View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19295_high_12 (Length: 237)
Name: NF19295_high_12
Description: NF19295
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19295_high_12 |
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Alignment Details
Target: chr4 (Bit Score: 208; Significance: 1e-114; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 1 - 216
Target Start/End: Complemental strand, 20100495 - 20100280
Alignment:
| Q |
1 |
cttaagggtgaattttagccactaggttacttgacaaacaacaaaaggattattaaatgagtgtctagttaagtttacctaaatctaaatgccattttaa |
100 |
Q |
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| T |
20100495 |
cttaagggtgaattttagccactaggttacttgacaaacaacaaaaggattattaaatgagtgtctagttaagtttacctaaatctaaatgccattttaa |
20100396 |
T |
|
| Q |
101 |
atggttgtgttttgtgtcattcataagaccaatcatgctaagtcagtgtctcagttgtcctgaatttttctttttctcataacaacaattcaaaatactg |
200 |
Q |
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|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
20100395 |
atggttgtgttttgtgtcattcataaaaccaatcatgctaagtcagtgtctcagttgtcctgaatttttctttttctcataacaacaattcaaaatactg |
20100296 |
T |
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| Q |
201 |
atgctttagactgctg |
216 |
Q |
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||| |||||||||||| |
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| T |
20100295 |
atgatttagactgctg |
20100280 |
T |
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