac |
30001458 |
T |
 |
| Q |
301 |
catttggttctggtcgtaggcgttgtcctggaattcaattgggtttaattatcgttaagttagttatagctcaatttgtgcattgctttaactgggaact |
400 |
Q |
| |
|
||||||||||||||||||| |||||||||||||||||||||||| | |||| |||||||| |||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
30001459 |
catttggttctggtcgtagacgttgtcctggaattcaattgggtatgattacggttaagttggttatagctcaattcgtgcattgctttaactgggaact |
30001558 |
T |
 |
| Q |
401 |
tccacataatatt |
413 |
Q |
| |
|
||||||||||||| |
|
|
| T |
30001559 |
tccacataatatt |
30001571 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 233; E-Value: 1e-128
Query Start/End: Original strand, 1 - 413
Target Start/End: Original strand, 29964995 - 29965407
Alignment:
| Q |
1 |
atgaagtaggaaataagagaatggttgaagagaaggatctgaagaattttaattacttagatatgattgttgatgaaaccttaagactttatcctgttgg |
100 |
Q |
| |
|
|||||||||||||||| |||||||| |||||||| ||| ||||||| || ||||||||||||||| | |||||||| || ||||||||||| |||||||| |
|
|
| T |
29964995 |
atgaagtaggaaataaaagaatggtcgaagagaatgatttgaagaagttgaattacttagatatggtggttgatgagacattaagactttaccctgttgg |
29965094 |
T |
 |
| Q |
101 |
acccttattaatccctcgtgaatgtagagagagcataacaattgatggatattttataacgaaaaagactcgagttatagtaaatgcatgggctattggg |
200 |
Q |
| |
|
|||||||||| | ||||||||||||||||| |||||||||||||||||||||||||||| | ||||||| |||||||||||||||||||||||||| ||| |
|
|
| T |
29965095 |
acccttattacttcctcgtgaatgtagagaaagcataacaattgatggatattttataaaggaaaagacacgagttatagtaaatgcatgggctataggg |
29965194 |
T |
 |
| Q |
201 |
agagattgtaacgtttggtcagaaaatgctgatgaatttcacccagagagatttattgacaagaaaatgaattatcaaggacatgagtttgaatctatac |
300 |
Q |
| |
|
||||||| || |||||| |||||| |||||||| ||| | ||||||||||||| ||| ||||||||||||||||||||||| | ||||||||||||| |
|
|
| T |
29965195 |
agagattcaaatatttggttagaaaacgctgatgagttttatccagagagatttagtgataagaaaatgaattatcaaggacagcaatttgaatctatac |
29965294 |
T |
 |
| Q |
301 |
catttggttctggtcgtaggcgttgtcctggaattcaattgggtttaattatcgttaagttagttatagctcaatttgtgcattgctttaactgggaact |
400 |
Q |
| |
|
|||||||||| |||||||| ||||||||||| |||||||||||||| ||| |||| || ||| |||||||||| |||||||||||||| |||||||| |
|
|
| T |
29965295 |
catttggttcaggtcgtagacgttgtcctgggattcaattgggtttggttacggttagatttgttgtagctcaattggtgcattgctttaattgggaact |
29965394 |
T |
 |
| Q |
401 |
tccacataatatt |
413 |
Q |
| |
|
||||||||||||| |
|
|
| T |
29965395 |
tccacataatatt |
29965407 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 233; E-Value: 1e-128
Query Start/End: Original strand, 1 - 413
Target Start/End: Complemental strand, 30009803 - 30009391
Alignment:
| Q |
1 |
atgaagtaggaaataagagaatggttgaagagaaggatctgaagaattttaattacttagatatgattgttgatgaaaccttaagactttatcctgttgg |
100 |
Q |
| |
|
|||||||||||||||| |||||||| |||||||| ||| ||||||| || ||||||||||||||| | |||||||| || ||||||||||| |||||||| |
|
|
| T |
30009803 |
atgaagtaggaaataaaagaatggtcgaagagaatgatttgaagaagttgaattacttagatatggtggttgatgagacattaagactttaccctgttgg |
30009704 |
T |
 |
| Q |
101 |
acccttattaatccctcgtgaatgtagagagagcataacaattgatggatattttataacgaaaaagactcgagttatagtaaatgcatgggctattggg |
