View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF19296_high_5 (Length: 441)
Name: NF19296_high_5
Description: NF19296
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF19296_high_5 |
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Alignment Details
Target: chr6 (Bit Score: 423; Significance: 0; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 423; E-Value: 0
Query Start/End: Original strand, 1 - 423
Target Start/End: Complemental strand, 29006447 - 29006025
Alignment:
| Q |
1 |
attgctagtttgcttcaacttgttcctattctatagcttcaggtccacacaacatacttgtgccataacaacgtgtccaagcattttgtgagttgtttcc |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
29006447 |
attgctagtttgcttcaacttgttcctattctatagcttcaggtccacacaacatacttgtgccataacaacgtgtccaagcattttgtgagttgtttcc |
29006348 |
T |
|
| Q |
101 |
attagtgtttaataagaaaagagacatgtcatttataatggcaaacatgattgagtcttattcttaggtcatctacctagcacattcttcttaatgaata |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
29006347 |
attagtgtttaataagaaaagagacatgtcatttataatggcaaacatgattgagtcttattcttaggtcatctacctagcacattcttcttaatgaata |
29006248 |
T |
|
| Q |
201 |
tttagacattattatcaccataaacaacaggtatgtagacaactggtgtcaattaaagctccaacttgcttcttgaccccctgacccttgtctttggatt |
300 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
29006247 |
tttagacattattatcaccataaacaacaggtatgtagacaactggtgtcaattaaagctccaacttgcttcttgaccccctgacccttgtctttggatt |
29006148 |
T |
|
| Q |
301 |
cattatttattttttatgtcggggccactaggaatcagagttacatttgtttgctttatgtgacaacttctcattcttagtttgatatgagatgtatagt |
400 |
Q |
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|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
29006147 |
cattatttattttttatgtcggggccactaggaatcagagttacatttgtttgctttatgtgacaacttctcattcttagtttgatatgagatgtatagt |
29006048 |
T |
|
| Q |
401 |
atgggtatttggaggtgcctatg |
423 |
Q |
| |
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||||||||||||||||||||||| |
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| T |
29006047 |
atgggtatttggaggtgcctatg |
29006025 |
T |
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