View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19292_high_15 (Length: 237)
Name: NF19292_high_15
Description: NF19292
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19292_high_15 |
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Alignment Details
Target: chr4 (Bit Score: 195; Significance: 1e-106; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 1 - 213
Target Start/End: Original strand, 23211402 - 23211611
Alignment:
| Q |
1 |
cgagaagaacagcctcttcattgtaccaaaaagataaaaagcctcttcatgccttttgtgtgtactcttcattttgctttaatttggaaatctactcctt |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
23211402 |
cgagaagaacagcctcttcattgtaccaaaaagataaaaagcctcttcatgccttttgtgtgtactcttcattttgctttaatttggaaatctactcctt |
23211501 |
T |
|
| Q |
101 |
ctgaccaatttatgagaagaaaggtaaccatgtgaaatcaacgagaattttatgcacttctctctctgtgattgatttattttaattattattactggtc |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||| |
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| T |
23211502 |
ctgaccaatttatgagaagaaaggtaaccatgtgaaatcaacgagaattttatgcaattctctctctgtgattgatttatttta---attattactggtc |
23211598 |
T |
|
| Q |
201 |
agctagtatgttt |
213 |
Q |
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||||||||||||| |
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| T |
23211599 |
agctagtatgttt |
23211611 |
T |
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