200 |
Q |
| |
|
|||||||||| | ||||||||||||||||| |||||||||||||||||||||||||||| | ||||||| |||||||||||||||||||||||||| ||| |
|
|
| T |
30009703 |
acccttattacttcctcgtgaatgtagagaaagcataacaattgatggatattttataaaggaaaagacacgagttatagtaaatgcatgggctataggg |
30009604 |
T |
 |
| Q |
201 |
agagattgtaacgtttggtcagaaaatgctgatgaatttcacccagagagatttattgacaagaaaatgaattatcaaggacatgagtttgaatctatac |
300 |
Q |
| |
|
||||||| || |||||| |||||| |||||||| ||| | ||||||||||||| ||| ||||||||||||||||||||||| | ||||||||||||| |
|
|
| T |
30009603 |
agagattcaaatatttggttagaaaacgctgatgagttttatccagagagatttagtgataagaaaatgaattatcaaggacagcaatttgaatctatac |
30009504 |
T |
 |
| Q |
301 |
catttggttctggtcgtaggcgttgtcctggaattcaattgggtttaattatcgttaagttagttatagctcaatttgtgcattgctttaactgggaact |
400 |
Q |
| |
|
|||||||||| |||||||| ||||||||||| |||||||||||||| ||| |||| || ||| |||||||||| |||||||||||||| |||||||| |
|
|
| T |
30009503 |
catttggttcaggtcgtagacgttgtcctgggattcaattgggtttggttacggttagatttgttgtagctcaattggtgcattgctttaattgggaact |
30009404 |
T |
 |
| Q |
401 |
tccacataatatt |
413 |
Q |
| |
|
||||||||||||| |
|
|
| T |
30009403 |
tccacataatatt |
30009391 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 1 - 413
Target Start/End: Complemental strand, 30043723 - 30043311
Alignment:
| Q |
1 |
atgaagtaggaaataagagaatggttgaagagaaggatctgaagaattttaattacttagatatgattgttgatgaaaccttaagactttatcctgttgg |
100 |
Q |
| |
|
|||||||||||||||| ||||||||| | ||||||||||| ||||| || ||||| ||||||||| | |||||||| |||||||||||||| || || | |
|
|
| T |
30043723 |
atgaagtaggaaataaaagaatggttaacgagaaggatctaaagaagttgaattatttagatatggtggttgatgagaccttaagactttaccccgtagc |
30043624 |
T |
 |
| Q |
101 |
acccttattaatccctcgtgaatgtagagagagcataacaattgatggatattttataacgaaaaagactcgagttatagtaaatgcatgggctattggg |
200 |
Q |
| |
|
||| ||| || |||||||||||| ||||||||||| |||||||||||| |||||||||| | ||||||| ||| ||||||||||||||||||| || ||| |
|
|
| T |
30043623 |
accgttactagtccctcgtgaatctagagagagcacaacaattgatggttattttataaaggaaaagacacgacttatagtaaatgcatgggcaataggg |
30043524 |
T |
 |
| Q |
201 |
agagattgtaacgtttggtcagaaaatgctgatgaatttcacccagagagatttattgacaagaaaatgaattatcaaggacatgagtttgaatctatac |
300 |
Q |
| |
|
|||||| ||| |||||||||||||||||| | |||||| |||||||||||||| | || || ||||||||||||| ||||| |||||||||||||||| |
|
|
| T |
30043523 |
agagatcctaatgtttggtcagaaaatgctaaagaattttacccagagagatttgtagagaaaaaaatgaattatcttggacaagagtttgaatctatac |
30043424 |
T |
 |
| Q |
301 |
catttggttctggtcgtaggcgttgtcctggaattcaattgggtttaattatcgttaagttagttatagctcaatttgtgcattgctttaactgggaact |
400 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| || ||||||||||||||| | ||||| |||||||||||||| |
|
|
| T |
30043423 |
catttggttctggtcgtaggcgttgtcctggaattcaattgggtttaattactgttaaattggttatagctcaatttatccattgttttaactgggaact |
30043324 |
T |
 |
| Q |
401 |
tccacataatatt |
413 |
Q |
| |
|
||||||||||||| |
|
|
| T |
30043323 |
tccacataatatt |
30043311 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 1 - 413
