View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19292_low_20 (Length: 217)
Name: NF19292_low_20
Description: NF19292
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19292_low_20 |
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Alignment Details
Target: chr1 (Bit Score: 201; Significance: 1e-110; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 201; E-Value: 1e-110
Query Start/End: Original strand, 1 - 201
Target Start/End: Original strand, 26597778 - 26597978
Alignment:
| Q |
1 |
gaatctgacagctttgttaactactactcatccacagacacatcaaaaccagtatgagatgatgatgttagggcgtggagtagttcttgaagatttcaat |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
26597778 |
gaatctgacagctttgttaactactactcatccacagacacatcaaaaccagtatgagatgatgatgttagggcgtggagtagttcttgaagatttcaat |
26597877 |
T |
|
| Q |
101 |
agtatcactactcatgtaccaccaccaccttcaacaacaataacaacagcaaccaccactgctagtgctagtgtttcaactcctgagaccacaggttata |
200 |
Q |
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|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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|
| T |
26597878 |
agtatcactactcatgtaccaccaccaccttcaacaacaataacaacagcaaccaccactgctagtgctagtgtttcaactcctgagaccacaggttata |
26597977 |
T |
|
| Q |
201 |
t |
201 |
Q |
| |
|
| |
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|
| T |
26597978 |
t |
26597978 |
T |
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