View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19292_low_8 (Length: 334)
Name: NF19292_low_8
Description: NF19292
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19292_low_8 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 292; Significance: 1e-164; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 292; E-Value: 1e-164
Query Start/End: Original strand, 19 - 334
Target Start/End: Original strand, 40658899 - 40659214
Alignment:
| Q |
19 |
cttcgtgctgtaacatcaggaaatccaattcgggatgacactgacccctgctaaaccactttcaaccatggtaattaagttcctcgaaaggttgtcacag |
118 |
Q |
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| T |
40658899 |
cttcgtgttgtaacatcaggaaatccaattcgggatgacactgacccctgctaaaccactttcaaccatggtaattaagttcctcgaaaggttgtcacag |
40658998 |
T |
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| Q |
119 |
gtatcccaatgacagtgtgacatgtgtccatgttcgatgacatcaacgtcgttatctccaatctgacggagatgttgattatggcatgtcccctggaacc |
218 |
Q |
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| T |
40658999 |
gtatcccaatgacagtgtgacatgtgtccatgttcgatgacatcaatgtcgttatctccaatctgacggagatgttgattatggcatgtcccctggaacc |
40659098 |
T |
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| Q |
219 |
gtctttacctcgtagccggtaactcaggtaccgaactgagccaggtgtaagaaggccgatatctgaagcgggaataaaacaccacccaagttgagcctgc |
318 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |
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| T |
40659099 |
gtctttacctcgtagccggtaactcaggtaccgaactgagccaggtgtaagaaggccgatatctgaagccggaataaaacaccacccaagttgagcctgc |
40659198 |
T |
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| Q |
319 |
cctatgcttctcctct |
334 |
Q |
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| T |
40659199 |
cccatgattcttctct |
40659214 |
T |
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