Target Start/End: Complemental strand, 30068240 - 30067828
Alignment:
| Q |
1 |
atgaagtaggaaataagagaatggttgaagagaaggatctgaagaattttaattacttagatatgattgttgatgaaaccttaagactttatcctgttgg |
100 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||||||| ||||||| || ||||||||||||||| | |||||||||||||||||||| |||||||||| |
|
|
| T |
30068240 |
atgaagtaggaaataaaagaatggttgaagagaaggatttgaagaagttgaattacttagatatggtggttgatgaaaccttaagactgtatcctgttgc |
30068141 |
T |
 |
| Q |
101 |
acccttattaatccctcgtgaatgtagagagagcataacaattgatggatattttataacgaaaaagactcgagttatagtaaatgcatgggctattggg |
200 |
Q |
| |
|
||||||| || |||||| | |||||||||||| |||||||||||||| |||||||||| | ||||||| || |||| |||||||||||||| || ||| |
|
|
| T |
30068140 |
acccttactagtccctcctaaatgtagagagaacataacaattgatgattattttataaaggaaaagacgagaattatggtaaatgcatgggcaataggg |
30068041 |
T |
 |
| Q |
201 |
agagattgtaacgtttggtcagaaaatgctgatgaatttcacccagagagatttattgacaagaaaatgaattatcaaggacatgagtttgaatctatac |
300 |
Q |
| |
|
|||||| ||| |||||||||||||||||||| |||||| | ||| ||||||||||||| |||||||||||||||||| |||| ||||||||| | ||| |
|
|
| T |
30068040 |
agagatcctaatgtttggtcagaaaatgctgaagaattttatccaaagagatttattgaaaagaaaatgaattatcaaagacaagagtttgaaagtttac |
30067941 |
T |
 |
| Q |
301 |
catttggttctggtcgtaggcgttgtcctggaattcaattgggtttaattatcgttaagttagttatagctcaatttgtgcattgctttaactgggaact |
400 |
Q |
| |
|
|||||| || ||||||||| ||||| |||||||||||||||||||||| || |||||||| ||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
30067940 |
catttgattatggtcgtagacgttgccctggaattcaattgggtttaactactgttaagttggttatagctcaatttgtgcattgctttaattgggaact |
30067841 |
T |
 |
| Q |
401 |
tccacataatatt |
413 |
Q |
| |
|
| ||||||||||| |
|
|
| T |
30067840 |
ttcacataatatt |
30067828 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 221; E-Value: 1e-121
Query Start/End: Original strand, 1 - 413
Target Start/End: Original strand, 29995486 - 29995897
Alignment:
| Q |
1 |
atgaagtaggaaataagagaatggttgaagagaaggatctgaagaattttaattacttagatatgattgttgatgaaaccttaagactttatcctgttgg |
100 |
Q |
| |
|
|||||||||||||||| |||| | |||| ||||| ||| ||||||| || ||||| ||||||||| | |||||||| |||||||||||||| ||||||| |
|
|
| T |
29995486 |
atgaagtaggaaataaaagaaagattgaggagaaagatatgaagaagttgaattatttagatatggtggttgatgagaccttaagactttaccctgttgc |
29995585 |
T |
 |
| Q |
101 |
acccttattaatccctcgtgaatgtagagagagcataacaattgatggatattttataacgaaaaagactcgagttatagtaaatgcatgggctattggg |
200 |
Q |
| |
|
||| ||| || |||||||||| | ||||||||||| || ||||||||| |||||||||| | ||||||| ||| ||||||||||||||||||| || ||| |
|
|
| T |
29995586 |
accattactagtccctcgtgagtctagagagagcacaataattgatggttattttataaaggaaaagacacgacttatagtaaatgcatgggcaataggg |
29995685 |
T |
 |
| Q |
201 |
agagattgtaacgtttggtcagaaaatgctgatgaatttcacccagagagatttattgacaagaaaatgaattatcaaggacatgagtttgaatctatac |
300 |
Q |
| |
|
|||||| ||| ||||||||||||||||| || |||||| | ||||||||||||||||| || ||| ||||||||| ||||| |||||||||||||||| |
|
|
| T |
29995686 |
agagatcctaatgtttggtcagaaaatgccgaagaattttatccagagagatttattgagaa-aaactgaattatctcggacaagagtttgaatctatac |
29995784 |
T |
 |
| Q |
301 |
catttggttctggtcgtaggcgttgtcctggaattcaattgggtttaattatcgttaagttagttatagctcaatttgtgcattgctttaactgggaact |
400 |
Q |
| |
|
||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
29995785 |
catttggttctagtcgtaggcgttgtcctggaattcaattgggtttaattacgattaagttggttatagctcaatttgtgcattgctttaattgggaact |
29995884 |
T |
 |
| Q |
401 |
tccacataatatt |
413 |
Q |
| |
|
||||||||||||| |
|
|
| T |
29995885 |
tccacataatatt |
29995897 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 1 - 412
Target Start/End: Original strand, 29953727 - 29954138
Alignment:
| Q |
1 |
atgaagtaggaaataagagaatggttgaagagaaggatctgaagaattttaattacttagatatgattgttgatgaaaccttaagactttatcctgttgg |
100 |
Q |
| |
|
|||||||||||||| | |||||| |||||||||| ||| | |||| || | ||||||||| ||| | ||| ||||||| ||||||||||| ||||||| |
|
|
| T |
29953727 |
atgaagtaggaaatgaaagaatgattgaagagaaagatttagagaacttaagttacttagagatggtggttcatgaaactttaagactttaccctgttgc |
29953826 |
T |
 |
| Q |
101 |
acccttattaatccctcgtgaatgtagagagagcataacaattgatggatattttataacgaaaaagactcgagttatagtaaatgcatgggctattggg |
200 |
Q |
| |
|
|||||||||| |||||||||||||||||||||| |||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||| ||| |
|
|
| T |
29953827 |
acccttattactccctcgtgaatgtagagagagtgtaacaattgatggatattttataaaggaaaagactcgagttatagtaaatgcatgggctataggg |
29953926 |
T |
 |
| Q |
201 |
agagattgtaacgtttggtcagaaaatgctgatgaatttcacccagagagatttattgacaagaaaatgaattatcaaggacatgagtttgaatctatac |
300 |
Q |
| |
|
||||||| || ||||||||||||||||| || |||||| ||||||||||||| |||| |||||||||||||||||||||||| |||||||||||| ||| |
|
|
| T |
29953927 |
agagattcaaatgtttggtcagaaaatgccgaagaattttacccagagagattcattggcaagaaaatgaattatcaaggacaagagtttgaatctctac |
29954026 |
T |
 |
| Q |
301 |
catttggttctggtcgtaggcgttgtcctggaattcaattgggtttaattatcgttaagttagttatagctcaatttgtgcattgctttaactgggaact |
400 |
Q |
| |
|
||||||||||||| || || ||||||||||||||||||| ||||||| | | ||||||||| ||||| || ||||| |||||||| ||| | |||||||| |
|
|
| T |
29954027 |
catttggttctggccgcagacgttgtcctggaattcaatcgggtttagtgaccgttaagttggttattgcccaattggtgcattgttttgattgggaact |
29954126 |
T |
 |
| Q |
401 |
tccacataatat |
412 |
Q |
| |
|
|||| ||||||| |
|
|
| T |
29954127 |
tccatataatat |
29954138 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 1 - 413
Target Start/End: Original strand, 29946766 - 29947178
Alignment:
| Q |
1 |
atgaagtaggaaataagagaatggttgaagagaaggatctgaagaattttaattacttagatatgattgttgatgaaaccttaagactttatcctgttgg |
100 |
Q |
| |
|
|||||||||||||||| |||||||| |||||||| ||| | |||| || | ||||||||||||| | ||| ||||||| ||||||||||| ||||||| |
|
|
| T |
29946766 |
atgaagtaggaaataaaagaatggtcgaagagaaagatttagagaagttaagttacttagatatggtggttcatgaaactttaagactttaccctgttgc |
29946865 |
T |
 |
| Q |
101 |
acccttattaatccctcgtgaatgtagagagagcataacaattgatggatattttataacgaaaaagactcgagttatagtaaatgcatgggctattggg |
200 |
Q |
| |
|
|||||| ||| |||||||||||||||||||||| ||||||||||||||||||||||||| | ||||||| |||||||||||||||||||||||||| | | |
|
|
| T |
29946866 |
acccttgttactccctcgtgaatgtagagagagtataacaattgatggatattttataatggaaaagacacgagttatagtaaatgcatgggctatagag |
29946965 |
T |
 |
| Q |
201 |
agagattgtaacgtttggtcagaaaatgctgatgaatttcacccagagagatttattgacaagaaaatgaattatcaaggacatgagtttgaatctatac |
300 |
Q |
| |
|
||||||| || ||||||||||||||| ||| |||||||| ||||| ||||||||||||| ||||||||||||| |||||||| ||||| ||||||||| |
|
|
| T |
29946966 |
agagattctagtgtttggtcagaaaattatgaagaatttcatccagaaagatttattgacatgaaaatgaattatgaaggacataagtttaaatctatac |
29947065 |
T |
 |
| Q |
301 |
catttggttctggtcgtaggcgttgtcctggaattcaattgggtttaattatcgttaagttagttatagctcaatttgtgcattgctttaactgggaact |
400 |
Q |
| |
|
||||||||||||||||||| ||||||||||||||| || ||||||| || | |||| | |||||||||||||| || ||||||||||| |||||||| |
|
|
| T |
29947066 |
catttggttctggtcgtagacgttgtcctggaattgaaatgggtttgatcacaattaaaatggttatagctcaattggtacattgctttaattgggaact |
29947165 |
T |
 |
| Q |
401 |
tccacataatatt |
413 |
Q |
| |
|
|||| ||||||| |
|
|
| T |
29947166 |
tccatgtaatatt |
29947178 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #10
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 1 - 413
Target Start/End: Original strand, 29944794 - 29945206
Alignment:
| Q |
1 |
atgaagtaggaaataagagaatggttgaagagaaggatctgaagaattttaattacttagatatgattgttgatgaaaccttaagactttatcctgttgg |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||| | ||||||||||| ||||||||| |||| ||| |
|
|
| T |
29944794 |
atgaagtaggaaataagagaatggttgaagaaaaggatttgaagaattttaattacttagatatggtggttgatgaaactttaagacttcatccagtttc |
29944893 |
T |
 |
| Q |
101 |
acccttattaatccctcgtgaatgtagagagagcataacaattgatggatattttataacgaaaaagactcgagttatagtaaatgcatgggctattggg |
200 |
Q |
| |
|
|||||| ||| ||||||||||||||||||||| ||||||||||||||| |||||| ||| | ||||||| ||||||||||||||||||| | || | | |
|
|
| T |
29944894 |
acccttcttactccctcgtgaatgtagagagaacataacaattgatggttattttgtaaaggaaaagacacgagttatagtaaatgcatttacaatagcg |
29944993 |
T |
 |
| Q |
201 |
agagattgtaacgtttggtcagaaaatgctgatgaatttcacccagagagatttattgacaagaaaatgaattatcaaggacatgagtttgaatctatac |
300 |
Q |
| |
|
|||||| ||| |||||||||||||||||||| |||||| |||||||| |||||| | |||||| |||||||| ||||||| ||||||||| ||||| |
|
|
| T |
29944994 |
agagatcctaatgtttggtcagaaaatgctgaagaattttgtccagagaggtttattaataagaaattgaattatgaaggacaagagtttgaaagtatac |
29945093 |
T |
 |
| Q |
301 |
catttggttctggtcgtaggcgttgtcctggaattcaattgggtttaattatcgttaagttagttatagctcaatttgtgcattgctttaactgggaact |
400 |
Q |
| |
|
||||||| | ||||||||||||||| |||||||||||||||| ||| | | |||| |||| ||||||||||| |||||||||||||| ||| |||| |
|
|
| T |
29945094 |
catttggatttggtcgtaggcgttgccctggaattcaattggctttgaggactgttaggttaagcatagctcaattggtgcattgctttaattggaaact |
29945193 |
T |
 |
| Q |
401 |
tccacataatatt |
413 |
Q |
| |
|
|||| |||||||| |
|
|
| T |
29945194 |
tccatataatatt |
29945206 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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